Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of SAOV_1974 gene of NC_017337_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAOV_1974
( YP_005737418.1 )

prophage integrase

NC_017337
(Staphylococcus aureus ED133)

4e-162

100

2) int
( YP_001332848.1 )

phage integrase

NC_009641
(Staphylococcus aureus Newman)

1e-160

3) SAOUHSC_02089
( YP_500581.1 )

phage family integrase

NC_007795
(Staphylococcus aureus NCTC 8325)

2e-160

4) CA347_1963
( YP_008128779.1 )

phage integrase family protein

NC_021554
(Staphylococcus aureus CA-347)

3e-160

5) SAA6008_01896
( YP_005745239.1 )

phage integrase

NC_017341
(Staphylococcus aureus JKD6008)

5e-160

6) SPSINT_0541
( YP_004148706.1 )

integrase

NC_014925
(Staphylococcus pseudintermedius HKU10-03)

2e-95

7) SARLGA251_07760
( YP_005754776.1 )

integrase

NC_017349
(Staphylococcus aureus LGA251)

2e-82

8) SA2981_0802
( YP_005741551.1 )

Integrase

NC_017340
(Staphylococcus aureus 04-02981)

3e-82

9) SaurJH1_0864
( YP_001316007.1 )

phage integrase family protein

NC_009632
(Staphylococcus aureus JH1)

3e-82

10) SaurJH9_0848
( YP_001246225.1 )

phage integrase family protein

NC_009487
(Staphylococcus aureus JH9)

3e-82

11) int
( YP_001441433.1 )

integrase

NC_009782
(Staphylococcus aureus Mu3)

4e-82

12) int
( NP_371371.1 )

integrase

NC_002758
(Staphylococcus aureus Mu50)

4e-82

13) SAAV_0818
( YP_003281741.1 )

integrase

NC_013450
(Staphylococcus aureus ED98)

8e-82

14) int
( YP_002633562.1 )

phage integrase

NC_012121
(Staphylococcus carnosus TM300)

3e-81

15) BTG_23700
( YP_006606185.1 )

Integrase

NC_018500
(Bacillus thuringiensis HD-771)

2e-75

• Sequence Alignments

1) SAOV_1974 in NC_017337


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  564 bits (2128),  Expect = 4e-162, Method: Compositional matrix adjust.
 Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120
            EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180
            VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240
            TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  241  PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH  300
            PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH  300

Query  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348
            SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD
Sbjct  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

2) int in NC_009641


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  559 bits (2110),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 341/348 (98%), Positives = 346/348 (99%), Gaps = 0/348 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   EYIFFNRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120
            EYIFF+RLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180
            VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNREIEYNLKKESSKGII  240
            TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNR IEYNLK+E+SKGII
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  241  PVPKLIREMLKNMYNESSKRYKYFDENYFIFGGLEPIRYVTYSYHFKSVFPNLKIHHLRH  300
            PVPKLIREMLKNMYNESS RYKYFDENYFIFGGLEPIRY+TYSYHFKSVFPNLKIHHLRH
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH  300

Query  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMNIFD  348
            SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAM+IFD
Sbjct  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

3) SAOUHSC_02089 in NC_007795


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  558 bits (2106),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 341/348 (98%), Positives = 347/348 (99%), Gaps = 0/348 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120
            EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  VDYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180
            V+YARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  181  TSRQLTRLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKKESSKGII  240
            TSRQLT+LLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLK+E+SKGII
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  241  PVPNLIREMLKNMYNESSKRYKYFDENYFIFGGLEPIRYVTYSYHFKSVFPNLKIHHLRH  300
            PVP+LIREMLKNMYNESS RYKYFDENYFIFGGLEPIRY+TYSYHFKSVFPNLKIHHLRH
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH  300

Query  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348
            SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD
Sbjct  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

4) CA347_1963 in NC_021554


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  557 bits (2104),  Expect = 3e-160, Method: Compositional matrix adjust.
 Identities = 340/348 (98%), Positives = 345/348 (99%), Gaps = 0/348 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   EYIFFNRLKNENLSARSIEKRTTEYNTHIKERFGNIPISKITTTQCTAFRNYLLNDAGLS  120
            EYIFF+RLKNENLSARSIEKRTTEYNTHIKERFGNIPI+KITTTQCTAFRNYLLNDAGLS
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180
            VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNREIEYNLKKENSKGII  240
            TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNR IEYNLK+E SKGII
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  241  PVPKLIREMLKNMYNESSKRYKYFDENYFIFGGLEPIRYVTYSYHFKSVFPNLKIHHLRH  300
            PVPKLIREMLKNMYNESS RYKYFDENYFIFGGLEPIRY+TYSYHFKSVFPNLKIHHLRH
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH  300

Query  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMNIFD  348
            SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAM+IFD
Sbjct  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

5) SAA6008_01896 in NC_017341


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  557 bits (2101),  Expect = 5e-160, Method: Compositional matrix adjust.
 Identities = 340/348 (98%), Positives = 347/348 (99%), Gaps = 0/348 (0%)

Query  1    MPVYKDGNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60
            MPVYKD+NTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120
            EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  VDYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180
            V+YARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  181  TSRQLTRLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKKESSKGII  240
            TSRQLT+LLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLK+E+SKGII
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  241  PVPNLIREMLKNMYNESSKRYKYFDENYFIFGGLEPIRYVTYSYHFKSVFPNLKIHHLRH  300
            PVP+LIREMLKNMYNESS RYKYFDENYFIFGGLEPIRY+TYSYHFKSVFPNLKIHHLRH
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH  300

Query  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348
            SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD
Sbjct  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

6) SPSINT_0541 in NC_014925


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  342 bits (1285),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 187/349 (54%), Positives = 267/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDDKSDKWYFTVRYKDIYGNNKRKLKRGFKTKREAKSAEAEFLTEVNEGYSDSNTY  60
            MPVYKDD+++KWYF++RYKD+YGNNKRK+KRGF  K++AK AE+EF+ +V+ GYSD++ +
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   EYTFYHYLDNSDLRPKTRKRKENEYKLHIKPKFGHIKMNKITQQQCQEFRKYLMDNIN-S  119
            EY F++ L N +L +++  ++  EY+ HIK +FG+I + KIT  QC  FR+YL+++   S
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  120  FNSARTIWSGFKVVINYAKKYFGLRVDPTISIKPIPRTKPKPNFMMREEFEDRIKEVEEQ  179
               AR++W+GFK VINYAKK + L  DPT+S+ PIPRTKP+++F+ REEF++++ ++ ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRVGEAMALVWTDYNKYKKEISINKTMDISNRSIYPRPKTDSSEDIV  239
              R+L  L+FY+GLR+GEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINEMLSERYQREKQMNKYFDEQNYFIFGGLAPKHYSHVHKKFNKAFPNYSIHALR  299
            P+PK+I EML + Y+      KYFDE NYFIFGGL P +Y      F+  FPN  IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

7) SARLGA251_07760 in NC_017349


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  298 bits (1118),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 188/349 (54%), Positives = 267/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMQRGFSTKREAKSAEAIFLNDVNEGYSDSKTF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKM+RGF  K++AK AE+ F+++V+ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYVFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNKITQNQCQEFRKYLIENVAST  120
            +Y+F + L N +L +++  ++  EY+ H+K +FG+I + KIT  QC  FR+YL+++ + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  NS-ARTIWSGFKVVINYAKKYFGLRTDPTisikpiprvkpkpkFMMreefeerikdieeQ  179
             + AR++W+GFK VINYAKK + L  DPT+S+ PIPR KP++KF+ REEF+E++ +I ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRIGEAMALVWTDYNKYKKEISINKTMDISNRTIYPRPKTDSSEDIV  239
              R+L  L+FY+GLRIGEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINTMLTERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALR  299
            P+PK+I  ML +  +      KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

8) SA2981_0802 in NC_017340


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  298 bits (1117),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 188/349 (54%), Positives = 267/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMQRGFSTKREAKRAEAIFLNDVNEGYSDSKTF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKM+RGF  K++AK AE+ F+++V+ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYVFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNKITQNQCQEFRKYLIENVAST  120
            +Y+F + L N +L +++  ++  EY+ H+K +FG+I + KIT  QC  FR+YL+++ + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  NS-ARTIWSGFKVVINYAKKYFGLRTDPTisikpiprvkpkpkFMMreefeerikdieeQ  179
             + AR++W+GFK VINYAKK + L  DPT+S+ PIPR KP++KF+ REEF+E++ +I ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRIGEAMALVWTDYNKYKKEISINKTMDISNRTIFPRPKTDSSEDIV  239
              R+L  L+FY+GLRIGEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINTMLTERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALR  299
            P+PK+I  ML +  +      KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

9) SaurJH1_0864 in NC_009632


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  298 bits (1117),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 188/349 (54%), Positives = 267/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMQRGFSTKREAKRAEAIFLNDVNEGYSDSKTF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKM+RGF  K++AK AE+ F+++V+ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYVFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNKITQNQCQEFRKYLIENVAST  120
            +Y+F + L N +L +++  ++  EY+ H+K +FG+I + KIT  QC  FR+YL+++ + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  NS-ARTIWSGFKVVINYAKKYFGLRTDPTisikpiprvkpkpkFMMreefeerikdieeQ  179
             + AR++W+GFK VINYAKK + L  DPT+S+ PIPR KP++KF+ REEF+E++ +I ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRIGEAMALVWTDYNKYKKEISINKTMDISNRTIFPRPKTDSSEDIV  239
              R+L  L+FY+GLRIGEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINTMLTERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALR  299
            P+PK+I  ML +  +      KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

10) SaurJH9_0848 in NC_009487


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  298 bits (1117),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 188/349 (54%), Positives = 267/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMQRGFSTKREAKRAEAIFLNDVNEGYSDSKTF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKM+RGF  K++AK AE+ F+++V+ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYVFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNKITQNQCQEFRKYLIENVAST  120
            +Y+F + L N +L +++  ++  EY+ H+K +FG+I + KIT  QC  FR+YL+++ + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  NS-ARTIWSGFKVVINYAKKYFGLRTDPTisikpiprvkpkpkFMMreefeerikdieeQ  179
             + AR++W+GFK VINYAKK + L  DPT+S+ PIPR KP++KF+ REEF+E++ +I ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRIGEAMALVWTDYNKYKKEISINKTMDISNRTIFPRPKTDSSEDIV  239
              R+L  L+FY+GLRIGEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINTMLTERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALR  299
            P+PK+I  ML +  +      KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

11) int in NC_009782


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  298 bits (1116),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 188/349 (54%), Positives = 267/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMQRGFSTKREAKRAEAIFLNDVNEGYSDSKTF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKM+RGF  K++AK AE+ F+++V+ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYVFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNKITQNQCQEFRKYLIENVAST  120
            +Y+F + L N +L +++  ++  EY+ H+K +FG+I + KIT  QC  FR+YL+++ + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  NS-ARTIWSGFKVVINYAKKYFGLRTDPTisikpiprvkpkpkFMMreefeerikdieeQ  179
             + AR++W+GFK VINYAKK + L  DPT+S+ PIPR KP++KF+ REEF+E++ +I ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRIGEAMALVWTDYNKYKKEISINKTMDISNRTIYPRPKTDSSEDIV  239
              R+L  L+FY+GLRIGEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINTMLTERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALR  299
            P+PK+I  ML +  +      KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

12) int in NC_002758


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  298 bits (1116),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 188/349 (54%), Positives = 267/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMQRGFSTKREAKRAEAIFLNDVNEGYSDSKTF  60
            MPVYKDDNTGKWYFSIRYKDVYGNNKRKM+RGF  K++AK AE+ F+++V+ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYVFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNKITQNQCQEFRKYLIENVAST  120
            +Y+F + L N +L +++  ++  EY+ H+K +FG+I + KIT  QC  FR+YL+++ + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  NS-ARTIWSGFKVVINYAKKYFGLRTDPTisikpiprvkpkpkFMMreefeerikdieeQ  179
             + AR++W+GFK VINYAKK + L  DPT+S+ PIPR KP++KF+ REEF+E++ +I ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRIGEAMALVWTDYNKYKKEISINKTMDISNRTIYPRPKTDSSEDIV  239
              R+L  L+FY+GLRIGEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINTMLTERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALR  299
            P+PK+I  ML +  +      KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

13) SAAV_0818 in NC_013450


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  297 bits (1112),  Expect = 8e-82, Method: Compositional matrix adjust.
 Identities = 186/349 (54%), Positives = 266/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDESTNKWYFSIRYKDVYGNNKRKMQRGFSTKREAKSAEAIFLNDVNEGYSDSKTF  60
            MPVYKD++T KWYFSIRYKDVYGNNKRKM+RGF  K++AK AE+ F+++V+ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYIFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNKITQNQCQEFRKYLIENVAST  120
            +YIF + L N +L +++  ++  EY+ H+K +FG+I + KIT  QC  FR+YL+++ + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  NS-ARTIWSGFKVVINYAKKYFGLRTDPTisikpiprvkpkpkFMMreefeerikdieeQ  179
             + AR++W+GFK VINYAKK + L  DPT+S+ PIPR KP++KF+ REEF+E++ +I ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYRELFTLMFYTGLRIGEAMALVWTDYNKYKKEISINKTMDISNRTIYPRPKTDSSEDIV  239
              R+L  L+FY+GLRIGEA+AL W DY+K K EI +NK +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPKFINTMLTERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALR  299
            P+PK+I  ML +  +      KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

14) int in NC_012121


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  295 bits (1105),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 183/349 (53%), Positives = 268/349 (77%), Gaps = 2/349 (0%)

Query  1    MPVYKDSSTNKWYFSVRYKDVYGNNKRKMKRGYNTKREAKYAEAAFLNDINEGYSDSNTF  60
            MPVYKD +T KWYFS+RYKDVYGNNKRKMKRG++ K++AK AE+ F+++++ GYSD++ F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DYVFNHYLEHSDLRPKTKKRKINEYNRHFKDKFGHINMNKITQNQCQEFRKYLMDNIP-S  119
            +Y+F + L + +L +++  ++  EYN H+K++FG+I + KIT  QC  FR+YL+++   S
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  120  TNTARTIWSGFKVVINYAKKYFGLRTDptisikpipriktkpkYMLreefdervkeveeQ  179
               AR++W+GFK VINYAKK + L  DPT+S+ PIPR K ++K++ REEFDE+V ++ ++
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  DYQELFKLMFYTGLRIGEAMALVWTDYNKYKKEISIDKTMDISNRTIYPRPKTDSSEDIV  239
              ++L KL+FY+GLRIGEA+AL W DY+K K EI ++K +++SNR I    K ++S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  240  PLPNFINEMLAERYQREKAANKYFDERSYFIFGGIAPKHYSHVHKKFQKAFPQYNIHTLR  299
            P+P++I EML + Y+   +  KYFDE +YFIFGG+ P +Y      F+  FP+ +IH LR
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDE-NYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLR  299

Query  300  HSYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFD  348
            HSYASYL NNGVD+++L  LMRH++ITET+ TYSHLYT+KKH+A++IFD
Sbjct  300  HSYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348

15) BTG_23700 in NC_018500


> NC_017337_P4|67|G66|384548165|YP_005737418.1|Staphylococcus_aureus_subsp._aureus_ED133|+|41932..42978|-|SAOV_1974|prophage 
integrase
Length=348

 Score =  276 bits (1031),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 164/348 (48%), Positives = 250/348 (72%), Gaps = 2/348 (0%)

Query  1    MPVYKDKERKTWYFKVRYKDMYGRNKQKLKRGFKKRGDAILAEAEFVASIKDAFTDEVTF  60
            MPVYKD +   WYF +RYKD+YG NK+K+KRGF ++ DA LAE+EF+ ++K +++D+  F
Sbjct  1    MPVYKDDNTGKWYFSIRYKDVYGNNKRKMKRGFERKKDAKLAESEFIQNVKYGYSDNQPF  60

Query  61   DEVFEHNINFKTYKPKTIRRRTNEYNLHIKPRFGHIKVKDINTQQVLDFQKYlssslssP  120
            + +F + ++     +++I +RT EYN HIK RFG+I +  I T Q   F++YL +  + +
Sbjct  61   EYIFFDRLKNENLSARSIEKRTTEYNTHIKERFGNIPIGKITTTQCTAFRNYLLNDAGLS  120

Query  121  ES-ARTVYSNFKVLMNHAKRFYNLRYDPTLQVPTMPRGKKRIDFIKREDFDKRVQEFNMH  179
             + AR+V + FK ++N AK+ Y+L YDPTL V  +PR K +  FI RE+FD +V+++  +
Sbjct  121  VGYARSVWAGFKAVINYAKKHYKLLYDPTLSVTPIPRTKPQAKFITREEFDEKVEQITND  180

Query  180  YYKELTILMFYTGLRVGEALALKWIDIDLAEQQINVNKSWSLNERVLT-SVKTAASEAIV  238
              ++LT L+FY+GLR+GEALAL+W D D    +I+VNK  +L++R +  ++K  +S +I+
Sbjct  181  TSRQLTKLLFYSGLRIGEALALQWKDYDKIKGEIDVNKKINLSNRKIEYNLKRETSKGII  240

Query  239  PIPKLLVGMLGGIKKESAEKTYGFDENHFVFCGVTPyhynhyhkkykEVFPELRIHSLRH  298
            P+PKL+  ML  + +ES+ +   FDEN F+F G+ P +Y  Y   +K VFP+L+IH LRH
Sbjct  241  PVPKLIREMLKNMYNESSTRYKYFDENYFIFGGLEPIRYITYSYHFKSVFPNLKIHHLRH  300

Query  299  SYAAYLINKGVDIYLVKELMRHENIKETADTYGHLYIERKQKAMSVFD  346
            SYA+YLIN+GVD+YL+ ELMRH NI ET +TY+HLY ++K++AMS+FD
Sbjct  301  SYASYLINNGVDMYLLMELMRHSNITETIQTYSHLYTDKKHQAMSIFD  348