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Homologs of merR gene of AB037671

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SABB_01780
( YP_008167218.1 )

putative regulatory protein

NC_021670
(Staphylococcus aureus Bmb9393)

0.0

100

2) SE0080
( NP_763635.1 )

regulatory protein

NC_004461
(Staphylococcus epidermidis ATCC 12228)

0.0

100

3) SATW20_00550
( YP_005730079.1 )

NADH-binding protein

NC_017331
(Staphylococcus aureus TW20)

0.0

100

4) ACP_1229
( YP_002754326.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_012483
(Acidobacterium capsulatum ATCC 51196)

4e-115

5) Metev_0755
( YP_003726452.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_014253
(Methanohalobium evestigatum Z-7303)

1e-108

6) merA
( YP_861168.1 )

mercuric reductase

NC_008571
(Gramella forsetii KT0803)

6e-108

7) RB2501_04890
( YP_003193985.1 )

regulatory protein

NC_013222
(Robiginitalea biformata HTCC2501)

6e-108

8) ZPR_4028
( YP_003586528.1 )

glutathione reductase

NC_014041
(Zunongwangia profunda SMA-87)

1e-107

9) Xaut_2904
( YP_001417798.1 )

pyridine nucleotide-disulfide oxidoreductase dimerisation region

NC_009720
(Xanthobacter autotrophicus Py2)

2e-106

10) gor
( YP_861364.1 )

glutathione reductase

NC_008571
(Gramella forsetii KT0803)

2e-106

11) Slin_1435
( YP_003386284.1 )

pyridine nucleotide-disulfide oxidoreductase dimerisation subunit

NC_013730
(Spirosoma linguale DSM 74)

2e-106

12) DDD_0677
( YP_007375825.1 )

regulatory protein

NC_020156
(Nonlabens dokdonensis DSW-6)

2e-105

13) Xaut_0796
( YP_001415704.1 )

pyridine nucleotide-disulfide oxidoreductase dimerisation region

NC_009720
(Xanthobacter autotrophicus Py2)

4e-105

14) Echvi_4146
( YP_007226357.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component

NC_019904
(Echinicola vietnamensis DSM 17526)

7e-105

15) Ftrac_2118
( YP_004054208.1 )

fad-dependent pyridine nucleotide-disulfide oxidoreductase

NC_014759
(Marivirga tractuosa DSM 4126)

9e-105

16) Cycma_4529
( YP_004776452.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_015914
(Cyclobacterium marinum DSM 745)

3e-104

17) gll4201
( NP_927147.1 )

glutathione reductase

NC_005125
(Gloeobacter violaceus PCC 7421)

4e-103

18) R2APBS1_3790
( YP_007592083.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component

NC_020541
(Rhodanobacter sp. 2APBS1)

7e-102

19) Ftrac_1225
( YP_004053326.1 )

fad-dependent pyridine nucleotide-disulfide oxidoreductase

NC_014759
(Marivirga tractuosa DSM 4126)

1e-101

20) HYPDE_27253
( YP_007913629.1 )

pyridine nucleotide-disulfide oxidoreductase dimerization region

NC_021172
(Hyphomicrobium denitrificans 1NES1)

3e-100

21) Noca_1648
( YP_922848.1 )

pyridine nucleotide-disulfide oxidoreductase dimerisation region

NC_008699
(Nocardioides sp. JS614)

1e-99

22) Memar_0358
( YP_001046273.1 )

pyridine nucleotide-disulphide oxidoreductase dimerisation region

NC_009051
(Methanoculleus marisnigri JR1)

4e-98

23) Mmah_0399
( YP_003541576.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_014002
(Methanohalophilus mahii DSM 5219)

9e-98

24) BN140_1541
( YP_006545180.1 )

glutathione reductase (NADPH)

NC_018227
(Methanoculleus bourgensis MS2)

1e-97

25) Flexsi_1327
( YP_004603546.1 )

dihydrolipoyl dehydrogenase

NC_015672
(Flexistipes sinusarabici DSM 4947)

1e-97

26) MAB_p09
( YP_001700707.1 )

Probable FAD-dependent pyridine nucleotide-disulphide oxidoreductase

NC_010394
(Mycobacterium abscessus ATCC 19977)

3e-95

27) MMAR_p09
( YP_001840836.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_010604
(Mycobacterium marinum M)

3e-95

28) lin1472
( NP_470808.1 )

hypothetical protein

NC_003212
(Listeria innocua Clip11262)

3e-95

29) gor
( YP_863167.1 )

glutathione reductase

NC_008571
(Gramella forsetii KT0803)

1e-94

30) lwe1450
( YP_849647.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_008555
(Listeria welshimeri SLCC5334)

3e-94

31) MexAM1_META1p2630
( YP_002963677.1 )

hypothetical protein

NC_012808
(Methylobacterium extorquens AM1)

5e-94

32) Mpsy_2263
( YP_006923835.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_018876
(Methanolobus psychrophilus R15)

1e-93

33) Aeqsu_1152
( YP_006417663.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component

NC_018013
(Aequorivita sublithincola DSM 14238)

2e-93

34) Mzhil_1636
( YP_004616691.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_015676
(Methanosalsum zhilinae DSM 4017)

4e-93

35) M642_05100
( YP_008271883.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021823
(Listeria monocytogenes C1-387)

3e-92

36) LMLG_1691
( YP_005971244.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_017547
(Listeria monocytogenes Finland 1988)

3e-92

37) M639_10160
( YP_008296594.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021837
(Listeria monocytogenes J2-031)

4e-92

38) BN418_1682
( YP_007603782.1 )

Glutathione reductase

NC_020557
(Listeria monocytogenes La111)

4e-92

39) BN419_1677
( YP_007606909.1 )

Glutathione reductase

NC_020558
(Listeria monocytogenes N53-1)

4e-92

40) LM5578_1574
( YP_003413684.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

5e-92

41) LM5923_1526
( YP_003416729.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

5e-92

42) lmo1433
( NP_464958.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

1e-91

43) LMKG_00782
( YP_005968400.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_017546
(Listeria monocytogenes FSL R2-561)

1e-91

44) gshR
( YP_006684821.1 )

glutathione reductase

NC_018588
(Listeria monocytogenes SLCC2372)

1e-91

45) gshR
( YP_006687756.1 )

glutathione reductase

NC_018589
(Listeria monocytogenes SLCC2479)

1e-91

46) gshR
( YP_006690587.1 )

glutathione reductase

NC_018590
(Listeria monocytogenes SLCC2376)

8e-92

47) M643_01650
( YP_008279930.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021826
(Listeria monocytogenes N1-011A)

1e-91

48) M641_06315
( YP_008298774.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021838
(Listeria monocytogenes R2-502)

1e-91

49) gshR
( YP_006693441.1 )

glutathione reductase

NC_018591
(Listeria monocytogenes SLCC2482)

1e-91

50) gshR
( YP_006679055.1 )

glutathione reductase

NC_018586
(Listeria monocytogenes SLCC2540)

1e-91

51) gshR
( YP_006681888.1 )

glutathione reductase

NC_018587
(Listeria monocytogenes SLCC2755)

1e-91

52) LIV_1392
( YP_004855149.1 )

putative glutathione reductase

NC_016011
(Listeria ivanovii PAM 55)

1e-91

53) gshR
( YP_006673243.1 )

glutathione reductase

NC_018584
(Listeria monocytogenes ATCC 19117)

1e-91

54) LMOG_00268
( YP_005965417.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_017545
(Listeria monocytogenes J0161)

1e-91

55) LM220_19550
( YP_008289682.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021830
(Listeria monocytogenes J1-220)

1e-91

56) M640_06135
( YP_008301773.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021839
(Listeria monocytogenes J1776)

1e-91

57) LM1816_17710
( YP_008288102.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021829
(Listeria monocytogenes J1816)

1e-91

58) M644_08790
( YP_008284349.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021827
(Listeria monocytogenes J1817)

1e-91

59) M645_06670
( YP_008304765.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021840
(Listeria monocytogenes J1926)

1e-91

60) RB4396
( NP_866074.1 )

glutathione reductase

NC_005027
(Rhodopirellula baltica SH 1)

1e-91

61) MUO_07390
( YP_006205668.1 )

glutathione reductase

NC_017728
(Listeria monocytogenes 07PF0776)

2e-91

62) Lm4b_01443
( YP_002758141.1 )

glutathione reductase

NC_012488
(Listeria monocytogenes Clip81459)

2e-91

63) M637_10145
( YP_008275824.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021824
(Listeria monocytogenes J2-064)

2e-91

64) gshR
( YP_006754560.1 )

glutathione reductase

NC_018642
(Listeria monocytogenes L312)

2e-91

65) LMRG_00885
( YP_005962549.1 )

glutathione reductase

NC_017544
(Listeria monocytogenes 10403S)

2e-91

66) gshR
( YP_006696319.1 )

glutathione reductase

NC_018592
(Listeria monocytogenes SLCC5850)

2e-91

67) PB2503_12394
( YP_003855663.1 )

regulatory protein

NC_014414
(Parvularcula bermudensis HTCC2503)

3e-91

68) gshR
( YP_006699098.1 )

glutathione reductase

NC_018593
(Listeria monocytogenes SLCC7179)

5e-91

69) LMOf2365_1452
( YP_014050.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_002973
(Listeria monocytogenes F2365)

8e-91

70) M638_09880
( YP_008278615.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_021825
(Listeria monocytogenes J2-1091)

8e-91

71) gor_2
( YP_007015024.1 )

Glutathione reductase

NC_019556
(Listeria monocytogenes LL195)

8e-91

72) gshR
( YP_006676118.1 )

glutathione reductase

NC_018585
(Listeria monocytogenes SLCC2378)

8e-91

73) ZPR_4602
( YP_003587098.1 )

glutathione reductase

NC_014041
(Zunongwangia profunda SMA-87)

9e-91

74) LMHCC_1135
( YP_002350097.1 )

pyridine nucleotide-disulfide oxidoreductase family protein

NC_011660
(Listeria monocytogenes HCC23)

1e-90

75) gshR
( YP_005926484.1 )

glutathione reductase

NC_017529
(Listeria monocytogenes L99)

1e-90

76) gor
( YP_005947583.1 )

putative glutathione reductase

NC_017537
(Listeria monocytogenes M7)

1e-90

77) Mpal_0666
( YP_002465757.1 )

pyridine nucleotide-disulfide oxidoreductase dimerisation subunit

NC_011832
(Methanosphaerula palustris E1-9c)

6e-90

78) PHZ_c1498
( YP_002130338.1 )

regulatory protein

NC_011144
(Phenylobacterium zucineum HLK1)

2e-89

79) gorA
( YP_004736546.1 )

glutathione reductase

NC_015844
(Zobellia galactanivorans DsiJT)

9e-90

80) lse_1352
( YP_003464589.1 )

pyridine nucleotide-disulfide oxidoreductase

NC_013891
(Listeria seeligeri SLCC3954)

3e-89

81) Celal_1877
( YP_004164675.1 )

dihydrolipoyl dehydrogenase

NC_014934
(Cellulophaga algicola DSM 14237)

4e-89

82) Krodi_1025
( YP_004430277.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_015496
(Krokinobacter sp. 4H-3-7-5)

1e-88

83) gor
( NP_618883.1 )

glutathione reductase (NADPH)

NC_003552
(Methanosarcina acetivorans C2A)

7e-89

84) Dret_1336
( YP_003198202.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_013223
(Desulfohalobium retbaense DSM 5692)

8e-89

85) ELI_09980
( YP_458885.1 )

regulatory protein

NC_007722
(Erythrobacter litoralis HTCC2594)

7e-88

86) PP1Y_AT14593
( YP_004534174.1 )

regulatory protein

NC_015580
(Novosphingobium sp. PP1Y)

1e-86

87) R2APBS1_2079
( YP_007590436.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component

NC_020541
(Rhodanobacter sp. 2APBS1)

7e-86

88) Mbar_A0570
( YP_304130.1 )

glutathione reductase (NADPH)

NC_007355
(Methanosarcina barkeri Fusaro)

2e-84

89) MED152_07885
( YP_007671581.1 )

dihydrolipoamide dehydrogenase

NC_020830
(Polaribacter sp. MED152)

2e-83

90) CA2559_02575
( YP_003715281.1 )

regulatory protein

NC_014230
(Croceibacter atlanticus HTCC2559)

7e-83

91) Dbac_1885
( YP_003158392.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_013173
(Desulfomicrobium baculatum DSM 4028)

4e-81

92) Exig_2162
( YP_001814631.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_010556
(Exiguobacterium sibiricum 255-15)

4e-79

93) Desaf_0754
( YP_005050764.1 )

Glutathione-disulfide reductase

NC_016629
(Desulfovibrio africanus Walvis Bay)

2e-78

94) Mbar_A3561
( YP_307010.1 )

glutathione reductase (NADPH)

NC_007355
(Methanosarcina barkeri Fusaro)

3e-78

95) Dacet_1815
( YP_003504535.1 )

FAD-dependent pyridine nucleotide-disulfide oxidoreductase

NC_013943
(Denitrovibrio acetiphilus DSM 12809)

2e-77

96) MA1019
( NP_615969.1 )

glutathione reductase (NADPH)

NC_003552
(Methanosarcina acetivorans C2A)

3e-77

97) MM_0897
( NP_632921.1 )

glutathione reductase

NC_003901
(Methanosarcina mazei Go1)

8e-66

• Sequence Alignments

1) SABB_01780 in NC_021670


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  733 bits (2773),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 449/449 (100%), Positives = 449/449 (100%), Gaps = 0/449 (0%)

Query  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60
            MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120
            IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180
            KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240
            FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HVYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300
            HVYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360
            AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420
            KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449
            AIRFGISTKELKQMIFAYPTAASDIAHML
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

2) SE0080 in NC_004461


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  733 bits (2774),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 449/449 (100%), Positives = 449/449 (100%), Gaps = 0/449 (0%)

Query  5    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  64
            MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  65   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  124
            IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  125  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  184
            KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  185  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  244
            FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  245  HVYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  304
            HVYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  305  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  364
            AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  365  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  424
            KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  425  AIRFGISTKELKQMIFAYPTAASDIAHML  453
            AIRFGISTKELKQMIFAYPTAASDIAHML
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

3) SATW20_00550 in NC_017331


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 448/448 (100%), Positives = 448/448 (100%), Gaps = 0/448 (0%)

Query  1    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  60
            MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  120
            DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  180
            LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  240
            AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  241  VYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAA  300
            VYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAA
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAA  301

Query  301  GDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAK  360
            GDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAK
Sbjct  302  GDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAK  361

Query  361  NSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA  420
            NSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA
Sbjct  362  NSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA  421

Query  421  IRFGISTKELKQMIFAYPTAASDIAHML  448
            IRFGISTKELKQMIFAYPTAASDIAHML
Sbjct  422  IRFGISTKELKQMIFAYPTAASDIAHML  449

4) ACP_1229 in NC_012483


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  407 bits (1533),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 234/450 (52%), Positives = 346/450 (77%), Gaps = 2/450 (0%)

Query  1    MNKQFDLIAIGTGsaassvasrcraaDWQVAVIDSRPFGGTCALRGCDPKKVLVGAAELI  60
            M K++DLI IGTGSA+S  A++C  A+W+VA++D RPFGGTCALRGCDPKKVL GAAELI
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DWGRRMQGKGIQAGELKINWRELMHFKRTFTEPVPKHREEGFRKAGIEAFHGRARFTGPT  120
            DW +RM  +G+ ++E+ INW++LM+FKRTFT+ VP  +EE++ K GI+++HG A F +  
Sbjct  62   DWNKRMVKNGV-PSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SIQVGEDTLEARHIVIAAGQKPADLKIPGSEHLIDSEHFLELDSLPSRILFIGGGYIAFE  180
             ++V  + LE+ H++IA+G KP+ L I G EHL  S++FLELD LP RI+F+GGGYI+FE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHVALRAGAQVTIVHRDSRPLRQFDSSMVELLVQHTRASGADIQLETEAVAVEKQSGGL  240
            FAH+A RAG++V I+HR+ RPL +FD  +V++L++ ++  G +++L+    ++EK+ G +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  AVRVSTSGQMRTLYADMVVHAAGREPEIDDMNLDAGDVAWDRHGVKVNEYLQSVSNpavy  300
             V      ++  + AD+V+H+AGR P + DMNL+ G++ + +HGV VNEYLQSVSNP VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  aagdaaasggppLTPVASYDGVLVATNLLKGNHAKPDYNGIPSAVFTIPPLASVGLTESA  360
            AAGDAAA++G PLTPVAS D+ +VA+NLLKGN  K +Y  IPSAVFT+P +ASVG++E  
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  361  AREKGLKFTVKTESTGSWYSSRRVGESSSGYKTLVEERTDRILGAHLFGGAAAEVINVFA  420
            A++ G ++ VK  + + W++ +R  E  +++K L++E +D+++GAHL++  A E+IN FA
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  421  LAIRSGIPARDLKHMIFSYPTHGSDVSYML  450
             AIR GI++++LK+MIF+YPT +SD++ ML
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

5) Metev_0755 in NC_014253


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  386 bits (1453),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 222/448 (50%), Positives = 333/448 (75%), Gaps = 7/448 (1%)

Query  2    KKYDVVVIGTGTAGSTVAHKCNSAGKNVAIIDHRPFGGTCALRGCDPKKVLVGGAELVDW  61
            KKYD++VIGTG+AGS  A KCN AG NVA++D+RPFGGTCALRGCDPKKVL G+AEL+DW
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   NNRMKETAGLDRDTTINWTSLISFKRTFTQAFPDMIEKNFTSHGIDAYHGLACFSDDKTI  121
            N+RM    G+  + +INW  L++FKRTFT+  P+  E  +  +GID+YHG A F  +  +
Sbjct  64   NKRM-VKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKL  122

Query  122  EVGDDQIEGDYIVIATGSKPRELNILGEEHIITSDEFMELENLPGNVVFLGGGYISFEFA  181
            EV  + +EG  ++IA+G+KP  L I GEEH+  SDEF+EL++LP  +VF+GGGYISFEFA
Sbjct  123  EVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFA  182

Query  182  NIAARAGSKPLILQRGENPLKTFDSDMVDVAVEASKDAGIDVLTGHKVTKIEKKGNLYEV  241
            +IAARAGS   I++RG+ PL  FD D+VD+ +E SK+ GI+V   H V  IEK    ++V
Sbjct  183  HIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHV  242

Query  242  -TTENEKQNTFTTDLVVHGGGRSANIDELGLDKGNVEVHKKGIAVNEYMQSPSNPRVYAA  300
             +  +E    F +D+V+HG+GR + +D + L+KGN+E  K G+ VNEY+QS SNP VYAA
Sbjct  243  YARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAA  301

Query  301  GDCTEEGP-QLTPVAGLQGDTVAENIIKGNNKQVDYTGIPAVVFTLPPLASVGITKDDVK  359
            GD +  +   LTPVA+ +++ VA N++KGN+K+++Y  IP+ VFT+P +ASVG++ ++ K
Sbjct  302  GDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAK  361

Query  360  DT-HEVIYNDR--SSWYSSKRLNFNHAASKIIIDKQTDKILGAHILGPEAEEVINIFAMA  416
            ++ +++  +++  S W++ KR N + AA K++ID ++D+++GAH+++ EA+E+IN FA A
Sbjct  362  NSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA  421

Query  417  MRYGLNASDVKNAVFTYPSVCSDIEHMM  444
            +R+G+++ ++K+ +F+YP+  SDI HM+
Sbjct  422  IRFGISTKELKQMIFAYPTAASDIAHML  449

6) merA in NC_008571


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  384 bits (1442),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 327/447 (74%), Gaps = 1/447 (0%)

Query  2    KEYDVFIIGSGMSGMTIANKCASKGLSVAITDELPYGGTCALRGCDPKKVIIGATEVCDF  61
            K YD+++IG+G +G   A KC   G +VA+ D+ P+GGTCALRGCDPKKV+ GA+E+ D 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   AARLKTKGIDKVPEVNWADIMAFKQSFVDAMPPKIEKGYDKKGIDTYHSSARFISENTLK  121
              R+  +G+     +NW D+M FK++F D +P K E + +K+GIDTYH++A F+SE+ L 
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  IGDTEIKANKIVIATGAKPRELKFEGGELALLSADFLNLEKLPESLLFIGGGYIAFEFAH  181
            +    + ++ ++IA+GAKP  L + G E    S +FL+L+ LP+ ++F+GGGYI+FEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  IAARCGSKVTILHRGAKPLKNFEQDIVKHLVTATTDLGIELILNTEVNSINKKDQKFYVE  241
            IAAR GS V I+HRG +PL NF+ D+V  L+  + ++GI++ L+  V+SI+K + KF V 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  GKSNHGSKIFEADAVFNAAGRPPSIFDLDLEKANIAYSEKGIKVNSFLQSSSNPDIYAAG  301
            ++ +++   FEAD V+++AGR P++ D++LEK+NI     G+ VN +LQS SNP++YAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DAADTAGLPLTPVAVLEGHTVASNIIKGNKKEINYPPMPTIVFTLPTLASVGLKENEAEE  361
            DAA T GLPLTPVA  ++H VASN++KGN K I+YP +P+ VFT+P +ASVG+ E+EA +
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  KGYAIKVNHQDASEWFNAKRLNIDQYVFKTIIDKEKQTLLGAHLIGPQSEEIINIFALAI  421
             G  IKV++++ S+WF  KR N D   FK +ID + + ++GAHLI+ +++E+IN FA AI
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  422  KTEIPINDLRKMIFAYPTLASDIPHML  448
            +  I+ ++L++MIFAYPT ASDI+HML
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

7) RB2501_04890 in NC_013222


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  384 bits (1443),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 218/447 (49%), Positives = 331/447 (75%), Gaps = 1/447 (0%)

Query  2    KKYDVFIIGSGMSGMTIAYKCASKGLSVGITDELPYGGTCALRGCDPKKVIIGATEVRDF  61
            KKYD+++IG+G +G   A KC   G +V++ D+ P+GGTCALRGCDPKKV+ GA+E+ D 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   AKRLQGKGIDTIPDINWKDIMAFKQTFVDEMPRKIEKGYKKNGIDTFHSSAAFINENTLS  121
             KR+  +G+ +   INWKD+M FK+TF D++P K E + +K+GIDT+H++A+F++E+ L 
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  VGNQTIQADNVVIASGSKPKVLDFEGGQLAQTSTDFLNLKELPESLLFIGGGYIAFEFAH  181
            V ++ +++ + +IASG+KP  L + G +    S +FL+L ELP+ ++F+GGGYI+FEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  IAARSGAEVTIVHRGKRPLENFDKDIVKHLVDATINLGVRLVLETEVSKIESEDGHFVTT  241
            IAAR+G+EV I+HRG+RPLENFD D+V  L++ + ++G+++ L+  V  IE E+G F   
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  GISEGMETTYKSKAVFNSAGRPPAIFDLELEKAGISFSKKGIAVNEYLQSISNANIYAAG  301
            +      T + +  V+++AGR PA+ D++LEK+ I   K G+ VNEYLQS+SN+N+YAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DAADSRGLPLTPVAVLEGHVVASNIIKGNKKKVSYPPMPSVVFTLPTMATVGLLEDKAKE  361
            DAA + GLPLTPVA  ++HVVASN++KGN KK+ YP +PS VFT+P MA+VG+ E+ AK+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  KGFDINVNFEKVGNWFNARRLNVDEYAFKTIIDKNSNTILGAHLIGPHCEETINLFAMAI  421
             G +I+V+  ++++WF  +R N D  AFK +ID +S+ ++GAHLI+ + +E IN FA AI
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  422  KTKMTISDLRTMIFSYPTMVSDLTYML  448
            +  ++  +L+ MIF+YPT  SD++ ML
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

8) ZPR_4028 in NC_014041


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  382 bits (1438),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 216/448 (49%), Positives = 334/448 (75%), Gaps = 3/448 (0%)

Query  2    KKYDVFVIGSGMSGMTAANKCASKGLKVGITDELPYGGTCALRGCDPKKVIIGATEVRDF  61
            KKYD++VIG+G +G  +A KC   G +V++ D+ P+GGTCALRGCDPKKV+ GA+E+ D 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   AERLKGNGIDTVPKVNWEDIMAFKQSFVDAMPPKIEKGYKNKDIDTYHTSAKFLSDNTLE  121
              R+  NG+ +   +NW D+M FK++F D +P K E + ++++IDTYH +A F+S++ LE
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  LGDEVIEADKFVIATGAKPRVLDFEGGNLALSSTDFLNLKKLPESLLFIGGGYIAFEFAH  181
            +  EV+E+  F+IA+GAKP  L + G +    S +FL+L  LP+ ++F+GGGYI+FEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  IAARAGADVTILHRGDHPLENFDHDIVQHLVNATRNLGIKLVLETEVSKIEKKEDHYVVT  241
            IAARAG++V I+HRG++PLENFD D+V+ L++ ++++GI++ L+  V  IEK ++ + V 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  GKSNGKEATYKTDSVFNSAGRPPAIFDLDLEKAGISFSKKGIAVNEYLQSTSNANIYAAG  301
            ++ +   + + +D V+++AGR PA+ D++LEK+ I   K G+ VNEYLQS SN+N+YAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DSADSRGLPLTPVAVMEGHVVASNIIKGNKKKVNYPPMPSVVFTLPTLASVGLTEAEAKS  361
            D+A + GLPLTPVA  ++HVVASN++KGN KK++YP +PS VFT+P +ASVG++E EAK+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  KQIEYQVNYNHAESWFNAKRLNVKEY-AYKTIIDKENQTILGAHLIGPNTEETINLFAMA  420
               + +V+ ++   WF  KR N  ++ A+K +ID +++ ++GAHLI+ +++E IN FA A
Sbjct  363  SGRNIKVKQKNISDWFTYKRTN-EDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA  421

Query  421  IKTKMKINELRTMIFTYPTLSSDIPHML  448
            I+  +  +EL+ MIF+YPT +SDI+HML
Sbjct  422  IRFGISTKELKQMIFAYPTAASDIAHML  449

9) Xaut_2904 in NC_009720


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  379 bits (1424),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 226/449 (51%), Positives = 345/449 (77%), Gaps = 2/449 (0%)

Query  1    MAEQYDLVVIgtgtaamvaamrvraaGWSVAIIDYRPFGGTCALRGCDPKKMLVGGASAL  60
            M+ +YDL+VIGTG+A+ ++A +   AGW+VA++D RPFGGTCALRGCDPKK+L G+A  +
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DHARRMRGNGVAGDVHIDWPELIAFKRTFTDPVPEKHEHRYDEKGIHTYRGHARFTGRNS  120
            D  +RM  NGV+++V I+W +L+ FKRTFTD VPEK E+  + +GI+TY+G+A F + + 
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  LTVDGESLEARHVLIAAGAEPIRLGIPGEEYFATNEDFLAMERLPRRIVLVGGGYIASEF  180
            L V+ E LE+ H LIA+GA P  L I GEE ++ +++FL ++ LP+RIV+VGGGYI+ EF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  SHIAARAGVQVTILQRGKRMLGHFDPDLVGWLMDKFREIRVDVRLRTTVSAIEKDHAGFV  240
            +HIAARAG +V I++RG+R L +FD DLV+ L++K +EI ++V+L+ +V +IEK+++ F 
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  241  VRASSEGGDATFDADLVVHSAGRAPALDALDLEAGGVAAEKGRLKLNEYLQSVSNAAVYA  300
            V A    + + F+AD+V+H+AGR PALD ++LE G +   K  + +NEYLQSVSN+ VYA
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  301  AGDAAQEGP-PLTPVSSHDAKMVAANLLEGNRHRPDYRGVPSVAFTIPPIAAVGLSEEQA  359
            AGDAA  +  PLTPV+S D+ +VA+NLL GN  + +Y  +PS  FT+P +A+VG+SEE+A
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  360  RQQDLKFQTKSQKASDWFTARQAVEKTYGFKVMVEDDTGRIIGAHLVGPHADEVINLFAL  419
            ++ + +++ K ++ SDWFT +++ E   +FKV++++D+++++GAHL++ +ADE+IN FA 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  420  AIRHDLTADNLKTTMFAYPTGASDIGYML  448
            AIR ++++ +LK  +FAYPT+ASDI+ ML
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

10) gor in NC_008571


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  379 bits (1423),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 216/448 (49%), Positives = 330/448 (74%), Gaps = 3/448 (0%)

Query  2    KKYDVFVIGSGMSGMTVANKCASKGLKVGITDELPYGGTCALRGCDPKKVIIGATEVRDF  61
            KKYD++VIG+G +G   A KC   G +V++ D+ P+GGTCALRGCDPKKV+ GA+E+ D 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   AQRLKGNGIDTVPEVNWEDIMAFKESFVDAMPPKIEKGYKNKDIDTYHTSAKFLSDNTLQ  121
             +R+  NG+ +   +NW D+M FK +F D +P K E + ++++IDTYH +A F+S++ L+
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  VGDEVIEADKFVIATGAKPRVLDFEGGNLALSSTDFLNLKKLPKSLLFIGGGYIAFEFAH  181
            V  EV+E+  F+IA+GAKP  L + G +    S +FL+L  LP+ ++F+GGGYI+FEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  IAARAGADVTILHRGEFPLENFDRDIVQHLVDATRKLGIKLVLETEVSKIEKKEDHYVVT  241
            IAARAG++V I+HRG+ PLENFD D+V+ L++ ++ +GI++ L+  V  IEK ++ + V 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  GKSNGKETTYKTASVFNSAGRPPAIFDLDLEKAGISFSKKGITVNEYLQSTSNPNIYAAG  301
            ++ +   T + +  V+++AGR PA+ D++LEK+ I   K G+ VNEYLQS SNPN+YAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DSADSRGLPLTPVAVMEGHIVASNIIKGNKKKVNYPPMPSVVFTLPILASVGLTEAEAKS  361
            D+A + GLPLTPVA  ++H+VASN++KGN KK++YP +PS VFT+P +ASVG++E EAK+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  KQIEYQVNYNHAESWFNAKRLNVKEY-AYKTIINKENQTILGAHLIGPNAEETINLFAMA  420
               + +V+ ++   WF  KR N  ++ A+K +I+ +++ ++GAHLI+ +A+E IN FA A
Sbjct  363  SGRNIKVKQKNISDWFTYKRTN-EDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA  421

Query  421  IKTKMKINELRTMIFTYPTLSSDIPHML  448
            I+  +  +EL+ MIF+YPT +SDI+HML
Sbjct  422  IRFGISTKELKQMIFAYPTAASDIAHML  449

11) Slin_1435 in NC_013730


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  379 bits (1423),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 208/447 (47%), Positives = 325/447 (73%), Gaps = 4/447 (0%)

Query  5    TFDLIVIGTGSAGATVAQTARKAGKSVAIIDKLPFGGTCSQRGCDPKKILVGAAEIVARS  64
             +DLIVIGTGSAG+  A    KAG +VA++D  PFGGTC+ RGCDPKK+L GAAE++ ++
Sbjct  5    KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWN  64

Query  65   EQLTGKGITSPATIDWDALMQFKKTFTSPIPERTQSKFTDQGIQIFQGIASFSSANTIRI  124
             ++  +G+ S  +I+W  LM+FK+TFT  +PE+ +  +  QGI+ ++G ASF S + + +
Sbjct  65   KRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEV  124

Query  125  GEVELTANHIVVATGQRPQPLNIPGEKLLIDSTGFLELPRLPAKIVMVGGGYIAFEFAHI  184
                L ++H+++A+G +P PL I GE  L  S  FLEL  LP +IV VGGGYI+FEFAHI
Sbjct  125  NKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHI  184

Query  185  AARAGAKVSIIHQGQRPLEGFDADLVALLVKAMNAIGIHIILDARVTALEGDRDELIVRY  244
            AARAG+ V IIH+GQRPLE FD DLV +L+   + IGI++ L+  V ++E +++ + V Y
Sbjct  185  AARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHV-Y  243

Query  245  SQHDKEHT-VSTNLVVHAAGRVADVAELDLGNAGVTVGKKGIVVNEYLQSVSNPGIY-AC  302
            ++   + T   +++V+H+AGRV+ + +++L ++ +   K G+ VNEYLQSVSNP +Y A 
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  303  GDVAEKGLPLTPLASYEGSIVAENILNGNNRMYEDNPVPTAVFTIPTLASVGLTEEQAKD  362
            +  A  GLPLTP+AS ++ +VA N+L+GN++  E   +P+AVFT+P +ASVG++EE+AK+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  363  KGLRVQVRCQETNDWYSSRRINESFTAFKTLVEAETGTIVGAHVLGSGSEELINLFTLAI  422
             G  ++V+ ++ +DW++ +R NE F+AFK L++ +++ +VGAH++++ ++ELIN F+ AI
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  423  RHRINAKDLGAMLFAYPTHGSDLSSML  449
            R  I++K+L  M+FAYPT +SD++ ML
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

12) DDD_0677 in NC_020156


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  375 bits (1411),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 219/448 (49%), Positives = 335/448 (75%), Gaps = 3/448 (0%)

Query  2    KEYDVFIIGSGMSGMTIANKCASKGLSVGITDELPYGGTCALRGCDPKKVIIGATEVRDF  61
            K YD+++IG+G +G   A KC   G +V++ D+ P+GGTCALRGCDPKKV+ GA+E+ D 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   AKRLKGNGIDTVPKVNWKDIMDFKQTFVDEMPPKIEKGYEKSGIDTFHSSAKFLSENTLE  121
             KR+  NG+ +   +NWKD+M+FK+TF D++P K E + +K GIDT+H++A F+SE+ LE
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  LGNDKVRANKIVIASGSKPRVLEFEGGHYAKSSTDFLNLEKLPKSLLFIGGGYIAFEFAH  181
            + ++ + ++ ++IASG+KP  L + G +    S +FL+L+ LP+ ++F+GGGYI+FEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  IAARCGAEVTIVHRGQNPLENFEQDIVKHLVSATKELGIKLILNTDVTVIEKVDNQYRIK  241
            IAAR G+EV I+HRGQ PLENF+ D+V  L+  +KE+GI++ L+  V  IEK + ++++ 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  GKSQEKTEYFEAEAVFNSAGRPPSIFDLNLDEANIVFTNKGITVDKYLQSTSNPHIYAAG  301
            ++ +E    FEA+ V+++AGR P++ D+NL+ +NI   + G+ V+ YLQS SNP++YAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DAADSEGLPLTPVAVLEGHTVASNIIKGNSKEISYPPMPTVVFTLPTIASVGYSESKAKA  361
            DAA ++GLPLTPVA  ++H VASN++KGNSK I YP +P+ VFT+P +ASVG SE  AK 
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  LNYNIQVNYKEVGNWFNAKRLNVEEY-AFKTIIDVETQTILGAHLIGPHTEETINLFAMA  420
               NI+V+ K++++WF  KR N E++ AFK +ID +++ ++GAHLI+ +++E IN FA A
Sbjct  363  SGRNIKVKQKNISDWFTYKRTN-EDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA  421

Query  421  IKTKLKINDIRKMIFAYPTLASDITYML  448
            I+  +  +++++MIFAYPT ASDI+ ML
Sbjct  422  IRFGISTKELKQMIFAYPTAASDIAHML  449

13) Xaut_0796 in NC_009720


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  375 bits (1408),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 219/449 (49%), Positives = 338/449 (76%), Gaps = 2/449 (0%)

Query  1    MAKRYDLAIIGTGTAAIVTAHRVRAAGWSVAVADFRPFGGTCALRGCDPKKMMVGGAEAA  60
            M+K+YDL +IGTG+A+ +TA +   AGW+VA+ D RPFGGTCALRGCDPKK++ G+AE  
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DHAWRMSGRGIEGDATLDWTGLMAFKRSFTDPVPQKREKAFADKGIHAFHGHVRFIGPNA  120
            D   RM   G+ ++ +++W +LM FKR+FTD VP+K+E A+  +GI+++HG+  F++ + 
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  LEFGGERIEADRIVIAAGAEAVPLGIPGEQHLITNEGFLELESLPERIVLVGGGYIAAEF  180
            LE   E +E+ +++IA+GA + PL I GE+HL  ++ FLEL+ LP+RIV+VGGGYI+ EF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  SHIAARAGAQVTILQHGKRMLKQFDPDLVGWLMDKFSERGINVRTQAGVTAIEKVSDGYR  240
            +HIAARAG++V I+++G+R L +FD DLV+ L++K  E GI+V+ Q +V +IEK  + ++
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  241  VRADCPDGELDMDADLVVHAAGRAPALATLDLDAGSVKHHNGRLALNGFLQSVSNPAVYa  300
            V A   ++    +AD+V+H+AGR PAL  ++L+ G++ + +  + +N +LQSVSNP VYA
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  301  agdaaglgp-plTPVSSHDAKVVSANLLNGNTVRPEYTGVPSVAFTIPPIAAVGMSEAKA  359
            AGDAA+ +  PLTPV+S D+ VV++NLL+GN+ + EY  +PS  FT+P +A+VGMSE  A
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  360  REKGLNVRVKTERVDGWFTARQQAETVYGFKTLVDADTDRILGAHLVGPHADEVINIFAL  419
            ++ G N++VK   + +WFT ++  E   +FK L+D D+D+++GAHL++ +ADE+IN FA 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  420  AIRQGLTAEQLKTTMFAYPSGASDIGEML  448
            AIR G+++ +LK  +FAYP++ASDI++ML
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

14) Echvi_4146 in NC_019904


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  374 bits (1404),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 216/447 (49%), Positives = 333/447 (75%), Gaps = 2/447 (0%)

Query  2    KKYDVIVIGSGMAGMTIANKCAKKGLKTAITDSRPYGGTCALRGCDPKKILVGAAEIIGR  61
            KKYD+IVIG+G AG   A KC K G + A+ D RP+GGTCALRGCDPKK+L GAAE+I++
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   VDKMsgigisgdisiNWEDLMAYKNDFVSKMPKGVEKGYEKAGVKKYHGVASFESENTVR  121
              +M   G+++++SINW DLM +K  F   +P   E + +K G+  YHG ASF SE+ + 
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  IGNDLLEGGKIVIATGARPVTLDITGGDLPIDSTDFLNLEKLPEHITFVGGGYIAMEFAH  181
            + +++LEG+ ++IA+GA+P  L I G +    S +FL+L+ LP++I FVGGGYI+ EFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  LAARAGSKITIFHRGERPLENFDEHIVKHLVKATKDLGILLHVETEVIGIEKDGDQFIVF  241
            +AARAGS + I+HRG+RPLENFD ++V  L+  +K++GI +H++  V +IEK+ ++F V+
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  TKSSNGEQTHHTDLLVNAAGRVPELDGMNLEKASIAYNKKGIEVNEYLQSESNPTVYAAG  301
            ++  ++    ++D+++++AGRVP LD MNLEK++I  +K G++VNEYLQS SNP VYAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DAANSNGLNLTPVAVMEGHAVAANIIRGNSKVPDYTEMPSAVFTLPTLAAVGMTEKQAKE  361
            DAA ++GL LTPVA  ++H VA+N+++GNSK  +Y  +PSAVFT+P +A+VGM+E +AK+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  LDVEYQVKSASASNWYNAKRINESTYAYKV-ISHKDGHILGAHIIGPHAEEMINLFAMAI  420
             + + +VK  + S+W+  KR NE   A+KV I +  ++++GAH+I+ +A+E+IN FA AI
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  421  RGKLKVADIRNMVYSYPSMGSDIGSMV  447
            R  +   ++++M+++YP+ +SDI+ M+
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

15) Ftrac_2118 in NC_014759


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  373 bits (1402),  Expect = 9e-105, Method: Compositional matrix adjust.
 Identities = 210/447 (47%), Positives = 329/447 (74%), Gaps = 2/447 (0%)

Query  2    KKYDVIVIGSGMGGMTIANKCAKKGLKTAVTDSRPYGGTCALRGCDPKKILVGAAEIIDR  61
            KKYD+IVIG+G +G   A KC K G + A+ D RP+GGTCALRGCDPKK+L GAAE+ID+
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   ANKMKGIGIQGHISINWQDLMAYKNELVSKMPKNVEKGYEKSGVEMYHGTASFESENTVR  121
             ++M   G+ +++SINW+DLM +K  +   +P + E + +K G++ YHG ASF SE+ + 
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  IGDDLLEADKIVIATGARPVVLDIPGGNLPIDSTDFLNLGKLPEHITFIGGGYIAMEFAH  181
            +  ++LE+  ++IA+GA+P  L I G +    S +FL+L+ LP++I F+GGGYI+ EFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  LAVRAGSKVTIFHRGKMPLESFESDIVKHLVKATEELGIELHLEWDVVAVEKKDSGYTVK  241
            +A RAGS V I+HRG+ PLE+F+ D+V  L+  + E+GI++HL+  V ++EK ++ + V 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  AESKGGEKTIQTNLVVNAAGRVPELDGMNLEKANISYGKKGIDVNEYLQSLTNERVYAAG  301
            A  K +   +++++V+++AGRVP LD MNLEK+NI   K G++VNEYLQS++N  VYAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DAADSKGLNLTPVAVMEGHAVATNIIRGNSKKPDYTEMPSSVFTLPTLAAVGMTEAQAKK  361
            DAA + GL LTPVA  ++H VA+N+++GNSKK +Y  +PS+VFT+P +A+VGM+E +AK+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  AGLEYQVKASSASSWYNAKRINESTYAYKIISDKEG-YILGAHIIGPHAEEMINLFAMTI  420
            +G + +VK  + S W+  KR NE   A+K++ D ++  ++GAH+I+ +A+E+IN FA +I
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  421  KAKLKVSDIRDMVYSYPSMASDIGSMV  447
            +  +   ++++M+++YP+ ASDI+ M+
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

16) Cycma_4529 in NC_015914


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  371 bits (1396),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 217/447 (49%), Positives = 335/447 (75%), Gaps = 1/447 (0%)

Query  2    KKFDVFVLGSGMAGMNIANICAGKGLKVGITDELPYGGTCALRGCDPKKIMLGATEAKDF  61
            KK+D++V+G+G AG   A  C   G +V++ D+ P+GGTCALRGCDPKK++ GA+E  D 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   AQRLHEKQIAEVPAKHWEAAMKSKQEFVDAMPPKIEKGYKHNGIETFHKSAKFISENQLQ  121
             +R+  + ++   + +W   M+ K+ F D +P K E + + +GI+T+H +A F+SE++L+
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  VGDETIEAEKIVIATGAKPKVLGIPGEEHTLTSTDFLDFDKLPKSIVFIGGGYIAFEFAH  181
            V  E +E+  ++IA+GAKP  L I GEEH   S +FL++D LP+ IVF+GGGYI+FEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  MAARFGSEVIILHRSERPLENFDPFIVEQLTEATKKLNIRVVLNTNVTAVEKSGNSYLVT  241
            +AAR GSEV I+HR++RPLENFD  +V+ L E +K + I+V L+ +V ++EK    + V 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  GKNENGEQNWEAEAVINSAGRPPAIFDLDLEKANIAFSRKGIEVNEYLQSNTNPKIYAAG  301
            +++ ++    EA+ VI++AGR PA+ D++LEK+NI   + G++VNEYLQS +NP++YAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DAANTEGIPLTPVAVMEGHIVASNIIKGNTKKPNYTGIPTVVFTLPTMASVGLSEERATE  361
            DAA T+G+PLTPVA  ++H+VASN++KGN+KK +Y  IP+ VFT+P MASVG+SEE A +
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  QGINFTVKKKAVPDWFTGKRINEKTYAYKTLIEKETGKILGAHIIGPHSEEVINLFAIAI  421
             G N+ VK+K ++DWFT KR NE   A+K LI+ ++++++GAH+I+ +++E+IN FA AI
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  422  KTGLTSRDIKTMIFTYPSASSDIVYMV  448
            + G++++++K MIF+YP+A+SDI  M+
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

17) gll4201 in NC_005125


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  368 bits (1382),  Expect = 4e-103, Method: Compositional matrix adjust.
 Identities = 219/450 (49%), Positives = 323/450 (72%), Gaps = 5/450 (1%)

Query  1    MQKHYDLVVLGTGVAGSSVAKRCREAGWKVAVVDSRPFGGTCALRGCTPKKVLVQAGELL  60
            M K YDL+V+GTG AGS  A +C  AGW+VA+VD RPFGGTCALRGC PKKVL  A+EL+
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DRWRHLAGKGLRAEEARIDWPELMRFKRSLIEPLPAAREAEYAEAGIESYHGVARFVGAT  120
            D+ +++  +G+ + E  I+W +LM FKR++ + +P  +E      GI++YHG A FV+  
Sbjct  62   DWNKRMVKNGV-PSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  ALEVEGAHLQGEKVLIATGSRPATLGIEGEEHLASSDDFLELGTLPRRIVFVGGGYISME  180
             LEV+   L+G   LIA+G++P+ L I GEEHL+ SD+FLEL+ LP+RIVFVGGGYIS E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHLAARAGSQVHVLHQDERPLAPFDPDLVDRLIEATRELG-ALCLCHKVKAIEKTAQGL  239
            FAH+AARAGS+VH++H+++RPL  FD DLVD L+E ++E+G  + L H V +IEK    +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  240  LV--HTDGDGGPYAADLVVHGASRVPNVEALDLDGAGVEAGKKGIKVNAHLQSVSNPAVY  297
             V  +   D   + AD+V+HGA+RVP ++ ++L+ + +E  K G+ VN  LQSVSNP VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  AAGDVADAPGPQLTPVAGLHAETVAENLLKGNTRSLEQAVFASTVFTVPALAGVGLLEEQ  357
            AAGD A + G  LTPVA+ +++ VA NLLKGN++ +E +V++S+VFTVP +A+VG+ EE+
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  358  AQAQGLHYRVLQADHRDRLAVRSLAAPYAAHKILVEEPGGRILGAHLLGPFATEIINVFA  417
            A+  G + +V Q +  D+++ +     +AA K+L++E +++++GAHL++  A E+IN FA
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  418  LAIQAQVDIDQLRATHFAYPTGSSEIFAML  447
             AI+  +   +L+   FAYPT++S+I  ML
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

18) R2APBS1_3790 in NC_020541


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  364 bits (1366),  Expect = 7e-102, Method: Compositional matrix adjust.
 Identities = 218/451 (49%), Positives = 325/451 (73%), Gaps = 3/451 (0%)

Query  1    MSQQSYDLVVIGSGTAANVIAFNCRKAGWSVAIIDHRPFGGTCALRGCDPKKMLIAATEV  60
            M  + YDL+VIG+G+A+++ A +C KAGW+VA++D+RPFGGTCALRGCDPKK+L +A+E+
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   IDGFTRMGAIGTVQGELHIDWAALQRHKRSFTDPVPGHREQAYAKQGIDAYHGRARFSGR  120
            ID   RM   G V +E+ I+W  L   KR+FTD VP  +E+A  KQGID+YHG A F + 
Sbjct  61   IDWNKRMVKNG-VPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  NTITVGDRTLHAKHIAIAAGAEPVWLPIEGAEHLVLSDDFLNLESLPRRIVLVGGGYIGF  180
            + + V    L++ H+ IA+GA P  LPI G EHL  SD+FL+L+ LP+RIV+VGGGYI+F
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFAHIAARAGAEVSIFNRGAQPLAGFDPDLVGLLVERTRALGVAVHLGYEVKALCKRGDG  240
            EFAHIAARAG+EV I++RG +PL  FD DLV++L+E+++ +G+ VHL   V ++ K  + 
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  241  FEVEAQGPDGRLVVDADMVIHSGGRapalealdldaagiaHDHGRLTLDKTFRSTSHPAV  300
            F+V A+  ++    +AD+VIH++GR PAL+     +      HG + ++  ++S S+P V
Sbjct  240  FHVYARKKEDITRFEADIVIHGAGRVPALDMNLEKGNIERKKHG-VHVNEYLQSVSNPNV  298

Query  301  Y-AAGDASGGPLPLTPVAALEAHAVVDNLLHDKHVTVDYTGIPSAVFTLPVLARVGLLEA  359
            Y A++ A+ + LPLTPVA+ ++H V  NLL ++   ++Y  IPSAVFT+P +A VG+ E 
Sbjct  299  YAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEE  358

Query  360  EARAQGLRFKLSHANVPGWFTARRVNESCYGYKVLVEEGSDRILGAHLIGPEAAEVINLF  419
            EA+  G  +K+ + N+++WFT +R NE   ++KVL++E+SD+++GAHLI+ EA E+IN F
Sbjct  359  EAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHF  418

Query  420  GFAMRSGLGAAAIRRATFAYPTAASDIESML  450
            + A+R G+++  +++  FAYPTAASDI  ML
Sbjct  419  ATAIRFGISTKELKQMIFAYPTAASDIAHML  449

19) Ftrac_1225 in NC_014759


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  363 bits (1362),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 217/447 (49%), Positives = 330/447 (74%), Gaps = 1/447 (0%)

Query  2    KKYDLFVIGSGMAGMNIANRCASKGLKVGITDELPYGGTCALRGCDPKKIMLAATELRHF  61
            KKYDL+VIG+G AG   A +C   G +V++ D+ P+GGTCALRGCDPKK++ +A+EL + 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   ATNLEDRNISDIPEISWKAAMKSKQEFVEIMPAKLEKGYEKNGVETFHSSARFIKENQLK  121
               +    ++    I+WK  M+ K+ F + +P K E + +K+G++T+H++A F+ E++L 
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  VGDEIIEAAKIVIATGAKARHLDFPGGDLTLTSTDFLNFENLPKSLIFIGGGYIAFEFAH  181
            V  E++E++ ++IA+GAK+  L + G +    S +FL++++LP+ ++F+GGGYI+FEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  MAARYGSKVTIIHRGERPLENFDPFIVEQITKATEELDIELILNTDVSKIEKSEAGYKVT  241
            +AAR GS V IIHRG+RPLENFD  +V+ +   + E++I++ L+  V  IEK ++ + V 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  242  ANPDGIEKNWEAEVVINSAGRLPAIFDLDLVKGNVKFTQKGIVANEYLQSTSNPNVYVAG  301
            A         EA++VI++AGR+PA+ D++L KGN+   + G+  NEYLQS SNPNVY AG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  302  DAAATDGKPLTPVAVMEGHIVASNILKENSKKPDYRAIPTVVFTSPAMASVGLSEEEANQ  361
            DAAATDG PLTPVA  ++H+VASN+LK NSKK +Y  IP+ VFT P MASVG+SEEEA++
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  362  MGLNIIVKKNSVPNWFTAKRLNEKTYAYKTLIEKDSGKILGAHLIGPHAEEVINLFAMAI  421
             G NI VK++++++WFT KR NE   A+K LI+ DS++++GAHLI+ +A+E+IN FA AI
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  422  KGGLTSKDIKTMILTYPSASSDIVYMV  448
            + G+++K++K MI++YP+A+SDI  M+
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

20) HYPDE_27253 in NC_021172


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  358 bits (1345),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 218/450 (49%), Positives = 341/450 (76%), Gaps = 3/450 (0%)

Query  1    MPNQYDlvvlgtgvaattaafrcraaGWSVAIIDHLPFGGTCALRGCDPKKVLVGIAEAL  60
            M ++YDL+V+GTG A++ +A +C  AGW+VA++D+ PFGGTCALRGCDPKKVL G AE +
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DQSRRLRDRGIDGGELSIDWHQLMAFKRSFTDPVPQQREVEFAKNGIEAFHGLARFVGPQ  120
            D ++R+   G+  +E+SI+W +LM FKR+FTD VP+++E  + K+GI+++HG A FV+ +
Sbjct  62   DWNKRMVKNGV-PSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TIEVDGQRFDARFILIATGAAPMHLGIAGEKHLASSTDFLGLEELPKRLVFVGGGFIAQE  180
             +EV+ + +++  +LIA+GA P  L I GE HL+ S +FL L+ELP+R+VFVGGG+I+ E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FSHVAARAGASVVVLEQSDRILGQFDQDLVSWLQAKSATLGIDIRVNARVQSVVKSAGGF  240
            F+H+AARAG+ V ++++++R L +FD DLV  L  KS  +GI+++++  V+S+ K  G F
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  KVTVASDGDTTSLDADLVVHAAGRIPDLESLDLAAGNVTQEKGRLVLNEFLQSTSNSAVY  300
             V      D T ++AD+V+H+AGR+P L+ ++L  GN+ + K  + +NE+LQS SN+ VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  AAGDAASSGP-PLTPVASRDGAVVAANMTKGNHRQPDYAGVASVVFTIPPLARVGLLEDE  359
            AAGDAA+++  PLTPVAS D+ VVA+N+ KGN ++ +Y+ ++S VFT+P +A VG+ E+E
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  360  ARRRNLRYRVRHEKTFDWYTARRVNEDCSGFKLLIEEETERILGAHLIGPHAEEIINIFA  419
            A+      +V++ +  DW+T +R NED ++FK+LI+E++++++GAHLI+ +A+E+IN FA
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  420  LAIRAGLPASRLKETIFAYPTAGSDIGYML  449
             AIR G+++  LK+ IFAYPTA+SDI+ ML
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

21) Noca_1648 in NC_008699


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  356 bits (1338),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 212/450 (48%), Positives = 328/450 (73%), Gaps = 2/450 (0%)

Query  1    MAETYDLvvvgagmagvaaaNKCASSGWRVAIVDALPYGGTCALRGCDPKKILRRGAEII  60
            M+  YDL+V+G+G AG  +A KC  +GW VA+VD  P+GGTCALRGCDPKK+L+ +AE+I
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DGARLMRGKGIDGQGLRIDWADLMRHKRGFTDPVPDNLERDLAGHGVETLHGNARFLGGN  120
            D  + M  +G+ ++ + I+W DLM  KR FTD VP++ E  L  +G++T HGNA F++ +
Sbjct  62   DWNKRMVKNGVPSE-VSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TVEIAGASVESRHFLVATGARPRALAFPGHEHLIDSTDFLDLERLPARILFVGGGFISFE  180
             +E+    +E+ HFL+A+GA+P +L++ G+EHL  S +FL+L+ LP RI+FVGGG+ISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHIATRAGSATTVVDRGPRPLRGFDPDLVDLLLGRSRQAGIAVRPATTVTAIAKDKAGY  240
            FAHIA+RAGS   +++RG RPL  FD DLVD+LL +S++ GI V+   +V +I K+++ +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  QVTLETPEGSETIECDLVVHGAGReadlagldleaagVEWSPRGVRVAGHLQSTTNPAVY  300
            +V     E+   +E D+V+HGAGR     +++LE + +E+  +GV+V   LQS +NP VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGR-VPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  AAGDSADTPGMPLTPVAVFEGRVAASNMVNGTTRAPDYAGVPTAVFTIPELARVGLLERE  360
            AAGD+A T G+PLTPVA  +++V ASN+++G ++  +Y+ +P+AVFT+P +A VG+ E E
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  361  ARERGLDVDVRFNDTSGWYSNYRTGETTAAAKILVDRATDRVVGAHLLGPEYAELINVLG  420
            A++ G ++ V+ ++ S+W++  RT E  AA K+L+D  +D+VVGAHL++ E  ELIN ++
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  421  LAIKLGLTTRQLKSTTAAYPTVGSDLGSML  450
             AI++G++T++LK    AYPT +SD++ ML
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

22) Memar_0358 in NC_009051


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  351 bits (1318),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 215/451 (48%), Positives = 323/451 (72%), Gaps = 4/451 (0%)

Query  1    MEREYDVVVIGTGNAGSDIAWHCRKAGMQVAIVDSRDYGGTCALWGCVPKKVLAGAAEVV  60
            M + YD++VIGTG+AGS  A  C KAG +VA+VD R +GGTCAL+GC PKKVL GAAE++
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   SRAHDQLGNGIRGAIAIDWPELIAFEQTFTDPVPRQKEERFRGAGIHTYHGLARFAGPDR  120
             +    + NG+ + ++I+W +L+ F +TFTD VP +KEE +   GI+TYHG A F + D+
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  VAVGDDTLTGRYIVIAAGAHPRPLNVPGEDLMTSSDDFFYLEALPERIVFVGGGYISFEF  180
            + V  + L G  ++IA+GA P PL + GE+ +T SD+F+ L+ LP+RIVFVGGGYISFEF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHIAAAAGSAVTILQRSGRALKEFDPDIVDRLLLASGEAGIDVQMNMPLVSVEKNAADLR  240
            AHIAA AGS V I++R+ R+L +FD D+VD LL  S E GI+V+++ ++ S+EK+ + ++
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  241  VRAGRDGEEKTFGADMAVHGAGRVSAVGELDPAAGNVETDRRGIVVDEHLRSVSNPAVYV  300
            V A +  +   F AD+ +HGAGRV+A+ +++   GN+E  ++G+ V+E L+SVSNP VY 
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  301  AGDANPGSP-QLTPVAVMDAHIVVDNILGGNARVADYSVVPSAVFTNPPIASVGLTEEAA  359
            AGDA +     LTPVA  D+H+V  N+L GN++  +Y+V+PSAVFT P +ASVG++EE A
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  360  KEKGIPYVANAGDLSGRFTNRSIGQKHAGYKLLIDEDSRRILGAHLIGPHVEEVINIFAL  419
            K+ G     +  ++S++FT +   +  A++K+LIDEDS +++GAHLI+ + +E+IN FA 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  420  AIKHGLTVDDLTLDAIPWAYPSSTYDIIHMV  450
            AI+ G++  +L    +  AYP+++ DI HM+
Sbjct  421  AIRFGISTKELK--QMIFAYPTAASDIAHML  449

23) Mmah_0399 in NC_014002


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  350 bits (1314),  Expect = 9e-98, Method: Compositional matrix adjust.
 Identities = 212/450 (48%), Positives = 334/450 (75%), Gaps = 7/450 (1%)

Query  1    MAREYDIVIIGTGVAGTVCANKASAAGMKIAITDIREYGGTCALRGCVPKKVLVGVAETV  60
            M++ YD+++IGTG AG++ A K + AG ++A+ D R +GGTCALRGC PKKVL G AE +
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   EQVNRFNKLGIMPQSSVNWNKLMDFKQTFVDNFPQNKEEKFTNMDIDTYHGGAKFVSKNE  120
            +  +R  K G+ ++ S+NW+ LM+FK+TF D+ P++KEE + + +IDTYHG A FVS + 
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  VKIADTILKGKHILIAPGSVPRKTGIKGEENLITSEQFLNLDELPRKIVFVGGGYISFEL  180
            + +   +L G H+LIA+G+ P    IKGEE+L  S++FL+LDELP++IVFVGGGYISFE+
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHIAARAGSQVTILQRSE-VLKQFDRDMVKLLVKASEEAGINVNTGIsvssvestssGFT  239
            AHIAARAGS+V I++R++  L +FD D+V +L+  S E GI+V+   SV S+E   + F 
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  240  VNTRNREGKESRIECDLVVNGSGRIAALEGMELEKGNVETKDGFVETNDYMQSVSNPYVY  299
            V +R++E+  +R+E D+V++G+GR++AL+ M+LEKGN+E K   V+ N+Y+QSVSNP VY
Sbjct  242  VYARKKEDI-TRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  300  AAGDCVKPGA-PLTPVASLQGTTAADNMIKGNVKTVDYTGIPSTVFTLPPLSSVGISLSE  358
            AAGD    ++ PLTPVAS ++   A N++KGN K ++Y  IPS+VFT+P ++SVG+S  E
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  359  STD---RYEVLIHDRSHWYNSRRLSENYAASKVIIEKESQKIAGAHILGSHSEEVINIFA  415
            + +      V   + S+W+  +R +E++AA KV+I+ +S+++ GAH+++++++E+IN FA
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  416  MAIRLGLTLSQFKKVVYVFPTVSSEIQSMI  445
             AIR+G++  ++K++++ +PT +S+I  M+
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

24) BN140_1541 in NC_018227


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  349 bits (1311),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 207/451 (46%), Positives = 322/451 (72%), Gaps = 4/451 (0%)

Query  1    MEREYDVIVIGTGVAGSDVAWHCREAGMRIAITDHQTYGGTCALRGCVPKRVLAGAAEVV  60
            M + YD+IVIGTG AGS  A  C  AG  +A+ D++ +GGTCALRGC PK+VL GAAE++
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   ARVHDQQGRGIRGEVSIDWPQLLAFERSFTDPIPRRKEERFRRAGIHTCRGFARFAGPDR  120
             +       G+ +EVSI+W +L+ F R+FTD +P +KEE + + GI+T +G A F + D+
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  VAIGDDLFSARYIVIATGAHPRPLDVPGADLVTQSDDFFYLETLPERIVFIGGGYISFEF  180
            + +  +++ +  ++IA+GA P PL + G + +T SD+F+ L+ LP+RIVF+GGGYISFEF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHVAARAGAKATILQRSGRVLKGFDHDIVDRLVQASREVGIDVQMNMPLLSVEKTAAGLL  240
            AH+AARAG+   I++R+ R L  FD D+VD L++ S+E+GI+V+++ ++ S+EK  + + 
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  241  VRAGREGEEETFEADMVVHGAGRVPAIEGLDLAAGGVETDRRGIRVNEYLQSVSNPAVY-  299
            V A +  +   FEAD+V+HGAGRVPA++ ++L  G +E  ++G++VNEYLQSVSNP VY 
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  300  VAGDANPGGVQLTPVAVRDAHIVVDNILNGNARAADYWVVPSAVFTNPPIASVGLTEEAA  359
             ++ A  +G+ LTPVA  D+H+V  N+L+GN++  +Y V+PSAVFT P +ASVG++EE A
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  360  KEKGIPYIVHAGDLSERFTNRGINQKHVGYKLLIDGDSRRILGAHLIGHHVEEVINIFAL  419
            K+ G    V   ++S++FT +  N+   ++K+LID DS +++GAHLI+++ +E+IN FA 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  420  AIKHGLTVDDLTLDAIAWAYPSNTYDIIHMV  450
            AI+ G++  +L    +  AYP+ + DI HM+
Sbjct  421  AIRFGISTKELK--QMIFAYPTAASDIAHML  449

25) Flexsi_1327 in NC_015672


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  349 bits (1312),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 194/449 (44%), Positives = 324/449 (73%), Gaps = 4/449 (0%)

Query  4    TQKYDFIAIGSGVAGSTAVIECARHGLKTAIVDNKPYGGTCPLRGSDPKKILLGAAELYD  63
            T+KYD+I IG+G AGS +   C + G + A+VD++P+GGTC+LRG DPKK+L GAAEL D
Sbjct  3    TKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELID  62

Query  64   WFSRMKNTGIINGDIRIDWQNLIQYKCSYTNNIPMKVEQSLKKMSIDSLSGNAEFANENT  123
            W  RM + G+  +++ I+W++L+++K ++T+++P K E++L+K +ID+  GNA F +E+ 
Sbjct  63   WNKRMVKNGV-PSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  124  LKIGDKFYTADNILVASGSVPTKLPFNGAEMMSSSDDFLSLKTLPDKIIFVGGGFISMEF  183
            L +      + ++L+ASG+ PT LP++G E ++ SD+FL L  LP++I+FVGGG+IS EF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  184  AQAAARAGAKSIIVHSGERILLGFDKELVGLLNKAAQESGIDIIVNNRVSKIETDGDTLI  243
            A+ AARAG+   I+H G+R L  FD +LV++L   ++E GI++ +++ V  IE + + + 
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  244  AHLSNSEETIR--ADMIVHGAGRMANVYNMNLETGNVAYDSGGIKVNEYMQNTSNSSVYA  301
                + E+  R  AD+++HGAGR++ + +MNLE GN+     G+ VNEY+Q+ SN++VYA
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  302  AGDVTDSEGPYLATVAAMEGRIAAENIIHGNKRKPQYENIPSVVFTIPTLASVGMQEEDA  361
            AGD + ++G  L+ VA+ ++++ A N++ GN +K +Y  IPS VFT+P +ASVGM EE+A
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  362  AKAGIKYNSRFQETSDWFTSYRVGEKYSGYKIITDENNTKILGAHLLGPSSEDVINLFTF  421
             ++G + + + ++ SDWFT  R  E ++++K++ DE++ +++GAHL++  ++++IN F+ 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  422  AINRGITPEEMKNMVYTYPTASSDIVYML  450
            AI  GI+  E+K+M+++YPTA+SDI  ML
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

26) MAB_p09 in NC_010394


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 213/450 (48%), Positives = 321/450 (72%), Gaps = 2/450 (0%)

Query  1    MTARFDvivigagmagiaaaNKCGAQGWRVAIVDSLPYGGTCALRGCDPKKILRRGAEII  60
            MT ++D+IVIG+G AG  +A KC   GW VA+VD  P+GGTCALRGCDPKK+L+ +AE+I
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DASRLMRGKGIDEGQIRINWTDLMRHKRGFTDPAPANMENDLRRHGVQTLHGQARFVDAH  120
            D ++ M  +G+  +++ INW DLM  KR FTD  P + E+ L ++G++T HG+A FV  +
Sbjct  62   DWNKRMVKNGV-PSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  QISVGDDVHHTERFLVATGARPRPLQFDGHEHLIDSTQFLDLEDLPPRIVFVGGGYISFE  180
            ++ V  +V +  +FL+A+GA+P PL + G+EHL  S +FL+L++LP RIVFVGGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHIAARAGSHPIILDHGPRPLKGFDPDLVDLLIGRGVAAGvdvrasttvtavratatGY  240
            FAHIAARAGS+  I+++G RPL  FD DLVD+L+ ++   G++V+   +V ++      +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  QVQVNQDGTDATIDADVVVHGAGRLPELADLDLDRAGIAWSERGIRVQPHLQSTTQPGVY  300
            +V   +    + ++AD+V+HGAGR+P L D++L+++ I +  +G++V+  LQS ++P VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  aagdaadtagppLTPVAVIEGKVAASNMLKAASTVPDYTGIPSAVFTIPELARVGLLEAE  360
            AAGDAA T G PLTPVA  ++ V ASN+LK+ S   +Y  IPSAVFT+P +A VG+ E E
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  361  ARDQGLNIDVRYSDASTWYSSYRIGEGTAAAKILVNKDDDRIVGAHLLGPDYTEHANTIA  420
            A++ G NI V+  + S W++  R  E+ AA K+L++ D D++VGAHL++ +  E  N +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  421  VAIKLGLTTRQLKTTTAAYPTLGSDLGSML  450
             AI++G++T++LK    AYPT +SD++ ML
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

27) MMAR_p09 in NC_010604


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 213/450 (48%), Positives = 321/450 (72%), Gaps = 2/450 (0%)

Query  1    MTARFDvivigagmagiaaaNKCGAQGWRVAIVDSLPYGGTCALRGCDPKKILRRGAEII  60
            MT ++D+IVIG+G AG  +A KC   GW VA+VD  P+GGTCALRGCDPKK+L+ +AE+I
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DASRLMRGKGIDEGQIRINWTDLMRHKRGFTDPAPANMENDLRRHGVQTLHGQARFVDAH  120
            D ++ M  +G+  +++ INW DLM  KR FTD  P + E+ L ++G++T HG+A FV  +
Sbjct  62   DWNKRMVKNGV-PSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  QISVGDDVHHTERFLVATGARPRPLQFDGHEHLIDSTQFLDLEDLPPRIVFVGGGYISFE  180
            ++ V  +V +  +FL+A+GA+P PL + G+EHL  S +FL+L++LP RIVFVGGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHIAARAGSHPIILDHGPRPLKGFDPDLVDLLIGRGVAAGvdvrasttvtavratatGY  240
            FAHIAARAGS+  I+++G RPL  FD DLVD+L+ ++   G++V+   +V ++      +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  QVQVNQDGTDATIDADVVVHGAGRLPELADLDLDRAGIAWSERGIRVQPHLQSTTQPGVY  300
            +V   +    + ++AD+V+HGAGR+P L D++L+++ I +  +G++V+  LQS ++P VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  aagdaadtagppLTPVAVIEGKVAASNMLKAASTVPDYTGIPSAVFTIPELARVGLLEAE  360
            AAGDAA T G PLTPVA  ++ V ASN+LK+ S   +Y  IPSAVFT+P +A VG+ E E
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  361  ARDQGLNIDVRYSDASTWYSSYRIGEGTAAAKILVNKDDDRIVGAHLLGPDYTEHANTIA  420
            A++ G NI V+  + S W++  R  E+ AA K+L++ D D++VGAHL++ +  E  N +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  421  VAIKLGLTTRQLKTTTAAYPTLGSDLGSML  450
             AI++G++T++LK    AYPT +SD++ ML
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

28) lin1472 in NC_003212


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  341 bits (1281),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 199/445 (45%), Positives = 322/445 (73%), Gaps = 5/445 (1%)

Query  5    TYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAAEARNLS  64
             YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GAAE  + +
Sbjct  5    KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWN  64

Query  65   TRLRGKGIKEAATISWTDLMAFKETFVEDVPESRLESFQEAGIETFFGPASFQNENTLQV  124
             R+  +G+    +I+W DLM FK TF +DVPE + E+++  GI+T+ G ASF +E+ L+V
Sbjct  65   KRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEV  124

Query  125  GNDILSAKKIVIATGATPNTLKVEGQEHIQTSDDFLSLEKLPDSVVFIGGGYISFEFASI  184
             +++L +  ++IA+GA P  L + G+EH+  SD+FL L+ LP+ +VF+GGGYISFEFA I
Sbjct  125  NKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHI  184

Query  185  ALAAGRDVHIIHHNSEPLKKFDPDFVAALVATLKEEGIHFHFDTDITKINKNGEKLHI--  242
            A  AG +VHIIH+   PL +FD D+V  L+   KE GI+ H++  +  I+K+  K+H+  
Sbjct  185  AARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVYA  244

Query  243  EGKNGFS-LETDLIIGATGRTPNIAHLALDKANIDYTKKGITVNEKLQTPNHPHIYACGD  301
              K++++ +E+D++I ++GR P +  + L+K+NI+  K G+ VNE LQ+ ++P++YA GD
Sbjct  245  RKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAGD  303

Query  302  VAATKGAPLTPVVSMEAALVAKNIL-GGNEKIDYPAIPSVVFTSPKLASIGISMEEANAN  360
             AAT G PLTPV S ++ +VA N+L G + KI+YP IPS VFT PK+AS+G+S EEA+ +
Sbjct  304  AAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKNS  363

Query  361  PEKYQIKNHDTTNWYTYRRTNEKIALAKIIEDRETGQIKGAHFLSEEADYMINYIAILMK  420
              + ++K+ + ++W+TY+RTNE +A  K++ D +++Q+ GAH++S+EAD +IN +A  ++
Sbjct  364  GRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAIR  423

Query  421  ANLTLADLQSVIFAYPSPASDLTAL  445
              ++  +L+ +IFAYP++ASD++ +
Sbjct  424  FGISTKELKQMIFAYPTAASDIAHM  448

29) gor in NC_008571


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  340 bits (1275),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 201/451 (45%), Positives = 312/451 (70%), Gaps = 2/451 (0%)

Query  1    MGIEEFDVFIIGTGTAGKSVAEECIAEGLKVAIADNREFGGTCANRGCDPKKVLVGLTEI  60
            M    +D+++IGTG+AG   A  C   G +VA+ D+R FGGTCA RGCDPKKVL G +E+
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   LDRAEKMKGHGITKMPEFSWKDLMKFKETFTSAVPAATEKDMKALGIKMYHQSPKFLDEN  120
            +D+  +M  +G+     ++WKDLM+FK TFT  VP   E  ++  GI  YH ++ F+ E+
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TLSVEGKTVKAKKIVIATGNKALELPIPGRDLPIISDDFLELEELPESIIFIGAGYIGME  180
             L V+   + +  ++IA+G K+  LPI G +    SD+FLEL+ELP+ I+F+G+GYI+ E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHIAARCGANVTVVEGESRALGNFDEAMVKHLQKASEEIGIKFVFDSEVTEVEKLQTNY  240
            FAHIAAR G++V +++   R+L NFD  +V  L   S EIGI+  ++  V  +EK Q ++
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  RVIANQNGKQIELKAKLVLNTAGRVPSIDDLDLENGNVDFSKKGIIVNEHLQSPTNKNVY  300
            +V A ++     + A +V++ AGRVP++ D++LE+GN++  K G+ VNE LQS +N NVY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  ACGDVSDSEGLPLTPLSSQEARIVAGNILDKDRDKTVDYPPQPSVVFTLPNLASVGLNEK  360
            A GD + ++GLPLTP++S ++++VA+N+L K+  K ++YP  PS VFT+P++ASVG++E 
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLL-KGNSKKIEYPVIPSAVFTVPKMASVGMSEE  358

Query  361  EAKEKGYDFKVEQKLVPKWFNAKRINDDYYAYKTLIDKETGLVLGAHLLGPDAGEMINMF  420
            EAK+ G ++KV QK ++ WF  KR N+D+ A+K LID +++ V+GAHL++ +A+E+IN F
Sbjct  359  EAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHF  418

Query  421  VMAMCGKLNCETLKGMIFSYPSWGSDIKAMV  451
              A+   ++   LK MIF+YP+ +SDI  M+
Sbjct  419  ATAIRFGISTKELKQMIFAYPTAASDIAHML  449

30) lwe1450 in NC_008555


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  338 bits (1269),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 199/445 (45%), Positives = 325/445 (74%), Gaps = 5/445 (1%)

Query  5    TYDVVIIGSGASGTTVAFEAQAAGLKVAIIEERSWGGTCVLRGCDPKKVLIGAAEARNLS  64
             YD+++IG+G++G+  A   + AG +VA++++R+ GGTC LRGCDPKKVL GAAE  + +
Sbjct  5    KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWN  64

Query  65   TRLRGKGIKQAASISWQDLMAFKETFVEDVPESRLESFQEAGIETFFGQAIFQDSHTLQV  124
             R+  +G+    SI+W+DLM FK TF +DVPE + E+++  GI+T+ G+A F   + L+V
Sbjct  65   KRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEV  124

Query  125  GKDLLNAEKIVIATGAVPSSLKVEGQEYIQNSDDFLSLKELPESVVFIGGGYISFEFASI  184
             K++L++  ++IA+GA P++L + G+E +  SD+FL L ELP+ +VF+GGGYISFEFA I
Sbjct  125  NKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHI  184

Query  185  ALAAGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGVHFHFDIDITKIVKNNGKLHIDG  244
            A  AG EVHIIH+   PL +FD D+V  L+ + KE G++ H++  +  I K++GK+H+ +
Sbjct  185  AARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVYA  244

Query  245  KNN---FSLNTDLIIGATGRTPNIAHLALEKANIDYTKKGITVNEKMQTVNNEHIYACGD  301
            +++     +++D++I ++GR P +  + LEK+NI+  K G+ VNE +Q+V+N ++YA GD
Sbjct  245  RKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAGD  303

Query  302  VAASKGAPLTPVVSMEALLVAKNIL-GKDEKINYPAIPSVVFTSPKLASIGISMEEAKAN  360
             AA+ G PLTPV S ++ +VA N+L G+  KI+YP IPS VFT PK+AS+G+S EEAK +
Sbjct  304  AAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKNS  363

Query  361  PEKYQIKSHDTTNWYTYKRTNEQLALAKIIEDRETGQIRGAHFLSEEADYMINYIAILMK  420
              + ++K  + ++W+TYKRTNE++A  K++ D +++Q+ GAH++S+EAD +IN +A  ++
Sbjct  364  GRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAIR  423

Query  421  ASLTLADLNSVIFAYPSPASDLTAL  445
             +++  +L+ +IFAYP++ASD++ +
Sbjct  424  FGISTKELKQMIFAYPTAASDIAHM  448

31) MexAM1_META1p2630 in NC_012808


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  337 bits (1266),  Expect = 5e-94, Method: Compositional matrix adjust.
 Identities = 213/453 (48%), Positives = 333/453 (74%), Gaps = 6/453 (1%)

Query  1    MAGSYDLIIIGSGTaamvasnrasaaGRKVAVTDFRPFGGTCALRGCDPKKMLVTGAQVM  60
            M+  YDLI+IG+G+A+ +++ + + AG++VA+ D RPFGGTCALRGCDPKK+L  +A+++
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DDIRRMRTRGVVAPEARMSWPELMAFKRTFTAPIPEKQARNYAGKGIDAFHGQARFVGRN  120
            D  +RM  +  V++E  ++W +LM FKRTFT  +PEK+      +GID++HG+A FV+ +
Sbjct  62   DWNKRM-VKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  AVAIAGEGVCEARHILIAAGARPAPLPFPGAEHLVTNeefleleelPPRIILVGGGYIAA  180
             + +  E + E+ H+LIA+GA+P+PLP+ G EHL  ++EFLEL+ELP RI++VGGGYI+ 
Sbjct  121  KLEVNKEVL-EGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFSHIAARAGASVAILQRGERLLTQFDPELVGWLMESFHEAGIDVRTRRAVVRVEKAGHG  240
            EF+HIAARAG+ V I++RG+R L +FD +LV+ L+E   E GI+V+ +++V  +EK    
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  241  YTVLTRSETGAEEAMEADLVVHAAGRIPDLEPLQLDAAGVARDERGHLRLNAFLQSPSNP  300
            + V +R   +     EAD+V+H+AGR+P L+ ++L+ + + R  +G +++N +LQS SNP
Sbjct  240  FHVYARKKEDIT-RFEADIVIHGAGRVPALD-MNLEKGNIERKKHG-VHVNEYLQSVSNP  296

Query  301  AVYAAGDAARTGP-PLTPVSSHDAKVAVRNMIEGNQYRPDYRGVPSVAFTIPPIASVGLS  359
             VYAAGDAA T+  PLTPV+S D+ V   N++ GN  + +Y  +PS  FT+P +ASVG+S
Sbjct  297  NVYAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMS  356

Query  360  EAEARQRNLRFRLRSQRVSGWYTARRVAEPTYGFKVLVDEDTDRVLGAHLVGPHVDEVIN  419
            E EA++    ++++ + +S+W+T +R  E   +FKVL+DED+D+V+GAHL++ + DE+IN
Sbjct  357  EEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELIN  416

Query  420  IFGLAIRHGLTAEDLKTTMFAYPTGASDIGYML  452
             F+ AIR G+++ +LK  +FAYPT+ASDI+ ML
Sbjct  417  HFATAIRFGISTKELKQMIFAYPTAASDIAHML  449

32) Mpsy_2263 in NC_018876


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  336 bits (1262),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 212/454 (47%), Positives = 320/454 (71%), Gaps = 13/454 (2%)

Query  1    MDENYDAFVIGTGAAGATFAYKLKAAGMKVAIADCREYGGTCALRGCIPKKVLTGAANII  60
            M  +YD +VIGTG+AG+  A K + AG +VA+ D R +GGTCALRGC PKKVL GAA++I
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DAHNRMREKGSGKETMFLDWPALIDFKRTFIIPHPQQREGGFKDAGIDTYHGIVRFASES  120
            D ++RM  +G   E   ++W  L++FKRTF    P+++E +++  GIDTYHG   F SE 
Sbjct  62   DWNKRMVKNGVPSEVS-INWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TLIVGDQRIRTNYIAIATGSKPRMPDIPGEEYFVTSKQFMEMENIPERIIFAGGGYISFE  180
             L V  + +  + + IA+G+KP    I GEE +  S +F+E++++P+RI+F GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHVAARAGSQVTILQRGDRVLKEFDPDLVDFLVKASEDAGIRVITGHEVRKIEKINESI  240
            FAH+AARAGS+V I++RG+R L +FD DLVD+L+  S + GI+V   H V  IEK +++ 
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEK-EQGK  239

Query  241  VTTCCRKDGKEETFSADIIVHGLGRVPAIEELQLEKGNVALEKGNIVLNEYLQSVSNPKV  300
                 RK      F ADI++HG GRVPA+ +++LEKGN+   K  + +NEYLQSVSNP+V
Sbjct  240  FHVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNV  298

Query  301  Y----AAGDCILPGPKLTPVVNMQADIAASNILEGNKSGADYSVIPSTVFTIPPLARVGI  356
            Y    AA+   LP   LTPV + ++++ ASN+L GN    +Y+VIPS+VFT+P +A VG+
Sbjct  299  YAAGDAAATDGLP---LTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGM  355

Query  357  S-ESTSSSGH--KVLFHDMSQWYSAKRTNIRYSASKVIIDEQTDRILGAHILGPNAEEVI  413
            S E + +SG+  KV   ++S+W++ KRTN  ++A KV+IDE++D+++GAH+++ +A+E+I
Sbjct  356  SEEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELI  415

Query  414  NLFAIAMKYGLTATQLRSTIFAYPSISYDLNYIL  447
            N FA A+++G+++ +L+  IFAYP+ + D+  +L
Sbjct  416  NHFATAIRFGISTKELKQMIFAYPTAASDIAHML  449

33) Aeqsu_1152 in NC_018013


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  336 bits (1260),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 204/450 (46%), Positives = 310/450 (69%), Gaps = 1/450 (0%)

Query  24   MAIKEYDVFVIGTGTAGKSVAYDCVANGMKVAIADNREFGGTCSQRGCDPKKVLVGFTEA  83
            M  K YD++VIGTG+AG   A  C   G +VA+ D+R FGGTC+ RGCDPKKVL G +E 
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  84   IQLAENLKGKGIISVPKIDWAALQKFKSTFTDAVPAATERDLEEAGIEMYHQSPQFLDEN  143
            I+    +  +G+ S   I+W  L +FK TFTD VP   E  L+  GI+ YH ++ F+ E+
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  144  TLSVEGKTVKAKKIVIATGQKPMELKIPGREHLMISDDFLDLEELPESIVFVGAGYIGME  203
             L V+   + +  ++IA+G KP  L I G EHL  SD+FL+L+ELP+ IVFVG+GYI+ E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  204  FAHIAARCGVRVTVVEFGDRPLGPFESDIVTHLTKASEELGIKFIFNAEVSKVEKLQKNY  263
            FAHIAAR G  V +++ G+RPL  F+ D+V  L   S E+GI+  ++  V  +EK Q ++
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  264  RVSFKKNGKTESIDARMVFNTAGRVPSIDELDLEKGNVAFEKGGISVNEFLQNTTNKSVY  323
            +V  +K+     ++A +V++ AGRVP++D ++LEKGN+   K G+ VNE+LQ+ +N +VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  324  ACGDVSASGSLPLTPISSQEARVVSLNIRNGNHTKIDFPPVPSVVFTIPQIASIGLTEEE  383
            A GD +A+++LPLTP++S +++VV+ N+ +GN  KI++P +PS VFT+P++AS+G++EEE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  384  AKEKGYDYVVEYKSVPKWFNAKRINEKVYAYKTIVDTKRNIVLGAHIIAPEAGEMINLFV  443
            AK+ G +  V  K+++ WF  KR NE   A+K ++D   + V+GAH+I+ EA+E+IN F 
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  444  LAMCGKLTTDNIKAMIFAYPTWGNDIKGMV  473
             A+   ++T ++K MIFAYPT ++DI  M+
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

34) Mzhil_1636 in NC_015676


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  334 bits (1255),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 198/451 (44%), Positives = 322/451 (72%), Gaps = 9/451 (1%)

Query  1    MAEEYDVIVIGTGVSGGAAASRCRDGGMSVAVIDSGGYGGTCPQRGCIPKKVLVGGADMI  60
            M+  YD+IVIGTG +G+ +A++C  +G +VA++D   +GGTC+ RGC PKKVL G+A++I
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DWPMRMIDKGSPVSGDFKLQWSELIKFKRTFTDPVAEKTENWLKSLGIATYHGRARFLDS  120
            DW  RM+ +G  V+++  ++W +L++FKRTFTD V+EK E+ L+  GI TYHG A F+  
Sbjct  62   DWNKRMVKNG--VPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  HTLEFNDTKIRGKYIVIATGAKPAELGIKGGEHLVTSDGFMELDILPDDITFIGGGFISF  180
            + LE N   + G  ++IA+GAKP+ L IKG EHL  SD F+ELD LP+ I F+GGG+ISF
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFAHVAARTGAEVRILNRSSRVLKGFDPEMVDLVVKATEDAGIDVITEKEPVSIEWLGDS  240
            EFAH+AAR+G+EV+I++R+ R L  FD ++VD+++  + + GI+V  +    SIE   + 
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  241  YQVTTKDGDS---FITGMVVHGAGRVPQTADLDVEKAGIETQKGRIVVNEYMQSVSSKHI  297
            ++V ++  +    F +++V+HGAGRVP + D+++EK+ IE +K  + VNEY+QSVS+ ++
Sbjct  240  FHVYARKKEDITRFEADIVIHGAGRVP-ALDMNLEKGNIERKKHGVHVNEYLQSVSNPNV  298

Query  298  YSVGDVTGDFK-QLTPTaayqaavaaTNIIEGNVEPIDYTGISGVVFTVPPLASVGIDST  356
            Y+ GD ++     LTP A+ ++ V A+N++ GN   I+Y  I++ VFTVP +ASVG+   
Sbjct  299  YAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEE  358

Query  357  QVQEGRHRVIFNDKK--DWISSRRTNYGYSASKIIIDEKTGLIAGAHLLGPEAEEVINIF  414
            + +++ + +  ++K+  DW++ +RTN +++A K++IDE ++ + GAHL++ EA+E+IN F
Sbjct  359  EAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHF  418

Query  415  SMAMRLKIPAEKLKTFPYSYPTASTDIRSML  445
            + A+R+ I++  LK   ++YPTA++DI  ML
Sbjct  419  ATAIRFGISTKELKQMIFAYPTAASDIAHML  449

35) LMLG_1691 in NC_017547


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  332 bits (1244),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 322/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCALRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTCALRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

36) M642_05100 in NC_021823


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  332 bits (1244),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 322/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCALRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTCALRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

37) BN418_1682 in NC_020557


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  331 bits (1243),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFLGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

38) BN419_1677 in NC_020558


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  331 bits (1243),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFLGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

39) M639_10160 in NC_021837


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  331 bits (1242),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHNTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ N + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

40) LM5923_1526 in NC_013768


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  331 bits (1241),  Expect = 5e-92, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

41) LM5578_1574 in NC_013766


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  331 bits (1241),  Expect = 5e-92, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

42) lmo1433 in NC_003210


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  330 bits (1237),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GVNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

43) LMKG_00782 in NC_017546


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  330 bits (1237),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GVNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

44) gshR in NC_018588


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  330 bits (1237),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GVNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

45) gshR in NC_018589


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  330 bits (1237),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GVNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

46) gshR in NC_018590


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  330 bits (1239),  Expect = 8e-92, Method: Compositional matrix adjust.
 Identities = 195/449 (44%), Positives = 325/449 (73%), Gaps = 6/449 (1%)

Query  1    MAKYTYDVVIIGSGASGTTVAFEAQAAGLKVAVVEERSWGGTCVLRGCDPKKVLVGASEA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA+E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLESFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E+++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHMIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVH+IH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYNKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+ +K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKII-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRETGQIKGAHFLSEEADYMINYIA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +++Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

47) gshR in NC_018587


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

48) gshR in NC_018591


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

49) gshR in NC_018586


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

50) M643_01650 in NC_021826


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

51) M641_06315 in NC_021838


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

52) LIV_1392 in NC_016011


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 193/445 (44%), Positives = 315/445 (71%), Gaps = 5/445 (1%)

Query  5    TYDVVVIGSGASGTTVAFDTQVAGLSVAIVEEHSWGGTCVLRGCDPKKVLVGASEARNFS  64
             YD++VIG+G++G+  A   + AG +VA+V++++ GGTC LRGCDPKKVL GA+E  + +
Sbjct  5    KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWN  64

Query  65   KRLRGKGIKQAATISWTDLMAFKETFVEDVPEQRLQSFQDAGIETFFGKARFQSKDSLQV  124
            KR+  +G+    +I+W DLM FK TF +DVPE++ ++++  GI+T+ G+A F S D L+V
Sbjct  65   KRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEV  124

Query  125  GEDVLKAKNIVLATGASPIKQNIPGSEFIQNSDDFLSLPELPNSVTFIGGGYISFEFASI  184
              +VL + ++++A+GA P    I G E +  SD+FL L ELP+ + F+GGGYISFEFA I
Sbjct  125  NKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHI  184

Query  185  VLAAGKEVHIIHHNSQPLKKFDPDFVAALISLMEEEGVHFHFDTAISKVEKKAGKLQI--  242
               AG EVHIIH+  +PL +FD D+V  L+    E G++ H++ ++  +EK  GK+++  
Sbjct  185  AARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVYA  244

Query  243  -SDENSFSLDTDIIIGATGRAPNIAHLSLENAEIEYTKKGITVNEKLQTIANSHIYACGD  301
               E+   +++DI+I ++GR P +  ++LE+++IE  K G+ VNE LQ+++N+++YA GD
Sbjct  245  RKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAGD  303

Query  302  VAASKGAPLTPVVSLEASIVAQNILEAN-KAMEYPAVPSVVFTSPKLASIGISLTEAKKQ  360
             AA+ G PLTPV S ++ +VA N+L +N K +EYP +PS VFT PK+AS+G+S  EAK+ 
Sbjct  304  AAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKNS  363

Query  361  ADRYEIKKHDTTSWYTYKRTNEALALATIIVDKNTQQIKGAHFLSEEADYMINYIALLMK  420
            +    +K+ + + W+TYKRTNE +A   +++D +++Q+ GAH++S+EAD +IN +A  ++
Sbjct  364  GRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAIR  423

Query  421  ANLTLTDLQSVIFAYPSPASDLTAL  445
              ++  +L+ +IFAYP++ASD++ +
Sbjct  424  FGISTKELKQMIFAYPTAASDIAHM  448

53) gshR in NC_018584


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

54) LMOG_00268 in NC_017545


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 195/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFLGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTSNNSHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +N+++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G PLTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

55) LM220_19550 in NC_021830


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

56) LM1816_17710 in NC_021829


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

57) M640_06135 in NC_021839


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

58) M644_08790 in NC_021827


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

59) M645_06670 in NC_021840


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1235),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 197/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

60) RB4396 in NC_005027


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1236),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 191/453 (43%), Positives = 313/453 (70%), Gaps = 6/453 (1%)

Query  1    MSSEHFDLVVLGTGPSGGTVATKIAKAGKRVALVDSRTFGGVCALRGCNPKKVYVNAGQL  60
            M +  +DL+V+GTG++G+  A+K  KAG  VA+VD R FGG CALRGC+PKKV   A++L
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   VDQIHRGDGKLISDASVKIDWKQLHAFKMEFTQPVAEKKEQSFQEDGIETFHGVARFVSP  120
            +D   R   + ++ + V I+WK+L  FK  FT+ V+EKKE++++ +GI+T+HG A FVS 
Sbjct  61   IDWNKRMVKNGVP-SEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  DTIDVVGTKLTADRFLIGTGGRPRELSFDGAEHVTRSDEFLELESMPEHVVFIGGGYISM  180
            D ++V    L + +FLI++G++P  L++ G EH+T SDEFLEL+ +P+++VF+GGGYIS 
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFAGVVARAGSRVTVIEMNNQILSGFDPDLVNQLTDSLREHGIRFQMNAEIIGIDKSADG  240
            EFA + ARAGS V +I+  ++ L  FD DLV+ L +  +E GI+ +++  + +I+K  +G
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEK-EQG  238

Query  241  HLQVHLANEQ--SPIVCGLVVHGAGRVPNIDELCLSQGEIEHGEKGIAVNQFMQNPTNPR  298
             ++V   + +  + +  ++V+HGAGRVP +D + L +G+IE+   G+ VN+++Q+ +NP 
Sbjct  239  KFHVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPN  297

Query  299  VFATGDCADNGMPRLTPVANEDARIAAKNLFSETLERTPDYGQVPKVAFTIPSIASVGLS  358
            V+A+GD A  +   LTPVA+ D+++ A NL+     +  +Y  +P   FT+P +ASVG+S
Sbjct  298  VYAAGDAAATDGLPLTPVASADSHVVASNLLKGN-SKKIEYPVIPSAVFTVPKMASVGMS  356

Query  359  EEAARDSNDNLTVLSDDISSWGSVRKTGPTVAGYKILIDSKTDAILGAHLLGPSAEETIS  418
            EE A++S  N+ V   +IS W + ++T    A++K+LID  +D ++GAHL++  A+E I+
Sbjct  357  EEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELIN  416

Query  419  LFALAMKFNLTATDMKSTLFAFPTFASDVRSML  451
             FA A++F +++ ++K  +FA+PT ASD+  ML
Sbjct  417  HFATAIRFGISTKELKQMIFAYPTAASDIAHML  449

61) MUO_07390 in NC_017728


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

62) Lm4b_01443 in NC_012488


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

63) gshR in NC_018642


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

64) M637_10145 in NC_021824


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 320/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDSDFVAALVTHMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+   KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

65) LMRG_00885 in NC_017544


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 195/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAALTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G +LTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

66) gshR in NC_018592


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 195/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL  240
            FA IA  AG +VHIIH+   PL +FD D+V  L+ + K+ GI+ H++  +  IE++ GK+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--KGKDSFS-LQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIY  297
            H+  + K+ ++ +++D++I ++GR+P +  ++LE+++I+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAALTPVVSLEAALVAKNVI-GGNEKITYPAIPSVVFTSPKLASIGISTEE  356
            A GD AAT G +LTPV S ++ +VA N++ G + KI YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIA  416
            AK +  + ++K+ + + W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

67) PB2503_12394 in NC_014414


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  328 bits (1231),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 210/451 (47%), Positives = 319/451 (71%), Gaps = 5/451 (1%)

Query  1    MKDAYDLIVIgggtggngVARMAAKAGWNVASIDSLPYGGTCALRGCDPKKMLVAVTEGV  60
            M   YDLIVIG G++G+  A    KAGWNVA +D  P+GGTCALRGCDPKK+L + +E +
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DWADRMKGNGLKMQPSVDWPEMIAFKRTFTDAMPPRIEAGMEKAGIDVLHGEARFTGADS  120
            DW  RM  NG+  + S++W +++ FKRTFTD +P + E +++K GID  HG+A F + D 
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  IELNGEILRAKHFHIATGARPITLNIPGEAYlttsteflelteRPDRIAFVGGGFIAMEF  180
            +E+N E+L + HF IA+GA+P  L I GE  LT S EFLEL E P+RI FVGGG+I+ EF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHIARRAGASEVTVLEMAERPLGTFDDDLVEILVEGTEELGIDLRTKAKVLAIEKQGEEF  240
            AHIA RAG SEV +++ ++RPL  FD DLV+IL+E + E+GI+++ +  V +IEK+   F
Sbjct  182  AHIAARAG-SEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  IVTVEGAGGAETLTCDLVVHGTGRVPNIDGLNLEAAGVEYTRRGIQVNASMRT-SNPAVF  299
             V      +   +  D+V+HG+GRVP +D +NLE + +E  ++G++VN  +++ SNP V+
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  300  AAGDCADSGP-NLTPVSAFEGRVAGKNLLAGKDERQVKYPPIPSVVFTLPMVATVGLSEA  358
            AAGD A ++   LTPV++ +++V + NLL G + +++ YP IPS VFT+P +A+VG+SE 
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKG-NSKKIEYPVIPSAVFTVPKMASVGMSEE  358

Query  359  AARKQGLKFDIHFEKTHDWYSSMRVGAKRTAYKVLVEQDTGKILGAHLIGPGAEEQINLF  418
             A++ G ++ +   +  DW++  R     +A+KVL+++D+++++GAHLI+  A+E IN F
Sbjct  359  EAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHF  418

Query  419  AMAMRAGQTANQIKAMIFAYPSYASDIGSMV  449
            A A+R G +++++K MIFAYP+ ASDI+ M+
Sbjct  419  ATAIRFGISTKELKQMIFAYPTAASDIAHML  449

68) gshR in NC_018593


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  328 bits (1229),  Expect = 5e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R  GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE +  +++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKII-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRETGQIKGAHFLSEEADYMINYIA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +++Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLNLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

69) LMOf2365_1452 in NC_002973


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  327 bits (1226),  Expect = 8e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASIQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G AS+   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

70) gor_2 in NC_019556


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  327 bits (1226),  Expect = 8e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASIQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G AS+   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

71) gshR in NC_018585


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  327 bits (1226),  Expect = 8e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASIQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G AS+   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

72) M638_09880 in NC_021825


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  327 bits (1226),  Expect = 8e-91, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 321/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAREA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENFQEAGIETFFGAASIQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E ++  GI+T+ G AS+   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  ++++++ ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  +G EVHIIH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMI-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYVA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +S+Q+ GAH++S+EAD +IN  A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLSDLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

73) ZPR_4602 in NC_014041


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  327 bits (1225),  Expect = 9e-91, Method: Compositional matrix adjust.
 Identities = 206/452 (46%), Positives = 312/452 (70%), Gaps = 5/452 (1%)

Query  1    MGIEEFDVFVIGTGTAGKGVAKDCAEAGWKVAIADNREYGGTCPNRGCDPKKVLVGITEI  60
            M    +D++VIGTG+AG   A  C  AGW+VA+ D+R +GGTC+ RGCDPKKVL G +E+
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   IERSQNMLGLGISKMPEVNWEDLQKFKYKFTGAIPAATEKDLAALGIKMYHQSPKFLDEN  120
            I++++ M+  G++    +NW DL +FK  FT+ +P   E  L   GI  YH ++ F+ E+
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TLSVEGktvktkkiviATGNKPMPLKIPGAELMLNSDDFLELEKLPESMIFIGAGYIGME  180
             L V+   +    ++IA+G KP PL I G E +  SD+FLEL+ LP+ ++F+G+GYI+ E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHIAARLGVEVTVIDTEPRPLSNFDEDMVAHLTEASEAIGIKFIFNAKASKVEKLRKYL  240
            FAHIAAR G EV +I+   RPL NFD D+V  L E S  IGI+  ++     +EK +  +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  RVTAETKNGEEISA-KAELIFNTAGRVPSIDELELEKGNVAFTNKGITVNEHLQNTSNPS  299
            +V A  K  E+I+   A+++++ AGRVP++D ++LEKGN+   + G+ VNE LQ+ SNP+
Sbjct  241  HVYARKK--EDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPN  297

Query  300  VYACGDVSDSEGLPLTPLSSQESRVVSANLLGKYNKTEAHYPPQPSVVFTLPNVASVGLS  359
            VYA GD + ++GLPLTP++S +S+VV++NLL K N    +YP  PS VFT+P++ASVG+S
Sbjct  298  VYAAGDAAATDGLPLTPVASADSHVVASNLL-KGNSKKIEYPVIPSAVFTVPKMASVGMS  356

Query  360  EQQAKERGFDYVVKHKSVPSWFNSKRIANQHYAFKVIKDKETEKVLGAHLVGPDAGEMIN  419
            E++AK+ G +  VK+K+++ WF  KR  ++  AFKV+ D ++++V+GAHL++ +A+E+IN
Sbjct  357  EEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELIN  416

Query  420  MFVMAMCGGLSCHDLKAMIFAYPTWSNDIKGM  451
             F  A+  G+S  +LK MIFAYPT ++DI  M
Sbjct  417  HFATAIRFGISTKELKQMIFAYPTAASDIAHM  448

74) LMHCC_1135 in NC_011660


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  326 bits (1224),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 322/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKYTYDVVIIGSGASGTTVAFEAQAAGLKVAVVEERSWGGTCVLRGCDPKKVLVGASEA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA+E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLESFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E+++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHMIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVH+IH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKII-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRETGQIKGAHFLSEEADYIINYIA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +++Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

75) gor in NC_017537


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  326 bits (1224),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 322/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKYTYDVVIIGSGASGTTVAFEAQAAGLKVAVVEERSWGGTCVLRGCDPKKVLVGASEA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA+E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLESFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E+++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHMIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVH+IH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKII-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRETGQIKGAHFLSEEADYIINYIA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +++Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

76) gshR in NC_017529


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  326 bits (1224),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 196/449 (44%), Positives = 322/449 (72%), Gaps = 6/449 (1%)

Query  1    MAKYTYDVVIIGSGASGTTVAFEAQAAGLKVAVVEERSWGGTCVLRGCDPKKVLVGASEA  60
            M+K  YD+++IG+G++G+  A   + AG +VA+V++R+ GGTC LRGCDPKKVL GA+E 
Sbjct  2    MTK-KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   RNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLESFQEAGIETFFGAASFQDSH  120
             + + R+  +G+    +I+W DLM FK TF ++VPE + E+++  GI+T+ G ASF   +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLQVGDDLIYAEKIVIATGATPSTLKVEGQEYIQTSDDFLSLEKLPDSVVFIGGGYISFE  180
             L+V  +++ +  ++IA+GA P+ L + G+E +  SD+FL L+ LP+ +VF+GGGYISFE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FASIALAAGREVHMIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL  240
            FA IA  AG EVH+IH+   PL +FD D+V  L+ + KE GI+ H++  +  +E+   K+
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  HI--HGKDGFS-LQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIY  297
            H+  + K++++ +++D++I ++GR P +  ++LE++NI+  K G+ VNE LQ+ +NP++Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  298  ACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKII-YPAIPSVVFTSPKLASIGISAEE  356
            A GD AAT G PLTPV S ++  VA N++ G+ K I YP IPS VFT PK+AS+G+S EE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  357  AKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRETGQIKGAHFLSEEADYIINYIA  416
            AK    + ++K+ + ++W+TYKRTNE++A  K++ D +++Q+ GAH++S+EAD +IN +A
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  417  ILMKANLTLADLQSVIFAYPSPASDLTAL  445
              ++  ++  +L+ +IFAYP++ASD++ +
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHM  448

77) Mpal_0666 in NC_011832


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  324 bits (1215),  Expect = 6e-90, Method: Compositional matrix adjust.
 Identities = 200/447 (45%), Positives = 316/447 (71%), Gaps = 6/447 (1%)

Query  10   SKHYDLMVIGTGEAGPTIARRCRREGWSVAITDERSYGGTCGQRGCVPKKVLNGVAETVD  69
            +K YDL+VIGTG AG+  A +C + GW+VA+ D+R++GGTC+ RGC PKKVL+G AE +D
Sbjct  3    TKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELID  62

Query  70   RARRLKGDGIGGECHIEWADLIQFKRRFTGPVEARRTATLAKDGIVCLHGQARFTGRNEL  129
            + +R+  +G+ +E  I+W DL++FKR FT+ V  ++  +L K+GI   HG+A F + + L
Sbjct  63   WNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKL  122

Query  130  KVGDERVTARFIGIATGAVPLKLSIPGEELVATSDDFLAMESLPKRILFIGGGLisfefg  189
             V  E + +  + IA+GA P  L+I GEE ++ SD+FL ++ LP+RI+F+GGG ISFEF+
Sbjct  123  EVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFA  182

Query  190  fiaaaagasVTILHRSERLLKGFDPFLVGLLVESCREMGICIETDMPVSAVEQAGGHLRV  249
             IAA AG+ V I+HR++R L  FD  LV++L+E  +E+GI ++ + +V ++E+  G ++V
Sbjct  183  HIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHV  242

Query  250  LSRDRI----FEADMIVHGAGRVPNTAGLDLARGGVTTDRKGIVVNPYLQSVSNPSVYVA  305
             +R +     FEAD+++HGAGRVP + +++L +G +   + G+ VN YLQSVSNP+VY A
Sbjct  243  YARKKEDITRFEADIVIHGAGRVP-ALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAA  301

Query  306  GDANPRGR-PLSPVASRDGKSVAENILHGNTVVPDYSAVPTAVFTAPVLAAVGLGEEEAT  364
            GDA + +  PL+PVAS D+  VA N+L GN+   +Y+ +P+AVFT P +A+VG++EEEA 
Sbjct  302  GDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAK  361

Query  365  MRDIPVTVYRADTRDWYTTRRLELGRSGYTVLTDSPKGRILGAHLLGYNADEMINVFALA  424
              +  + V + +  DW+T +R + + +++ VL D   ++++GAHL++ +ADE+IN FA A
Sbjct  362  NSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATA  421

Query  425  IRRGLTLADLQEMDWAYPTAIHDINRI  451
            IR G++  +L++M  AYPTA  DI ++
Sbjct  422  IRFGISTKELKQMIFAYPTAASDIAHM  448

78) PHZ_c1498 in NC_011144


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  323 bits (1210),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 202/446 (46%), Positives = 323/446 (73%), Gaps = 3/446 (0%)

Query  4    YDLIVIGSGTaaqvavgrvraagwsvavIDHRPFGGTCALRGCDPKKMLVSGEEALDAAA  63
            YDLIVIG+G+A+ ++ ++   AGW+VA++D+RPFGGTCALRGCDPKK+L ++ E +D   
Sbjct  6    YDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWNK  65

Query  64   RMAGHGVEGALAIDWPGLMAFKRTFTDPIPAKQEARYAALGVDAFHGTARFVGPDRVAVD  123
            RM  +GV + ++I+W +LM FKRTFTD +P K+E      G+D++HG A FV+ D++ V+
Sbjct  66   RMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEVN  125

Query  124  GHTLQARHILIASGARPVPLGIPGEDLVVTSDAFMEIEALPRRIVLIGGGYVAAEFSHLV  183
             + L++ H+LIASGA+P PL I GE+ +  SD F+E++ LP+RIV++GGGY++ EF+H+ 
Sbjct  126  KEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHIA  185

Query  184  ARAGAEVTILQRAARLLPHFDPDAVGWLMPRFRELRIAVETGATVTRVEQSHDGLRVHAS  243
            ARAG+EV I++R+ R L +FD D V+ L+ + +E+ I V+   +V  +E+ ++ ++V A 
Sbjct  186  ARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVYAR  245

Query  244  RRDGPHLSVAADLVVHaagrgpdldaldlaagdvaardgrlQLNDHLQSVSNPRVYAAGD  303
            ++++      AD+V+H ++       ++L  G++  +   +++N+ LQSVSNP VYAAGD
Sbjct  246  KKEDIT-RFEADIVIH-GAGRVPALDMNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAGD  303

Query  304  AAGVGP-PLTPVSSHDAKVVAANLLDGPSHRPDYRGVPSVAFTVPAIAAVGLSEDEAHRQ  362
            AA+ +  PLTPV+S D+ VVA+NLL G S + +Y  +PS  FTVP +A+VG+SE+EA   
Sbjct  304  AAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKNS  363

Query  363  GLRFRVNAASTPDWFTARRLAERVYGHKVLIEEATDRILGAHLVGPHAEEVINLFGLAIR  422
            G  ++V+  + +DWFT +R  E   + KVLI+E +D+++GAHL++ +A+E+IN F+ AIR
Sbjct  364  GRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAIR  423

Query  423  HGLTAADLRSTMFAYPTGASDVSSML  448
             G+++ +L+  +FAYPT+ASD++ ML
Sbjct  424  FGISTKELKQMIFAYPTAASDIAHML  449

79) gorA in NC_015844


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  323 bits (1212),  Expect = 9e-90, Method: Compositional matrix adjust.
 Identities = 196/450 (44%), Positives = 311/450 (70%), Gaps = 2/450 (0%)

Query  1    MKVKKYDVFVIGSGAAGRTVAKACVKGGLTVGMADKREYGGTCANRGCDPKKVLLGATEV  60
            M  KKYD++VIG+G+AG   A  C K+G  V+M D R +GGTCA RGCDPKKVL GA+E+
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   IELSANLMGKGIKAVPGISWKKLMQYKGQFTLAVPRTTEEDLKTLGISLYHQSPKFLDEQ  120
            I+ +  ++ +G+ +  +I+WK LM++K  FT  VP   EE L+  GI  YH ++ F+ E+
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TLSVEGKTVRADKIIIATGYEPRNLHFKGSKHLKSSDDFLSQKKLPKKITFIGAGYVGME  180
             L V+   + +  ++IA+G  P  L +KG  HL  SD+FL    LP++I F+G+GY++ E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHIAARAGAKVTVIDSGKRPLKAFDADLVEGLRSYSKELGIDFVFNAKITKVEkarkkv  240
            FAHIAARAG+ V +I+ G+RPL  FD DLV+ L   SKE+GI+  ++  +  +EK + K 
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  kvfyrkkgkLESLASNVVFNTAGRVPAISTLQLEKGKVAFNENGIETNDYLQSISNTGVY  300
             V+ RKK  +  + +++V++ AGRVPA+  ++LEKG++  + +G++ N+YLQS+SN  VY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  -ACGDVSDKGLPLTPLSGIEGKVVAINVLEGNKEKMQVPVTPSVVYTLPNLASVGYSEEE  359
             A +  +  GLPLTP+++ ++ VVA N+L GN  K++ PV PS V+T+P++ASVG SEEE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  360  ATSRYKNVEVKFESVPSWFNARRVNAPVYAYKIILNQRTRKIVGAHLLGPNAGETINLFA  419
            A +  +N+ VK  +++ WF  +R N    A+K+++++ + ++VGAHL++ +A+E IN FA
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  420  MAIGQGMTAEQIKQTVFTYPSWSNDIKSMV  449
             AI  G+++ ++KQ +F+YP+ ++DI  M+
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

80) lse_1352 in NC_013891


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  322 bits (1206),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 191/445 (43%), Positives = 313/445 (71%), Gaps = 5/445 (1%)

Query  8    TYDVVVIGSGASGTSVAFETRAAGLSVAIVEERSWGGTCVLRGCDPKKVLVGAAEARNFS  67
             YD++VIG+G++G+  A     AG +VA+V++R+ GGTC LRGCDPKKVL GAAE  + +
Sbjct  5    KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWN  64

Query  68   KRLRGKGIKQAATISWSDLMAFKETFVEDVPEQRLQSFQEAGIETFFGKAQFQSKETLLV  127
            KR+  +G+    +I+W DLM FK TF +DVPE++ ++++  GI+T+ G+A F S + L V
Sbjct  65   KRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEV  124

Query  128  GEDLLHAKNIVLATGASPNKQDIPENDFILTSDDFLSLKHLPDSVTFIGGGYISFEFASI  187
              ++L++ ++++A+GA P    I  ++ +  SD+FL L +LP+ + F+GGGYISFEFA I
Sbjct  125  NKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHI  184

Query  188  ALAAGKEVHIIHHNSNPLKKFDPDFVAALVSLMEEEGVHFHFDTTISKVEKKAEKLQI--  245
            A  AG EVHIIH+   PL +FD D+V  L+    E G++ H++ ++  +EK   K+++  
Sbjct  185  AARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVYA  244

Query  246  -SGENDFVLQTDNIIGATGRTPNISHLDLEKAHIDYTKKGITVNEKLQTVSNPHIYACGD  304
               E+   +++D +I ++GR P +  ++LEK++I+  K G+ VNE LQ+VSNP++YA GD
Sbjct  245  RKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAGD  303

Query  305  VAATKGAPLTPVVSMEAAIVSQNIL-GADDAIHYPAIPSVVFTSPKLASIGITIQEAKEQ  363
             AAT G PLTPV S ++ +V+ N+L G    I+YP IPS VFT PK+AS+G++ +EAK+ 
Sbjct  304  AAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKNS  363

Query  364  PAKYQIKNHDTTNWYTYKRTNEPLALAKIIVDKSNQQIKGAHFLSEEADYMINYIAILMK  423
              + ++K+ + ++W+TYKRTNE +A  K+++D  ++Q+ GAH++S+EAD +IN +A  ++
Sbjct  364  GRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAIR  423

Query  424  ANLTFSDLQSVLFAYPSPASDLSAL  448
              ++  +L+ ++FAYP++ASD++ +
Sbjct  424  FGISTKELKQMIFAYPTAASDIAHM  448

81) Celal_1877 in NC_014934


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  321 bits (1204),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 208/450 (47%), Positives = 320/450 (72%), Gaps = 2/450 (0%)

Query  1    MANKKFDVFVIGGGSAGQAVAKTCAKAGLHVAITERRDYGGTCPLRGCDPKKALLAATEV  60
            M  KK+D++VIG GSAG   A  C KAG +VA+ + R +GGTC+LRGCDPKK L +A+E+
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   LEFAKNMNGNGIVKLPRLLWSDMQkfkkkftkpipkAAEESLVALGVVTFSGEASFLSED  120
            ++  K M  NG+     + W D+ +FK+ FT  +P   EE+L   G+ T+ G+ASF+SED
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TMVVGDEIIEADKFVIATGLMPLELPIEGAEYLKMSDDFLNLKKLPEQLVFVGGGYIGME  180
             + V  E++E+  F+IA+G  P  LPI G E L  SD+FL+L  LP+++VFVGGGYI+ E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHMAARAGAKVTVIHSHERPLNEFDPDLVDVLTDYSKKIGIKFILNAkvnkvkkgkkkf  240
            FAH+AARAG+ V +IH  +RPL++FD DLVD+L + SK IGI+  L+  V+ + K + KF
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  kvHFEQNGHTNHIKANMVFNTAGRVPAIAMLELEKANVAYSAKGIEVNEYLQNTKNKNVY  300
             V   ++ +  ++ A++V++ AGRVPA+ M +LEK+N+     G++VNEYLQ+  N NVY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALDM-NLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  -ACGDVSEHGLPLTSMTGPEANTVSANILEGNKAKINTPVIPSVVYTLPNIASVGYSEEE  359
             A +  + +GLPLT++++++++ V++N+L GN  KI+ PVIPS V+T+P++ASVG SEEE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  360  AKKRYKNVTVNHESATDWFNARRINAPVYAYKVLVNERTKAIVGAHIIGPHAGETINLFS  419
            AK+  +N+ V++ + +DWF  +R N    A+KVL++E +  +VGAH+I+ +A+E IN F+
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  420  MAIRKEMTIDDMKEIIFAYPSWGYDVNRML  449
             AIR  ++  ++K++IFAYP+ + D+ +ML
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

82) Krodi_1025 in NC_015496


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  320 bits (1199),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 199/445 (45%), Positives = 305/445 (69%), Gaps = 2/445 (0%)

Query  6    YDIFVIGTGSAGRQVATRCAKAGMKVAIADNREYGGTCANRGCDPKKVLLNASEIIARTS  65
            YD++VIGTGSAG   A++C KAG +VA+ D+R +GGTCA RGCDPKKVL  A+E+I +  
Sbjct  6    YDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWNK  65

Query  66   HMAEVGVTEVATINWQALQQFKEKFVSAMPVKTEDSLEQAGITMYHQSPEFIEEGLLIVE  125
            +M   GV    +INW+ L +FK  F   +P K E++L++ GI  YH ++ F+ E+ L V+
Sbjct  66   RMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEVN  125

Query  126  GKKVTVDKVVIATGLIPRPLHFKGAELFKTSDDFLELPELPKSIIFVGGGYIAMEFAHIA  185
               +     +IA+G  P PL +KG E +  SD+FLEL ELP+ I+FVGGGYI+ EFAHIA
Sbjct  126  KEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHIA  185

Query  186  ARCGVDVTIIERGERVLKMFDESITSLLQEASTDIGIKFIFEADVIGAEMLQKNTRVHYK  245
            AR G +V II+RG+R L  FD  +  +L E S +IGI+  ++  V + E  Q + +V  +
Sbjct  186  ARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVYAR  245

Query  246  QDGKEHKLKAEMVFNTSGRVPSIDMLALDKGNVEATPRGIKVNKYLQSVSNPNVYACGDV  305
            +     ++ A++V++ +GRVP++DM  L+KGN+E   +G+ VN YLQSVSNPNVYA GD 
Sbjct  246  KKEDITRFEADIVIHGAGRVPALDM-NLEKGNIERKKHGVHVNEYLQSVSNPNVYAAGDA  304

Query  306  ADsgslpltplsslEGKHVGMQLATGERKAYTFPAIPTAVYTTPQLATVGITEQQAKAEG  365
            A +++LPLTP++S ++  V+ +L  G+ K   +P IP+AV+T P++A+VG++E++AK  G
Sbjct  305  AATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKNSG  364

Query  366  IEYKVLSEHVPDWFSIKRLNSPYYCYKTL-KGPNDEILGAEILAPEASEMINLFAMAIQQ  424
             + KV   +++DWF+ KR N  +  +K L    +D+++GA++++ EA E+IN FA AI+ 
Sbjct  365  RNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAIRF  424

Query  425  KMTCTQFRETIFAYPTFASDMQSMV  449
             ++  ++++ IFAYPT ASD+  M+
Sbjct  425  GISTKELKQMIFAYPTAASDIAHML  449

83) gor in NC_003552


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  320 bits (1201),  Expect = 7e-89, Method: Compositional matrix adjust.
 Identities = 201/455 (45%), Positives = 322/455 (71%), Gaps = 12/455 (2%)

Query  1    MEKEYDiiilgtgtagrtlagraKSSGLKFAIIDSREYGGTCPLRGCDPKKVLAGASEAT  60
            M K YD+I++GTG+AG   A++ + +G + A++D R +GGTC+LRGCDPKKVL GA+E  
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DWNNRLIGKGAGTEKPLEINWSSLIEFKRTFTRDYPRETEKMFADMGIDMYHGRANFENE  120
            DWN+R++ +G  +E  + INW  L++FKRTFT D P   E  +   GID YHG A+F +E
Sbjct  62   DWNKRMVKNGVPSE--VSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  NTILVGKDKLKGKYIFLATGSKPRKLNIPGEEYLITSEEFMETEKFPEKIIFVGGGYVSF  180
            + + V K+ L G  +++A+G+KP  L I GEE L  S+EF+E + +P++I+FVGGGY+SF
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFAHIALRAGAEVLILHRSEKPLRDFDSEMADLLVRASEAAGMRILTDRPVVAVEREGDR  240
            EFAHIA RAG+EV I+HR+++PL +FD ++ D+L+  S   G+++  +++V ++E+E ++
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  241  FLVRAEYKTETGSETQTFNADMVVNGAGRTPDIEDLRLENAGITAEKKGIIVDKHMQT-S  299
            F V   Y +    +   F+AD+V++GAGR P + D+ LE++ I   K G+ V+  +Q+ S
Sbjct  240  FHV---Y-ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVS  294

Query  300  NPRVY-AGGDCTAEGMQLTPVATLQGEIAAANIFDENRAEIDYTGIPSAVFTIPVLASVG  358
            NP VY AG+  +++G+ LTPVA+ ++++ A+N++  N   I+Y  IPSAVFT+P +ASVG
Sbjct  295  NPNVYAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVG  354

Query  359  ITEAKVNDKHRVI---FRDRSKWSTTRRAGLEFAASKIIVDETNDHIVGAHILGPNAEEA  415
            ++E   ++  R I    ++ S W T +R+  +FAA K+++DE +D++VGAH+++ +A+E 
Sbjct  355  MSEEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADEL  414

Query  416  INIFATAMQLGLRASSIKKMAFTYPTTCSDIRYML  450
            IN FATA+++G+ +  +K+M F+YPT+ SDI  ML
Sbjct  415  INHFATAIRFGISTKELKQMIFAYPTAASDIAHML  449

84) Dret_1336 in NC_013223


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  320 bits (1201),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 190/449 (43%), Positives = 316/449 (71%), Gaps = 3/449 (0%)

Query  1    MPERFDVIVLGTGPAGGVVAKECVAAGLSVAAIDKGDFGGTCPLRGCEPKKVLvdaadav  60
            M  ++D+IV+GTG+AG++ A  C  AG +VA +D   FGGTC+LRGC+PKKVL +AA+ +
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   araSNMQGNGVTGNFGLEWPSLHRFQRSFVEPIPKAVQHSLHKAGITTVQGVPVFTGANT  120
             +   M  NGV ++ +++W  L  F+R+F + +P   +++L+K GI T +G + F + + 
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  LSVEGRQFEAEHIVIATGAQPRQLPVPGNDLALTSDDFFHLSSLPSRLVFVGGGFISFEF  180
            L V+   +E+ H++IA+GA+P  LP+ G++    SD+F++L  LP R+VFVGGG+ISFEF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHVAALAGAEVSIVHRSERVLRPFDPDLVARVEEASRQAGIRIYKDTPVHSL-SEDGSEV  239
            AH+AA AG+EV I+HR++R L  FD DLV  + E S++ GI++  + +V+S+  E+G   
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  240  VLTAGPEGTQRFVADAVVNAIGRVPSIDGLDLENAGIEWSEHGVRVNEFMQSVSNPAIYA  299
            V +   E+  RF AD V+++ GRVP++D ++LE++ IE+  HGV+VNE++QSVSNP +YA
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  300  AGDVAEPGQ-ALTPVAVMHAETVVHNILNGPSKTADHSGTAATLFTYPPLARVGMLESEA  358
            AGD A  +  +LTPVA  +++ V  N+L+G SK  + +  ++++FT P +A VGM E EA
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  359  RETDPDCVVKHRHSENWSEYQRLGQQYAGYKIVFSGDRQRVLGAHLLGDGAEEVANVFAL  418
            ++++ +  VK+++  +W  Y+R  +++A++K+++  D ++V+GAHL+++ A+E+ N FA 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  419  AVRKGLSVASLQDMLWAYPSFGYTLRHML  447
            A+R G+S   L++M+ AYP+ +  + HML
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

85) ELI_09980 in NC_007722


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  317 bits (1189),  Expect = 7e-88, Method: Compositional matrix adjust.
 Identities = 198/449 (45%), Positives = 315/449 (71%), Gaps = 8/449 (1%)

Query  1    MAEAFDFVAIGSGTAAQVAVHQMANAGKRCAVIDYRPYGGTCALRGCDPKKMMVSGEEAL  60
            M+  +D++ IG+G+A+ ++  +  +AG   A++D RP+GGTCALRGCDPKK++ ++ E +
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   AAYRRMKGKGIKGSVSIDWADLQAFKRSFTDPVPEKQEARYERKGVATFHGAARFAGPDR  120
               +RM  +G+ + VSI+W DL  FKR+FTD VPEK+E   +++G+ T+HG A F + D+
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  IVIGDRELSFSHALIATGAEPRPLGIEGEELLIHSDAFLELKTLPDRIVFVGGGYIAAEF  180
            + +    L  SH LIA+GA P PL I GEE L  SD FLEL  LP+RIVFVGGGYI+ EF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHLAARAGAKVTIFQRG-RILKAFDPDTVDWLMPSFDDLGIEI-VDAEVDRVTKKGSVLT  238
            AH+AARAG+ V I++RG R L  FD D VD L+    ++GI++ ++  V+ + K  + + 
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  239  VHAGDR----RIEGSLVVHAAGRIPAIGSLDLEAGDVACDAGRLALTAQLRSQSNPKVFA  294
            V A  +    R+E+ +V+H+AGR+PA++ ++LE G++      + +   L+S SNP+V+A
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  295  AGDAAANGP-PLTPVSSNDAKVVVENILDDTGRTPNYRGVPSALFTEPPAARVGMLESEA  353
            AGDAAA +  PLTPV+S D+ VV  N+L + ++  +Y  +PSA+FT P  A VGM E EA
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  354  REAGLDFTVHAGSHPGWFSARRLNEEIYGHKLLVENGTGRILGAHLVGPDADELVNIFGL  413
            +++G ++ V   + ++WF+ +R NE++ + K+L+++++++++GAHL++ +ADEL+N F+ 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  414  AMRHGLNADDIKSTMFAYPTAASDAGYML  442
            A+R G+++ ++K  +FAYPTAASD + ML
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

86) PP1Y_AT14593 in NC_015580


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  313 bits (1174),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 201/449 (45%), Positives = 314/449 (70%), Gaps = 8/449 (1%)

Query  1    MAEAFDFIAIGSGTAAQVAVHRMADAGKRCAVIDYRPYGGTCALRGCDPKKMMVSGEEAL  60
            M+  +D+I IG+G+A+ ++  +   AG   A++D RP+GGTCALRGCDPKK++ ++ E +
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   AAFRRMNGKGIRGSASINWGGLQAFKRSFTDPVPGKQEARYDRKGIATFHGAARFTGPDR  120
               +RM  +G+ +  SINW +L  FKR+FTD VP K+E   +++GI T+HG A F + D+
Sbjct  62   DWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDK  121

Query  121  LAVEDQELQFSHALIATGAIPRPLGITGEQLLTHSDAFLNLDTLPERIVFVGGGYIAAEF  180
            L V+ + L+ SH LIA+GA P PL I GE+ LT SD FL+LD LP+RIVFVGGGYI+ EF
Sbjct  122  LEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEF  181

Query  181  AHLAARAGSKVTIVQRG-RVLKAFDPDIVDWLMPSFGQLGIEI-VDAEVTGLRAAGETLE  238
            AH+AARAGS V I++RG R L  FD D+VD L+    ++GI++ ++  V ++      ++
Sbjct  182  AHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFH  241

Query  239  VEAGNRV----IETDLAVHAAGRGPALGKLDLEAGNVASDDERLLLTAQLRSQSNGKVFA  294
            V A ++     +E+D+ +H+AGR PAL+ ++LE GN+    + + +   L+S SN +V+A
Sbjct  242  VYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYA  300

Query  295  AGDAAAKGP-PLTPVSSHDAKVVVENILDNGDRTPNYDGVPSALFTEPPAARVGMLESEA  353
            AGDAAA +  PLTPV+S D+ VV  N+L    +  +Y  +PSA+FT P  A VGM E EA
Sbjct  301  AGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEA  360

Query  354  REAGLEFNVNAGSHPEWFSARRLNAQIYGHKLLIQVGTGRILGAHLVGPDADELINVFGL  413
            +++G +++V+  + ++WF+ +R N ++ + K+LI+ ++++++GAHL++ +ADELIN F+ 
Sbjct  361  KNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFAT  420

Query  414  AIRHGLTADDIKSTMFAYPTAASDAGYMV  442
            AIR G+++ ++K  +FAYPTAASD + M+
Sbjct  421  AIRFGISTKELKQMIFAYPTAASDIAHML  449

87) R2APBS1_2079 in NC_020541


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  310 bits (1163),  Expect = 7e-86, Method: Compositional matrix adjust.
 Identities = 178/443 (41%), Positives = 312/443 (71%), Gaps = 5/443 (1%)

Query  1    MIGAGTGGTGVARMAAAAGWKVAVVDSLPYGGTCALRGCDPKKMLIAVTEGVDWARNLKG  60
            +IG+G++G+  A     AGW+VA+VD  P+GGTCALRGCDPKK+L + +E +DW + +  
Sbjct  10   VIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWNKRMVK  69

Query  61   KGLRAQTAVDWPDMIAFKRSFTDLMSGRIEAGMQRAGVVPLHGQARFTGPNTIEVNGELL  120
            +G+ ++ +++W D++ FKR+FTD ++ + E ++++ G+   HG+A F + + +EVN E+L
Sbjct  70   NGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEVNKEVL  129

Query  121  TARHFHLATGARPMTLNIPGENLLITSTDFLELPERPDRVVFVGGGFIAMEFAHICKRAG  180
             + HF +A+GA+P  L I GE+ L  S +FLEL E P+R+VFVGGG+I+ EFAHI  RAG
Sbjct  130  EGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHIAARAG  189

Query  181  SRDVTVLEMMKRPLGNFDPDMVGMLSEATADLGIDLRTEARVLTIEQDGAGFIVTYETPQ  240
            S +V +++  +RPL NFD D+V++L E + ++GI+++ +  V +IE++ + F V     +
Sbjct  190  S-EVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVYARKKE  248

Query  241  GTQTIACDRVVHATGRVPNIEHLNLDAAGVAYGRKGIQVSPFMRT-TNPAIFAAGDCADS  299
            +   +  D V+H++GRVP ++ +NL+ + +   + G++V+ ++++ +NP ++AAGD A +
Sbjct  249  DITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAGDAAAT  307

Query  300  GP-NLTPVSANEGRIAGKNLLAGKDERAIHYPPIPSVVFTLPPVASVGLSEDAAREQGLD  358
            +   LTPV++ ++++ + NLL G + + I+YP IPS VFT+P +ASVG+SE+ A++ G +
Sbjct  308  DGLPLTPVASADSHVVASNLLKG-NSKKIEYPVIPSAVFTVPKMASVGMSEEEAKNSGRN  366

Query  359  FDAHFEITAQWYSSLRVGARHSAYKVLVEKGSGNILGAHLIGPGAEEQINllamamgagl  418
            +       ++W++  R     +A+KVL++ +S++++GAHLI+  A+E IN +A A+  G+
Sbjct  367  IKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAIRFGI  426

Query  419  TANKLKGIIFAYPSYASDISSMV  441
            +++ LK +IFAYP+ ASDI+ M+
Sbjct  427  STKELKQMIFAYPTAASDIAHML  449

88) Mbar_A0570 in NC_007355


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  306 bits (1145),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 192/455 (43%), Positives = 318/455 (70%), Gaps = 12/455 (2%)

Query  1    MENKYDiiiigtgtagrtfagKVAHSGLKIAIVDSREYGGTCPIRGCDPKEVLTNITKVI  60
            M +KYD+I+IGTG+AG   A+K   +G ++A+VD R +GGTC++RGCDPK VL   + +I
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DSSNRLMGKGVRIDAPLKLDWTSLIKFKKTFTEGYSSKTEKHLVGMGIDTYHGRAHFENQ  120
            D ++R++ +GV  + ++  +W  L++FK+TFT++ + K E  L   GIDTYHG A F ++
Sbjct  62   DWNKRMVKNGVPSEVSI--NWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  NTVVVGMDKLKGEHIFLATGAKPRTLNIPGEEYIITSEKLMETKKLPEKIIFIGGGYISM  180
            + + V  + L G H+++A+GAKP  L I GEE +  S+ ++E   LP++I+F+GGGYIS 
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFAHIARRTGAEVTILQRSEKVLRAFDSDMVDLLMKASKAAGIKILTNKPVISVEKDNNG  240
            EFAHIA R+G+EV I++R+++ L  FD D+VD+L+  SK  GI++  + +V S+EK++  
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQG-  238

Query  241  LILKVQSQSETEPEIQIFRADMVVQGAGRVADIEDLRLENARIKTEKGAIVVDKHMRT-S  299
               K +  +    +I  F AD+V++GAGRV+ + D+ LE++ I   K ++ V+  +++ S
Sbjct  239  ---KFHVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVS  294

Query  300  NSRIY-AGGDCALEGMQLTPVAALQGEVAAINVLEGDSAEADYTGIPSAVFTIPVLASVG  358
            N+ +Y AG+  A +G+ LTPVA+ +++V A N+L G+S   +Y  IPSAVFT+P +ASVG
Sbjct  295  NPNVYAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVG  354

Query  359  ISVAKDDD---KYKVIFQDRSNWYTTRKKGMEFAASKVIIDEANDRIMGAHILGPNAEEA  415
            +S     +   + KV  ++ S+W+T ++   +FAA KV+IDE +D+++GAH+++ +A+E 
Sbjct  355  MSEEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADEL  414

Query  416  INIFASVMRLGLKASDIKKLIFTYPTTCSDIPYML  450
            IN FA+ +R+G+ + ++K++IF+YPT+ SDI+ ML
Sbjct  415  INHFATAIRFGISTKELKQMIFAYPTAASDIAHML  449

89) MED152_07885 in NC_020830


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  302 bits (1133),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 181/447 (41%), Positives = 302/447 (68%), Gaps = 4/447 (0%)

Query  5    KYDVFVIGSGIAGQTAAEICAKEGLKVAIADNKAFGGTCAIRGCDPKKVMLQFAEITQKA  64
            KYD++VIG+G AG  +A  C K G +VA+ D+++FGGTCA+RGCDPKKV+   AE+ +  
Sbjct  5    KYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDWN  64

Query  65   KHLKGLGFTKLPKINWDDILKFKNNFTEAVPKSTEEDLADLDIDLYHQSPKFISKNKISV  124
            K++   G      INW D+++FK  FT+ VP   EE L   +ID YH ++ F+S +K+ V
Sbjct  65   KRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLEV  124

Query  125  EGKTVIADKFVIATGLIPRTLKFKGAEFLKTSDDFFNLKKLPKSVTFIGSGYIGMEFCFL  184
            +   + +  F+IA+G  P  L +KG E L  SD+F++L  LP+ + F+G+GYI+ EF  +
Sbjct  125  NKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAHI  184

Query  185  LSTLGCKVIMIDRGPRILSQFEKSLTEKIKQNLANNGVEFIFEADVLSVEKGRKKLKLNY  244
             +  G  V +I+RG R L +F+  L + + ++  + G++  ++  V S+EK + K+ + Y
Sbjct  185  AARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHV-Y  243

Query  245  KVGKEERS-LKSHIIFNTSGRVPSLEALNLENAAIKADESGVLVNDYLQSSSAKHVF-AC  302
               KE+ + + ++I+++ +GRVP+L+ +NLE++ I     GV VN+YLQS S  +V+ A 
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  303  GDVSSKSFPLTPLSGLQGYIVGHNILKARSKKFKNPLVPSIVFTDPNLAMVGYLEEEAKK  362
            +  ++ ++PLTP+++ ++ +V+ N+LK+ SKK+  P++PS VFT P++A VG  EEEAK+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  363  RYKNTKVYKGDASNWYNAKKENAPFYAYKIIVNKRTDQIVGAHLLSSEANETINIFTTAI  422
              +N KV + + S+W+  K+ N  F A+K++++  +DQ+VGAHL+S+EA+E IN F+TAI
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  423  NAKMTVNEFKKMIFTYPSYASDLKSMF  449
               ++ +E+K+MIF+YP+ ASD+  M+
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

90) CA2559_02575 in NC_014230


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  301 bits (1126),  Expect = 7e-83, Method: Compositional matrix adjust.
 Identities = 185/456 (41%), Positives = 304/456 (67%), Gaps = 8/456 (1%)

Query  1    MAYKHFDVFIIGSGIAGQTCAKKLAKEGLNVAIADDREFGGTCANRGCDPKKVIYGLTHI  60
            M  K +D+++IG+G AG   A K  K G NVA+ DDR FGGTCA RGCDPKKV+ G +++
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   LQRSNDLLGKGITTMPEYSWKDLMAYKCNFTDAVPAVTEEKLEDLNITLYHQSPEFIDQS  120
            +++++ ++ +G+ +    +WKDLM +K  FTD VP   EE L+   I  YH ++ F+ + 
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TISVEGKTVTADKFVIATGLHPRNLGFDGCKLMKVSDDFLELETLPETMIFVGAGYIGME  180
             + V+   + +  F+IA+G  P  L + G   +  SD+FLEL+ LP+ ++FVG+GYI+ E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FAHMAARCGVKVTVIDFAKRPLGNFDEDIVEELVKASKKLGIKFIFEADVRQVKHLRKNY  240
            FAH+AAR G  V +I+ ++RPL NFD D+V+ L+  SK +GI+  ++  V  +   + ++
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  EVEYLKDGKLQTAKAELIFNVAGRVPATEKLKLQKGNIEFNKNGIEVNSYLQNPTNKNVY  300
            +V   K   +    A+++++ AGRVPA + ++L+KGNIE +K+G++VN YLQ+ +N NVY
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  301  -ACGDVSDHAVPLTPFSGREGSTVATNILAELNSKTTSKKKITFPPTPSVCFTIPNVASV  359
             A +  + +++PLTP ++ ++  VA+N+L        + KKI +P  PS  FT+P++ASV
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLL------KGNSKKIEYPVIPSAVFTVPKMASV  353

Query  360  GILEADAKNESLEYIVKSGDGKDWYNARRVNTSVYAYKIIIHKETDKILGAHLIGPQASE  419
            G+ E +AKN + +  VK  +  DW+  +R N    A+K++I+ ++D+++GAHLI+ +A E
Sbjct  354  GMSEEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADE  413

Query  420  VINLFSMAIFKEMTAAELKQMVFAYPTWGTDVAAMV  455
            +IN F+ AI   +++ ELKQM+FAYPT ++D+A M+
Sbjct  414  LINHFATAIRFGISTKELKQMIFAYPTAASDIAHML  449

91) Dbac_1885 in NC_013173


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  294 bits (1103),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 187/450 (42%), Positives = 307/450 (69%), Gaps = 3/450 (0%)

Query  1    MKTRKFDVIVLGSGVAGGHVATRCHKAGLSVALVESHGFGGTCPLHGCEPKKVMADAAET  60
            M T+K+D+IV+G+G AG+  A++C+KAG +VA+V+ + FGGTC+L+GC+PKKV+ +AAE 
Sbjct  1    MMTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAEL  60

Query  61   VERFNNASGSGPVGSAKLDWVELMRFKRTFTDDLPDKIQKHYEKLGIHTFTAAGIFAGPN  120
            +++ +    +G  +   ++W +LM FKRTFTDD+P+K +   +K GI+T+ + + F + +
Sbjct  61   IDWNKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  TIVSGNSRLEASHICIATGSTPRELHIPGSSLLSSSNDFLAMPTLPERIAFIGGGFIafe  180
             +   +  LE+SH+ IA+G+ P  L I G   L+ S++FL +  LP+RI F+GGG+I+FE
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  mahiaaaagaHVTIVHRSQRFLKKFDADLVKRLAEHLEKMGVKFYQNCPPHSIEKDGSAL  240
             AHIAA AG++V I+HR+QR L +FD DLV  L E    +G++   + + +SIEK+ + +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  -VLKAGEDGSQSFAADAIFNAAGRIPNLADLDLPTGNIDTHKGGVAVNACMQSLSNPSVF  299
             V     ++   F AD ++++AGR+P L D++L  GNI+  K GV VN  +QS+SNP+V+
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  300  -AAGDVIAETMPLTPVASVEAEVVAKNIIEGPIHEISKDVTPFALFTYPPLAGVGMLEEE  358
             A++   ++ +PLTPVAS +++VVA N++ G    I   V P A+FT P +A+VGM EEE
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  359  AHEQGLGFDVIHGDSAGWSEYQRIGQQCAGFKLLVDKETRQLLGAHVLGDAAEETINLFA  418
            A + G  + V + + ++W  Y+R  ++ A+FK+L+D ++ Q++GAH++++ A+E IN FA
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  419  LAMRKKVDVDELRSMLWAYPSFGYAIKYMF  448
             A+R  +   EL+ M+ AYP+ +  I  M+
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

92) Exig_2162 in NC_010556


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  288 bits (1078),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 193/447 (44%), Positives = 310/447 (70%), Gaps = 11/447 (2%)

Query  2    RTYDCIVIGTGSAGNQAAYKFAEKGLNVAIIENFTPGGTCAQRGCDAKKILLTGSEAKDA  61
            + YD IVIGTGSAG+ +A K    G NVA++++   GGTCA RGCD+KK+L  ++E  D 
Sbjct  4    KKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELIDW  63

Query  62   VERLLGYGLKGLVSIDWRQLMERKNEYTRAIPEQTRNRYDEVGIDYYHGEPRFLSNKKLL  121
              R++  G+ + VSI+W++LM+ K  +T  +PE+  +  +  GID YHG++ F+S+ KL 
Sbjct  64   NKRMVKNGVPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSEDKLE  123

Query  122  VDDIELEADQFLIATGLRPRELSVPGSERFLNSNEFLELRDVPRRLVCIGGGYISFEFAH  181
            V+   LE+ +FLIA+G +P  L++ G E++  S+EFLEL ++P+R+V +GGGYISFEFAH
Sbjct  124  VNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFEFAH  183

Query  182  LARIAGSEVTILLRSG-ALKQFEQDLVSVLLEATQALGIKI--LHETEAVSYSDTTLTL-  237
            +A  AGSEV I+ R+  +L +F+ DLV +LLE ++ +GI++   H  E++   +  + + 
Sbjct  184  IAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKFHVY  243

Query  238  ----SDGTRLEADVVLNATGRVASIEHLQLEKAGVIYEEKGIHVNDYLQS-SASNIYAAG  292
                 D TR+EAD+V++++GRV++++ ++LEK+ +     G+HVN+YLQS S +N+YAAG
Sbjct  244  ARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVYAAG  302

Query  293  DVAVSGNPALTPFAGTEGRLAACNMLEGNTRRLELLPVPSIVFTTPNLAKVGQTEASLKQ  352
            D A ++  +LTP A++++++ A N+L GN++++E   +PS VFT P++A VG +E   K+
Sbjct  303  DAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEEAKN  362

Query  353  NNTRYRGKLIDTSSWQTNVRIKDPFARAKVLIGED-DQILGAHFIGVHAAELANYFSFAM  411
            +    + K  + S W T  R ++ FA  KVLI+ED DQ++GAH+I+ +A EL N F+ A+
Sbjct  363  SGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFATAI  422

Query  412  QHRIPSSALQKTSFAYPTPASDIASLL  438
            +  I++  L++  FAYPT+ASDIA +L
Sbjct  423  RFGISTKELKQMIFAYPTAASDIAHML  449

93) Desaf_0754 in NC_016629


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  286 bits (1070),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 312/452 (70%), Gaps = 8/452 (1%)

Query  1    MNKSVDLFIIgagvaggavakvarragWSVAMAEVDGLGGTCPLRGCEPKKVLWQAAETI  60
            M K  DL++IG+G AG+  A    +AGW+VAM +   +GGTC+LRGC+PKKVL  AAE I
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   -WRAAGARKNGLIDTQPRIDWPALMRFKRSFTEPVDASVDQSLHDLGVDVVRGQAEFLAE  119
             W     ++   + ++  I+W  LM FKR+FT+ V    +++L+  G+D  +G+A F++E
Sbjct  62   DWNKRMVKNG--VPSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  120  DRLTVGDREFQASHIFIGTGATPMRLPFEGAQLVTTSDGFLELDELPGSIVFIGGGYISF  179
            D+L V    +++SH++I++GA P  LP+ G + +T SD FLELDELP  IVF+GGGYISF
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  180  EFAHIAARCGVFCKIIQRGERALKLFDRDMAELVVAATRDLGVEVVIGEEVTDVQREGDR  239
            EFAHIAAR G    II+RG+R+L  FD D+ ++++  ++++G++V + + V  +++E ++
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  240  LRVHV--GPERRRLCDCEMVVHGAGRAPNLDGLNLDRAGVERAKRGVRVDAHFRSVSNPR  297
            ++V      +  R+ + ++V+HGAGR P LD +NL+++ +ER K+GV+V+  ++SVSNP 
Sbjct  240  FHVYARKKEDITRF-EADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPN  297

Query  298  VW-SAGDCADTPFQLTPVADMEAWTAAQNMVHGKEITVDYSAVPSVTFTLPPLASVGLTE  356
            V  +++  A   + LTPVA  ++   A N++ G+   ++Y+ +PS  FT+P +ASVG++E
Sbjct  298  VYAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSE  357

Query  357  EQARKKGLEMDVFSGDMsgwsssrrvgvgragYKLLVDKSTDRILGAHLFGHKAEEVINA  416
            E+A++ G ++ V   ++S+W + +R   + A++K+L+D  +D+++GAHL+++ A+E+IN 
Sbjct  358  EEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINH  417

Query  417  LALAMGHGLTARQLKTFPLAYPTGIYELRYML  448
            +A A+  G+++++LK   +AYPT+  ++  ML
Sbjct  418  FATAIRFGISTKELKQMIFAYPTAASDIAHML  449

94) Mbar_A3561 in NC_007355


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  285 bits (1067),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 184/455 (41%), Positives = 315/455 (70%), Gaps = 12/455 (2%)

Query  1    MEKDYDiiiigtgtAGRTLADKVAHSGLKIAIIDSGEYGGISPPRGCDTKKMFTDLAGVT  60
            M K YD+I+IGTG+AG   A K   +G ++A++D   +GG  + RGCD KK++ + A + 
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DSNNRLIEKGVGTNYPLKIDWPSLIEFKGKVTKECPGRIENHFVEMGIDTYHGKAYFENQ  120
            D N+R++ +GV ++  + I+W  L++FK   T + P + E+ +   GIDTYHG+A F ++
Sbjct  62   DWNKRMVKNGVPSE--VSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  NTIVAGEDKIKGEYIFLATGSKPRKLNISGEEYVTTSEEFMKTEKLPERIIFIGGGHISL  180
            + +    + + G  +++A+G+KP  L I GEE +T S+EF+  + LP+RI+F+GGG IS+
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFAHVARRAMSEVTILHRSERLLRHSDVDMVNLLIKATEAAGIKILMNKPVASIEKDANG  240
            EFAH+A RA SEV I+HR++R L + D+D+V++L+  +   GI++ ++ +V SIEK+   
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  241  FLVRTGSKSGTESETQSFRADMVIHGAGRVPNIEELHLEKAGIKIEKGAIVVDKYMRT-S  299
            F V +  K     +   F AD+VIHGAGRVP + +++LEK+ I   K ++ V+ Y+++ S
Sbjct  240  FHVYARKK----EDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVS  294

Query  300  NPRIY-AGGDCTSESLKLNSVAALQGEVAAANILNENSLEVDYTGVPSAVHAIPVLASVG  358
            NP +Y AG+  ++++L L +VA+ +++V A+N+L+ NS  ++Y  +PSAV ++P +ASVG
Sbjct  295  NPNVYAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVG  354

Query  359  TS--ASKNSDK-YKVIYQDRSNWYTTRKAGMEFAASKVIIDEANNRIVGAYILGPNAEEA  415
             S   +KNS++  KV  ++ S+W+T +++  +FAA KV+IDE ++++VGA +++ +A+E 
Sbjct  355  MSEEEAKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADEL  414

Query  416  INIFAAVIRLGLKASDIKKLVFTYPTTCSDIRYML  450
            IN FA+ IR+G+ + ++K+++F+YPT+ SDI  ML
Sbjct  415  INHFATAIRFGISTKELKQMIFAYPTAASDIAHML  449

95) Dacet_1815 in NC_013943


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  283 bits (1058),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 182/450 (41%), Positives = 314/450 (70%), Gaps = 3/450 (0%)

Query  1    MSKHYDVICIGTGGAGNTAAFKLAAAGKKVLICDYKQFGGTCAISGCDPKKVMITAAEFA  60
            M+K YD+I IGTG+AG+ +A K   AG +V + D + FGGTCA+ GCDPKKV+  AAE+ 
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DFHRRMASKGVVECDIRLSWKAMMAHKREFTGNHSEklkykydkkgidyiSGFATFTGEK  120
            D ++RM  +GV   ++ ++WK +M  KR FT++ +EK     +K+GID   G A+F +E 
Sbjct  62   DWNKRMVKNGV-PSEVSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSED  120

Query  121  SLKISGEEFTFDMAFIGTGSKPLVLPFNGFENVCDNECFLNLDELPKRLLFIGGGYISVE  180
             L ++ E +     +I++G+KP  LP++G E++  ++ FL+LDELP+R++F+GGGYIS E
Sbjct  121  KLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISFE  180

Query  181  FANIANAFGAETTIVQVDDRLVPSFEADIVDVMVESLRQKGINILTNGRVSSIEKLDGSY  240
            FA+IA   G+E  I++ ++R + +F+ D+VD+++E  ++ GI++  +  V SIEK +G +
Sbjct  181  FAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGKF  240

Query  241  RVIVDTPDGPVVRDVDLVIHGAGRVANVDGLDAGKAGVELSRGGVVVNSFMQT-TNPAIY  299
            +V     ++    + D+VIHGAGRV+ +D ++  K+ +E  + GV VN ++Q+ +NP +Y
Sbjct  241  HVYARKKEDITRFEADIVIHGAGRVPALD-MNLEKGNIERKKHGVHVNEYLQSVSNPNVY  299

Query  300  AGGDCTDTEGYLLSPIAFMEGYIAAHNMVNGNSKEPDYLNTGTVMFNVPGISAVGYTEKQ  359
            A+GD + T+G  L+P+A  ++ + A N+++GNSK  +Y    + +F VP +++VG +E +
Sbjct  300  AAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEEE  359

Query  360  AADAGLDFEVKFERTDHWFTSFRTIEHFSAYKVLIEKGTGRILGAHIIGQHAEDIINLFV  419
            A ++G ++ VK     +WFT  RT E+F+A+KVLI+ ++++++GAH+I+++A+++IN F 
Sbjct  360  AKNSGRNIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINHFA  419

Query  420  IAIKQDLKISDLKKILYAYPTASSDILHMV  449
             AI+ ++   +LK++++AYPTA+SDI HM+
Sbjct  420  TAIRFGISTKELKQMIFAYPTAASDIAHML  449

96) MA1019 in NC_003552


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 187/452 (42%), Positives = 311/452 (69%), Gaps = 10/452 (2%)

Query  1    MEKDYDiiiigtgtSGRTFADKVASSGLKTAIIDSREYGGVSPPIGCDPKKMFVDIAEIT  60
            M K YD+I+IGTG++G   A K   +G + A++D R +GG  +  GCDPKK++ + AE+ 
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DWNNRLIGKGAGTQNPLKIDWPSLIEFRRTFTEKCSRKTENHFVELGIDTYHGKAYFENK  120
            DWN+R++ +G  ++  + I+W  L++F+RTFT+  + K E+ +   GIDTYHG+A F + 
Sbjct  62   DWNKRMVKNGVPSE--VSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  NTVAVGEDKLKGEYIFLATGAKPRKLNIPGEEYIITSGEFMETEKLPERIIFIGGGHISM  180
            + + V  + L G  +++A+GAKP  L I GEE +  S+EF+E + LP+RI+F+GGG IS 
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFSHITLKAGSEAIILHRSEKLLKSFDSDMVNFLINESEAAGIKIFTNKPVIAVEKEGNS  240
            EF+HI+ +AGSE  I+HR+++ L +FD D+V++L++ S   GI++  + +V ++EKE   
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  241  FLVRAGSESEIRSFRADMVVHGAGRVPYIEELHLEKAGVRVEGGAIEVDKHMRT-SNPRI  299
            F V A    +I  F AD+V+HGAGRVP + +++LEK+ +     +++V+  +++ SNP +
Sbjct  240  FHVYARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVSNPNV  298

Query  300  Y-AGGDCASEGMQLTPVAAYQGEVAAVNILTEDSVEADYKGIPSAVHTMPVLASVGIS--  356
            Y AG+  A++G+ LTPVA+ +++V A N+L  +S   +Y  IPSAV T+P +ASVG+S  
Sbjct  299  YAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVPKMASVGMSEE  358

Query  357  TVKDSDKYKIIFRDRSSEK--TGRSEGADFVASKVIIDEANDRIMGAHILGPNAGEAINI  414
              K+S++ +I  ++++     T +    DF A KV+IDE +D+++GAH+++ +A+E IN 
Sbjct  359  EAKNSGR-NIKVKQKNISDWFTYKRTNEDFAAFKVLIDEDSDQVVGAHLISNEADELINH  417

Query  415  FAAVMRLGLKASDMKKMIFSYPTVCSDIPYML  446
            FA+ +R+G+ + ++K+MIF+YPT  SDI+ ML
Sbjct  418  FATAIRFGISTKELKQMIFAYPTAASDIAHML  449

97) MM_0897 in NC_003901


> AB037671|68|G59|14021023|BAB47647.1|Staphylococcus_aureus_85/2082|-|42217..43566|merR|-|regulatory 
protein
Length=449

 Score =  243 bits (908),  Expect = 8e-66, Method: Compositional matrix adjust.
 Identities = 164/354 (47%), Positives = 249/354 (71%), Gaps = 9/354 (2%)

Query  1    MEKEYDiiiigtgtagrtlagraESSGMKFAIIDSREYGGTCPLRGCDPKKVLAGASEAT  60
            M K YD+I+IGTG+AG   A++ + +G + A++D R +GGTC+LRGCDPKKVL GA+E  
Sbjct  2    MTKKYDLIVIGTGSAGSITAAKCNKAGWNVAMVDDRPFGGTCALRGCDPKKVLHGAAELI  61

Query  61   DLNNRLIGKGAGTEEPLKIDWPSLIRFKRTFTEVYPREAEKMFADMGIDMYHGRARFKNE  120
            D N+R++ +G  +E  + I+W  L+ FKRTFT+  P   E  +   GID YHG A F +E
Sbjct  62   DWNKRMVKNGVPSE--VSINWKDLMNFKRTFTDDVPEKKEEALNKQGIDTYHGNASFVSE  119

Query  121  NTVIVGNDELKGKFIFLATGSKPRKLKIPGEEYLTTSEEFMELMELPEKIIFAGGGYISF  180
            + + V ++ L G  +++A+G+KP  L I GEE LT S+EF+EL ELP++I+F GGGYISF
Sbjct  120  DKLEVNKEVLEGSHFLIASGAKPTPLPIKGEEHLTYSDEFLELDELPQRIVFVGGGYISF  179

Query  181  EFTHIARRAGAEVLILHRSERPLGTFDPDLVDMLVRASEESGIKILTNRPVVAVEKAGDG  240
            EF+HIA RAG+EV I+HR++RPL  FD DLVD+L+  S E GI++  +++V ++EK  + 
Sbjct  180  EFAHIAARAGSEVHIIHRGQRPLENFDIDLVDILLEKSKEIGIQVHLQHSVESIEKEQGK  239

Query  241  FLVRTEYKTETGSEVQVFNADMVVNGAGRVPDIEDLQLENAGVRAEKKGIIVDKHMRT-S  299
            F V   Y +    ++  F+AD+V++GAGRVP + D++LE++ +   K G+ V+  +++ S
Sbjct  240  FHV---Y-ARKKEDITRFEADIVIHGAGRVPAL-DMNLEKGNIERKKHGVHVNEYLQSVS  294

Query  300  NPRVY-AGGDCTAEGIQLTPVATLQGEVAAANIFDRNGAEADYTGIPSAVFTHP  352
            NP VY AG+  +++G+ LTPVA+ +++V A+N++  N+   +Y  IPSAVFT P
Sbjct  295  NPNVYAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEYPVIPSAVFTVP  348