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Homologs of l0013 gene of AJ488511

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EcE24377A_4882
( - )

NC_009801
(Escherichia coli E24377A)

e-203

98.9

2) SeD_B0059
( - )

NC_011204
(Salmonella enterica CT_02021853)

6e-71

87.9

• Sequence Alignments

1) EcE24377A_4882 in NC_009801


>AJ488511|69|G63|24528047|CAD33777.1|Escherichia_coli_536|-|66647..67027|l0013|-|L0013 
          Length = 381

 Score = 704 bits (1815), Expect = e-203
 Identities = 360/364 (99%)
 Strand = Plus / Plus

Query: 1   atgcagaaaaatgtgactcccggcaggtgaaaaggctgccctaattatcctcccgaattt 60
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 1   atgcagaaaaatgtgactcccggcagacgaaaaggctgccctaattatcctcccgaattt 60

Query: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120

Query: 121 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 180

Query: 181 ctgctattaccttcttcagagagcccccagctacttcctgtgactcccgatgcagctgcc 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 ctgctattaccttcttcagagagcccccagctacttcctgtgactctcgatgcagctgcc 240

Query: 241 gaacagccagaatcgctcgcagaggacccggaaaccctcagtatcagctgtgaggtaacg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacagccagaatcgctcgcagaggacccggaaaccctcagtatcagctgtgaggtaacg 300

Query: 301 ttccggcacgggacgctccgcttcaatggcaatgtcagcgaaaagctcctgactctgctg 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 ttccggcacgggacgctccgcttcaatggcaatgtcaacgaaaagctcctgactctgctg 360

Query: 361 atac 364
           ||||
Sbjct: 361 atac 364

2) SeD_B0059 in NC_011204


>AJ488511|69|G63|24528047|CAD33777.1|Escherichia_coli_536|-|66647..67027|l0013|-|L0013 
          Length = 381

 Score = 265 bits (683), Expect = 6e-71
 Identities = 148/174 (85%)
 Strand = Plus / Plus

Query: 192 cagctactccctgtgactctcaatgccacctccgtacagccagaactaaccgctgaaggc 251
           |||||||| |||||||||||| ||||  |  ||| ||||||||||     ||| || | |
Sbjct: 208 cagctacttcctgtgactctcgatgcagctgccgaacagccagaatcgctcgcagaggac 267

Query: 252 ccggaggttctcagtatcagctgtgaggcaacgttctggcacgggacgcttcgcctcaac 311
           |||||    ||||||||||||||||||| ||||||| ||||||||||||| ||| |||| 
Sbjct: 268 ccggaaaccctcagtatcagctgtgaggtaacgttccggcacgggacgctccgcttcaat 327

Query: 312 ggcactgtcagcgaaaagctcctgactctgctgatacaggaactgaagcgatga 365
           |||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggcaatgtcaacgaaaagctcctgactctgctgatacaggaactgaagcgatga 381


 Score = 243 bits (627), Expect = 2e-64
 Identities = 135/151 (89%)
 Strand = Plus / Plus

Query: 10  atgcagaaaaatgtgactcccggcaggcgtaagggctgccctaattattctcctgagttt 69
           |||||||||||||||||||||||||| || || ||||||||||||||| |||| || |||
Sbjct: 1   atgcagaaaaatgtgactcccggcagacgaaaaggctgccctaattatcctcccgaattt 60

Query: 70  aagcagcagcttgttgcggcctcctgcgaacccggcttatccatctcaaaactggcgctt 129
           || |||||||| ||||| |||||||| ||||||||  |||||||||||||||| || |||
Sbjct: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120

Query: 130 gaaaacggcattaacgccaatctgttgttta 160
           ||||| ||||||||||||||||||||||| |
Sbjct: 121 gaaaatggcattaacgccaatctgttgttca 151


 Score = 56 bits (145), Expect = 4e-08
 Identities = 29/30 (97%)
 Strand = Plus / Plus

Query: 161 aatggcgcaagggaaagctgctattacctt 190
           |||||||| |||||||||||||||||||||
Sbjct: 164 aatggcgcgagggaaagctgctattacctt 193