Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
putative DNA binding protein |
NC_013364 (Escherichia coli 11128) |
1e-25 |
100 |
|
regulatory protein |
NC_013361 (Escherichia coli 11368) |
1e-25 |
100 |
|
DNA binding protein |
NC_018650 (Escherichia coli 2009EL-2050) |
1e-25 |
100 |
|
DNA binding protein |
NC_018661 (Escherichia coli 2009EL-2071) |
1e-25 |
100 |
|
putative DNA binding protein |
NC_018658 (Escherichia coli 2011C-3493) |
1e-25 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
1e-25 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
1e-25 |
100 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
1e-25 |
100 |
|
hypothetical protein |
NC_013008 (Escherichia coli TW14359) |
1e-25 |
100 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
1e-25 |
100 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
1e-25 |
100 |
|
transcriptional regulator |
NC_017631 (Escherichia coli ABU 83972) |
3e-25 |
99 |
|
regulatory protein |
NC_008253 (Escherichia coli 536) |
6e-25 |
96 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
6e-25 |
96 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
6e-25 |
96 |
|
hypothetical protein |
NC_011745 (Escherichia coli ED1a) |
6e-25 |
96 |
|
AlpA family transcriptional regulator |
NC_010498 (Escherichia coli SMS-3-5) |
6e-25 |
96 |
|
putative regulatory protein |
NC_017633 (Escherichia coli ETEC H10407) |
7e-25 |
96 |
|
hypothetical protein |
NC_011742 (Escherichia coli S88) |
7e-25 |
94 |
|
hypothetical protein |
NC_017632 (Escherichia coli UM146) |
3e-24 |
94 |
|
hypothetical protein |
NC_007946 (Escherichia coli UTI89) |
3e-24 |
94 |
|
hypothetical protein |
NC_017646 (Escherichia coli CE10) |
1e-23 |
91 |
|
putative phage regulatory protein |
NC_011750 (Escherichia coli IAI39) |
1e-23 |
91 |
|
hypothetical protein |
NC_017644 (Escherichia coli NA114) |
1e-23 |
91 |
|
hypothetical protein |
NC_011742 (Escherichia coli S88) |
1e-23 |
91 |
|
AlpA family transcriptional regulator |
NC_010498 (Escherichia coli SMS-3-5) |
1e-23 |
91 |
|
prophage CP4-57 regulatory protein |
NC_009801 (Escherichia coli E24377A) |
2e-23 |
91 |
|
putative regulatory protein |
NC_017626 (Escherichia coli 042) |
2e-23 |
90 |
|
phage regulatory protein |
NC_011748 (Escherichia coli 55989) |
2e-23 |
90 |
|
transcriptional regulator |
NC_017631 (Escherichia coli ABU 83972) |
1e-22 |
88 |
|
Transcriptional regulator, AlpA |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
8e-21 |
93 |
|
phage regulatory protein |
NC_017731 (Providencia stuartii MRSN 2154) |
4e-16 |
65 |
|
AlpA family protein |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
1e-15 |
70 |
|
phage regulatory protein |
NC_017731 (Providencia stuartii MRSN 2154) |
3e-15 |
76 |
|
transcriptional regulator AlpA family |
NC_011283 (Klebsiella pneumoniae 342) |
1e-14 |
72 |
|
transcriptional regulator |
NC_013716 (Citrobacter rodentium ICC168) |
1e-14 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018650 (Escherichia coli 2009EL-2050) |
1e-14 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018650 (Escherichia coli 2009EL-2050) |
1e-14 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018661 (Escherichia coli 2009EL-2071) |
1e-14 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018661 (Escherichia coli 2009EL-2071) |
1e-14 |
70 |
|
putative Prophage CP4-57 regulatory protein |
NC_018658 (Escherichia coli 2011C-3493) |
1e-14 |
70 |
|
putative Prophage CP4-57 regulatory protein |
NC_018658 (Escherichia coli 2011C-3493) |
1e-14 |
70 |
|
regulatory protein |
NC_008253 (Escherichia coli 536) |
1e-14 |
70 |
|
prophage regulatory protein AlpA |
NC_017631 (Escherichia coli ABU 83972) |
1e-14 |
70 |
|
putative regulatory protein |
NC_017631 (Escherichia coli ABU 83972) |
1e-14 |
70 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
1e-14 |
70 |
|
hypothetical protein |
NC_013654 (Escherichia coli SE15) |
1e-14 |
70 |
|
putative regulatory protein |
NC_020418 (Morganella morganii KT) |
1e-14 |
72 |
|
transcriptional regulator |
NC_013353 (Escherichia coli 12009) |
1e-14 |
70 |
|
regulatory protein |
NC_013353 (Escherichia coli 12009) |
1e-14 |
70 |
|
transcriptional regulator |
NC_013941 (Escherichia coli CB9615) |
1e-14 |
70 |
|
hypothetical protein |
NC_017652 (Escherichia coli clone D i14) |
1e-14 |
70 |
|
hypothetical protein |
NC_017651 (Escherichia coli clone D i2) |
1e-14 |
70 |
|
putative regulatory protein |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
1e-14 |
70 |
|
hypothetical protein |
NC_017626 (Escherichia coli 042) |
1e-14 |
68 |
|
hypothetical protein |
NC_013361 (Escherichia coli 11368) |
1e-14 |
68 |
|
hypothetical protein |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-14 |
68 |
|
hypothetical protein |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-14 |
68 |
|
hypothetical protein |
NC_018658 (Escherichia coli 2011C-3493) |
2e-14 |
68 |
|
hypothetical protein |
NC_017644 (Escherichia coli NA114) |
2e-14 |
70 |
|
regulatory protein |
NC_021818 (Salmonella enterica CFSAN002050) |
2e-14 |
65 |
|
Regulator of excision |
NC_017328 (Shigella flexneri 2002017) |
2e-14 |
70 |
|
hypothetical protein |
NC_004741 (Shigella flexneri 2457T) |
2e-14 |
70 |
|
hypothetical protein |
NC_004337 (Shigella flexneri 301) |
2e-14 |
70 |
|
phage transcriptional regulator AlpA |
NC_018405 (Enterobacter cloacae ENHKU01) |
3e-14 |
68 |
|
putative DNA binding protein |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
3e-14 |
70 |
|
phage transcriptional regulator AlpA |
NC_013592 (Dickeya dadantii Ech586) |
3e-14 |
66 |
|
phage transcriptional regulator AlpA |
NC_015663 (Enterobacter aerogenes KCTC 2190) |
4e-14 |
70 |
|
Rha family transcriptional regulator |
NC_021500 (Enterobacter sp. R4-368) |
4e-14 |
68 |
|
putative regulatory protein |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
7e-14 |
68 |
|
phage transcriptional regulator AlpA |
NC_010465 (Yersinia pseudotuberculosis YPIII) |
7e-14 |
68 |
|
regulatory protein |
NC_008253 (Escherichia coli 536) |
8e-14 |
68 |
|
putative prophage regulatory protein |
NC_017631 (Escherichia coli ABU 83972) |
8e-14 |
68 |
|
transcriptional regulator, AlpA family |
NC_017628 (Escherichia coli IHE3034) |
8e-14 |
68 |
|
hypothetical protein |
NC_017644 (Escherichia coli NA114) |
8e-14 |
68 |
|
putative transcriptional regulator |
NC_022370 (Escherichia coli PMV-1) |
8e-14 |
68 |
|
putative regulatory protein |
NC_017632 (Escherichia coli UM146) |
8e-14 |
68 |
|
transcriptional regulator |
NC_013361 (Escherichia coli 11368) |
8e-14 |
66 |
|
phage transcriptional regulator, AlpA |
NC_012917 (Pectobacterium carotovorum PC1) |
1e-13 |
66 |
|
DNA binding protein |
NC_013353 (Escherichia coli 12009) |
1e-13 |
67 |
|
phage transcriptional regulator, AlpA |
NC_013421 (Pectobacterium wasabiae WPP163) |
2e-13 |
66 |
|
transcriptional regulator |
NC_013353 (Escherichia coli 12009) |
2e-13 |
66 |
|
InterPro motifs Prophage CP4-57 regulatory protein (AlpA) |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-13 |
66 |
|
InterPro motifs Prophage CP4-57 regulatory protein (AlpA) |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-13 |
66 |
|
InterPro motifs Prophage CP4-57 regulatory protein (AlpA) |
NC_018658 (Escherichia coli 2011C-3493) |
2e-13 |
66 |
|
Putative transcriptional regulator |
NC_017663 (Escherichia coli P12b) |
2e-13 |
66 |
|
prophage CP4-57 regulatory protein AlpA |
NC_010498 (Escherichia coli SMS-3-5) |
2e-13 |
66 |
|
phage regulatory protein AlpA |
NC_017641 (Escherichia coli UMNK88) |
2e-13 |
66 |
|
transcriptional regulatory protein |
NC_021591 (Serratia odorifera 4Rx13) |
3e-13 |
64 |
|
hypothetical protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
4e-13 |
66 |
|
regulatory protein |
NC_011740 (Escherichia fergusonii ATCC 35469) |
7e-13 |
66 |
|
phage-regulatory protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
2e-12 |
64 |
|
hypothetical protein |
NC_013961 (Erwinia amylovora CFBP1430) |
2e-12 |
64 |
|
phage transcriptional regulator, AlpA |
NC_016902 (Escherichia coli KO11FL) |
5e-12 |
56 |
|
phage regulatory protein |
NC_017660 (Escherichia coli KO11FL) |
5e-12 |
56 |
|
Rha family transcriptional regulator |
NC_022364 (Escherichia coli LY180) |
5e-12 |
56 |
|
hypothetical protein |
NC_017635 (Escherichia coli W) |
5e-12 |
56 |
|
phage regulatory protein |
NC_017664 (Escherichia coli W) |
5e-12 |
56 |
|
putative IS3 family transposase orfB |
NC_020260 (Cronobacter sakazakii Sp291) |
4e-09 |
53 |
|
putative IS3 family transposase orfB |
NC_014121 (Enterobacter cloacae ATCC 13047) |
4e-09 |
53 |
|
Predicted transcriptional regulator |
NC_021046 (Enterobacter cloacae NCTC 9394) |
1e-06 |
44 |
|
DNA-binding protein |
NC_020307 (Salmonella enterica CFSAN001992) |
1e-06 |
44 |
|
transcriptional regulator |
NC_009662 (Nitratiruptor sp. SB155-2) |
5e-06 |
50 |
|
phage transcriptional regulator AlpA |
NC_009438 (Shewanella putrefaciens CN-32) |
7e-06 |
44 |
|
Transcriptional regulator, AlpA like protein |
NC_017309 (Edwardsiella tarda FL6-60) |
1e-05 |
43 |
|
putative phage DNA binding protein |
NC_011741 (Escherichia coli IAI1) |
1e-05 |
43 |
|
putative phage DNA binding protein |
NC_020796 (Edwardsiella tarda C07-087) |
2e-05 |
44 |
|
phage transcriptional regulator AlpA |
NC_015731 (Nitrosomonas sp. Is79A3) |
2e-05 |
41 |
|
CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage |
NC_013892 (Xenorhabdus bovienii SS-2004) |
2e-05 |
45 |
|
prophage CP4-57 regulatory protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
3e-05 |
45 |
|
hypothetical protein |
NC_010694 (Erwinia tasmaniensis Et1/99) |
3e-05 |
44 |
|
phage-like protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
5e-05 |
44 |
|
prophage PSPPH01, DNA-binding protein |
NC_005773 (Pseudomonas syringae 1448A) |
7e-05 |
41 |
|
putative phage transcriptional AlpA-like regulator |
NC_017631 (Escherichia coli ABU 83972) |
8e-05 |
42 |
|
putative prophage transcriptional regulator |
NC_017633 (Escherichia coli ETEC H10407) |
8e-05 |
42 |
|
hypothetical protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
9e-05 |
41 |
|
CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage |
NC_013892 (Xenorhabdus bovienii SS-2004) |
1e-04 |
43 |
|
phage transcriptional regulator, AlpA |
NC_009436 (Enterobacter sp. 638) |
1e-04 |
42 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
1e-04 |
42 |
|
phage-like protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
1e-04 |
41 |
|
putative regulatory protein from prophage (AlpA family) |
NC_011745 (Escherichia coli ED1a) |
2e-04 |
43 |
|
phage transcriptional regulator, AlpA |
NC_022268 (Serratia sp. ATCC 39006) |
2e-04 |
41 |
|
phage-like protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
2e-04 |
41 |
|
transcriptional regulator |
NC_005810 (Yersinia pestis 91001) |
2e-04 |
41 |
|
AlpA family transcriptional regulator |
NC_017168 (Yersinia pestis A1122) |
2e-04 |
41 |
|
AlpA family transcriptional regulator |
NC_010159 (Yersinia pestis Angola) |
2e-04 |
41 |
|
transcriptional regulator |
NC_008150 (Yersinia pestis Antiqua) |
2e-04 |
41 |
|
DNA-binding protein |
NC_017265 (Yersinia pestis Harbin 35) |
2e-04 |
41 |
|
transcriptional regulator |
NC_008149 (Yersinia pestis Nepal516) |
2e-04 |
41 |
|
transcriptional regulator |
NC_009381 (Yersinia pestis Pestoides F) |
2e-04 |
41 |
|
DNA-binding protein |
NC_014012 (Shewanella violacea DSS12) |
3e-04 |
42 |
|
phage transcriptional regulator AlpA |
NC_010322 (Pseudomonas putida GB-1) |
0.020 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002655_P2' AND ph.id_pai_orf='66' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc