Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of t4294 gene of NC_004631_P3

157

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SSPA2378
( YP_002143223.1 )

positive regulator of late gene transcription

NC_011147
(Salmonella enterica AKU12601)

7e-29

100

2) SPA2555
( YP_151734.1 )

positive regulator of late gene transcription

NC_006511
(Salmonella enterica ATCC 9150)

7e-29

100

3) STY4600
( NP_458683.1 )

putative positive regulator of late gene transcription

NC_003198
(Salmonella enterica CT18)

7e-29

100

4) t4294
( NP_807891.1 )

positive regulator of late gene transcription

NC_004631
(Salmonella enterica Ty2)

7e-29

100

5) TY21A_21870
( YP_007928534.1 )

putative positive regulator of late gene transcription

NC_021176
(Salmonella enterica Ty21a)

7e-29

100

6) I137_12945
( YP_008382001.1 )

transcriptional regulator

NC_021984
(Salmonella enterica S06004)

1e-26

7) rlsB
( YP_001906539.1 )

Levansucrase regulator

NC_010694
(Erwinia tasmaniensis Et1/99)

7e-26

8) CSSP291_01815
( YP_007439250.1 )

positive regulator of late gene transcription

NC_020260
(Cronobacter sakazakii Sp291)

1e-25

9) STM2694
( NP_461622.1 )

late control-like protein

NC_003197
(Salmonella enterica LT2)

6e-22

10) SL1344_2665
( YP_005182561.1 )

putative positive regulator of late gene transcription

NC_016810
(Salmonella enterica SL1344)

6e-22

11) STM474_2817
( YP_005243666.1 )

late control-like protein

NC_016857
(Salmonella enterica ST4/74)

6e-22

12) STMDT12_C27460
( YP_005248442.1 )

late control-like protein

NC_016860
(Salmonella enterica T000240)

6e-22

13) STU288_13625
( YP_007903818.1 )

late control-like protein

NC_021151
(Salmonella enterica U288)

6e-22

14) ECENHK_16920
( YP_006579843.1 )

late control-like protein

NC_018405
(Enterobacter cloacae ENHKU01)

1e-21

15) CFSAN001992_19975
( YP_007473707.1 )

positive regulator of late gene transcription

NC_020307
(Salmonella enterica CFSAN001992)

2e-20

16) ogrK
( YP_003467282.1 )

prophage P2; transcriptional activator for bacteriophage P2 late genes

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-16

17) ogrK
( YP_003038845.1 )

prophage p2 ogr protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-16

18) PAGR_g0686
( YP_005991442.1 )

late control protein ogr/delta

NC_017554
(Pantoea ananatis PA13)

3e-16

19) PMI1970
( YP_002151693.1 )

positive regulator of phage late gene transcription

NC_010554
(Proteus mirabilis HI4320)

7e-16

20) ogrK
( YP_005817069.1 )

Late control gene B protein (GpB)

NC_017445
(Erwinia sp. Ejp617)

1e-15

21) KOX_15635
( YP_005019090.1 )

prophage P2 OGR-like protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

9e-16

22) KPN2242_07450
( YP_005953973.1 )

prophage P2 OGR-like protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

9e-16

23) EAM_0545
( YP_003537637.1 )

prophage protein

NC_013971
(Erwinia amylovora ATCC 49946)

9e-16

24) ogrK
( YP_003532410.1 )

Late control gene B protein

NC_013961
(Erwinia amylovora CFBP1430)

9e-16

25) gpB
( YP_004731618.1 )

phage late control gene

NC_015761
(Salmonella bongori NCTC 12419)

1e-15

26) STMMW_31741
( YP_005234196.1 )

phage late control gene

NC_016854
(Salmonella enterica D23580)

1e-15

27) Ent638_1360
( YP_001176092.1 )

phage transcriptional activator, Ogr/delta

NC_009436
(Enterobacter sp. 638)

1e-15

28) Pat9b_3408
( YP_004117258.1 )

transcriptional activator Ogr/delta

NC_014837
(Pantoea sp. At-9b)

2e-15

29) ybl53
( YP_002998694.1 )

ybl53

NC_012892
(Escherichia coli BL21(DE3))

3e-15

30) ECD_00851
( YP_003053517.1 )

prophage P2 OGR-like protein

NC_012971
(Escherichia coli BL21(DE3))

3e-15

31) ogrK
( NP_752909.1 )

prophage P2 Ogr protein

NC_004431
(Escherichia coli CFT073)

3e-15

32) KO11_19285
( YP_006166176.1 )

prophage P2 OGR-like protein

NC_017660
(Escherichia coli KO11FL)

3e-15

33) ECB_00851
( YP_003044069.1 )

prophage P2 OGR-like protein

NC_012967
(Escherichia coli REL606)

3e-15

34) WFL_04645
( YP_006172379.1 )

prophage P2 OGR-like protein

NC_017664
(Escherichia coli W)

3e-15

35) TY21A_17430
( YP_007927698.1 )

prophage P2 OGR-like protein

NC_021176
(Salmonella enterica Ty21a)

3e-15

36) SBO_0780
( YP_407281.1 )

bacteriophage late gene regulator

NC_007613
(Shigella boydii Sb227)

3e-15

37) ogrK
( YP_005801378.1 )

Late control gene B protein (GpB)

NC_017390
(Erwinia pyrifoliae DSM 12163)

4e-15

38) pag
( YP_003740499.1 )

Late gene activator Pag (Pag), phage associated

NC_014306
(Erwinia billingiae Eb661)

4e-15

39) APECO78_08005
( YP_007380776.1 )

prophage P2 OGR-like protein

NC_020163
(Escherichia coli APEC O78)

5e-15

40) EcolC_2750
( YP_001725705.1 )

transcriptional activator Ogr/delta

NC_010468
(Escherichia coli ATCC 8739)

5e-15

41) CE10_1716
( YP_006143798.1 )

phage transcriptional activator, Ogr/Delta

NC_017646
(Escherichia coli CE10)

5e-15

42) E2348C_0843
( YP_002328408.1 )

transcriptional activator

NC_011601
(Escherichia coli E2348/69)

5e-15

43) ECBD_2748
( YP_003036955.1 )

transcriptional activator Ogr/delta

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

5e-15

44) EcHS_A0949
( YP_001457686.1 )

phage transcriptional activator, Ogr/Delta

NC_009800
(Escherichia coli HS)

5e-15

45) EKO11_2990
( YP_005278643.1 )

transcriptional activator Ogr/delta

NC_016902
(Escherichia coli KO11FL)

5e-15

46) UMNK88_939
( YP_006132728.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

5e-15

47) ogrK
( YP_006123700.1 )

transcriptional activator Ogr/delta

NC_017635
(Escherichia coli W)

5e-15

48) STY3703
( NP_457894.1 )

putative positive regulator of late gene transcription

NC_003198
(Salmonella enterica CT18)

5e-15

49) STBHUCCB_36280
( YP_005219101.1 )

Prophage P2 OGR-like protein

NC_016832
(Salmonella enterica P-stx-12)

5e-15

50) t3445
( NP_807107.1 )

positive regulator of late gene transcription

NC_004631
(Salmonella enterica Ty2)

5e-15

51) SbBS512_E2486
( YP_001880958.1 )

phage transcriptional activator, Ogr/Delta

NC_010658
(Shigella boydii CDC 3083-94)

5e-15

52) H650_11765
( YP_008108166.1 )

transcriptional regulator

NC_021500
(Enterobacter sp. R4-368)

5e-15

53) MU9_2844
( YP_007506262.1 )

hypothetical protein

NC_020418
(Morganella morganii KT)

8e-15

54) Ent638_3475
( YP_001178185.1 )

DNA-binding transcriptional regulator

NC_009436
(Enterobacter sp. 638)

9e-15

55) ECENHK_12570
( YP_006578997.1 )

DNA-binding transcriptional regulator

NC_018405
(Enterobacter cloacae ENHKU01)

1e-14

56) ogr
( YP_004729650.1 )

positive regulator of phage late gene transcription

NC_015761
(Salmonella bongori NCTC 12419)

1e-14

57) ogrK
( NP_927384.1 )

Ogr protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-14

58) EpC_05990
( YP_002647631.1 )

phage transcriptional activator, Ogr/delta

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-14

59) E2348C_2893
( YP_002330385.1 )

DNA-binding transcriptional regulator

NC_011601
(Escherichia coli E2348/69)

2e-14

60) LY180_20525
( YP_008567130.1 )

transcriptional regulator

NC_022364
(Escherichia coli LY180)

3e-14

61) SEEH1578_06555
( YP_008245384.1 )

DNA-binding transcriptional regulator

NC_021810
(Salmonella enterica 41578)

3e-14

62) ogr
( YP_852033.1 )

DNA-binding transcriptional regulator

NC_008563
(Escherichia coli APEC O1)

3e-14

63) ECH74115_3023
( YP_002271325.1 )

DNA-binding transcriptional regulator

NC_011353
(Escherichia coli EC4115)

3e-14

64) ogr-1
( YP_006162896.1 )

DNA-binding transcriptional regulator

NC_017660
(Escherichia coli KO11FL)

3e-14

65) ECNA114_4052
( YP_006141170.1 )

Putative prophage P2 ogr protein

NC_017644
(Escherichia coli NA114)

3e-14

66) ECSP_2839
( YP_003078704.1 )

DNA-binding transcriptional regulator

NC_013008
(Escherichia coli TW14359)

3e-14

67) ogr-2
( YP_006175588.1 )

DNA-binding transcriptional regulator

NC_017664
(Escherichia coli W)

3e-14

68) SSON53_23670
( YP_005459220.1 )

DNA-binding transcriptional regulator

NC_016822
(Shigella sonnei 53G)

3e-14

69) EcE24377A_0999
( YP_001462120.1 )

DNA-binding transcriptional regulator

NC_009801
(Escherichia coli E24377A)

4e-14

70) ogrK
( YP_002398356.1 )

DNA-binding transcriptional regulator

NC_011745
(Escherichia coli ED1a)

4e-14

71) ECOK1_0969
( YP_006100187.1 )

phage transcriptional activator, Ogr/Delta

NC_017628
(Escherichia coli IHE3034)

4e-14

72) EKO11_4401
( YP_005280021.1 )

transcriptional activator Ogr/delta

NC_016902
(Escherichia coli KO11FL)

4e-14

73) ogr-2
( YP_006164802.1 )

DNA-binding transcriptional regulator

NC_017660
(Escherichia coli KO11FL)

4e-14

74) ECOPMV1_04312
( YP_008574030.1 )

DNA-binding transcriptional regulator

NC_022370
(Escherichia coli PMV-1)

4e-14

75) ogrK
( YP_003045181.1 )

DNA-binding transcriptional regulator

NC_012967
(Escherichia coli REL606)

4e-14

76) ogrK
( YP_002391879.1 )

DNA-binding transcriptional regulator

NC_011742
(Escherichia coli S88)

4e-14

77) EcSMS35_4352
( YP_001746297.1 )

DNA-binding transcriptional regulator

NC_010498
(Escherichia coli SMS-3-5)

4e-14

78) ogrK2
( YP_006124928.1 )

DNA-binding transcriptional regulator prophage P2 remnant

NC_017635
(Escherichia coli W)

4e-14

79) ogrK1
( YP_006126813.1 )

DNA-binding transcriptional regulator prophage P2 remnant

NC_017635
(Escherichia coli W)

4e-14

80) ogr-1
( YP_006173643.1 )

DNA-binding transcriptional regulator

NC_017664
(Escherichia coli W)

4e-14

81) SE451236_19825
( YP_008266957.1 )

transcriptional regulator

NC_021820
(Salmonella enterica 08-1736)

4e-14

82) CFSAN001992_20080
( YP_007473728.1 )

Late control protein GpB

NC_020307
(Salmonella enterica CFSAN001992)

4e-14

83) gpB
( YP_005182541.1 )

bacteriophage late control gene

NC_016810
(Salmonella enterica SL1344)

4e-14

84) EKO11_1709
( YP_005277393.1 )

transcriptional activator Ogr/delta

NC_016902
(Escherichia coli KO11FL)

6e-14

85) LY180_10715
( YP_008565237.1 )

transcriptional regulator

NC_022364
(Escherichia coli LY180)

6e-14

86) APECO78_08490
( YP_007380873.1 )

DNA-binding transcriptional regulator

NC_020163
(Escherichia coli APEC O78)

6e-14

87) ETAC_16385
( YP_007630758.1 )

DNA-binding transcriptional regulator

NC_020796
(Edwardsiella tarda C07-087)

7e-14

88) EcDH1_1574
( YP_006091528.1 )

transcriptional activator Ogr/delta

NC_017625
(Escherichia coli DH1)

7e-14

89) ogrK
( YP_006129420.1 )

DNA-binding transcriptional regulator prophage P2 remnant

NC_017638
(Escherichia coli DH1)

7e-14

90) ogrK
( YP_001731032.1 )

DNA-binding transcriptional regulator

NC_010473
(Escherichia coli K-12)

7e-14

91) ogrK
( YP_002927068.1 )

DNA-binding transcriptional regulator

NC_012759
(Escherichia coli K-12)

7e-14

92) ogrK
( YP_490324.1 )

DNA-binding transcriptional regulator

NC_007779
(Escherichia coli K-12)

7e-14

93) ogrK
( NP_416586.1 )

positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome)

NC_000913
(Escherichia coli K12)

7e-14

94) STY2881
( NP_457164.1 )

putative bacteriophage late gene regulator

NC_003198
(Salmonella enterica CT18)

9e-14

95) STBHUCCB_27970
( YP_005218307.1 )

Prophage P2 OGR-like protein

NC_016832
(Salmonella enterica P-stx-12)

9e-14

96) t2659
( NP_806370.1 )

bacteriophage late gene regulator

NC_004631
(Salmonella enterica Ty2)

9e-14

97) TY21A_13465
( YP_007926944.1 )

putative bacteriophage late gene regulator

NC_021176
(Salmonella enterica Ty21a)

9e-14

98) Y11_13511
( YP_006004850.1 )

prophage p2 ogr protein

NC_017564
(Yersinia enterocolitica Y11)

6e-13

99) ogrK
( YP_070264.1 )

DNA-binding transcriptional regulator

NC_006155
(Yersinia pseudotuberculosis IP 32953)

7e-13

100) SOD_c07270
( YP_008136936.1 )

late control gene B protein

NC_021591
(Serratia odorifera 4Rx13)

8e-13

101) M621_03925
( YP_008157626.1 )

transcriptional regulator

NC_021659
(Serratia plymuthica S13)

8e-13

102) M495_03640
( YP_008228701.1 )

transcriptional regulator

NC_021741
(Serratia liquefaciens ATCC 27592)

1e-12

103) PC1_3199
( YP_003018758.1 )

transcriptional activator Ogr/delta

NC_012917
(Pectobacterium carotovorum PC1)

1e-12

104) Spro_0856
( YP_001477090.1 )

transcriptional activator Ogr/delta

NC_009832
(Serratia proteamaculans 568)

2e-12

105) Entcl_1117
( YP_003940668.1 )

transcriptional activator Ogr/delta

NC_014618
(Enterobacter cloacae SCF1)

3e-12

106) ogrK
( YP_007404664.1 )

positive regulator of P2 growth

NC_020211
(Serratia marcescens WW4)

3e-12

107) SerAS9_0780
( YP_004504194.1 )

transcriptional activator Ogr/delta

NC_015567
(Serratia plymuthica AS9)

3e-12

108) SerAS12_0780
( YP_004499242.1 )

transcriptional activator Ogr/delta

NC_015566
(Serratia sp. AS12)

3e-12

109) SerAS13_0780
( YP_006023657.1 )

transcriptional activator Ogr/delta

NC_017573
(Serratia sp. AS13)

3e-12

110) YPK_2353
( YP_001721083.1 )

transcriptional activator Ogr/delta

NC_010465
(Yersinia pseudotuberculosis YPIII)

9e-12

111) YpsIP31758_2194
( YP_001401164.1 )

phage transcriptional activator, Ogr/Delta

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-11

112) YPTS_1870
( YP_001872294.1 )

transcriptional activator Ogr/delta

NC_010634
(Yersinia pseudotuberculosis PB1/+)

1e-11

113) YPK_2306
( YP_001721036.1 )

transcriptional activator Ogr/delta

NC_010465
(Yersinia pseudotuberculosis YPIII)

1e-11

114) Rahaq_0606
( YP_004211360.1 )

transcriptional activator Ogr/delta

NC_015061
(Rahnella sp. Y9602)

1e-11

115) Rahaq_1503
( YP_004212252.1 )

transcriptional activator Ogr/delta

NC_015061
(Rahnella sp. Y9602)

1e-11

116) Rahaq2_4696
( YP_005220430.1 )

Ogr/Delta-like zinc finger

NC_016835
(Rahnella aquatilis CIP 78.65)

2e-11

117) Q7S_18705
( YP_005403517.1 )

transcriptional activator Ogr/delta

NC_017047
(Rahnella aquatilis HX2)

2e-11

118) H650_08915
( YP_008107609.1 )

transcriptional regulator

NC_021500
(Enterobacter sp. R4-368)

2e-11

119) D781_0817
( YP_007343343.1 )

Ogr/Delta-like zinc finger

NC_020064
(Serratia marcescens FGI94)

4e-11

120) YE105_C1774
( YP_004297973.1 )

Phage transcriptional activator, Ogr/Delta

NC_015224
(Yersinia enterocolitica 105.5R(r))

4e-11

121) Rahaq2_1557
( YP_005199575.1 )

Ogr/Delta-like zinc finger

NC_016818
(Rahnella aquatilis CIP 78.65)

3e-10

122) Q7S_07255
( YP_005401262.1 )

DNA-binding transcriptional regulator

NC_017047
(Rahnella aquatilis HX2)

3e-10

123) Rahaq2_0738
( YP_005198797.1 )

Ogr/Delta-like zinc finger

NC_016818
(Rahnella aquatilis CIP 78.65)

3e-10

124) A3UG_19530
( YP_006479318.1 )

DNA-binding transcriptional regulator

NC_018079
(Enterobacter cloacae SDM)

3e-10

125) Q7S_03270
( YP_005400482.1 )

transcriptional activator Ogr/delta

NC_017047
(Rahnella aquatilis HX2)

4e-10

126) Rahaq_0707
( YP_004211461.1 )

transcriptional activator Ogr/delta

NC_015061
(Rahnella sp. Y9602)

4e-10

127) Ser39006_2484
( YP_008522866.1 )

transcriptional activator Ogr/delta

NC_022268
(Serratia sp. ATCC 39006)

7e-10

128) B
( YP_005935515.1 )

late control protein B

NC_017531
(Pantoea ananatis AJ13355)

9e-10

129) B
( YP_003521690.1 )

NC_013956
(Pantoea ananatis LMG 20103)

9e-10

130) ogr
( YP_005194092.1 )

transcriptional activator Ogr/delta

NC_016816
(Pantoea ananatis LMG 5342)

1e-09

131) PAGR_g0637
( YP_005991393.1 )

late control protein ogr/delta

NC_017554
(Pantoea ananatis PA13)

1e-09

132) Dd703_2106
( YP_002987715.1 )

transcriptional activator Ogr/delta

NC_012880
(Dickeya dadantii Ech703)

1e-09

133) Dd586_1772
( YP_003333340.1 )

transcriptional activator Ogr/delta

NC_013592
(Dickeya dadantii Ech586)

1e-09

134) Dd1591_1808
( YP_003004138.1 )

transcriptional activator Ogr/delta

NC_012912
(Dickeya zeae Ech1591)

1e-09

135) ogrK
( YP_070360.1 )

prophage p2 Ogr protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

5e-09

136) rlsB
( YP_003540524.1 )

levansucrase regulator

NC_013971
(Erwinia amylovora ATCC 49946)

2e-08

137) SG1859
( YP_455539.1 )

phage late gene regulator

NC_007712
(Sodalis glossinidius morsitans)

4e-08

138) Rahaq2_5036
( YP_005202475.1 )

Ogr/Delta-like zinc finger

NC_016819
(Rahnella aquatilis CIP 78.65)

4e-08

139) F504_3527
( YP_008237259.1 )

Phage transcriptional activator, Ogr/Delta

NC_021745
(Ralstonia solanacearum FQY_4)

8e-08

140) EbC_01280
( YP_003739519.1 )

phage transcriptional activator, Ogr/delta

NC_014306
(Erwinia billingiae Eb661)

1e-07

141) RSc0964
( NP_519085.1 )

bacteriophage transcriptional activator-related transcription regulator protein

NC_003295
(Ralstonia solanacearum GMI1000)

2e-07

142) EcolC_0050
( YP_001723063.1 )

transcriptional activator Ogr/delta

NC_010468
(Escherichia coli ATCC 8739)

4e-07

143) EC042_3995A
( YP_006098280.1 )

putative prophage regulatory protein

NC_017626
(Escherichia coli 042)

5e-07

144) rlsB
( YP_001909371.1 )

Levansucrase regulator

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-06

145) rlsB
( YP_002650666.1 )

Levansucrase regulator

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-06

146) EBL_c09390
( YP_006318565.1 )

phage transcriptional activator-like protein

NC_017910
(Escherichia blattae DSM 4481)

3e-06

147) SARI_03882
( YP_001572818.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

3e-06

148) SNSL254_A2956
( YP_002042002.1 )

phage transcriptional activator, Ogr/delta

NC_011080
(Salmonella enterica SL254)

3e-06

149) SN31241_38490
( YP_008361764.1 )

Phage transcriptional activator, Ogr/delta

NC_021902
(Salmonella enterica USMARC-S3124.1)

3e-06

150) SBOV27751
( YP_008506603.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

4e-06

151) SSPA3989
( YP_002144823.1 )

hypothetical protein

NC_011147
(Salmonella enterica AKU12601)

4e-06

152) SPA4293
( YP_153338.1 )

hypothetical protein

NC_006511
(Salmonella enterica ATCC 9150)

4e-06

153) CFSAN001992_19720
( YP_007473656.1 )

hypothetical protein

NC_020307
(Salmonella enterica CFSAN001992)

4e-06

154) SPAB_03417
( YP_001589598.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

4e-06

155) SL1344_2717
( YP_005182612.1 )

bacteriophage gene regulatory protein

NC_016810
(Salmonella enterica SL1344)

4e-06

156) Q7S_14510
( YP_005402684.1 )

transcriptional activator Ogr/delta

NC_017047
(Rahnella aquatilis HX2)

9e-06

157) EpC_22070
( YP_002649210.1 )

Bacteriophage regulatory protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

4e-05

• Sequence Alignments

1) SSPA2378 in NC_011147


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  120 bits (438),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60
           MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTVSGQGHMNF  72
           HPTVSGQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

2) SPA2555 in NC_006511


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  120 bits (438),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60
           MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTVSGQGHMNF  72
           HPTVSGQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

3) STY4600 in NC_003198


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  120 bits (438),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60
           MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTVSGQGHMNF  72
           HPTVSGQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

4) TY21A_21870 in NC_021176


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  120 bits (438),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60
           MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTVSGQGHMNF  72
           HPTVSGQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

5) t4294 in NC_004631


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  120 bits (438),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60
           MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTVSGQGHMNF  72
           HPTVSGQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

6) I137_12945 in NC_021984


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  113 bits (410),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 63/72 (88%), Positives = 68/72 (95%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHAAHTRSSFQVTESTKERYCQCQNINCGSTFVTHETVVRFIVTPAVIATAPP  60
           MMNCPKCGH+AHTRSSFQVT+STKERYCQCQNINCGSTFVTHETVVRFIVTPA++  APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPGGQGHMNF  72
           HP  +GQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

7) rlsB in NC_010694


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  110 bits (401),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 56/72 (78%), Positives = 69/72 (96%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHAAHTRSSFRVSDHTKERYCQCQNINCGATFVTHETVVRYIATPNLIDHAPP  60
           MMNCPKCGH+AHTRSSF+V+D TKERYCQCQNINCG+TFVTHETVVR+I TP L+++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HSSMGGQGHMSF  72
           H++++GQGHM+F
Sbjct  61  HPTVSGQGHMNF  72

8) CSSP291_01815 in NC_020260


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score =  109 bits (398),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 60/72 (84%), Positives = 68/72 (95%), Gaps = 0/72 (0%)

Query  1   MMNCPKCGHAAHTRSSFRVSDNTKERYCQCQNINCGTTFVTHETVVRFIVTPGQVDHVPP  60
           MMNCPKCGH+AHTRSSF+V+D+TKERYCQCQNINCG+TFVTHETVVRFIVTP+ V++ PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLNSGQGHMNF  72
           HP  SGQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

9) STM2694 in NC_003197


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 97.5 bits (351),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 53/72 (74%), Positives = 62/72 (87%), Gaps = 0/72 (0%)

Query  1   MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP  60
           MMNCP CGH+AHTRSSFQV+ +TKERY QCQNINCG TFVTHET VR I+ P L+++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPGKGGQGHMSF  72
           HP  +GQGHM+F
Sbjct  61  HPTVSGQGHMNF  72

10) SL1344_2665 in NC_016810


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 97.5 bits (351),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 53/72 (74%), Positives = 62/72 (87%), Gaps = 0/72 (0%)

Query  1   MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP  60
           MMNCP CGH+AHTRSSFQV+ +TKERY QCQNINCG TFVTHET VR I+ P L+++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPGKGGQGHMSF  72
           HP  +GQGHM+F
Sbjct  61  HPTVSGQGHMNF  72

11) STM474_2817 in NC_016857


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 97.5 bits (351),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 53/72 (74%), Positives = 62/72 (87%), Gaps = 0/72 (0%)

Query  1   MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP  60
           MMNCP CGH+AHTRSSFQV+ +TKERY QCQNINCG TFVTHET VR I+ P L+++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPGKGGQGHMSF  72
           HP  +GQGHM+F
Sbjct  61  HPTVSGQGHMNF  72

12) STMDT12_C27460 in NC_016860


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 97.5 bits (351),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 53/72 (74%), Positives = 62/72 (87%), Gaps = 0/72 (0%)

Query  1   MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP  60
           MMNCP CGH+AHTRSSFQV+ +TKERY QCQNINCG TFVTHET VR I+ P L+++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPGKGGQGHMSF  72
           HP  +GQGHM+F
Sbjct  61  HPTVSGQGHMNF  72

13) STU288_13625 in NC_021151


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 97.5 bits (351),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 53/72 (74%), Positives = 62/72 (87%), Gaps = 0/72 (0%)

Query  1   MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP  60
           MMNCP CGH+AHTRSSFQV+ +TKERY QCQNINCG TFVTHET VR I+ P L+++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPGKGGQGHMSF  72
           HP  +GQGHM+F
Sbjct  61  HPTVSGQGHMNF  72

14) ECENHK_16920 in NC_018405


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 96.8 bits (348),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 53/72 (74%), Positives = 61/72 (85%), Gaps = 0/72 (0%)

Query  1   MMNCPECGQAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPP  60
           MMNCP CG++AHTRSSFQV+ +TKERY QCQNINCG TFVTHET VR I+ P L+++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPGKDGQGHMNF  72
           HP   GQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

15) CFSAN001992_19975 in NC_020307


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 59/72 (82%), Positives = 65/72 (91%), Gaps = 0/72 (0%)

Query  12  MMICPKCGHAAHTRSSFQVTDTTKERYCQCQNINCGSTFVTHETVVRYIVTPVQINSVqp  71
           MM CPKCGH+AHTRSSFQVTD+TKERYCQCQNINCGSTFVTHETVVR+IVTP  +N+  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  hpgpggqghMNF  83
           HP  +GQGHMNF
Sbjct  61  HPTVSGQGHMNF  72

16) ogrK in NC_013892


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 80.0 bits (284),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 43/67 (65%), Positives = 53/67 (80%), Gaps = 0/67 (0%)

Query  1   MIKCPLCGQSAHTRSSFEHSSQTKERYNQCQNINCGATFVSHETFVRFIAKPGDVENVTP  60
           M++CP CG+SAHTRSSF+ +  TKERY QCQNINCG+TFV+HET VRFI  P+ V+N  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPRVKTK  67
           HP V  +
Sbjct  61  HPTVSGQ  67

17) ogrK in NC_012962


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 40/72 (56%), Positives = 56/72 (78%), Gaps = 0/72 (0%)

Query  1   MIKCPLCGQAAHARSSFEHSSQTKERYNQCQNINCGATFVSHETFVRFISKPGEVVSVKP  60
           M++CP CG++AH+RSSF+ +  TKERY QCQNINCG+TFV+HET VRFI  P+ V +  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPKEKSKTQLNL  72
           HP   ++ ++N+
Sbjct  61  HPTVSGQGHMNF  72

18) PAGR_g0686 in NC_017554


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 78.4 bits (278),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 43/67 (65%), Positives = 55/67 (83%), Gaps = 0/67 (0%)

Query  1   MMNCPMCGNAAHTRSSFQVSKNTKERYNQCQNINCSCTFKSHETVTDIIMTPGKVASVPP  60
           MMNCP CG++AHTRSSFQV+ +TKERY QCQNINC+ TF +HETV  +I+TP+ V + PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPDRGSQ  67
           HP  ++Q
Sbjct  61  HPTVSGQ  67

19) PMI1970 in NC_010554


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 77.3 bits (274),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 41/61 (68%), Positives = 48/61 (79%), Gaps = 0/61 (0%)

Query  1   MMICPVCGHAAHTRSSQQISSDTKERYNQCQNINCGATFVSHETVTRFISKPQLIERVEP  60
           MM CP CGH+AHTRSS Q++  TKERY QCQNINCG+TFV+HETV RFI  P L++   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  H  61
           H
Sbjct  61  H  61

20) ogrK in NC_017445


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.8 bits (272),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 43/71 (61%), Positives = 55/71 (78%), Gaps = 0/71 (0%)

Query  1   MMNCPLCGRSAHTRSSFQVSTETKERYNQCTNIECGHTFVTHESFVRTVSRPAKISSAPP  60
           MMNCP CG+SAHTRSSFQV+  TKERY QC NI+CG TFVTHE+ VR +  PA +++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HNKVVQEKRVS  71
           H  V  + +++
Sbjct  61  HPTVSGQGHMN  71

21) KOX_15635 in NC_016612


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.8 bits (272),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 53/72 (74%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSMTKERYNQCQNINCSHTFVTHETFVRSISTPKEAHPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   +   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTNSGQAALAL  72
           HPT SGQ+ + +
Sbjct  61  HPTVSGQGHMNF  72

22) KPN2242_07450 in NC_017540


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.8 bits (272),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 53/72 (74%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSMTKERYNQCQNINCSHTFVTHETFVRSISTPKEAHPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   +   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTNSGQAALAL  72
           HPT SGQ+ + +
Sbjct  61  HPTVSGQGHMNF  72

23) EAM_0545 in NC_013971


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.8 bits (272),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 44/71 (62%), Positives = 55/71 (78%), Gaps = 0/71 (0%)

Query  1   MMNCPLCGRSAHTRSSFQVSAETKERYNQCTNIECGHTFVTHETFVRTVSRPAKISSAPP  60
           MMNCP CG+SAHTRSSFQV+  TKERY QC NI+CG TFVTHET VR +  PA +++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HKTGVPEKRLS  71
           H T   + +++
Sbjct  61  HPTVSGQGHMN  71

24) ogrK in NC_013961


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.8 bits (272),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 44/71 (62%), Positives = 55/71 (78%), Gaps = 0/71 (0%)

Query  1   MMNCPLCGRSAHTRSSFQVSAETKERYNQCTNIECGHTFVTHETFVRTVSRPAKISSAPP  60
           MMNCP CG+SAHTRSSFQV+  TKERY QC NI+CG TFVTHET VR +  PA +++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HKTGVPEKRLS  71
           H T   + +++
Sbjct  61  HPTVSGQGHMN  71

25) gpB in NC_015761


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.5 bits (271),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 43/72 (60%), Positives = 59/72 (82%), Gaps = 0/72 (0%)

Query  1   MFHCPKCHHAAHARTSRYLTENTKERYHQCQNINCSCTFMTMETIERFIVTPGSIDPAPP  60
           M +CPKC H+AH+R+S  +T++TKERY QCQNINC+ TF+T ET+ RFIVTP+ ++ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTVGGQRPLWL  72
           HPTV+GQ  + +
Sbjct  61  HPTVSGQGHMNF  72

26) STMMW_31741 in NC_016854


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.5 bits (271),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 43/72 (60%), Positives = 59/72 (82%), Gaps = 0/72 (0%)

Query  1   MFHCPKCHHAAHARTSRYLTENTKERYHQCQNINCSCTFMTMETIERFIVTPGSIDPAPP  60
           M +CPKC H+AH+R+S  +T++TKERY QCQNINC+ TF+T ET+ RFIVTP+ ++ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTVGGQRPLWL  72
           HPTV+GQ  + +
Sbjct  61  HPTVSGQGHMNF  72

27) Ent638_1360 in NC_009436


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 76.3 bits (270),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 43/72 (60%), Positives = 54/72 (75%), Gaps = 1/72 (1%)

Query  1   MMNCPMCGQAAHTRSSFQVSSETKERYNQCTNIECGHTFVTHETFVRSVCRPQKISAAPP  60
           MMNCP CG++AHTRSSFQV+  TKERY QC NI+CG TFVTHET VR +  P  ++ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPK-GMQEQLAY  71
           HP  + Q ++ +
Sbjct  61  HPTVSGQGHMNF  72

28) Pat9b_3408 in NC_014837


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.7 bits (268),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 42/72 (59%), Positives = 55/72 (77%), Gaps = 0/72 (0%)

Query  1   MMNCPLCGNAAHTRSSFQVSATTKERYNQCQNINCSCTFKSHETVSEIIMKPGSVKPVPP  60
           MMNCP CG++AHTRSSFQV+ +TKERY QCQNINC+ TF +HETV  +I+ P+ V+  PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPGRNQQQPLWL  72
           HP  + Q  + +
Sbjct  61  HPTVSGQGHMNF  72

29) ECD_00851 in NC_012971


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

30) ybl53 in NC_012892


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

31) ECB_00851 in NC_012967


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

32) ogrK in NC_004431


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

33) KO11_19285 in NC_017660


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

34) WFL_04645 in NC_017664


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

35) TY21A_17430 in NC_021176


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

36) SBO_0780 in NC_007613


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  12  MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  71
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  72  HPMKSGQVALSL  83
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

37) ogrK in NC_017390


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 75.0 bits (265),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 42/61 (69%), Positives = 50/61 (82%), Gaps = 0/61 (0%)

Query  1   MMNCPLCGRSAHTRSSFQVSTETKERYNQCTNIECGHTFVTHESFVRTVSRPAKISSAPP  60
           MMNCP CG+SAHTRSSFQV+  TKERY QC NI+CG TFVTHE+ VR +  PA +++APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  H  61
           H
Sbjct  61  H  61

38) pag in NC_014306


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 43/72 (60%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  1   MMNCPLCGGAAHTRSSFQVSKDTKERYNQCQNINCSCTFKSLETVAKIIMQPGTVKPVPP  60
           MMNCP CG +AHTRSSFQV+  TKERY QCQNINC+ TF + ETV ++I+ P+ V+  PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPDRSLQGALWL  72
           HP  S QG + +
Sbjct  61  HPTVSGQGHMNF  72

39) APECO78_08005 in NC_020163


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

40) EcolC_2750 in NC_010468


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

41) ECBD_2748 in NC_012947


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

42) EcHS_A0949 in NC_009800


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

43) EKO11_2990 in NC_016902


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

44) E2348C_0843 in NC_011601


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

45) CE10_1716 in NC_017646


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

46) UMNK88_939 in NC_017641


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

47) ogrK in NC_017635


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

48) STY3703 in NC_003198


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

49) STBHUCCB_36280 in NC_016832


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

50) t3445 in NC_004631


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

51) SbBS512_E2486 in NC_010658


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 46/72 (64%), Positives = 52/72 (73%), Gaps = 0/72 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQVALSL  72
           HP  SGQ  +++
Sbjct  61  HPTVSGQGHMNF  72

52) H650_11765 in NC_021500


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 74.4 bits (263),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 38/72 (53%), Positives = 57/72 (80%), Gaps = 0/72 (0%)

Query  1   MFHCPQCKHAAHARTSRYLSENTKERYHQCTNINCSCTFVTMESIERYIVTPGKIDPAPP  60
           M +CP+C H+AH+R+S  ++++TKERY QC NINC+ TFVT E++ R+IVTP+ ++ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPNQTGQRQLWF  72
           HP  +GQ ++ F
Sbjct  61  HPTVSGQGHMNF  72

53) MU9_2844 in NC_020418


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 73.9 bits (261),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 39/72 (55%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  1   MMKCPLCGELARTRSSRDVTTETKERYNQCTNINCGATFVSHETLARYITKPQLIGAVTL  60
           MM+CP CG+ A+TRSS +VT  TKERY QC NINCG+TFV+HET+ R+I  P L+     
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPANDKQLSMGL  72
           HP+   Q  M +
Sbjct  61  HPTVSGQGHMNF  72

54) Ent638_3475 in NC_009436


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 73.6 bits (260),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 41/70 (59%), Positives = 56/70 (80%), Gaps = 0/70 (0%)

Query  1   MFHCPKCQHAAHARTSRYLSENTKERYHQCTNINCSCTFVTMESVQRFIVTPSNINPAPP  60
           M +CPKC H+AH+R+S  ++++TKERY QC NINC+ TFVT E+V RFIVTP+ +N APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPTGQRQL  70
           HP  +GQ ++
Sbjct  61  HPTVSGQGHM  70

55) ECENHK_12570 in NC_018405


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 73.4 bits (259),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 43/72 (60%), Positives = 57/72 (80%), Gaps = 0/72 (0%)

Query  1   MFHCPKCHFAAHARTSRYFTDTTKERYHQCTNINCSATFVTTETVERFIVSPGVVVPAAP  60
           M +CPKC  +AH+R+S   TD+TKERY QC NINC++TFVT ETV RFIV+P++V  A+P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTSSGQQQIHW  72
           HPT SGQ +++ 
Sbjct  61  HPTVSGQGHMNF  72

56) ogr in NC_015761


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 72.9 bits (257),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 46/67 (69%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVRP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPMKSGQ  67
           HP  SGQ
Sbjct  61  HPTVSGQ  67

57) ogrK in NC_005126


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 72.9 bits (257),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 40/71 (57%), Positives = 53/71 (75%), Gaps = 0/71 (0%)

Query  1   MIKCPLCGKAAHARSSFEHSCHTKERYNQCQNINCGATFVSHETFVRFISKPGEVISVKP  60
           M++CP CG +AH+RSSF+ +  TKERY QCQNINCG+TFV+HET VRFI  P+ V +  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPKEKTKTQLN  71
           HP    + ++N
Sbjct  61  HPTVSGQGHMN  71

58) EpC_05990 in NC_012214


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 49/60 (82%), Gaps = 0/60 (0%)

Query  1   MNCPLCGRSAHTRSSFQVSTETKERYNQCTNIECGHTFVTHESFVRTVSRPAKISSAPPH  60
           MNCP CG+SAHTRSSFQV+  TKERY QC NI+CG TFVTHE+ VR +  PA +++APPH
Sbjct  2   MNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPPH  61

59) E2348C_2893 in NC_011601


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 72.3 bits (255),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 40/72 (56%), Positives = 55/72 (77%), Gaps = 0/72 (0%)

Query  1   MMHCPLCQDAAHARSSRYLSTETKERYHQCQNINCGCTFVTHESLARFIVKPGEIEPAPP  60
           MM+CP C ++AH+RSS  ++  TKERY QCQNINCG TFVTHE++ RFIV P+ ++ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPSKYQQHQLWL  72
           HP+   Q ++ +
Sbjct  61  HPTVSGQGHMNF  72

60) LY180_20525 in NC_022364


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 72.1 bits (254),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  22  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  81
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  82  HPLPSGQQIM  91
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

61) SEEH1578_06555 in NC_021810


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.8 bits (253),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

62) ogr in NC_008563


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.5 bits (252),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

63) ogr-1 in NC_017660


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.5 bits (252),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

64) ECNA114_4052 in NC_017644


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.5 bits (252),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

65) ECH74115_3023 in NC_011353


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.5 bits (252),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

66) ECSP_2839 in NC_013008


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.5 bits (252),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

67) ogr-2 in NC_017664


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.5 bits (252),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

68) SSON53_23670 in NC_016822


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.5 bits (252),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

69) ogrK in NC_012967


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

70) EcE24377A_0999 in NC_009801


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

71) ogrK in NC_011745


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

72) ECOK1_0969 in NC_017628


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

73) ogr-2 in NC_017660


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

74) EKO11_4401 in NC_016902


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

75) ECOPMV1_04312 in NC_022370


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

76) ogrK in NC_011742


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

77) EcSMS35_4352 in NC_010498


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

78) ogrK2 in NC_017635


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

79) ogrK1 in NC_017635


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

80) ogr-1 in NC_017664


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

81) SE451236_19825 in NC_021820


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/72 (55%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  1   MMHCPLCQNAAHARTSRYLSTETKERYHQCQNINCGCTFITFETLSRFIVKPGTVDPAPP  60
           MM+CP C ++AH+R+S  ++  TKERY QCQNINCG TF+T ET+ RFIV P+ V+ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPIRNQQQQLWL  72
           HP  + Q ++ +
Sbjct  61  HPTVSGQGHMNF  72

82) CFSAN001992_20080 in NC_020307


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/72 (55%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  1   MMHCPLCQNAAHARTSRYLSTETKERYHQCQNINCGCTFITFETLSRFIVKPGTVDPAPP  60
           MM+CP C ++AH+R+S  ++  TKERY QCQNINCG TF+T ET+ RFIV P+ V+ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPIRNQQQQLWL  72
           HP  + Q ++ +
Sbjct  61  HPTVSGQGHMNF  72

83) gpB in NC_016810


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.3 bits (251),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 39/72 (55%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  1   MMHCPLCQNAAHARTSRYLSTETKERYHQCQNINCGCTFITFETLSRFIVKPGAVDPAPP  60
           MM+CP C ++AH+R+S  ++  TKERY QCQNINCG TF+T ET+ RFIV P+ V+ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPVRNQQQQLWL  72
           HP  + Q ++ +
Sbjct  61  HPTVSGQGHMNF  72

84) EKO11_1709 in NC_016902


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.0 bits (250),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  28  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  87
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  88  HPLPSGQQIM  97
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

85) LY180_10715 in NC_022364


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 71.0 bits (250),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  28  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHAVRP  87
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  88  HPLPSGQQIM  97
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

86) APECO78_08490 in NC_020163


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.8 bits (249),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  13  MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRP  72
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  73  HPLPSGQQIM  82
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

87) ETAC_16385 in NC_020796


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 40/70 (58%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYMTDTTKERYHQCQNVNCSATFITFESVQRYIVKPGEVNAVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ VN   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQTM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

88) ogrK in NC_012759


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

89) EcDH1_1574 in NC_017625


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

90) ogrK in NC_017638


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

91) ogrK in NC_010473


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

92) ogrK in NC_000913


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

93) ogrK in NC_007779


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 53/70 (76%), Gaps = 0/70 (0%)

Query  1   MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRP  60
           M +CP C H+AH+R+S  +TD+TKERY QCQN+NC++TF+T E+V R+IV P+ V+   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPLPSGQQIM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

94) STY2881 in NC_003198


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.2 bits (247),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 43/62 (70%), Positives = 46/62 (75%), Gaps = 0/62 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HP  62
           HP
Sbjct  61  HP  62

95) STBHUCCB_27970 in NC_016832


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.2 bits (247),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 43/62 (70%), Positives = 46/62 (75%), Gaps = 0/62 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HP  62
           HP
Sbjct  61  HP  62

96) TY21A_13465 in NC_021176


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.2 bits (247),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 43/62 (70%), Positives = 46/62 (75%), Gaps = 0/62 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HP  62
           HP
Sbjct  61  HP  62

97) t2659 in NC_004631


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 70.2 bits (247),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 43/62 (70%), Positives = 46/62 (75%), Gaps = 0/62 (0%)

Query  1   MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP  60
           MM CP CG +AHTRSSFQV+  TKERY QCQNINC+ TFVTHET VR I TP   N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HP  62
           HP
Sbjct  61  HP  62

98) Y11_13511 in NC_017564


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 67.3 bits (236),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 37/63 (59%), Positives = 48/63 (77%), Gaps = 0/63 (0%)

Query  1   MMHCPRCKFAAHARSSRYLSDETKERYHQCTNINCGKTFKTHETIVETIMEPGIINAVPP  60
           MM+CP+C  +AH+RSS  ++D TKERY QC NINCG TF THET+V  I+ P+++N  PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPK  63
           HP 
Sbjct  61  HPT  63

99) ogrK in NC_006155


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 67.3 bits (236),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 37/63 (59%), Positives = 48/63 (77%), Gaps = 0/63 (0%)

Query  1   MMHCPRCKFAAHARSSRYLSDETKERYHQCTNINCGKTFKTHETIVDTIMEPGIINAVPP  60
           MM+CP+C  +AH+RSS  ++D TKERY QC NINCG TF THET+V  I+ P+++N  PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPK  63
           HP 
Sbjct  61  HPT  63

100) SOD_c07270 in NC_021591


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 67.1 bits (235),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 40/67 (60%), Positives = 50/67 (75%), Gaps = 0/67 (0%)

Query  1   MMHCPLCGNVAHTRSSRYLSESTKERYHQCQNINCSCTFATHESVARVIVKPGDIIPAQP  60
           MM+CP CG+ AHTRSS  +++STKERY QCQNINC+ TF THE+V R IV P+ +  A P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPEKGKQ  67
           HP  + Q
Sbjct  61  HPTVSGQ  67

101) M621_03925 in NC_021659


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 67.1 bits (235),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 40/67 (60%), Positives = 50/67 (75%), Gaps = 0/67 (0%)

Query  1   MMHCPLCGNVAHTRSSRYLSESTKERYHQCQNINCSCTFATHESVARVIVKPGDIIPAQP  60
           MM+CP CG+ AHTRSS  +++STKERY QCQNINC+ TF THE+V R IV P+ +  A P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPEKGKQ  67
           HP  + Q
Sbjct  61  HPTVSGQ  67

102) M495_03640 in NC_021741


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 66.3 bits (232),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 40/67 (60%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  1   MMHCPLCGSVAHTRSSRYLSEATKERYHQCQNINCSCTFATHESVARVIVKPGDIVPAQP  60
           MM+CP CG  AHTRSS  ++++TKERY QCQNINC+ TF THE+V R IV P+ +  A P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPEKSKQ  67
           HP  S Q
Sbjct  61  HPTVSGQ  67

103) PC1_3199 in NC_012917


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 66.3 bits (232),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 52/70 (75%), Gaps = 0/70 (0%)

Query  1   MMHCPLCQNAAHARSSRYITNKTKERYHQCQNINCGCTFKSMETIADIIMTPGDVKPVPP  60
           MM+CP C ++AH+RSS  +T+ TKERY QCQNINCG TF + ET+  +I+TP+ V+  PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPDRSNQGAL  70
           HP  S QG +
Sbjct  61  HPTVSGQGHM  70

104) Spro_0856 in NC_009832


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 66.0 bits (231),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 40/67 (60%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  1   MMHCPLCGSVAHTRSSRYLSEATKERYHQCQNINCSCTFATHESVARVIVKPGDIVPAQP  60
           MM+CP CG  AHTRSS  ++++TKERY QCQNINC+ TF THE+V R IV P+ +  A P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPEKSKQ  67
           HP  S Q
Sbjct  61  HPTVSGQ  67

105) Entcl_1117 in NC_014618


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 65.5 bits (229),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 34/62 (55%), Positives = 47/62 (76%), Gaps = 0/62 (0%)

Query  2   MMHCPVCQQTAHARSSRYLSSETKERYHQCRNIECGCTFVTHETLARYIVKPALAVHETR  61
           MM+CP C ++AH+RSS  ++  TKERY QC+NI+CG TFVTHET+ R+IV PAL  +   
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  62  QA  63
           ++
Sbjct  61  HP  62

106) ogrK in NC_020211


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 65.2 bits (228),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 50/70 (72%), Gaps = 1/70 (1%)

Query  1   MMHCPLCGHVAHTRSSRYLSESTKERYHQCRNINCSCTFATHESVARVIVKPVDDIIPAQ  60
           MM+CP CGH AHTRSS  +++STKERY QC+NINC+ TF THE+V R IV P   +  A 
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTP-ALVNNAP  59

Query  61  PHPPESQQKH  70
           PHP  S Q H
Sbjct  60  PHPTVSGQGH  69

107) SerAS12_0780 in NC_015566


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 65.2 bits (228),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 39/67 (59%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  1   MMHCPLCGNVAHTRSSRYLSESTKERYHQCQNINCSCTFATHESVARVIVKPGDIIPAQP  60
           MM+CP CG+ AHTRSS  +++STKERY QCQNINC+ TF THE+V R IV P+ +  A P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HTEKGKQ  67
           H   + Q
Sbjct  61  HPTVSGQ  67

108) SerAS13_0780 in NC_017573


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 65.2 bits (228),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 39/67 (59%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  1   MMHCPLCGNVAHTRSSRYLSESTKERYHQCQNINCSCTFATHESVARVIVKPGDIIPAQP  60
           MM+CP CG+ AHTRSS  +++STKERY QCQNINC+ TF THE+V R IV P+ +  A P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HTEKGKQ  67
           H   + Q
Sbjct  61  HPTVSGQ  67

109) SerAS9_0780 in NC_015567


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 65.2 bits (228),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 39/67 (59%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  1   MMHCPLCGNVAHTRSSRYLSESTKERYHQCQNINCSCTFATHESVARVIVKPGDIIPAQP  60
           MM+CP CG+ AHTRSS  +++STKERY QCQNINC+ TF THE+V R IV P+ +  A P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HTEKGKQ  67
           H   + Q
Sbjct  61  HPTVSGQ  67

110) YPK_2353 in NC_010465


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 63.7 bits (222),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 41/70 (59%), Positives = 48/70 (69%), Gaps = 0/70 (0%)

Query  1   MFNCPLCHQAAHTRSSSQVTTETKERYHQCTNVNCGHTFVTMESFMRSISKPGEINPVMP  60
           M NCP C ++AHTRSS QVT  TKERY QC N+NCG TFVT E+ +R I  P+ +N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPQTSGQVVM  70
           HP  SGQ  M
Sbjct  61  HPTVSGQGHM  70

111) YpsIP31758_2194 in NC_009708


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 63.4 bits (221),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 40/70 (58%), Positives = 48/70 (69%), Gaps = 0/70 (0%)

Query  1   MFNCPLCHQAAHTRSSSQVTTETKERYHQCTNVNCGHTFVTMESFMRSISKPGEINPVMP  60
           M NCP C ++AHTRSS QVT  TKERY QC N+NCG TFVT E+ +R I  P+ +N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPQTGGQVVM  70
           HP  +GQ  M
Sbjct  61  HPTVSGQGHM  70

112) YPTS_1870 in NC_010634


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 63.4 bits (221),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 40/70 (58%), Positives = 48/70 (69%), Gaps = 0/70 (0%)

Query  1   MFNCPLCHQAAHTRSSSQVTTETKERYHQCTNVNCGHTFVTMESFMRSISKPGEINPVMP  60
           M NCP C ++AHTRSS QVT  TKERY QC N+NCG TFVT E+ +R I  P+ +N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPQTGGQVVM  70
           HP  +GQ  M
Sbjct  61  HPTVSGQGHM  70

113) YPK_2306 in NC_010465


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 63.4 bits (221),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 40/70 (58%), Positives = 48/70 (69%), Gaps = 0/70 (0%)

Query  1   MFNCPLCHQAAHTRSSSQVTTETKERYHQCTNVNCGHTFVTMESFMRSISKPGEINPVMP  60
           M NCP C ++AHTRSS QVT  TKERY QC N+NCG TFVT E+ +R I  P+ +N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPQTGGQVVM  70
           HP  +GQ  M
Sbjct  61  HPTVSGQGHM  70

114) Rahaq_0606 in NC_015061


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 63.4 bits (221),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  1   MMHCPKCQHAAHARSSRYLSINTKERYHQCQNINCSCTFKTHESIADIIVEPGTVHAVQL  60
           MM+CPKC H+AH+RSS  ++ +TKERY QCQNINC+ TF THE++  +IV P+ V+    
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPDKHQQQSLQM  72
           HP    Q  ++ 
Sbjct  61  HPTVSGQGHMNF  72

115) Rahaq_1503 in NC_015061


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 63.4 bits (221),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  5   MMHCPKCQHAAHARSSRYLSINTKERYHQCQNINCSCTFKTHESIADIIVEPGTVHAVQL  64
           MM+CPKC H+AH+RSS  ++ +TKERY QCQNINC+ TF THE++  +IV P+ V+    
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  65  HPDKHQQQSLQM  76
           HP    Q  ++ 
Sbjct  61  HPTVSGQGHMNF  72

116) Rahaq2_4696 in NC_016835


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 62.9 bits (219),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  1   MMHCPKCQHAAHARSSRYLSLNTKERYHQCQNINCSCTFKTHESIADIIVEPGTVHAVQL  60
           MM+CPKC H+AH+RSS  ++ +TKERY QCQNINC+ TF THE++  +IV P+ V+    
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPDKHQQQSLQM  72
           HP    Q  ++ 
Sbjct  61  HPTVSGQGHMNF  72

117) Q7S_18705 in NC_017047


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 62.6 bits (218),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 35/63 (56%), Positives = 47/63 (75%), Gaps = 0/63 (0%)

Query  5   MMHCPKCQHAAHARSSRYLSINTKERYHQCQNINCSCTFKTHESIADIIVEPGTVHAVQL  64
           MM+CPKC H+AH+RSS  ++ +TKERY QCQNINC+ TF THE++  +IV P+ V+    
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  65  HPD  67
           HP 
Sbjct  61  HPT  63

118) H650_08915 in NC_021500


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 62.6 bits (218),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 32/60 (54%), Positives = 48/60 (80%), Gaps = 0/60 (0%)

Query  1   MMHCPVCQQAAHARSSRYLSSETKERYHQCQNIHCGCTFVTHESLARYIVRPPALQVSAS  60
           MM+CP C ++AH+RSS  ++  TKERY QCQNI+CG TFVTHE++ R+IV P+ ++ +++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

119) D781_0817 in NC_020064


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 61.3 bits (213),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MMHCPVCGNVAHTRSSRYLSESTKERYHQCQNINCSCTFATHESVARVIVKRGDTPQAPA  60
           MM+CP CG+ AHTRSS  +++STKERY QCQNINC+ TF THE+V R IV  +   +AP+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

120) YE105_C1774 in NC_015224


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 61.3 bits (213),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 39/70 (56%), Positives = 47/70 (68%), Gaps = 0/70 (0%)

Query  1   MFNCPLCHSAAHTRSSSQITTETKERYHQCINVNCGHTFVTMESFMRSISKPGEINPVMP  60
           M NCP C  +AHTRSS Q+T  TKERY QC N+NCG TFVT E+ +R I  P+ +N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPQTGGQVVM  70
           HP  +GQ  M
Sbjct  61  HPTVSGQGHM  70

121) Rahaq2_1557 in NC_016818


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 58.7 bits (203),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 37/67 (56%), Positives = 47/67 (71%), Gaps = 0/67 (0%)

Query  1   MFHCPICKHAAHTRSSRYLSENTKERYNQCQNINCGHTFKTMESFDGSIMKPGHINAVLP  60
           M +CP C H+AHTRSS  ++++TKERY QCQNINCG TF T E+    I+ P+ +N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTSHGQ  67
           HPT  GQ
Sbjct  61  HPTVSGQ  67

122) Q7S_07255 in NC_017047


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 58.7 bits (203),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 37/67 (56%), Positives = 47/67 (71%), Gaps = 0/67 (0%)

Query  1   MFHCPICKHAAHTRSSRYLSENTKERYNQCQNINCGHTFKTMESFDGSIMKPGHINAVLP  60
           M +CP C H+AHTRSS  ++++TKERY QCQNINCG TF T E+    I+ P+ +N   P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  HPTSHGQ  67
           HPT  GQ
Sbjct  61  HPTVSGQ  67

123) Rahaq2_0738 in NC_016818


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 33/53 (63%), Positives = 41/53 (78%), Gaps = 0/53 (0%)

Query  1   MMHCPLCGKVAHTRSSRYLSESTKERYHQCQNIECSCTFATHESVARVISKPG  53
           MM+CP CG  AHTRSS  +++STKERY QCQNI+C+ TF THE+V R I  P+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

124) A3UG_19530 in NC_018079


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 58.4 bits (202),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 47/60 (79%), Gaps = 0/60 (0%)

Query  1   MFHCPKCKHSAHARTSRYLSENTKERYHQCTNVDCSCTFVTMESVERLIAAPGMPERARA  60
           M +CPKC HSAH+R+S  ++++TKERY QC N++C+ TFVT E+V R+I +P++ + A +
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

125) Q7S_03270 in NC_017047


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 33/53 (63%), Positives = 41/53 (78%), Gaps = 0/53 (0%)

Query  1   MMHCPLCGKVAHTRSSRYLSESTKERYHQCQNIKCSCTFATHESVARVISKPG  53
           MM+CP CG  AHTRSS  +++STKERY QCQNI+C+ TF THE+V R I  P+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

126) Rahaq_0707 in NC_015061


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 58.4 bits (202),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 33/53 (63%), Positives = 41/53 (78%), Gaps = 0/53 (0%)

Query  1   MMHCPLCGKVAHTRSSRYLSESTKERYHQCQNIKCSCTFATHESVARVISKPG  53
           MM+CP CG  AHTRSS  +++STKERY QCQNI+C+ TF THE+V R I  P+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

127) Ser39006_2484 in NC_022268


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 57.4 bits (198),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 31/53 (59%), Positives = 42/53 (80%), Gaps = 0/53 (0%)

Query  1   MMHCPLCRHAAHARSSRYLSENTKERYHQCTNVNCGHTFVTMEAVTRSIMVPG  53
           MM+CP C H+AH+RSS  ++++TKERY QC N+NCG TFVT E+V R I+ P+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

128) B in NC_017531


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 57.1 bits (197),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 35/59 (60%), Positives = 43/59 (73%), Gaps = 0/59 (0%)

Query  8   MMHCPKCQTAAHTKSSRYVSKETKERYHQCQNINCSCTFKTLESVSGIIVEPAQINTVP  66
           MM+CPKC  +AHT+SS  V+  TKERY QCQNINC+ TF T E+V  +IV PA +N  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAP  59

129) B in NC_013956


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 57.1 bits (197),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 35/59 (60%), Positives = 43/59 (73%), Gaps = 0/59 (0%)

Query  8   MMHCPKCQTAAHTKSSRYVSKETKERYHQCQNINCSCTFKTLESVSGIIVEPAQINTVP  66
           MM+CPKC  +AHT+SS  V+  TKERY QCQNINC+ TF T E+V  +IV PA +N  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAP  59

130) PAGR_g0637 in NC_017554


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 35/59 (60%), Positives = 43/59 (73%), Gaps = 0/59 (0%)

Query  1   MMHCPKCQTAAHTKSSRYVSKETKERYHQCQNINCSCTFKTLESVSGIIVEPAQINTVP  59
           MM+CPKC  +AHT+SS  V+  TKERY QCQNINC+ TF T E+V  +IV PA +N  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAP  59

131) ogr in NC_016816


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 35/59 (60%), Positives = 43/59 (73%), Gaps = 0/59 (0%)

Query  1   MMHCPKCQTAAHTKSSRYVSKETKERYHQCQNINCSCTFKTLESVSGIIVEPAQINTVP  59
           MM+CPKC  +AHT+SS  V+  TKERY QCQNINC+ TF T E+V  +IV PA +N  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAP  59

132) Dd703_2106 in NC_012880


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 31/53 (59%), Positives = 42/53 (80%), Gaps = 0/53 (0%)

Query  1   MMHCPLCRHAAHARSSRYLSENTKERYHQCTNVNCGHTFVTLEAVTRSIMRPG  53
           MM+CP C H+AH+RSS  ++++TKERY QC N+NCG TFVT E+V R I+ P+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

133) Dd586_1772 in NC_013592


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 31/53 (59%), Positives = 42/53 (80%), Gaps = 0/53 (0%)

Query  1   MMHCPLCRHSAHARSSRYLSENTKERYHQCTNVNCGHTFVTMEAITRSIMVPG  53
           MM+CP C HSAH+RSS  ++++TKERY QC N+NCG TFVT E++ R I+ P+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

134) Dd1591_1808 in NC_012912


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 31/53 (59%), Positives = 42/53 (80%), Gaps = 0/53 (0%)

Query  1   MMHCPLCRHSAHARSSRYLSENTKERYHQCTNVNCGHTFVTMEAITRSIMVPG  53
           MM+CP C HSAH+RSS  ++++TKERY QC N+NCG TFVT E++ R I+ P+
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

135) ogrK in NC_006155


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 34/56 (61%), Positives = 41/56 (74%), Gaps = 0/56 (0%)

Query  1   MFNCPLCHQAAHTRSSSQVTTETKERYHQCTNVNCGHTFVTMESFMRSISKPGEIN  56
           M NCP C ++AHTRSS QVT  TKERY QC N+NCG TFVT E+ +R I  P+ +N
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVN  56

136) rlsB in NC_013971


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 52.9 bits (181),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 41/60 (69%), Gaps = 0/60 (0%)

Query  1   MMRCPVCNNASHTRTSRYISEQTKEAYYQCQNIRCSCTFKTIESVAKILTKPDAEISSPP  60
           MM CP C +++HTR+S  +++ TKE Y QCQNI C+ TF T E+V +++  P    ++PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

137) SG1859 in NC_007712


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 37/72 (52%), Positives = 49/72 (69%), Gaps = 1/72 (1%)

Query  1   MMHCPLCGQAAhtrtrhyitttreryN-QCTNINCGHTFITHETFTRSICVPRQIEPAPP  59
           MM+CP CG++AHTR+   +T +      QC NINCG TF+THET  R I  P  ++ APP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  60  HPSQSGQGMLQF  71
           HP+ SGQG ++F
Sbjct  61  HPTVSGQGHMNF  72

138) Rahaq2_5036 in NC_016819


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 28/60 (47%), Positives = 42/60 (70%), Gaps = 0/60 (0%)

Query  1   MMRCPLCNHSAHIRTSRYLSQQTKESYYQCQNIECSCTFKTIETVSKILCSPTFEKTEGA  60
           MM CP C HSAH R+S  +++ TKE Y QCQNI+C+ TF T ETV +++ +P++ +   +
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

139) F504_3527 in NC_021745


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 50.5 bits (172),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 30/66 (46%), Positives = 41/66 (63%), Gaps = 5/66 (7%)

Query  1   MNCPHCGSVANIRTSRPVSRITRELYCQCSNVLCGHTFVSLVEVVR-----TLSPSSTPD  55
           MNCP CG  A+ R+S  V+  T+E YCQC N+ CG TFV+   VVR     +L  ++ P+
Sbjct  2   MNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPPH  61

Query  56  PEVARQ  61
           P V+ Q
Sbjct  62  PTVSGQ  67

140) EbC_01280 in NC_014306


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 27/61 (45%), Positives = 40/61 (66%), Gaps = 2/61 (3%)

Query  1   MFTCPKCNASAKTRTSVRLSELTRRSYHQCNNLACGVTFTTLDSVEHFLNHVTPVAAHNV  60
           M  CPKC  SA TR+S ++++ T+  Y QC+N+ CG TF T ++V +F+  VTP   +N 
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFI--VTPALVNNA  58

Query  61  P  61
           P
Sbjct  59  P  59

141) Rpic12D_3117 in NC_012856


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 30/67 (45%), Positives = 42/67 (63%), Gaps = 5/67 (7%)

Query  2   KINCPHCSSVANIRSSRRVTRFTRELYCQCSNLECGHTFVALTEVVR-----TLAPSNTP  56
            +NCP C+  A+ RSS +VT  T+E YCQC N++CG TFV+   VVR     +L  +  P
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  57  DPEVAQQ  63
           +P V+ Q
Sbjct  61  HPTVSGQ  67

142) RSc0964 in NC_003295


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 30/66 (46%), Positives = 40/66 (61%), Gaps = 5/66 (7%)

Query  1   MNCPHCGSVATIRTSRPVSRITRELYCQCSNVLCGHTFVSLVEVVR-----TLSPSSTPD  55
           MNCP CG  A  R+S  V+  T+E YCQC N+ CG TFV+   VVR     +L  ++ P+
Sbjct  2   MNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPPH  61

Query  56  PEVARQ  61
           P V+ Q
Sbjct  62  PTVSGQ  67

143) EcolC_0050 in NC_010468


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 48.2 bits (163),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 31/65 (48%), Positives = 46/65 (71%), Gaps = 0/65 (0%)

Query  1   MRCPFCRHSAHTRTSRYVSDNVKESYLQCQNIYCSATFKTHESICAVIRSPVTEEKPAPA  60
           M CP C HSAHTR+S  V+D+ KE Y QCQNI C++TF THE++   I +P   ++++P 
Sbjct  2   MNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPPH  61

Query  61  STAPA  65
           +T ++
Sbjct  62  PTVSG  66

144) EC042_3995A in NC_017626


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 31/65 (48%), Positives = 46/65 (71%), Gaps = 0/65 (0%)

Query  1   MRCPFCRHSAHTRTSRYVSDNVKESYLQCQNIYCSATFKTHESICAVIRSPVTEEKPAPV  60
           M CP C HSAHTR+S  V+D+ KE Y QCQNI C++TF THE++   I +P   ++++P 
Sbjct  2   MNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPPH  61

Query  61  STAPA  65
           +T ++
Sbjct  62  PTVSG  66

145) rlsB in NC_010694


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 46.6 bits (157),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 27/53 (51%), Positives = 37/53 (70%), Gaps = 0/53 (0%)

Query  1   MMRCPFCNNSAHTRTSRYISGQTKEAYYQCQNIRCSCTFKTIESIAKVLRKPA  53
           MM CP C +SAHTR+S  +++ TKE Y QCQNI C+ TF T E++ + +  PA
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPA  53

146) rlsB in NC_012214


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 46.6 bits (157),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 26/59 (45%), Positives = 39/59 (67%), Gaps = 0/59 (0%)

Query  1   MRCPICNNASHTRTSRYISGQTKEAYYQCQNIRCSCTFKTIESVTKILRKPDAEISFPP  59
           M CP C +++HTR+S  +++ TKE Y QCQNI C+ TF T E+V +++  P    + PP
Sbjct  2   MNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

147) EBL_c09390 in NC_017910


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  ++DS KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

148) SARI_03882 in NC_010067


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  ++DS KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

149) SNSL254_A2956 in NC_011080


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  ++DS KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

150) SN31241_38490 in NC_021902


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  ++DS KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

151) SBOV27751 in NC_022241


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  +++S KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

152) CFSAN001992_19720 in NC_020307


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  +++S KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

153) SSPA3989 in NC_011147


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  +++S KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

154) SPA4293 in NC_006511


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  +++S KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

155) SPAB_03417 in NC_010102


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  +++S KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

156) SL1344_2717 in NC_016810


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 45.0 bits (151),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 40/57 (71%), Gaps = 0/57 (0%)

Query  1   MMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEK  57
           MM CP C  +AH R+S  +++S KE Y QCQN++C++TF THE++   I +P + ++
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNN  57

157) Q7S_14510 in NC_017047


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 43.7 bits (146),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 27/53 (51%), Positives = 37/53 (70%), Gaps = 0/53 (0%)

Query  5   AHARSSRYLSINIKERYHQCQNINCSCTFKTHESIADIIVEPGTVHAVQFHPD  57
           AH+RSS  ++ + KERY QCQNINC+ TF THE++  +IV P+ V+    HP 
Sbjct  11  AHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPPHPT  63

158) EpC_22070 in NC_012214


> NC_004631_P3|66|G62|29144549|NP_807891.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|63728..63946|-|t4294|positive 
regulator of late gene transcription
Length=72

 Score = 41.6 bits (138),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 0/61 (0%)

Query  1   MFRCPFCGAMARTRTSRKITDMTIRQYHQCQNLECSRSFTTLNSVEREVTRRADAKPLPP  60
           M  CP CG  A+TR+S ++TD T  +Y QCQN++C+ +F T ++V R +   A  +  PP
Sbjct  1   MMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPP  60

Query  61  D  61
           +
Sbjct  61  H  61