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PAthogenisity Island DataBase (PAI DB)

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Homologs of PMI2608 gene of NC_010554_P1

200

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PMI2608
( YP_002152324.1 )

prophage regulatory protein

NC_010554
(Proteus mirabilis HI4320)

6e-24

100

2) alpA
( YP_049728.1 )

prophage regulatory protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

6e-21

3) Q7S_09575
( YP_005401716.1 )

putative prophage regulatory protein

NC_017047
(Rahnella aquatilis HX2)

7e-21

4) KOX_24535
( YP_005020861.1 )

putative prophage regulatory protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

2e-20

5) W5S_1631
( YP_006282595.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

2e-20

6) Dd586_1466
( YP_003333039.1 )

phage transcriptional regulator AlpA

NC_013592
(Dickeya dadantii Ech586)

3e-20

7) KPK_1789
( YP_002237636.1 )

transcriptional regulator AlpA family

NC_011283
(Klebsiella pneumoniae 342)

4e-20

8) Dd586_2658
( YP_003334205.1 )

phage transcriptional regulator AlpA

NC_013592
(Dickeya dadantii Ech586)

5e-20

9) Dd1591_1496
( YP_003003833.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

5e-20

10) Pecwa_1687
( YP_003259081.1 )

phage transcriptional regulator, AlpA

NC_013421
(Pectobacterium wasabiae WPP163)

6e-20

11) Rahaq2_1737
( YP_005199750.1 )

putative transcriptional regulator

NC_016818
(Rahnella aquatilis CIP 78.65)

6e-20

12) alpA
( YP_003883704.1 )

DNA-binding protein

NC_014500
(Dickeya dadantii 3937)

1e-19

13) CKO_00903
( YP_001452489.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

2e-19

14) alpA2
( YP_002920255.1 )

putative transcriptional regulator

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

2e-19

15) YPDSF_1221
( YP_001162590.1 )

transcriptional regulator

NC_009381
(Yersinia pestis Pestoides F)

2e-19

16) YPTS_1706
( YP_001872132.1 )

phage transcriptional regulator AlpA

NC_010634
(Yersinia pseudotuberculosis PB1/+)

2e-19

17) CKO_04347
( YP_001455839.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

3e-12

18) ASA_3077
( YP_001142822.1 )

prophage regulatory protein

NC_009348
(Aeromonas salmonicida A449)

1e-11

19) W5S_0465
( YP_006281463.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

8e-11

20) Alide2_3071
( YP_004388933.1 )

phage transcriptional regulator AlpA

NC_015422
(Alicycliphilus denitrificans K601)

1e-09

21) PSEBR_a2011
( YP_004353256.1 )

AlpA family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

1e-09

22) Shewmr7_1777
( YP_737827.1 )

phage transcriptional regulator, AlpA

NC_008322
(Shewanella sp. MR-7)

1e-09

23) Mpe_A2332
( YP_001021523.1 )

phage transcriptional regulator, AlpA

NC_008825
(Methylibium petroleiphilum PM1)

1e-09

24) alpa
( YP_004713542.1 )

phage transcriptional regulator AlpA

NC_015740
(Pseudomonas stutzeri ATCC 17588)

1e-09

25) alpA1
( NP_992437.1 )

transcriptional regulator

NC_005810
(Yersinia pestis 91001)

1e-09

26) A1122_19325
( YP_005523499.1 )

AlpA family transcriptional regulator

NC_017168
(Yersinia pestis A1122)

1e-09

27) YpAngola_A1363
( YP_001605891.1 )

AlpA family transcriptional regulator

NC_010159
(Yersinia pestis Angola)

1e-09

28) YPA_0571
( YP_650484.1 )

transcriptional regulator

NC_008150
(Yersinia pestis Antiqua)

1e-09

29) YPC_1143
( YP_005623090.1 )

DNA-binding protein

NC_017265
(Yersinia pestis Harbin 35)

1e-09

30) YPN_2905
( YP_648832.1 )

transcriptional regulator

NC_008149
(Yersinia pestis Nepal516)

1e-09

31) YPDSF_2604
( YP_001163945.1 )

transcriptional regulator

NC_009381
(Yersinia pestis Pestoides F)

1e-09

32) Fraau_1984
( YP_005378053.1 )

putative transcriptional regulator

NC_017033
(Frateuria aurantia DSM 6220)

1e-09

33) alpA3
( YP_001630044.1 )

transcriptional regulator

NC_010170
(Bordetella petrii DSM 12804)

1e-09

34) Fraau_3057
( YP_005379067.1 )

putative transcriptional regulator

NC_017033
(Frateuria aurantia DSM 6220)

2e-09

35) alpa
( YP_004714828.1 )

phage transcriptional regulator AlpA

NC_015740
(Pseudomonas stutzeri ATCC 17588)

2e-09

36) Marme_2105
( YP_004313189.1 )

phage transcriptional regulator, AlpA

NC_015276
(Marinomonas mediterranea MMB-1)

3e-09

37) Alide_2723
( YP_004127341.1 )

prophage cp4-57 regulatory

NC_014910
(Alicycliphilus denitrificans BC)

3e-09

38) Alide2_1737
( YP_004387641.1 )

phage transcriptional regulator AlpA

NC_015422
(Alicycliphilus denitrificans K601)

3e-09

39) Tmz1t_1000
( YP_002354662.1 )

phage transcriptional regulator AlpA

NC_011662
(Thauera sp. MZ1T)

3e-09

40) SVI_1340
( YP_003556089.1 )

DNA-binding protein

NC_014012
(Shewanella violacea DSS12)

4e-09

41) A458_06100
( YP_006456889.1 )

phage transcriptional regulator AlpA

NC_018028
(Pseudomonas stutzeri CCUG 29243)

4e-09

42) Neut_0125
( YP_746378.1 )

phage transcriptional regulator AlpA

NC_008344
(Nitrosomonas eutropha C91)

4e-09

43) Pecwa_1667
( YP_003259064.1 )

phage transcriptional regulator, AlpA

NC_013421
(Pectobacterium wasabiae WPP163)

4e-09

44) I636_19330
( YP_008185805.1 )

hypothetical protein

NC_021714
(Alteromonas macleodii Ionian Sea UM4b)

5e-09

45) alpA1
( YP_003039844.1 )

predicted phage transcriptional regulator

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

5e-09

46) alpA1
( YP_003042806.1 )

putative dna binding protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

5e-09

47) Tgr7_2812
( YP_002514872.1 )

phage transcriptional regulator AlpA

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

5e-09

48) Bpet1289
( YP_001629893.1 )

transcriptional regulator

NC_010170
(Bordetella petrii DSM 12804)

5e-09

49) Sbal223_0381
( YP_002356338.1 )

phage transcriptional regulator AlpA

NC_011663
(Shewanella baltica OS223)

8e-09

50) Tola_2395
( YP_002893578.1 )

phage transcriptional regulator, AlpA

NC_012691
(Tolumonas auensis DSM 9187)

8e-09

51) FTN_0015
( YP_897680.1 )

AlpA family regulatory protein

NC_008601
(Francisella novicida U112)

1e-08

52) Fphi_1927
( YP_001677705.1 )

AlpA family regulatory protein

NC_010336
(Francisella philomiragia ATCC 25017)

1e-08

53) ebD61
( YP_158418.1 )

transcriptional regulator

NC_006513
(Aromatoleum aromaticum EbN1)

1e-08

54) Dd1591_0481
( YP_003002845.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

1e-08

55) B479_23190
( YP_007231470.1 )

phage transcriptional regulator, AlpA

NC_019905
(Pseudomonas putida PC9)

1e-08

56) PPS_2374
( YP_004701815.1 )

phage transcriptional regulator AlpA

NC_015733
(Pseudomonas putida S16)

1e-08

57) Shewmr4_2784
( YP_734912.1 )

phage transcriptional regulator, AlpA

NC_008321
(Shewanella sp. MR-4)

1e-08

58) PCNPT3_08010
( YP_007640378.1 )

DNA-binding protein

NC_020802
(Psychromonas sp. CNPT3)

1e-08

59) YE105_C2856
( YP_004299055.1 )

phage transcriptional regulator, AlpA

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-08

60) PputGB1_4755
( YP_001670977.1 )

phage transcriptional regulator AlpA

NC_010322
(Pseudomonas putida GB-1)

2e-08

61) Despr_0272
( YP_004193747.1 )

phage transcriptional regulator, AlpA

NC_014972
(Desulfobulbus propionicus DSM 2032)

2e-08

62) XC_2072
( YP_243152.1 )

hypothetical protein

NC_007086
(Xanthomonas campestris 8004)

2e-08

63) xccb100_2403
( YP_001903808.1 )

phage-related regulatory protein

NC_010688
(Xanthomonas campestris B100)

2e-08

64) XCAW_01643
( YP_007649638.1 )

Phage-related regulatory protein

NC_020815
(Xanthomonas citri Aw12879)

2e-08

65) NH44784_010881
( YP_008028188.1 )

Transcriptional regulator in PFGI-1-like cluster

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-08

66) HEAR1968
( YP_001100239.1 )

CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage

NC_009138
(Herminiimonas arsenicoxydans )

2e-08

67) Plav_3376
( YP_001414637.1 )

phage transcriptional regulator AlpA

NC_009719
(Parvibaculum lavamentivorans DS-1)

2e-08

68) NH44784_010091
( YP_008028110.1 )

Transcriptional regulator in PFGI-1-like cluster

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-08

69) Ajs_1320
( YP_985616.1 )

phage transcriptional regulator AlpA

NC_008782
(Acidovorax sp. JS42)

2e-08

70) Alide_3995
( YP_004128588.1 )

prophage cp4-57 regulatory

NC_014910
(Alicycliphilus denitrificans BC)

2e-08

71) alpA1
( YP_001629631.1 )

transcriptional regulator

NC_010170
(Bordetella petrii DSM 12804)

2e-08

72) alpA
( YP_584437.1 )

DNA-binding transcriptional activator

NC_007973
(Cupriavidus metallidurans CH34)

2e-08

73) PADK2_12295
( YP_006482444.1 )

hypothetical protein

NC_018080
(Pseudomonas aeruginosa DK2)

2e-08

74) PLES_27091
( YP_002440302.1 )

hypothetical protein

NC_011770
(Pseudomonas aeruginosa LESB58)

2e-08

75) SMD_1576
( YP_006184307.1 )

transcriptional regulator

NC_017671
(Stenotrophomonas maltophilia D457)

2e-08

76) TMO_c0096
( YP_006373688.1 )

phage-like protein

NC_017958
(Tistrella mobilis KA081020-065)

2e-08

77) AXYL_01049
( YP_003977110.1 )

prophage CP4-57 regulatory protein AlpA

NC_014640
(Achromobacter xylosoxidans A8)

2e-08

78) Spea_1260
( YP_001501122.1 )

phage transcriptional regulator AlpA

NC_009901
(Shewanella pealeana ATCC 700345)

3e-08

79) Sputcn32_3522
( YP_001185030.1 )

phage transcriptional regulator AlpA

NC_009438
(Shewanella putrefaciens CN-32)

3e-08

80) alpA2
( YP_001632930.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

3e-08

81) Daci_4141
( YP_001565157.1 )

phage transcriptional regulator AlpA

NC_010002
(Delftia acidovorans SPH-1)

3e-08

82) NCGM2_1450
( YP_005979701.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

3e-08

83) alpA
( YP_005937940.1 )

phage transcriptional regulator AlpA

NC_017532
(Pseudomonas stutzeri DSM 4166)

3e-08

84) NAL212_2044
( YP_004295042.1 )

phage transcriptional regulator, AlpA

NC_015222
(Nitrosomonas sp. AL212)

3e-08

85) FN3523_0015
( YP_005823069.1 )

regulatory protein, AlpA family

NC_017449
(Francisella novicida 3523)

3e-08

86) Bpet2882
( YP_001631492.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

4e-08

87) NH44784_008971
( YP_008027999.1 )

Transcriptional regulator in PFGI-1-like cluster

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

4e-08

88) Ajs_1454
( YP_985740.1 )

phage transcriptional regulator AlpA

NC_008782
(Acidovorax sp. JS42)

4e-08

89) XCV2415
( YP_364146.1 )

AlpA family regulatory protein

NC_007508
(Xanthomonas campestris 85-10)

4e-08

90) XF1786
( NP_299074.1 )

hypothetical protein

NC_002488
(Xylella fastidiosa 9a5c)

4e-08

91) Dda3937_01305
( YP_003881185.1 )

DNA-binding protein

NC_014500
(Dickeya dadantii 3937)

4e-08

92) Dd586_3773
( YP_003335309.1 )

phage transcriptional regulator AlpA

NC_013592
(Dickeya dadantii Ech586)

4e-08

93) Dd703_3550
( YP_002989130.1 )

phage transcriptional regulator AlpA

NC_012880
(Dickeya dadantii Ech703)

4e-08

94) Dd1591_3697
( YP_003005981.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

4e-08

95) Dd1591_3709
( YP_003005992.1 )

phage transcriptional regulator AlpA

NC_012912
(Dickeya zeae Ech1591)

4e-08

96) Pmen_1159
( YP_001186658.1 )

phage transcriptional regulator AlpA

NC_009439
(Pseudomonas mendocina ymp)

5e-08

97) Thivi_2364
( YP_006414434.1 )

putative transcriptional regulator

NC_018012
(Thiocystis violascens DSM 198)

6e-08

98) Fphi_1931
( YP_001678565.1 )

phage transcriptional regulator, AlpA

NC_010336
(Francisella philomiragia ATCC 25017)

6e-08

99) Shewmr4_1700
( YP_733832.1 )

phage transcriptional regulator, AlpA

NC_008321
(Shewanella sp. MR-4)

1e-07

100) Hhal_1156
( YP_001002734.1 )

phage transcriptional regulator AlpA

NC_008789
(Halorhodospira halophila SL1)

1e-07

101) SEEH1578_21295
( YP_008248310.1 )

Phage AlpA Prophage CP4-57 regulatory protein (AlpA)

NC_021810
(Salmonella enterica 41578)

1e-07

102) SU5_02999
( YP_006088611.1 )

Phage_AlpA Prophage CP4-57 regulatory protein (AlpA)

NC_017623
(Salmonella enterica B182)

1e-07

103) CFSAN002069_19815
( YP_008252705.1 )

DNA-binding protein

NC_021812
(Salmonella enterica CFSAN002069)

1e-07

104) K734_03205
( YP_008034142.1 )

transcriptional regulator

NC_021286
(Idiomarina loihiensis GSL 199)

2e-07

105) IL0640
( YP_155030.1 )

transcriptional regulator

NC_006512
(Idiomarina loihiensis L2TR)

2e-07

106) ECSF_2233
( YP_003350223.1 )

putative transcriptional regulator

NC_013654
(Escherichia coli SE15)

2e-07

107) Maqu_0653
( YP_957938.1 )

phage transcriptional regulator AlpA

NC_008740
(Marinobacter aquaeolei VT8)

2e-07

108) H681_23115
( YP_007660030.1 )

DNA-binding protein

NC_020829
(Pseudomonas denitrificans ATCC 13867)

2e-07

109) AHML_05600
( YP_008042251.1 )

putative transcriptional regulator

NC_021290
(Aeromonas hydrophila ML09-119)

2e-07

110) CKO_03476
( YP_001454992.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

4e-07

111) Aave_0567
( YP_968946.1 )

phage transcriptional regulator AlpA

NC_008752
(Acidovorax citrulli AAC00-1)

4e-07

112) A79E_4453
( YP_006638213.1 )

transcriptional regulator

NC_018522
(Klebsiella pneumoniae 1084)

4e-07

113) A464_4539
( YP_008325131.1 )

hypothetical protein

NC_021870
(Salmonella bongori N268-08)

4e-07

114) Pput_3427
( YP_001268737.1 )

phage transcriptional regulator AlpA

NC_009512
(Pseudomonas putida F1)

4e-07

115) Sbal223_0384
( YP_002356341.1 )

phage transcriptional regulator AlpA

NC_011663
(Shewanella baltica OS223)

4e-07

116) NH8B_1936
( YP_004847165.1 )

phage transcriptional regulator AlpA

NC_016002
(Pseudogulbenkiania sp. NH8B)

5e-07

117) KP1_0641
( YP_002917564.1 )

hypothetical protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

5e-07

118) KPN_04704
( YP_001338321.1 )

hypothetical protein

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

5e-07

119) CV_0648
( NP_900318.1 )

prophage regulatory protein

NC_005085
(Chromobacterium violaceum ATCC 12472)

7e-07

120) Mesci_3844
( YP_004143011.1 )

prophage CP4-57 regulator

NC_014923
(Mesorhizobium ciceri WSM1271)

7e-07

121) PSF113_3346
( YP_005208742.1 )

transcriptional regulator in PFGI-1-like cluster

NC_016830
(Pseudomonas fluorescens F113)

8e-07

122) ETAC_13010
( YP_007630083.1 )

hypothetical protein

NC_020796
(Edwardsiella tarda C07-087)

9e-07

123) Nit79A3_1498
( YP_004694728.1 )

phage transcriptional regulator AlpA

NC_015731
(Nitrosomonas sp. Is79A3)

9e-07

124) UWK_00658
( YP_007466892.1 )

putative transcriptional regulator

NC_020304
(Desulfocapsa sulfexigens DSM 10523)

1e-06

125) NT08PM_0296
( YP_006239208.1 )

Vis

NC_017764
(Pasteurella multocida 3480)

1e-06

126) EC55989_0270
( YP_002401396.1 )

Phage transcriptional regulator, AlpA

NC_011748
(Escherichia coli 55989)

2e-06

127) TY21A_13425
( YP_007926936.1 )

putative DNA binding transcriptional regulator

NC_021176
(Salmonella enterica Ty21a)

2e-06

128) alpA
( YP_003469248.1 )

CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage

NC_013892
(Xenorhabdus bovienii SS-2004)

2e-06

129) t2651
( NP_806362.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

2e-06

130) HS_1424
( YP_719636.1 )

phage transcriptional regulator, AlpA

NC_008309
(Haemophilus somnus 129PT)

2e-06

131) Tcr_2205
( YP_873949.1 )

Phage AlpA family protein

NC_007520
(Thiomicrospira crunogena XCL-2)

2e-06

132) BBta_0434
( YP_001236626.1 )

prophage CP4-57 regulatory protein

NC_009485
(Bradyrhizobium sp. BTAi1)

3e-06

133) Spro_3885
( YP_001480109.1 )

phage transcriptional regulator AlpA

NC_009832
(Serratia proteamaculans 568)

3e-06

134) ambt_20755
( YP_004469444.1 )

phage transcriptional regulator, AlpA

NC_015554
(Alteromonas sp. SN2)

3e-06

135) W5S_3564
( YP_006284506.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

4e-06

136) Mesop_2566
( YP_004611132.1 )

phage transcriptional regulator AlpA

NC_015675
(Mesorhizobium opportunistum WSM2075)

5e-06

137) CFSAN002050_11655
( YP_008260247.1 )

AlpA family transcriptional regulator

NC_021818
(Salmonella enterica CFSAN002050)

5e-06

138) AHML_07190
( YP_008042569.1 )

DNA-binding protein

NC_021290
(Aeromonas hydrophila ML09-119)

5e-06

139) ELI_00935
( YP_457076.1 )

hypothetical protein

NC_007722
(Erythrobacter litoralis HTCC2594)

7e-06

140) RPC_0150
( YP_530044.1 )

phage transcriptional regulator, AlpA

NC_007925
(Rhodopseudomonas palustris BisB18)

7e-06

141) Dda3937_00943
( YP_003884284.1 )

regulatory protein

NC_014500
(Dickeya dadantii 3937)

8e-06

142) ESA_00625
( YP_001436745.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

9e-06

143) A3UG_04565
( YP_006476360.1 )

regulatory protein

NC_018079
(Enterobacter cloacae SDM)

1e-05

144) alpA
( YP_003467237.1 )

CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-05

145) alpA
( YP_003713511.1 )

prophage CP4-57 regulatory protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-05

146) Ping_1598
( YP_942995.1 )

phage transcriptional regulator AlpA

NC_008709
(Psychromonas ingrahamii 37)

1e-05

147) ECED1_3320
( YP_002399199.1 )

putative regulatory protein from prophage (AlpA family)

NC_011745
(Escherichia coli ED1a)

1e-05

148) YSA_03456
( YP_006385751.1 )

phage transcriptional regulator AlpA

NC_017986
(Pseudomonas putida ND6)

2e-05

149) AciX8_1756
( YP_005057125.1 )

phage transcriptional regulator, AlpA

NC_016631
(Granulicella mallensis MP5ACTX8)

2e-05

150) OA238_c14340
( YP_007699043.1 )

prophage regulatory protein-like protein

NC_020908
(Octadecabacter arcticus 238)

2e-05

151) S70_17370
( YP_006217975.1 )

phage-like protein

NC_017731
(Providencia stuartii MRSN 2154)

2e-05

152) YE105_C1330
( YP_004297529.1 )

Phage transcriptional regulator, AlpA

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-05

153) O3M_06345
( YP_006768931.1 )

phage transcriptional regulator AlpA

NC_018650
(Escherichia coli 2009EL-2050)

3e-05

154) O3O_19350
( YP_006783038.1 )

phage transcriptional regulator AlpA

NC_018661
(Escherichia coli 2009EL-2071)

3e-05

155) O3K_06300
( YP_006777968.1 )

phage transcriptional regulator AlpA

NC_018658
(Escherichia coli 2011C-3493)

3e-05

156) ECABU_c03460
( YP_006104481.1 )

putative phage transcriptional AlpA-like regulator

NC_017631
(Escherichia coli ABU 83972)

3e-05

157) ETEC_0317
( YP_006113906.1 )

putative prophage transcriptional regulator

NC_017633
(Escherichia coli ETEC H10407)

3e-05

158) A79E_1776
( YP_006635583.1 )

regulatory protein

NC_018522
(Klebsiella pneumoniae 1084)

3e-05

159) Z3946
( NP_289200.1 )

DNA binding protein

NC_002655
(Escherichia coli EDL933)

3e-05

160) ECs3513
( NP_311540.1 )

DNA binding protein

NC_002695
(Escherichia coli Sakai)

3e-05

161) ECSP_3595
( YP_003079433.1 )

DNA binding protein

NC_013008
(Escherichia coli TW14359)

3e-05

162) CDCO157_3275
( YP_006314142.1 )

putative DNA binding protein

NC_017906
(Escherichia coli Xuzhou21)

3e-05

163) ECO55CA74_24450
( YP_006161979.1 )

putative phage DNA binding protein

NC_017656
(Escherichia coli RM12579)

3e-05

164) ECED1_2322
( YP_002398256.1 )

putative DNA binding protein from phage origin

NC_011745
(Escherichia coli ED1a)

4e-05

165) Ser39006_1276
( YP_008521658.1 )

phage transcriptional regulator, AlpA

NC_022268
(Serratia sp. ATCC 39006)

4e-05

166) alpA
( YP_006028805.1 )

DNA-binding transcriptional activator; CP4-57 prophage

NC_017574
(Ralstonia solanacearum Po82)

4e-05

167) SLG_29070
( YP_004836039.1 )

putative AlpA family transcriptional regulator

NC_015976
(Sphingobium sp. SYK-6)

4e-05

168) Pmen_3994
( YP_001189473.1 )

phage transcriptional regulator AlpA

NC_009439
(Pseudomonas mendocina ymp)

5e-05

169) ECO55CA74_15695
( YP_006160264.1 )

DNA binding protein

NC_017656
(Escherichia coli RM12579)

5e-05

170) ECA2918
( YP_051009.1 )

phage-like protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

5e-05

171) Entcl_1099
( YP_003940650.1 )

phage transcriptional regulator AlpA

NC_014618
(Enterobacter cloacae SCF1)

6e-05

172) STBHUCCB_9230
( YP_005216499.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

6e-05

173) t04980
( YP_006892414.1 )

DNA binding protein

NC_004631
(Salmonella enterica Ty2)

6e-05

174) TY21A_04400
( YP_007925202.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

6e-05

175) PAGR_g2494
( YP_005993221.1 )

AlpA family phage transcriptional regulator

NC_017554
(Pantoea ananatis PA13)

7e-05

176) Pcryo_1618
( YP_580879.1 )

phage transcriptional regulator AlpA

NC_007969
(Psychrobacter cryohalolentis K5)

8e-05

177) ETAF_2788
( YP_005700382.1 )

Transcriptional regulator, AlpA like protein

NC_017309
(Edwardsiella tarda FL6-60)

8e-05

178) alpA
( YP_002389731.1 )

putative phage DNA binding protein

NC_011741
(Escherichia coli IAI1)

8e-05

179) CSSP291_03135
( YP_007439514.1 )

phage transcriptional regulator AlpA

NC_020260
(Cronobacter sakazakii Sp291)

1e-04

180) SARI_00926
( YP_001569981.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

9e-05

181) Pecwa_1730
( YP_003259124.1 )

phage transcriptional regulator, AlpA

NC_013421
(Pectobacterium wasabiae WPP163)

1e-04

182) SeSA_A2907
( YP_002115719.1 )

hypothetical protein

NC_011094
(Salmonella enterica CVM19633)

1e-04

183) Alide2_2695
( YP_004388566.1 )

phage transcriptional regulator AlpA

NC_015422
(Alicycliphilus denitrificans K601)

1e-04

184) EC042_2847A
( YP_006097150.1 )

putative Putative DNA binding protein

NC_017626
(Escherichia coli 042)

1e-04

185) SG2024
( YP_002226954.1 )

phage regulatory protein

NC_011274
(Salmonella enterica 287/91)

2e-04

186) SPUCDC_0899
( YP_008480588.1 )

putative phage regulatory protein

NC_022221
(Salmonella enterica CDC1983-67)

2e-04

187) SeD_A2334
( YP_002216088.1 )

hypothetical protein

NC_011205
(Salmonella enterica CT_02021853)

2e-04

188) SEN1998
( YP_002244091.1 )

phage regulatory protein

NC_011294
(Salmonella enterica P125109)

2e-04

189) SPUL_0899
( YP_005212129.1 )

putative phage regulatory protein

NC_016831
(Salmonella enterica RKS5078)

2e-04

190) I137_04075
( YP_008380346.1 )

DNA-binding protein

NC_021984
(Salmonella enterica S06004)

2e-04

191) SeAg_B2092
( YP_002146940.1 )

hypothetical protein

NC_011149
(Salmonella enterica SL483)

2e-04

192) ETAC_14735
( YP_007630428.1 )

putative phage DNA binding protein

NC_020796
(Edwardsiella tarda C07-087)

2e-04

193) SARI_00214
( YP_001569303.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-04

194) Ent638_2904
( YP_001177620.1 )

phage transcriptional regulator, AlpA

NC_009436
(Enterobacter sp. 638)

4e-04

195) Nitsa_1826
( YP_004168820.1 )

prophage cp4-57 regulatory

NC_014935
(Nitratifractor salsuginis DSM 16511)

6e-04

196) DaAHT2_2155
( YP_003691443.1 )

phage transcriptional regulator, AlpA

NC_014216
(Desulfurivibrio alkaliphilus AHT2)

0.001

197) PputGB1_4148
( YP_001670374.1 )

phage transcriptional regulator AlpA

NC_010322
(Pseudomonas putida GB-1)

0.001

198) SYNW2105
( NP_898196.1 )

transcriptional regulator

NC_005070
(Synechococcus sp. WH 8102)

0.001

199) D781_3436
( YP_007345839.1 )

putative transcriptional regulator

NC_020064
(Serratia marcescens FGI94)

0.002

200) W5S_1640
( YP_006282604.1 )

Phage transcriptional regulator, AlpA

NC_017845
(Pectobacterium sp. SCC3193)

0.016

• Sequence Alignments

1) PMI2608 in NC_010554


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score =  104 bits (376),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 62/62 (100%), Positives = 62/62 (100%), Gaps = 0/62 (0%)

Query  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60
           MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  61  NR  62
           NR
Sbjct  61  NR  62

2) alpA in NC_004547


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 56/62 (91%), Positives = 59/62 (96%), Gaps = 1/62 (1%)

Query  1   MTSHQLLRLKQVEVKTGLKRSQVYLYMKEGTFPRS-IKIGPASVAWLESEIDEWINLKLA  59
           MTSHQLLRLKQVE KTGLKRSQ+YLYMK G+FPRS IK+GPASVAWLESEIDEWINLKLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

3) Q7S_09575 in NC_017047


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 93.9 bits (337),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 55/62 (89%), Positives = 59/62 (96%), Gaps = 1/62 (1%)

Query  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKDGTFPRS-IKIGPASVAWLESEIDEWINIKLV  59
           MTSHQLLRLKQVEEKTGLKRSQIYLYMK+G+FPRS IK+GPASVAWLESEIDEWIN+KL 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  RR  61
            R
Sbjct  61  NR  62

4) KOX_24535 in NC_016612


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 92.6 bits (332),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 54/62 (88%), Positives = 58/62 (94%), Gaps = 1/62 (1%)

Query  1   MTSHQLLRLKQVEGKTGLKRSQIYLYMKDGTFPRS-IKIGPASVAWLESEIDEWINIKLV  59
           MTSHQLLRLKQVE KTGLKRSQIYLYMK+G+FPRS IK+GPASVAWLESEIDEWIN+KL 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  RR  61
            R
Sbjct  61  NR  62

5) W5S_1631 in NC_017845


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 55/62 (89%), Positives = 58/62 (94%), Gaps = 1/62 (1%)

Query  1   MTAHQLLRLKQVEVKTGLKRSQIYLYMKEGTFPSS-IKIGPASVAWLESEIDEWINLKLA  59
           MT+HQLLRLKQVE KTGLKRSQIYLYMK G+FP S IK+GPASVAWLESEIDEWINLKLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

6) Dd586_1466 in NC_013592


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 92.0 bits (330),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/62 (88%), Positives = 60/62 (97%), Gaps = 1/62 (1%)

Query  1   MSSHQLLRLRQVEEKTGLKRSQIYLYMKDGTFPAS-IKIGPASVAWLESEIDEWINFKLA  59
           M+SHQLLRL+QVEEKTGLKRSQIYLYMK+G+FP S IK+GPASVAWLESEIDEWIN+KLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

7) KPK_1789 in NC_011283


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 53/62 (86%), Positives = 57/62 (92%), Gaps = 1/62 (1%)

Query  6   MTTHQLLRLKQVEEKTGLKRSQIYLYMKNGDFPRS-IKIGPASVAWLESELDEWINRKLS  64
           MT+HQLLRLKQVEEKTGLKRSQIYLYMK G FPRS IK+GPASVAWLESE+DEWIN KL+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  65  RR  66
            R
Sbjct  61  NR  62

8) Dd586_2658 in NC_013592


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 91.2 bits (327),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 55/62 (89%), Positives = 57/62 (92%), Gaps = 1/62 (1%)

Query  1   MTSHQLLRLKQVEVKTGLKRSQIYLYMKEGTFPSS-IKIGPASVAWLESEIDGWINLKLA  59
           MTSHQLLRLKQVE KTGLKRSQIYLYMK G+FP S IK+GPASVAWLESEID WINLKLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

9) Dd1591_1496 in NC_012912


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 91.0 bits (326),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 56/62 (91%), Positives = 59/62 (96%), Gaps = 1/62 (1%)

Query  1   MTSHQLLRLRQVEEKTGLKRSQIYLYMKYGTFPAS-IKIGPASVAWLESEIDEWINLKLA  59
           MTSHQLLRL+QVEEKTGLKRSQIYLYMK G+FP S IK+GPASVAWLESEIDEWINLKLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

10) Pecwa_1687 in NC_013421


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 91.0 bits (326),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 54/62 (88%), Positives = 58/62 (94%), Gaps = 1/62 (1%)

Query  1   MTAHQLLRLKQVEVKTGLKRSQIYLYMKEGTFPSS-IKIGPASVAWLESEIDEWINFKLA  59
           MT+HQLLRLKQVE KTGLKRSQIYLYMK G+FP S IK+GPASVAWLESEIDEWIN+KLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

11) Rahaq2_1737 in NC_016818


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 90.7 bits (325),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 53/62 (86%), Positives = 57/62 (92%), Gaps = 1/62 (1%)

Query  1   MGPYQLLRLKQVEEKTGLKRSQIYLYMKGGTFPRS-IKIGPASVAWLESEIDEWINIKLV  59
           M + QLLRLKQVEEKTGLKRSQIYLYMKGG+FPRS IK+GPASVAWLESEIDEWIN+KL 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  RR  61
            R
Sbjct  61  NR  62

12) alpA in NC_014500


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 89.9 bits (322),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 55/62 (89%), Positives = 59/62 (96%), Gaps = 1/62 (1%)

Query  1   MTSHQLLRLRQVEEKTGLKRSQIYLYMKYGTFPAS-IKIGPASVAWLESEIDEWINFKLA  59
           MTSHQLLRL+QVEEKTGLKRSQIYLYMK G+FP S IK+GPASVAWLESEIDEWIN+KLA
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

13) CKO_00903 in NC_009792


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 89.1 bits (319),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 52/62 (84%), Positives = 58/62 (94%), Gaps = 1/62 (1%)

Query  1   MTSYQLLRLRQVEQKTGLKRSQIYLYMKEGAFPRS-IKIGPASVAWLESEIDEWINKKLS  59
           MTS QLLRL+QVE+KTGLKRSQIYLYMK G+FPRS IK+GPASVAWLESEIDEWIN KL+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  DR  61
           +R
Sbjct  61  NR  62

14) alpA2 in NC_012731


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 89.1 bits (319),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 52/62 (84%), Positives = 58/62 (94%), Gaps = 1/62 (1%)

Query  1   MTSYQLLRLRQVEQKTGLKRSQIYLYMKEGAFPRS-IKIGPASVAWLESEIDEWINKKLS  59
           MTS QLLRL+QVE+KTGLKRSQIYLYMK G+FPRS IK+GPASVAWLESEIDEWIN KL+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  DR  61
           +R
Sbjct  61  NR  62

15) YPDSF_1221 in NC_009381


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 89.1 bits (319),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 52/62 (84%), Positives = 58/62 (94%), Gaps = 1/62 (1%)

Query  1   MTSYQLLRLRQVEQKTGLKRSQIYLYMKEGAFPRS-IKIGPASVAWLESEIDEWINKKLS  59
           MTS QLLRL+QVE+KTGLKRSQIYLYMK G+FPRS IK+GPASVAWLESEIDEWIN KL+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  DR  61
           +R
Sbjct  61  NR  62

16) YPTS_1706 in NC_010634


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 89.1 bits (319),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 52/62 (84%), Positives = 58/62 (94%), Gaps = 1/62 (1%)

Query  1   MTSYQLLRLRQVEQKTGLKRSQIYLYMKEGAFPRS-IKIGPASVAWLESEIDEWINKKLS  59
           MTS QLLRL+QVE+KTGLKRSQIYLYMK G+FPRS IK+GPASVAWLESEIDEWIN KL+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  DR  61
           +R
Sbjct  61  NR  62

17) CKO_04347 in NC_009792


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 65.2 bits (228),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 34/53 (65%), Positives = 44/53 (84%), Gaps = 1/53 (1%)

Query  1   MVSHRFLRLRQVLDKIGLKRSQVYAYMKTGHFLKS-VRIGPASVVWLESEIDD  52
           M SH++LRL+QV +K GLKRSQ+Y YMK G F +S +++GPASV WLESEID+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDE  53

18) ASA_3077 in NC_009348


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 63.1 bits (220),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  7   RLLRIKDVISKVGLSKPTIYLRMKEGTFPRP-VSIGPKSVAWVEHEINDWLTAKISER  63
           +LLR+K+V  K GL ++ IYL MK G+FPR+ + +GP SVAW+E EI++W+  K+++R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

19) W5S_0465 in NC_017845


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 60.5 bits (210),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 47/62 (76%), Gaps = 1/62 (1%)

Query  1   MTDITLIRLSGVMKKTGLRKSWIYLLMKQGEFPQT-VKIGARSVAWVESEVNDWIAARIS  59
           MT   L+RL  V  KTGL++S IYL MK G FP++ +K+G+ SVAW+ESE+++WI  +++
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

20) Alide2_3071 in NC_015422


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  2   RILRLPAVSELTGLPRSTLYLYMSKGIFPKP-IKLGVKSVGWIQEEVDQWLRQKMESR  58
           ++LRL  V E TGL RS +YLYM  G FP++ IK+G  SV+W++ E+D+W+  K+ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

21) PSEBR_a2011 in NC_015379


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 44/60 (74%), Gaps = 1/60 (1%)

Query  14  ERRILRRSDVEQKTGIKRAHIYNLMSQGKFPKS-IRLGVRAVGWHAAEVDQWIAERLQDR  72
            +++LR  +VE+KTG+KR++IY  M  G FP+S I++G  +V+W  +E+D+WI  +L +R
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

22) Shewmr7_1777 in NC_008322


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  6   KLIRIKDVIDTTGLARSTIYKYVDKGIFPKA-VKLGSRSVAWVESEVQEWILERIAQR  62
           +L+R+K+V + TGL RS IY Y+  G FP++ +K+G+ SVAW+ESE++EWI  ++A+R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

23) Mpe_A2332 in NC_008825


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 27/61 (45%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  12  TEHRILRRAEVEAKTGFKRAHIYSLMKEGKFPKA-LRLGVRAVGWDSVEIEQWIAERLKE  70
           T H++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W   EI++WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  71  R  71
           R
Sbjct  62  R  62

24) alpa in NC_015740


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 27/61 (45%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  12  TEHRILRRAEVEAKTGFKRAHIYSLMKEGKFPKA-LRLGVRAVGWDSVEIEQWIAERLKE  70
           T H++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W   EI++WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  71  R  71
           R
Sbjct  62  R  62

25) A1122_19325 in NC_017168


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MSDINLIRLPEVIEKIRLKKSSIYHLISLNQFPRPI-KLGPRSVAWVESEVDEWVIIRIN  59
           M+  +L+RL +V EK  LK+S IY  +    FPR+I K+GP SVAW+ESE+DEW+ +++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

26) YpAngola_A1363 in NC_010159


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MSDINLIRLPEVIEKIRLKKSSIYHLISLNQFPRPI-KLGPRSVAWVESEVDEWVIIRIN  59
           M+  +L+RL +V EK  LK+S IY  +    FPR+I K+GP SVAW+ESE+DEW+ +++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

27) YPA_0571 in NC_008150


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MSDINLIRLPEVIEKIRLKKSSIYHLISLNQFPRPI-KLGPRSVAWVESEVDEWVIIRIN  59
           M+  +L+RL +V EK  LK+S IY  +    FPR+I K+GP SVAW+ESE+DEW+ +++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

28) YPC_1143 in NC_017265


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MSDINLIRLPEVIEKIRLKKSSIYHLISLNQFPRPI-KLGPRSVAWVESEVDEWVIIRIN  59
           M+  +L+RL +V EK  LK+S IY  +    FPR+I K+GP SVAW+ESE+DEW+ +++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

29) alpA1 in NC_005810


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MSDINLIRLPEVIEKIRLKKSSIYHLISLNQFPRPI-KLGPRSVAWVESEVDEWVIIRIN  59
           M+  +L+RL +V EK  LK+S IY  +    FPR+I K+GP SVAW+ESE+DEW+ +++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

30) YPN_2905 in NC_008149


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MSDINLIRLPEVIEKIRLKKSSIYHLISLNQFPRPI-KLGPRSVAWVESEVDEWVIIRIN  59
           M+  +L+RL +V EK  LK+S IY  +    FPR+I K+GP SVAW+ESE+DEW+ +++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

31) YPDSF_2604 in NC_009381


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MSDINLIRLPEVIEKIRLKKSSIYHLISLNQFPRPI-KLGPRSVAWVESEVDEWVIIRIN  59
           M+  +L+RL +V EK  LK+S IY  +    FPR+I K+GP SVAW+ESE+DEW+ +++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  QR  61
           +R
Sbjct  61  NR  62

32) Fraau_1984 in NC_017033


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 26/57 (46%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  13  RLIRIAEVERTTGLKRASIYRHMAAGTFP-ASIKLSPACTAWSEAEVQAWIAQRIAA  68
           +L+R+ +VE  TGLKR+ IY  M +G+FP + IK++PA  AW E+E++ WI  ++A 
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

33) alpA3 in NC_010170


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 45/61 (74%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMRAGKFPQA-LRLGVRAVGWDSVEIDQWIAERLNN  68
             +++LRL +VE K+G+KR++IY  M++G FP++ +++G  +V+W   EID+WI  +L N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

34) Bxe_A1231 in NC_007951


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 45/61 (74%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMRAGKFPQA-LRLGVRAVGWDSVEIDQWIAERLNN  68
             +++LRL +VE K+G+KR++IY  M++G FP++ +++G  +V+W   EID+WI  +L N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

35) Rpic12D_0635 in NC_012856


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  12  TEHRILRRAEVEAKTGFKRAHIYSLMKEGKFPKA-LRLGVRAVGWDSMEVEQWIADRLNE  70
           T H++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W   E+++WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  71  R  71
           R
Sbjct  62  R  62

36) Fraau_3057 in NC_017033


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 56.1 bits (193),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 25/60 (42%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query  11  PAARLIRIAEVERTTGLKRPTIYRHMAAGTFP-ASIKLSPSCTAWSEAEVQAWIAQRIAA  69
            + +L+R+ +VE  TGLKR+ IY  M +G+FP + IK++P+  AW E+E++ WI  ++A 
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

37) VV2250 in NC_005139


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  17  RFLKLKEVMEKTALSRSAIYRKMNDGEFPES-VSLGERAIAWVESEVDEWMEMRLERR  73
           ++L+LK+V EKT+L RS IY  M++G FP S + +G  ++AW+ESE+DEW++++L  R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

38) alpa in NC_015740


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 47/62 (76%), Gaps = 1/62 (1%)

Query  9   IADRRILRRAEVEAKTGFKRAHIYNLMKDGKFPKA-LRLGIRAVGWDSAEIDQWITERLQ  67
           ++ +++LR  +VE KTG+KR++IY  MK+G FP++ +++G  +V+W  +EID+WI  +L 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  68  ER  69
           +R
Sbjct  61  NR  62

39) Marme_2105 in NC_015276


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  2   RVMKLNEVINTTGLSRSSIYAYMSKGNFPKP-IQLGPRAVAWIEEEVHKWLCDKISQR  58
           ++++L++V + TGL RS IY YM  G+FP++ I++GP +VAW+E E++ W+  K+++R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

40) Alide_2723 in NC_014910


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  12  PEHRILRRTEVEVKTGFKRAHIYSLMKEGKFPKA-LRLGVRAVGWDSVEIEQWIADRLNE  70
             H++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W   EI++WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  71  R  71
           R
Sbjct  62  R  62

41) Alide2_1737 in NC_015422


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  12  PEHRILRRAEVEAKTGFKRAHIYSLMKEGKFPKA-LRLGVRAVGWDSVEIEQWIADRLKE  70
             H++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W   EI++WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  71  R  71
           R
Sbjct  62  R  62

42) Tmz1t_1000 in NC_011662


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  12  PEHRILRRAEVEAKTGFKRAHIYSLMKEGKFPKA-LRLGVRAVGWDSVEIEQWIADRLKE  70
             H++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W   EI++WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  71  R  71
           R
Sbjct  62  R  62

43) SVI_1340 in NC_014012


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.0 bits (189),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 27/58 (47%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  2   RLIKLHEVMSSTGLARSTIYKYLEEGCFPKS-VSLGARAVAWVESEVQEWILSKIEER  58
           +L++L +V   TGL RS IY Y+  G FP+S + +G+ +VAW+ESE++EWI  K+ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

44) A458_06100 in NC_018028


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 55.0 bits (189),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  12  PEHRVLRRAEVEAKTGFKRAHIYSLMKEGKFPKA-LRLGVRAVGWDSVEIEQWIADRLKE  70
             H++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W   EI++WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  71  R  71
           R
Sbjct  62  R  62

45) Neut_0125 in NC_008344


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.7 bits (188),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 27/61 (45%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  10  GERRILRREEVEAKTGFKRAHIYNLMKKGQFPKA-LRLGVRAVGWDSTEIDQWITERLNN  68
             +++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W  +EID+WI  +L N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

46) Pecwa_1667 in NC_013421


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.7 bits (188),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  9   VPERRILRRAEVEAKTGFKRAHIYNLMKEGKFPKA-LRLGVRAVGWDSAEIDQWITDRLK  67
           +  +++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W  +EID+WI  +L 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  68  ER  69
           +R
Sbjct  61  NR  62

47) I636_19330 in NC_021714


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 27/52 (52%), Positives = 39/52 (75%), Gaps = 1/52 (1%)

Query  1   MRLPEVKAKTGFGRSTIYALMANGEFPRS-IRIGARAVGWLESDIDQWIETR  51
           +RL +V  KTG+ RS IY  M  G FPRS I++G+ +V+WLES+ID+WI+ +
Sbjct  7   LRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLK  58

48) alpA1 in NC_012962


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 32/62 (52%), Positives = 43/62 (70%), Gaps = 1/62 (1%)

Query  1   MAETTLIRLADVMKKVGLKKSWIYHLMQQGEFPKS-VSLGARSVAWVEKEIDEWIINKIN  59
           M+   L+RL +V  K GLK+S IY  M+ G FP+S + +G+ SVAW+E EIDEWI  K+ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

49) alpA1 in NC_012962


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 32/62 (52%), Positives = 43/62 (70%), Gaps = 1/62 (1%)

Query  1   MAETTLIRLADVMKKVGLKKSWIYHLMQQGEFPKS-VSLGARSVAWVEKEIDEWIINKIN  59
           M+   L+RL +V  K GLK+S IY  M+ G FP+S + +G+ SVAW+E EIDEWI  K+ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  60  NR  61
           NR
Sbjct  61  NR  62

50) VS_1654 in NC_011753


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 27/58 (47%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  12  RFLKLKEVIEKTALSRSAIYRKMDEGNFPVS-VSLGDRAVAWVEEEVNNWMEMRLAER  68
           ++L+LK+V EKT+L RS IY  M  G+FP S + +G  +VAW+E E+++W++++LA+R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

51) Tgr7_2812 in NC_011901


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 26/59 (45%), Positives = 44/59 (75%), Gaps = 1/59 (1%)

Query  14  RRILRRAEVEAKTGFKRAHIYSLMKEGRFPKA-LRLGVRAVGWDSTEIDQWIADRLKER  71
           +++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W  +EID+WI  +L +R
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

52) Bpet1289 in NC_010170


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  10  PERRILRRAEVEAKTGFKRAHIYSLMKEGKFPKA-MRLGVRAVGWDSAEIDQWITDRLKE  68
             +++LR  +VE KTG+KR++IY  MK G FP++ +++G  +V+W  +EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

53) Sbal223_0381 in NC_011663


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 54.0 bits (185),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 27/58 (47%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  2   KLIKLKDVIASTGLGRSTIYKYIENGIFPKA-VSLGCRSVAWVESEIQDWILARIEER  58
           +L++LK+V   TGL RS IY Y+  G FP++ + +G  SVAW+ESEI++WI  ++ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

54) Tola_2395 in NC_012691


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.7 bits (184),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 28/61 (46%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  10  GERRILRLDEVEAKSGFKRAHIYSLMKKGEFPQS-LRLGVRAVGWDSTEIDLWITERLKN  68
             +++LRL +VE K+G+KR++IY  MK G FP+S +++G  +V+W  +EID WI  +L N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

55) O3Y_08640 in NC_016944


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  68
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

56) VCM66_1723 in NC_012578


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  68
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

57) VCD_002586 in NC_012668


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  68
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

58) VC1785 in NC_002505


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  68
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

59) VC395_1899 in NC_012582


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  68
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

60) VC0395_A1382 in NC_009457


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  12  RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  68
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

61) Bxe_C0412 in NC_007953


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 24/54 (45%), Positives = 38/54 (71%), Gaps = 1/54 (1%)

Query  14  RLIRLREVRTRVGLGASTVYRYLAAGKFPRP-VEIGGGRVAWVESEIDAWIASR  66
           +L+RL++V  + GL  S +Y Y+ +G FPR+ + +G + VAW+ESEID WI  +
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLK  58

62) FTN_0015 in NC_008601


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  2   KILRLKQVVEMTGTSKTTIYRWINANQFPKPI-NLSHASVGWLEADINDWIQSKIQAR  58
           ++LRLKQV E TG  ++ IY  +++  FP++I +++ ASV+WLE++I++WI+ K+  R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

63) Fphi_1927 in NC_010336


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  2   KILRLKQVVEMTGTSKTTIYRWINANQFPKPI-NLSHASVGWLEADINDWIQSKIQAR  58
           ++LRLKQV E TG  ++ IY  +++  FP++I +++ ASV+WLE++I++WI+ K+  R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

64) ebD61 in NC_006513


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 26/61 (43%), Positives = 45/61 (74%), Gaps = 1/61 (1%)

Query  10  GERRILRLDEVEAKSGFKRAHIYSLMKKGEFPQA-LRLGVRAVGWDSTEVDLWISERLKN  68
             +++LRL +VE K+G+KR++IY  MK G FP++ +++G  +V+W  +E+D WI+ +L N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

65) Dd1591_0481 in NC_012912


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 26/62 (42%), Positives = 44/62 (71%), Gaps = 1/62 (1%)

Query  9   VPERRILRRAEVEAKTGFKRAHIYNLMKEGKFPKA-LHLGVRAVGWDSAEIDQWITDRLK  67
           +  +++LR  +VE KTG+KR++IY  MK G FP++ + +G  +V+W  +EID+WI  +L 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  68  ER  69
           +R
Sbjct  61  NR  62

66) VCLMA_A1546 in NC_017270


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.2 bits (182),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  2   RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  58
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

67) Vch1786_I1278 in NC_016445


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.2 bits (182),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 46/58 (80%), Gaps = 1/58 (1%)

Query  2   RFLKLKEVMEKTALSRSAIYRKMNDGEFPQS-VSLGERAIAWVESEVDEWMDFCLKQR  58
           ++L+LK+V EKT+L RS IY  M++G FP+S + +G  ++AW+ESE+DEW+++ L +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

68) B479_23190 in NC_019905


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.2 bits (182),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  10  RVIRLKTVVEITGLARSTVYSYIAKGIFPKS-ISLGGRCVGWVESEVHTWIQARVTER  66
           +++RLK V E TGL RS +Y Y+  G FP+S I +G   V+W+ESE++ WI+ ++++R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

69) PPS_2374 in NC_015733


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.2 bits (182),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 43/58 (75%), Gaps = 1/58 (1%)

Query  20  DRHIMRRDEVEQKTGFKRSHIYNLMKAGQFPKC-RRIGTRAVGWDSLEIEQWIQDRLS  76
            ++++R  +VE+KTG+KRS+IY  MK+G FP+   ++G  +V+W   EI++WI+ +L+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

70) Shewmr4_2784 in NC_008321


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 53.2 bits (182),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 43/59 (73%), Gaps = 1/59 (1%)

Query  2   SNKIMRLPEVKSRTGLSRSSIYLRISKGEFP-ASISLGDRAVGWLEADIEQWLDERIAA  59
           S++++RL +V  +TGL RS IYL +  G FP + I +G  +V+WLE++I++W++ ++A 
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

71) PCNPT3_08010 in NC_020802


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.9 bits (181),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 24/51 (48%), Positives = 39/51 (77%), Gaps = 1/51 (1%)

Query  2   KFIRLKDVIAKTGLARATIYKFMANDKFPKT-ISLGDRAVAWLDSDVDEWM  51
           +++RLK+V  KTGL R+ IY +M  + FP++ I +G  +VAWL+S++DEW+
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

72) VV0810 in NC_005139


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.9 bits (181),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  2   RFLKLKEVMEKTALSRSAIYRKMSDGEFPQS-VSLGDRAVAWVESEVQDWVIDKVAER  58
           ++L+LK+V EKT+L RS IY  M +G FP+S + +G  +VAW+ESE+++W+  K+A+R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

73) YE105_C2856 in NC_015224


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.9 bits (181),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 29/60 (49%), Positives = 45/60 (75%), Gaps = 1/60 (1%)

Query  2   AKRLIRLPDVMSITGLKRSTIYFKMKEGNFPNN-IPIGERSVAWVEGEVINWINGNISKR  60
           + +L+RL +V   TGLKRS IY+ MK G+FP + I +G  SVAW+E+E+ +WIN ++++R
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

74) PputGB1_4755 in NC_010322


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 43/58 (75%), Gaps = 1/58 (1%)

Query  2   KVIRLQQVMEMTGLGRSTVYKYVSGNWFPKP-IPLGGRSVGWLESEVNEWILDRIEER  58
           +++RL+QV E TGL RS +Y Y+ G  FP++ I +G  SV+WLESE++EWI  ++ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

75) BTI_2164 in NC_021173


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 28/62 (46%), Positives = 43/62 (70%), Gaps = 1/62 (1%)

Query  14  LVEHCILRRKDVERRTGFKRSHIYNLMHQGKFPRA-IPLGARAVGWDSREIDQWIEERKQ  72
           +  H +LR K+VE +TG+KRS+IY  M  G FPR+ I +G+ +V+W   EID+WI+ +  
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  73  QR  74
           +R
Sbjct  61  NR  62

76) Despr_0272 in NC_014972


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 41/60 (69%), Gaps = 1/60 (1%)

Query  6   PPKTLLRRPDVEKRTGLKRAHIYALMKQGEFPQAVPLAGRA-VAWISDEIDNWISGRIQQ  64
            +  LLR  +VE +TGLKR++IY  MK G FP+++   G A VAW+  EID+WI+ ++ +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

77) XC_2072 in NC_007086


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  14  ERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSVEIDQWIAERLNNR  72
            +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

78) xccb100_2403 in NC_010688


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  14  ERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSVEIDQWIAERLNNR  72
            +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

79) XCAW_01643 in NC_020815


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  11  ERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSVEIDQWIAERLNNR  69
            +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

80) NH44784_010881 in NC_021285


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  11  ERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSVEIDQWIAERLNNR  69
            +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

81) HEAR1968 in NC_009138


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  11  ERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSVEIDQWIAERLNNR  69
            +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

82) Plav_3376 in NC_009719


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  11  ERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSVEIDQWIAERLNNR  69
            +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

83) NH44784_010091 in NC_021285


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

84) Ajs_1320 in NC_008782


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

85) Alide_3995 in NC_014910


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

86) alpA1 in NC_010170


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

87) alpA in NC_007973


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

88) PADK2_12295 in NC_018080


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

89) PLES_27091 in NC_011770


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

90) SMD_1576 in NC_017671


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

91) TMO_c0096 in NC_017958


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERLNH  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

92) AXYL_01049 in NC_014640


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 26/60 (44%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  11  ERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSVEIDQWIAERLNNR  69
            +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  +L NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

93) M636_02800 in NC_021822


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  2   RFLKLKEVIEKTALSRSAIYRKMSEDAFPKS-VNLGDRAVAWVESEVDDWMAKVLVNR  58
           ++L+LK+V EKT+L RS IY  M  ++FP+S +++G  +VAW+ESE+D+W+   L NR
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

94) Spea_1260 in NC_009901


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 27/58 (47%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  2   KLIRLKDVIACTGLARSTIYKYIEEGIFPKS-VSLGDRAVAWVENEVQEWILERIEER  58
           +L+RLK+V   TGL RS IY Y+  G FP+S + +G  +VAW+E+E++EWI  ++ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

95) Sputcn32_3522 in NC_009438


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 43/58 (75%), Gaps = 1/58 (1%)

Query  2   KLIRLTKVMDYTGLARSTIYKYIAEGTFPKP-VSLGSRAAAWVESEVQEWILTRIEER  58
           +L+RL +V + TGL RS IY Y+  G+FP++ + +G+ + AW+ESE++EWI  ++ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

96) alpA2 in NC_010170


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  10  NERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIDERVNN  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI+ ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

97) Daci_4141 in NC_010002


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  10  NERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIDERVNN  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI+ ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

98) NCGM2_1450 in NC_017549


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  10  NERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIDERVNN  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI+ ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

99) alpA in NC_017532


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  10  NERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIDERVNN  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI+ ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

100) NAL212_2044 in NC_015222


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.9 bits (177),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 27/58 (47%), Positives = 41/58 (71%), Gaps = 1/58 (1%)

Query  2   KFVKLETVKSMTGLSRSSIYQYINEGRFPNQ-VRLGSRSVAWVASEVDEWMNSCIANR  58
           ++++L  V   TGL RS IY Y++ G FP   +++G+ SVAW+ SE+DEW+N  +ANR
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

101) FN3523_0015 in NC_017449


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.9 bits (177),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 43/58 (75%), Gaps = 1/58 (1%)

Query  4   KILRLSQVVEMTGTSKSTIYRWINANQFPKPI-NLSHASVGWLEADINDWIQSKIQAR  60
           ++LRL QV E TG  +S IY  +++  FP++I +++ ASV+WLE++I++WI+ K+  R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

102) Bpet2882 in NC_010170


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 41/58 (71%), Gaps = 1/58 (1%)

Query  6   QILRITDVTRITGLSRPAIYYNVKRGLFPRQ-IQLGPRSVGWLASDVEAWFQSRISAR  62
           Q+LR+ +V   TGL R+ IY  +K G FPR  I++GP SV+WL S+++ W++ +++ R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

103) NH44784_008971 in NC_021285


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERVNN  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

104) Ajs_1454 in NC_008782


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLDEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERVNN  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

105) XCV2415 in NC_007508


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  10  NERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERVNN  68
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  69  R  69
           R
Sbjct  62  R  62

106) XF1786 in NC_002488


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.6 bits (176),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 25/61 (41%), Positives = 43/61 (71%), Gaps = 1/61 (1%)

Query  13  NERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQA-LRLGVRAVGWDSIEIDQWIAERVNN  71
             +++LRL +VE K+G+KR++IY  MK   FP++ +++G  +V+W   EID+WI  ++ N
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  72  R  72
           R
Sbjct  62  R  62

107) Dda3937_01305 in NC_014500


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 46/62 (75%), Gaps = 1/62 (1%)

Query  2   MSNLTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPV-KLGARSVAWVESEINDWIAERIR  60
           M++  LLRL +V  KT+LK+S IY  +  G FP+++ K+G+ SVAW+ESEI++WI  ++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  61  QR  62
           +R
Sbjct  61  NR  62

108) Dd586_3773 in NC_013592


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 46/62 (75%), Gaps = 1/62 (1%)

Query  2   MSNLTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPV-KLGARSVAWVESEINDWIAERIR  60
           M++  LLRL +V  KT+LK+S IY  +  G FP+++ K+G+ SVAW+ESEI++WI  ++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  61  QR  62
           +R
Sbjct  61  NR  62

109) Dd703_3550 in NC_012880


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 46/62 (75%), Gaps = 1/62 (1%)

Query  2   MSNLTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPV-KLGARSVAWVESEINDWIAERIR  60
           M++  LLRL +V  KT+LK+S IY  +  G FP+++ K+G+ SVAW+ESEI++WI  ++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  61  QR  62
           +R
Sbjct  61  NR  62

110) Dd1591_3697 in NC_012912


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 46/62 (75%), Gaps = 1/62 (1%)

Query  2   MSNLTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPV-KLGARSVAWVESEINDWIAERIR  60
           M++  LLRL +V  KT+LK+S IY  +  G FP+++ K+G+ SVAW+ESEI++WI  ++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  61  QR  62
           +R
Sbjct  61  NR  62

111) Dd1591_3709 in NC_012912


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.3 bits (175),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 46/62 (75%), Gaps = 1/62 (1%)

Query  2   MSNLTLLRLPDVMKKTSLKKSWIYYLIDRGEFPQPV-KLGARSVAWVESEINDWIAERIR  60
           M++  LLRL +V  KT+LK+S IY  +  G FP+++ K+G+ SVAW+ESEI++WI  ++ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  61  QR  62
           +R
Sbjct  61  NR  62

112) Pmen_1159 in NC_009439


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.3 bits (175),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  2   RIIRLKEVTHLTGLARSTVYKYLAEGKFPKS-VSLGHRSIGFLESEIQEWIMARIKER  58
           +++RLK+V + TGL RS +Y Y+  G FP+S + +G  S++ LESEI+EWI  ++ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

113) Thivi_2364 in NC_018012


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 51.1 bits (174),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  9   ATARILRLPEVAARIGMSRSSVYLLMNRGQFPKS-VKLSLRAVGWRESEIDEWANSR  64
           ++ ++LRL +V  + G+ RS +YL M+ G FP+S +K++  +V+W ESEIDEW N +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLK  58

114) Fphi_1931 in NC_010336


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 50.8 bits (173),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 40/58 (69%), Gaps = 1/58 (1%)

Query  3   KIIRLKTVIEMTGLSRSTIYDYMARGLFPRQIT-LGENSRGWLYSEVDEWLETRIQKR  59
           +++RLK V E TGL RS IY YM  G FPR I  +G  S +WL SE+DEW++ ++ +R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

115) VEA_004310 in NC_013456


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 50.5 bits (172),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 26/54 (49%), Positives = 38/54 (71%), Gaps = 1/54 (1%)

Query  2   SHKIIRLPEVIDMTGLSRSTIYLRMSQGSFPLS-ISLGERAVGWLKVDIEKWLD  54
           SH+++RL +V + TGL RS IYL M  GSFP S I +G  +V+WL  +I+ W++
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

116) Shewmr4_1700 in NC_008321


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 50.0 bits (170),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 27/56 (49%), Positives = 42/56 (75%), Gaps = 2/56 (3%)

Query  1   MTPNIKLIRIKDVIDTTGLARSTIYKYVDKGIFPKA-VTLGLRAVAWVESEIQGWI  55
           MT++ +L+R+K+V + TGL RS IY Y+  G FP++ + +G  +VAW+ESEI+ WI
Sbjct  1   MTSH-QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

117) N175_11480 in NC_022223


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 50.0 bits (170),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 28/59 (48%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  2   RFLRLKEVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMESRLSMR  59
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +L+ R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

118) VAA_01228 in NC_015633


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 50.0 bits (170),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 28/59 (48%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  2   RFLRLKEVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMESRLSMR  59
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +L+ R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

119) O3Y_02325 in NC_016944


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 28/59 (48%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  2   RFLRLKDVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMESRLSMR  59
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +L+ R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

120) VCD_001110 in NC_012668


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 28/59 (48%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  2   RFLRLKDVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMESRLSMR  59
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +L+ R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

121) VC0497 in NC_002505


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 28/59 (48%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  2   RFLRLKDVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMESRLSMR  59
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +L+ R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

122) Hhal_1156 in NC_008789


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 41/56 (74%), Gaps = 1/56 (1%)

Query  10  KPNERLLRINSVIKRVGLGRSTIYKKVKEGGFPKP-IKLGERAIAWRESDIEEWIS  64
             +++LLR++ V  + GL RS IY  +K G+FP++ IK+G  ++AW ES+I+EWI+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

123) SEEH1578_21295 in NC_021810


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  13  SYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQ-VSIGSRSVAWVEHEVNEWIEKNILNR  71
           S +LLR+ +V + TGL +S IYL +K + FP   + +G+ SVAW+E E++EWI+ ++ NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

124) SU5_02999 in NC_017623


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  13  SYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQ-VSIGSRSVAWVEHEVNEWIEKNILNR  71
           S +LLR+ +V + TGL +S IYL +K + FP   + +G+ SVAW+E E++EWI+ ++ NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

125) CFSAN002069_19815 in NC_021812


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.8 bits (169),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 43/60 (72%), Gaps = 1/60 (1%)

Query  13  SYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQ-VSIGSRSVAWVEHEVNEWIEKNILNR  71
           S +LLR+ +V + TGL +S IYL +K + FP   + +G+ SVAW+E E++EWI+ ++ NR
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

126) vfu_A00206 in NC_016602


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 29/59 (50%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  4   KFLRLKDVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMEQRLALR  61
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +LA R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

127) VPBB_0171 in NC_019955


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 29/59 (50%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  2   RFLRLKDVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMEQRLALR  59
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +LA R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

128) VV0515 in NC_005139


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 29/59 (50%), Positives = 44/59 (75%), Gaps = 2/59 (3%)

Query  4   KFLRLKDVMSLTGLGRSTIYKFMADETDFPKSV-PLGGRAVAWVESEIEEWMEQRLALR  61
           ++LRLK+V   TGL RS IY +M + + FP+S+  +G  +VAW+ESEI+EW++ +LA R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS-FPRSIIKVGPASVAWLESEIDEWINLKLANR  62

129) K734_03205 in NC_021286


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 41/58 (71%), Gaps = 1/58 (1%)

Query  2   KLMKVKEVMHVTSLARPTIYKYMAKGQFPKP-VSLGGRAVAWVADEIDDWIMQCIAER  58
           +L+++K+V + T+L R+ IY YM  G FP++ + +G  +VAW+  EID+WI   +A+R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

130) IL0640 in NC_006512


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 41/58 (71%), Gaps = 1/58 (1%)

Query  2   KLMKVKEVMHVTSLARPTIYKYMAKGQFPKP-VSLGGRAVAWVADEIDDWIMQCIAER  58
           +L+++K+V + T+L R+ IY YM  G FP++ + +G  +VAW+  EID+WI   +A+R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

131) ECSF_2233 in NC_013654


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.2 bits (167),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  15  RLLRISEVINLTGLPKSTIYLKIKNDEFPNQV-SIGSRSVAWVEHEVNEWIEKNILNR  71
           +LLR+ +V + TGL +S IYL +K + FP  +  +G+ SVAW+E E++EWI+ ++ NR
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

132) Maqu_0653 in NC_008740


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.2 bits (167),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 40/58 (69%), Gaps = 1/58 (1%)

Query  16  DRMLRRKEVEAITGRSRSAIYEGMAAGTFPKP-VKIGARAVAWPESAIRNWIAERMEG  72
           +++LR K+VE  TG  RS IY  M +G+FP++ +K+G+ +VAW ES I +WI  ++  
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

133) H681_23115 in NC_020829


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.2 bits (167),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 24/55 (44%), Positives = 39/55 (71%), Gaps = 1/55 (1%)

Query  6   TVDRLMRLEEVLHTTGLGRNTVYRRMREGIFPRQ-VRLGPNSVAWRQSDIARWVE  59
           T ++L+RL +V + TGL R+ +Y  M+ G FPR  +++GP SVAW +S+I  W++
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

134) AHML_05600 in NC_021290


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.0 bits (166),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 25/52 (49%), Positives = 39/52 (75%), Gaps = 1/52 (1%)

Query  2   KLLKLKDVIAMTSLSKASVYRQMNDGKFPASV-KIGPRSVAWVSSEIELWIE  52
           +LL+LK+V   T+L ++ +Y  M++G FP S+ K+GP SVAW+ SEI+ WI+
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

135) N646_2021 in NC_022349


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 49.0 bits (166),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 27/58 (47%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  2   RLIRLKEVLDNTGLSRAYMYKLMAEGKFPKS-VSLGFRSVAWVESEVQDWILERVAER  58
           +L+RLK+V ++TGL R+ +Y  M  G FP+S + +G  SVAW+ESE+++WI  ++A+R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

136) BTI_1089 in NC_021173


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 24/54 (45%), Positives = 38/54 (71%), Gaps = 1/54 (1%)

Query  8   PQTLMRRKQVEVETTLARSTIYDRMKAGTFPKA-IRIGARSIVWRRADIDAWLA  60
           ++ L+R KQVE  T L RS IY  MK+G+FP++ I++G+ S+ W  ++ID W+ 
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

137) CKO_03476 in NC_009792


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 48.4 bits (164),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 26/59 (45%), Positives = 44/59 (75%), Gaps = 1/59 (1%)

Query  3   MNSDRFLRLRQVEDKIGFGKSWIYRQIQLQQFP-PFIRLNSRHVAWLESEVDAWIHQRI  60
           M S+++LRL+QVE+K G+ +S IY  ++   FP ++I++ +  VAWLESE+D WI+ ++
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

138) Aave_0567 in NC_008752


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 48.4 bits (164),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  17  TSRRVLRRPLVEQRTGFKRAHIYSLMKEKKFPQR-VRLGVRAVGWYEDEIDQWLAQR  72
           TS+++LR   VE++TG+KR++IY  MK   FP+  +++G  +V+W E EID+W+  +
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLK  58

139) A79E_4453 in NC_018522


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 48.2 bits (163),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 27/59 (46%), Positives = 43/59 (73%), Gaps = 1/59 (1%)

Query  1   MNSDRFLRLRQVEDKIGFGKSWIYRQIQLQQFPPS-IRLNSRHVAWLESEVDAWIHQRI  58
           M S+++LRL+QVE+K G+ +S IY  ++   FP S I++ +  VAWLESE+D WI+ ++
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

140) A464_4539 in NC_021870


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 48.2 bits (163),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 27/59 (46%), Positives = 43/59 (73%), Gaps = 1/59 (1%)

Query  1   MNSDRFLRLRQVEDKIGFGKSWIYRQIQLQQFPPS-IRLNSRHVAWLESEVDAWIHQRI  58
           M S+++LRL+QVE+K G+ +S IY  ++   FP S I++ +  VAWLESE+D WI+ ++
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

141) Pput_3427 in NC_009512


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 48.2 bits (163),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 39/53 (74%), Gaps = 1/53 (1%)

Query  8   DRLLRLPDVLRITGMGRNTVYTRIKEGTFPKQ-VKIGPKSVAWRQSDINQWMA  59
           ++LLRL +V   TG+ R+ +Y  +K G+FP+  +K+GP SVAW +S+I++W+ 
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

142) Sbal223_0384 in NC_011663


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 48.2 bits (163),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  2   KLIRQKEVMDCTGLGRSTIYNYIADKTFPKP-VSLGLRAVAWVESEVQDWILERIEAR  58
           +L+R K+V + TGL RS IY Y+ + +FP++ + +G  +VAW+ESE+++WI  ++  R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

143) NH8B_1936 in NC_016002


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 28/55 (51%), Positives = 39/55 (71%), Gaps = 2/55 (3%)

Query  2   QLLTLKEVESKLGLKKTKIYLMIDKNEFPPP-IKIGAAS-RWAENIVDEWIANRL  54
           QLL LK+VE K GLK+++IYL +    FP + IK+G+AS  W E+ +DEWI  +L
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

144) KPN_04704 in NC_009648


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 27/59 (46%), Positives = 43/59 (73%), Gaps = 1/59 (1%)

Query  3   MNSDRFLRLRQVEDKIGFGKSWIYRQIQLQQFPPS-IRLNSRHVAWLESEVDAWIHQRI  60
           M S+++LRL+QVE+K G+ +S IY  ++   FP S I++ +  VAWLESE+D WI+ ++
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

145) KP1_0641 in NC_012731


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 27/59 (46%), Positives = 43/59 (73%), Gaps = 1/59 (1%)

Query  3   MNSDRFLRLRQVEDKIGFGKSWIYRQIQLQQFPPS-IRLNSRHVAWLESEVDAWIHQRI  60
           M S+++LRL+QVE+K G+ +S IY  ++   FP S I++ +  VAWLESE+D WI+ ++
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

146) Bphy_3413 in NC_010623


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 23/52 (45%), Positives = 37/52 (72%), Gaps = 1/52 (1%)

Query  5   ERLLRMPEVVRRTGMSSTTVYRRISDGTFPRP-VSLGCNRVAWLESEIDAWI  55
           ++LLR+ +V  +TG+  + +Y  + +G+FPR+ + +G   VAWLESEID WI
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

147) M636_22650 in NC_021848


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  2   RLIRLQEVLDNTGLSRAYMYKLMAEGKFPKS-VSLGFRSVAWVESEVQDWILERVAER  58
           +L+RL++V ++TGL R+ +Y  M  G FP+S + +G  SVAW+ESE+++WI  ++A+R
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

148) Rpic12D_3120 in NC_012856


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 40/62 (65%), Gaps = 1/62 (1%)

Query  24  MLAERFMRLPEVSATCGLPTSSIYDGMRRGDFPKPVPLTG-KTVAWLASEIHEWMASRVA  82
           M +++++RL +V    GL  S IY  M+ G FP+++   G  +VAWL SEI+EW+  ++A
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  83  AR  84
            R
Sbjct  61  NR  62

149) CV_0648 in NC_005085


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.4 bits (160),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 29/64 (46%), Positives = 41/64 (65%), Gaps = 3/64 (4%)

Query  8   LTAQPLRFLRLPEVISTCGLSRSSVYDAIKRGSFPAPV-PLGGKSVAWLSSEIDVWMAGR  66
           +T++ L  LRL +V    GL RS +Y  +K GSFP ++  +G  SVAWL SEID W+  +
Sbjct  1   MTSHQL--LRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLK  58

Query  67  IAAR  70
           +A R
Sbjct  59  LANR  62

150) Mesci_3844 in NC_014923


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.4 bits (160),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 27/61 (45%), Positives = 44/61 (73%), Gaps = 1/61 (1%)

Query  3   TTNTFIRRPDVERLTGLKTSSLYEQMKEGNFPRP-IKIGAKAVAWRLADVTEWQERKIAQ  61
           T++ ++R  +VE  TGLK S +Y  MK G+FPR+ IK+G+ +VAW  +++ EW + K+A+
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

Query  62  R  62
           R
Sbjct  62  R  62

151) PSF113_3346 in NC_016830


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.1 bits (159),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 23/55 (42%), Positives = 39/55 (71%), Gaps = 1/55 (1%)

Query  1   MRREEVEQKTGFKRAHIYSLMKEGKFPQA-KRIGLRAVGWDSMEIERWVTDRLAQ  54
           +R  +VE+KTG+KR++IY  MK G FP++  ++G  +V+W   EI+ W+  +LA+
Sbjct  7   LRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

152) ETAC_13010 in NC_020796


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.1 bits (159),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 26/59 (45%), Positives = 44/59 (75%), Gaps = 1/59 (1%)

Query  2   SQSLIRLSEVQRRTGYSKAWIYRLLKENRFPQS-IKIGSRSIAFVESEVDDWINQRIAE  59
           S+ L+RL +V+ +TG  ++ IY  +K   FP+S IK+G+ S+A +ESE+D+WIN ++A+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

153) Nit79A3_1498 in NC_015731


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 47.1 bits (159),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 40/58 (69%), Gaps = 1/58 (1%)

Query  2   KFVKLETVKSMTGLSRSSIYQLINEGRFPNQV-NLGSRSVAWVASEIEDWMNNCIANR  58
           ++++L  V   TGL RS IY  ++ G FP  + ++G+ SVAW+ SEI++W+N  +ANR
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

154) UWK_00658 in NC_020304


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 46.9 bits (158),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 27/52 (52%), Positives = 38/52 (74%), Gaps = 1/52 (1%)

Query  12  RLLRRPEVEAVTGLKRSTIYARIKMGTFPAP-VQLGPKSVAWKSSDIQSWIE  62
           +LLR  +VE  TGLKRS IY  +K G+FP + +++GP SVAW  S+I+ WI+
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

155) NT08PM_0296 in NC_017764


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 46.6 bits (157),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  8   ERFINLDEVINRTSLKKTAIYSLIQKGLFPRPI-NLGINRTAWLESEIDHWIASKIQQ  64
           ++++ L +V ++T+LK++ IY  ++ G FPR+I ++G    AWLESEID+WI  K+ +
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

156) EC55989_0270 in NC_011748


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 46.1 bits (155),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 26/59 (45%), Positives = 43/59 (73%), Gaps = 1/59 (1%)

Query  2   SNTLIRLTEVQRRTGYSKAWIYRLMGQGKFP-ASVKIGSRAIAFVESEIDEWINQRIAE  59
           S+ L+RL +V+ +TG  ++ IY  M  G FP + +K+G+ ++A +ESEIDEWIN ++A+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

157) TY21A_13425 in NC_021176


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 46.1 bits (155),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 40/62 (65%), Gaps = 1/62 (1%)

Query  22  ITQERFLRLPEVMHLCGLSRSTIYELIRKGEFPPQ-VSLGGKNVAWLHSEITAWMAGRIA  80
           +T +++LRL +V +  GL RS IY  ++ G FP   + +G  +VAWL+SEI  W+  ++A
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  81  GR  82
            R
Sbjct  61  NR  62

158) alpA in NC_013892


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.8 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 42/57 (74%), Gaps = 1/57 (1%)

Query  9   NLIRLPEVQRRTGYSKAWIYKLISDGEFPKQV-KIGPRSIAFIESEIDNWIAQRIAE  64
           +L+RL +V+ +TG  ++ IY  + +G FP+ + K+GP S+A +ESEID+WI  ++A+
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

159) t2651 in NC_004631


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.8 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 40/62 (65%), Gaps = 1/62 (1%)

Query  6   ITQERFLRLPEVMHLCGLSRSTIYELIRKGEFPPQ-VSLGGKNVAWLHSEITAWMAGRIA  64
           +T +++LRL +V +  GL RS IY  ++ G FP   + +G  +VAWL+SEI  W+  ++A
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

Query  65  GR  66
            R
Sbjct  61  NR  62

160) HS_1424 in NC_008309


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.6 bits (153),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 27/59 (46%), Positives = 43/59 (73%), Gaps = 1/59 (1%)

Query  2   ERILRIKDVCQKTGLPRSTIYARIKQGTFP-AQLKLGARSSGWKESELDLWIEQIQSAR  59
           +++LR+K+V +KTGL RS IY  +K G+FP + +K+G+ S +W ESE+D WI+   + R
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

161) Tcr_2205 in NC_007520


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.6 bits (153),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 24/55 (44%), Positives = 37/55 (68%), Gaps = 2/55 (3%)

Query  5   VPEQLLPLPKVEMMIGLKKSKIYALIKTGEFPKN--RVIKGKALWLSSEIQNWIS  57
            ++QLL L +VE   GLK+S+IY  +K G FP++  +V  +   WL SEI++WI+
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

162) BBta_0434 in NC_009485


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.6 bits (153),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 23/56 (42%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  2   LASDRIVRLKTVLARTGLSRSTIYRKIAEGTFP-PQIKISVNGAGWRESDIDRWVA  56
           ++S++++RLK V  +TGL RS IY  +  G+FP + IK++  + +W ES+ID W+ 
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

163) Spro_3885 in NC_009832


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.6 bits (153),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 40/59 (68%), Gaps = 1/59 (1%)

Query  5   AHTLIRLPAVQRRTGYSKAWIYRLMSQGKFPPS-VKIGTRAIAFVEREIDDWVNQRIAE  62
           +H L+RL  V+ +TG  ++ IY  M  G FP S +K+G  ++A +E EID+W+N ++A+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

164) RSKD131_2324 in NC_011963


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 27/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query  6   LRRPAVEEATGLSRSAIYELMSKGQFPRP-VKLTGKAVAWPESAIAEWLAQRAAA  59
           LR   VEE TGL RS IY  M  G FPR+ +K+   +VAW ES I EW+  + A 
Sbjct  7   LRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

165) ambt_20755 in NC_015554


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 45.3 bits (152),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 36/54 (67%), Gaps = 0/54 (0%)

Query  4   KIVRMKEVQRITGLSRSTIYAQIAKGQFPKQVKLTGARSVGWHEAAIIEWIEAR  57
           +++R+K+V+  TGL RS IY  +  G FP+ +   G+ SV+W E+ I EWI+ +
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLK  58

166) W5S_3564 in NC_017845


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 44.8 bits (150),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 44/60 (74%), Gaps = 1/60 (1%)

Query  3   SSEKLLRLAEVKGRTGYSKAWIYKLIAQNRFPQPI-KIGSRSIAFIESEIDEWINQRIAE  61
           +S++LLRL +V  +TG  ++ IY  +    FP++I K+G+ S+A +ESEIDEWIN ++A+
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

167) Mesop_2566 in NC_015675


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 44.8 bits (150),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 38/54 (71%), Gaps = 1/54 (1%)

Query  4   PDHIMRLKTVLARTGLSRSTIYRKIAEGSFP-AQIKISITGAGWRESDVNRWIA  56
           +++++RLK V  +TGL RS IY  +  GSFP + IK++ ++ +W ES+++ WI 
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

168) CFSAN002050_11655 in NC_021818


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 44.5 bits (149),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 24/53 (46%), Positives = 36/53 (68%), Gaps = 2/53 (3%)

Query  1   MDLKEVCKAVGFKKVSIYSWMNAGEFPKS-IKIGR-SVRWLSTEVEEWIAEKI  51
           + LK+V    G+K+  IY  M++G FP+S IK+G  SV WL +E++EWI  K+
Sbjct  7   LRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

169) AHML_07190 in NC_021290


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 44.5 bits (149),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 24/56 (43%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  10  LLKRQQVEAATSLSRSTIYDMMSKGQFPKP-IRLGAQRVAWRERDIIEWLEHQVSS  64
           LL+ +QVE  T+L RS IY  M  G FP++ I++G+  VAW E +I EW++ ++++
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

170) ELI_00935 in NC_007722


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 44.0 bits (147),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 37/57 (65%), Gaps = 1/57 (1%)

Query  21  RLIHLPEVQHRVGLGRSTIYRWMAEGKFP-GPVELGGYSVAWEERAIDVWISQRLDS  76
           +L++L +V+++ GL RS IY  M  G FP + + +G  SVAW E  ID WI+ +L +
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

171) RPC_0150 in NC_007925


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 44.0 bits (147),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 37/54 (69%), Gaps = 1/54 (1%)

Query  4   PDRIIRLKTVLSRTGLSRSTIYRKITEGTFP-AQIRISVNGAGWHESEINRWIA  56
           +++++RLK V  +TGL RS IY  +  G+FP + I+++  + +W ESEI+ WI 
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

172) VEA_001834 in NC_013456


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 44.0 bits (147),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 24/56 (43%), Positives = 37/56 (67%), Gaps = 1/56 (1%)

Query  3   NFLNLEQVETKTTLCKSTIYKLMKNGEFPKNFT-VSGKSKAWDEKEVEDWMMSKIG  57
           ++L L QVE KT L +S IY  MK G FP+++  V+  S AW E E+++W+  K++
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

173) Dda3937_00943 in NC_014500


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 43.7 bits (146),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 25/57 (44%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  5   LIRLPEVQRRTGYSKAWVYRLMARKQFP-SAVKIGSRAIAFVESEIDEWINQRIAER  60
           L+RL +V+ +TG  ++ +Y  M    FP S +K+G+ ++A +ESEIDEWIN ++A+R
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

174) ESA_00625 in NC_009778


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 43.7 bits (146),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 37/56 (67%), Gaps = 1/56 (1%)

Query  1   MRLPEVINICGLSRSTIYDLICREQFP-SQISLGGKNVAWLASEIDDWMQARIAQR  55
           +RL +V +  GL RS IY  +    FP S I +G  +VAWL SEID+W++ ++A+R
Sbjct  7   LRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

175) A3UG_04565 in NC_018079


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 43.5 bits (145),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 25/60 (42%), Positives = 41/60 (69%), Gaps = 1/60 (1%)

Query  2   SKALIRLPEVQRRTGYSKAWIYRLLKERKFPQSV-KIGSRSIAFVESEIDAWITQRIEER  60
           S  L+RL +V+ +TG  ++ IY  +K   FP+S+ K+G+ S+A +ESEID WI  ++ +R
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

176) alpA in NC_013892


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 43.5 bits (145),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  8   ENLIRLPEVQRRTGYSKAWIYKLISDGEFPKQ-IKLGSRSIAFIESEIDNWIAQRIAG  64
           ++L+RL +V+ +TG  ++ IY  + +G FP+  IK+G+ S+A +ESEID+WI  ++A 
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

177) alpA in NC_014228


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 43.5 bits (145),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  8   ENLIRLPEVQRRTGYSKAWIYKLISDGEFPKQ-IKLGSRSIAFIESEIDNWIAQRIAG  64
           ++L+RL +V+ +TG  ++ IY  + +G FP+  IK+G+ S+A +ESEID+WI  ++A 
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

178) Ping_1598 in NC_008709


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 43.5 bits (145),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 41/62 (67%), Gaps = 2/62 (3%)

Query  5   SKKIIRLPEVKDMTGLARATIYKKMATDDFPMSINLSSGCGRAVGWVEIEILDWINERIE  64
           S +++RL +V + TGL R+ IY  M  + FP SI +  G + +V+W+E EI +WIN ++ 
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSI-IKVGPA-SVAWLESEIDEWINLKLA  60

Query  65  ER  66
           +R
Sbjct  61  NR  62

179) ECED1_3320 in NC_011745


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 43.2 bits (144),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 25/60 (42%), Positives = 41/60 (69%), Gaps = 1/60 (1%)

Query  3   NNNSFIRLSEVMRRTGYGRAWIYRLISLGRFPKPV-KIGPRSVAFIESEVDEWINQRIDA  61
            ++ ++RL +V  +TG  R+ IY  +  G FP+++ K+GP SVA +ESE+DEWIN ++  
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

180) YSA_03456 in NC_017986


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.9 bits (143),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 24/54 (45%), Positives = 36/54 (67%), Gaps = 1/54 (1%)

Query  16  KILRLRDVEAIVGLKRSTIYRKISEGLFPRQRLLCG-SSVGWRNSEVQAWIRQR  68
           ++LRL++VE   GLKRS IY  +  G FPR  +  G +SV+W +SE++ WI  +
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLK  58

181) AciX8_1756 in NC_016631


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.9 bits (143),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 38/57 (67%), Gaps = 1/57 (1%)

Query  4   IIRLPAVLACTGLSRSSLYAQMAAKTFPQSI-SLGDRAVGWLQSEIESWQEQRIALR  59
           ++RL  V   TGL RS +Y  M + +FP+SI  +G  +V+WL+SEI+ W + ++A R
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

182) OA238_c14340 in NC_020908


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.9 bits (143),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 23/54 (43%), Positives = 34/54 (63%), Gaps = 1/54 (1%)

Query  2   PENHLRRPAVEAATGLSRSSLYAMMGSGDFPRP-IRIGRRAVAWPESAVLAWLA  54
           +++ LR   VE  TGL RS +Y  M +G FPR+ I++G  +VAW ES +  W+ 
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

183) S70_17370 in NC_017731


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.7 bits (142),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 41/58 (71%), Gaps = 1/58 (1%)

Query  9   ENLIRLPEVMRRTGYGKAWIYRLIETGQFPKSV-KIGTRSIAFVESEVDEWIANKIAE  65
           ++L+RL +V  +TG  ++ IY  +  G FP+S+ K+G  S+A +ESE+DEWI  K+A+
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

184) YE105_C1330 in NC_015224


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 23/56 (42%), Positives = 36/56 (65%), Gaps = 2/56 (3%)

Query  1   MITCELLTIARVERAVGYDRTTIYLRIKEGTFPKP-IKDGRNS-RWTSTDIQEWID  54
           M + +LL + +VE   G  R+ IYL +K G+FP++ IK G  S  W  ++I+EWI+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

185) O3M_06345 in NC_018650


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.1 bits (140),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 25/59 (43%), Positives = 40/59 (68%), Gaps = 7/59 (11%)

Query  19  SPRILRLKDVMKKMGISRSTIYDWLNPKSPRYDGTFPKQK-RLGRQSVGWLESELNEWV  76
           S ++LRLK+V  K G+ RS IY  ++      +G+FP+   ++G  SV+WLESE++EW+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMK------GGSFPRSIIKVGPASVAWLESEIDEWI  55

186) O3O_19350 in NC_018661


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.1 bits (140),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 25/59 (43%), Positives = 40/59 (68%), Gaps = 7/59 (11%)

Query  19  SPRILRLKDVMKKMGISRSTIYDWLNPKSPRYDGTFPKQK-RLGRQSVGWLESELNEWV  76
           S ++LRLK+V  K G+ RS IY  ++      +G+FP+   ++G  SV+WLESE++EW+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMK------GGSFPRSIIKVGPASVAWLESEIDEWI  55

187) O3K_06300 in NC_018658


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.1 bits (140),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 25/59 (43%), Positives = 40/59 (68%), Gaps = 7/59 (11%)

Query  19  SPRILRLKDVMKKMGISRSTIYDWLNPKSPRYDGTFPKQK-RLGRQSVGWLESELNEWV  76
           S ++LRLK+V  K G+ RS IY  ++      +G+FP+   ++G  SV+WLESE++EW+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMK------GGSFPRSIIKVGPASVAWLESEIDEWI  55

188) ECABU_c03460 in NC_017631


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.1 bits (140),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 22/53 (42%), Positives = 38/53 (72%), Gaps = 1/53 (1%)

Query  5   NSLIRLSEVQRRTGYSKAWIYRLISQGRFPKQ-VKIGSRAIAFVESEIDEWIE  56
           + L+RL +V+ +TG  ++ IY  +  G FP+  +K+G+ ++A +ESEIDEWI+
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

189) ETEC_0317 in NC_017633


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 42.1 bits (140),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 22/53 (42%), Positives = 38/53 (72%), Gaps = 1/53 (1%)

Query  5   NSLIRLSEVQRRTGYSKAWIYRLISQGRFPKQ-VKIGSRAIAFVESEIDEWIE  56
           + L+RL +V+ +TG  ++ IY  +  G FP+  +K+G+ ++A +ESEIDEWI+
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

190) A79E_1776 in NC_018522


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 24/51 (48%), Positives = 37/51 (73%), Gaps = 1/51 (1%)

Query  11  KLIRLSEVIRKTGFGKTWIYKLISAGKFPKQ-IKIGERAVAFIESEVDEWI  60
           +L+RL +V  KTG+ ++ IY  + +G FP+  IK+G  +VA +ESE+DEWI
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

191) Z3946 in NC_002655


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  7   RLIRLPEVLHRTGYGKAWIYHLINQNRFPSPV-KIGARSVAFIESEVDEWIQLTIEN  62
           +L+RL +V ++TG  ++ IY  ++   FP ++ K+G+ SVA +ESE+DEWI+L + N
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

192) ECs3513 in NC_002695


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  7   RLIRLPEVLHRTGYGKAWIYHLINQNRFPSPV-KIGARSVAFIESEVDEWIQLTIEN  62
           +L+RL +V ++TG  ++ IY  ++   FP ++ K+G+ SVA +ESE+DEWI+L + N
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

193) ECSP_3595 in NC_013008


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  7   RLIRLPEVLHRTGYGKAWIYHLINQNRFPSPV-KIGARSVAFIESEVDEWIQLTIEN  62
           +L+RL +V ++TG  ++ IY  ++   FP ++ K+G+ SVA +ESE+DEWI+L + N
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

194) CDCO157_3275 in NC_017906


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  7   RLIRLPEVLHRTGYGKAWIYHLINQNRFPSPV-KIGARSVAFIESEVDEWIQLTIEN  62
           +L+RL +V ++TG  ++ IY  ++   FP ++ K+G+ SVA +ESE+DEWI+L + N
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

195) ECO55CA74_24450 in NC_017656


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 23/55 (42%), Positives = 40/55 (73%), Gaps = 1/55 (1%)

Query  7   TNQSLIRLPEVLKRTGFGKAWVYRLIKDGKFPAP-VKIGTRAVAFVESEIDAWIQ  60
           T++ L+RL +V  +TG+ ++ +Y  +K+G FP + +K+G  +VA +ESEID WI+
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

196) ECED1_2322 in NC_011745


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.6 bits (138),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 24/51 (48%), Positives = 37/51 (73%), Gaps = 1/51 (1%)

Query  11  KLIRLSEVIRKTGFGKTWIYKLISAGKFPKQ-IKIGDRAVAFIESEVDEWI  60
           +L+RL +V  KTG+ ++ IY  + +G FP+  IK+G  +VA +ESE+DEWI
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

197) Ser39006_1276 in NC_022268


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.6 bits (138),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 26/56 (47%), Positives = 40/56 (72%), Gaps = 1/56 (1%)

Query  1   MTARRLIRLPEVMNKTGYSKAWIYRLISRGDFPEP-IKIGIRASAFVESEIDEWIE  55
           MT+++L+RL +V +KTG  ++ IY  +  G FP + IK+G  + A +ESEIDEWI+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

198) alpA in NC_017574


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.6 bits (138),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 34/51 (67%), Gaps = 1/51 (1%)

Query  11  ILRRKQVEAATGLSRSSIYQRIKERTFP-AAIQLGPRAVGWRAGDIEAFLA  60
           +LR KQVE  TGL RS IY  +K  +FP + I++GP +V+W  ++I+  + 
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

199) SLG_29070 in NC_015976


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.6 bits (138),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 22/53 (42%), Positives = 34/53 (65%), Gaps = 1/53 (1%)

Query  5   EKIIRLKTVLTRTGLSRSTLYRKIAEGSFPRQIT-ISVHGTGWHESAVDRWIA  56
           ++++RLK V  +TGL RS +Y  +  GSFPR I  ++  + +W ES +D WI 
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

200) Pmen_3994 in NC_009439


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 24/57 (43%), Positives = 39/57 (69%), Gaps = 2/57 (3%)

Query  21  LLQLPEVCRQAGFGKTAIYRMMKEGTFPEP-IKIGPAS-RWSQIEVQAWIEKQKAAR  75
           LL+L +V  ++G+ ++ IY  MK G+FP + IK+GPAS  W + E++ WI+ + A R
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

201) ECO55CA74_15695 in NC_017656


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.4 bits (137),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 41/57 (72%), Gaps = 1/57 (1%)

Query  7   RLIRLPEVLHRTGYGKAWIYHLINQNRFPSPV-KIGARSVAFIESEVNEWIQLTIEN  62
           +L+RL +V ++TG  ++ IY  ++   FP ++ K+G+ SVA +ESE++EWI+L + N
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

202) ECA2918 in NC_004547


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.1 bits (136),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 37/53 (70%), Gaps = 1/53 (1%)

Query  10  QSLIRLPEVKRRTGFGKTWIYALIKSGRFP-SQVKTGVRAVAFIESEVDAWIE  61
           + L+RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESE+D WI+
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

203) Entcl_1099 in NC_014618


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 41.1 bits (136),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 25/60 (42%), Positives = 40/60 (67%), Gaps = 7/60 (11%)

Query  5   SAVRILRLPAVIHKTGISRATIYDWLNPRSPRYDPTFPKKR-KLGTQSVGWLESEIDEWL  63
           ++ ++LRL  V +KTG+ R+ IY  ++      + +FP+   K+G  SV+WLESEIDEW+
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMK------GGSFPRSIIKVGPASVAWLESEIDEWI  55

204) STBHUCCB_9230 in NC_016832


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.8 bits (135),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 37/51 (73%), Gaps = 1/51 (1%)

Query  11  KLIRLPEVKRRTGFGKTWIYTLIRAGKFPKQ-VKTGLRSIAFIESEIDEWI  60
           +L+RL +V  +TG+ ++ IY  +++G FP+  +K G  S+A +ESEIDEWI
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

205) TY21A_04400 in NC_021176


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.8 bits (135),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 37/51 (73%), Gaps = 1/51 (1%)

Query  11  KLIRLPEVKRRTGFGKTWIYTLIRAGKFPKQ-VKTGLRSIAFIESEIDEWI  60
           +L+RL +V  +TG+ ++ IY  +++G FP+  +K G  S+A +ESEIDEWI
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

206) t04980 in NC_004631


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.8 bits (135),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 37/51 (73%), Gaps = 1/51 (1%)

Query  11  KLIRLPEVKRRTGFGKTWIYTLIRAGKFPKQ-VKTGLRSIAFIESEIDEWI  60
           +L+RL +V  +TG+ ++ IY  +++G FP+  +K G  S+A +ESEIDEWI
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

207) M636_20505 in NC_021848


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.8 bits (135),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 23/49 (47%), Positives = 36/49 (74%), Gaps = 1/49 (2%)

Query  2   EKTELSRSAIYRKMNDDAFPKSV-NLGDRAVAWVESEVDYWVESILLTR  49
           EKT L RS IY  M++++FP+S+ ++G  +VAW+ESE+D W++  L  R
Sbjct  14  EKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

208) PAGR_g2494 in NC_017554


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.6 bits (134),  Expect = 7e-05, Method: Compositional matrix adjust.
 Identities = 26/56 (47%), Positives = 40/56 (72%), Gaps = 1/56 (1%)

Query  1   MTTRRLIRLPEVMNKTGYSKAWIYRLISKGVFPEP-IKIGIRARAFVESEIDEWIE  55
           MT+++L+RL +V +KTG  ++ IY  +  G FP + IK+G  + A +ESEIDEWI+
Sbjct  1   MTSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

209) Pcryo_1618 in NC_007969


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.6 bits (134),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 27/64 (43%), Positives = 36/64 (57%), Gaps = 7/64 (10%)

Query  19  QLLSLKAVKEYTGISRSTIYAMADVNSAQYDPTFPKKV-QLTQVRVAWVASEIAEWINEK  77
           QLL LK V E TG+ RS IY          + +FP+ + ++    VAW+ SEI EWIN K
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMK------GGSFPRSIIKVGPASVAWLESEIDEWINLK  58

Query  78  IEAR  81
           +  R
Sbjct  59  LANR  62

210) ETAF_2788 in NC_017309


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.6 bits (134),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 23/55 (42%), Positives = 39/55 (71%), Gaps = 1/55 (1%)

Query  7   TNQSLIRLPEVLKRTGFGKAWIYRLISEGRFPAP-VKIGVRAVAFVESEVDEWIQ  60
           T++ L+RL +V  +TG+ ++ IY  +  G FP + +K+G  +VA +ESE+DEWI+
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

211) alpA in NC_011741


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.6 bits (134),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 23/55 (42%), Positives = 39/55 (71%), Gaps = 1/55 (1%)

Query  4   TNQSLIRLPEVLKRTGFGKAWIYRLISEGRFPAP-VKIGVRAVAFVESEVDEWIQ  57
           T++ L+RL +V  +TG+ ++ IY  +  G FP + +K+G  +VA +ESE+DEWI+
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

212) CSSP291_03135 in NC_020260


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.3 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 40/57 (71%), Gaps = 7/57 (12%)

Query  7   KILRMRDVMLKTGLARATIYDWLNPKSPRYDATFPKQR-RLGKQSVGWLESEIDQWV  62
           ++LR+++V  KTGL R+ IY  ++      +++FP+   ++G  SV+WLESEID+W+
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMK------GGSFPRSIIKVGPASVAWLESEIDEWI  55

213) SARI_00926 in NC_010067


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.3 bits (133),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 38/56 (68%), Gaps = 1/56 (1%)

Query  11  KLIRLSEVIRRTGFGKTWIYTLIKTGRFP-SQVKTGVRAVAFIESEIDAWIDNAIA  65
           +L+RL +V  +TG+ ++ IY  +K G FP S +K G  +VA +ESEID WI+  +A
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

214) Pecwa_1730 in NC_013421


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.0 bits (132),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 38/53 (72%), Gaps = 1/53 (1%)

Query  10  QRLIRLPEVKRRTGFGKTWIYELIKAGRFP-SQVKTGLRSIAFIESEVDAWIE  61
           ++L+RL +V  +TG+ ++ IY  +K+G FP S +K G  S+A +ESE+D WI+
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

215) SeSA_A2907 in NC_011094


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 40.0 bits (132),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 23/54 (43%), Positives = 39/54 (73%), Gaps = 1/54 (1%)

Query  6   PTRLIRLPEVLQRTGYGKAWIYRLISEGRFPAPV-KIGARAVAFVESEIDEWID  58
           + +L+RL +V ++TG  ++ IY  +  G FP ++ K+G+ +VA +ESEIDEWI+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

216) Alide2_2695 in NC_015422


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.8 bits (131),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 34/54 (63%), Gaps = 1/54 (1%)

Query  10  LLRLPNVMRLTGLARSTIYKLIAAGEFP-APRKLTRRAVAWPASEVEQWVVARV  62
           LLRL +V   TGL RS IY  + +G FP +  K+   +VAW  SE+++W+  ++
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKL  59

217) EC042_2847A in NC_017626


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.8 bits (131),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 24/59 (41%), Positives = 40/59 (68%), Gaps = 1/59 (1%)

Query  8   NSKRLIRLPEVLNRTGLCKAWIYRLISRNEFPSPI-KLGERAIAFLESDIDKWIDEKIT  65
            S +L+RL +V ++TGL ++ IY  +    FP +I K+G  ++A LES+ID WI+ K++
Sbjct  2   TSHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLA  60

218) SeAg_B2092 in NC_011149


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  12  FIRLPEVIKRTGFGKTWIYELIKAGRFP-SQVKTGIRAVAFIESEIDEWIEATIRN  66
           ++RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESEIDEWI+  + N
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

219) SeD_A2334 in NC_011205


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  12  FIRLPEVIKRTGFGKTWIYELIKAGRFP-SQVKTGIRAVAFIESEIDEWIEATIRN  66
           ++RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESEIDEWI+  + N
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

220) SEN1998 in NC_011294


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  12  FIRLPEVIKRTGFGKTWIYELIKAGRFP-SQVKTGIRAVAFIESEIDEWIEATIRN  66
           ++RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESEIDEWI+  + N
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

221) SG2024 in NC_011274


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  12  FIRLPEVIKRTGFGKTWIYELIKAGRFP-SQVKTGIRAVAFIESEIDEWIEATIRN  66
           ++RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESEIDEWI+  + N
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

222) SPUCDC_0899 in NC_022221


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  12  FIRLPEVIKRTGFGKTWIYELIKAGRFP-SQVKTGIRAVAFIESEIDEWIEATIRN  66
           ++RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESEIDEWI+  + N
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

223) SPUL_0899 in NC_016831


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  12  FIRLPEVIKRTGFGKTWIYELIKAGRFP-SQVKTGIRAVAFIESEIDEWIEATIRN  66
           ++RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESEIDEWI+  + N
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

224) I137_04075 in NC_021984


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 1/56 (1%)

Query  12  FIRLPEVIKRTGFGKTWIYELIKAGRFP-SQVKTGIRAVAFIESEIDEWIEATIRN  66
           ++RL +V  +TG+ ++ IY  +K+G FP S +K G  +VA +ESEIDEWI+  + N
Sbjct  6   LLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

225) ETAC_14735 in NC_020796


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.5 bits (130),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 38/54 (71%), Gaps = 1/54 (1%)

Query  5   NQSLIRLPEVLKRTGFGKAWIYRLISEGRFPAP-VKIGVRAVAFVESEVDEWIQ  57
           ++ L+RL +V  +TG+ ++ IY  +  G FP + +K+G  +VA +ESE+DEWI+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

226) SARI_00214 in NC_010067


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 39.0 bits (128),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 23/54 (43%), Positives = 38/54 (71%), Gaps = 1/54 (1%)

Query  5   ATRLIRLPEVLERTGYGKAWIYRLISEGRFPAP-VKIGVRAVAFVESEVDEWIQ  57
           + +L+RL +V E+TG  ++ IY  +  G FP + +K+G  +VA +ESE+DEWI+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

227) Ent638_2904 in NC_009436


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 38.5 bits (126),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 22/54 (41%), Positives = 38/54 (71%), Gaps = 1/54 (1%)

Query  5   NSRLIRLPEVMNKTGYCKAWVYRLISEGRFPAPV-KIGVRAVAFVESEVDEWIQ  57
           + +L+RL +V +KTG  ++ +Y  +  G FP ++ K+G  +VA +ESE+DEWI+
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

228) Nitsa_1826 in NC_014935


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 37.7 bits (123),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 23/53 (44%), Positives = 36/53 (68%), Gaps = 2/53 (3%)

Query  10  DRLLNIKQVSEKTSLGQTKIYEMIKLNEFPPP-VKLGRSR-RWRESDIDRWIA  60
           ++LL +KQV EKT+L +++IY  +K   FP + +K+G +   W ES+ID WI 
Sbjct  4   HQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWIN  56

229) DaAHT2_2155 in NC_014216


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 36.9 bits (120),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 20/48 (42%), Positives = 30/48 (63%), Gaps = 1/48 (2%)

Query  17  KVGLSDPTIWRLEKKGKFPKRL-RLGGNSCGWLEHEVNEWINNRAAER  63
           K GL  + I    K G FP+ + ++G  S +WLE E++EWIN + A+R
Sbjct  15  KTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62

230) PputGB1_4148 in NC_010322


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 36.6 bits (119),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 22/53 (42%), Positives = 34/53 (65%), Gaps = 2/53 (3%)

Query  2   SEALLDRKEVCKRIGFSHTFVYKEMREGRFPKHR-KIGNRS-RWLESEVDDWI  52
           S+ LL  K+V  + G+ ++ +Y  M+ G FP+   K+G  S  WLESE+D+WI
Sbjct  3   SHQLLRLKQVEEKTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWI  55

231) SYNW2105 in NC_005070


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 36.4 bits (118),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 20/46 (44%), Positives = 31/46 (68%), Gaps = 1/46 (2%)

Query  2   TGLSTSTIYRWMTDGTFPKQI-QLGSRSVVWNERDVIDWMNAQNAN  46
           TGL  S IY  M +G+FP+ I ++G+ SV W E ++ +W+N + AN
Sbjct  16  TGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLAN  61

232) D781_3436 in NC_020064


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 36.1 bits (117),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 36/57 (64%), Gaps = 7/57 (12%)

Query  7   KILRIPAVVNKLGIARSTIYDWLNTNSPRHDPAFPKPY-PLGKQSVGWLESELDEWV  62
           ++LR+  V +K G+ RS IY  ++  S      FP++   +G  SV+WLESE+DEW+
Sbjct  5   QLLRLKQVEEKTGLKRSQIYLYMKGGS------FPRSIIKVGPASVAWLESEIDEWI  55

233) W5S_1640 in NC_017845


> NC_010554_P1|64|G57|197286452|YP_002152324.1|Proteus_mirabilis_HI4320|+|63940..64128|-|PMI2608|prophage 
regulatory protein
Length=62

 Score = 33.0 bits (105),  Expect = 0.016, Method: Compositional matrix adjust.
 Identities = 20/48 (42%), Positives = 32/48 (67%), Gaps = 1/48 (2%)

Query  3   KTGFGKAWIYRLISEERFPRPV-KIGIRAVAFVENEIDEWILTAIEKR  49
           KTG+ ++ IY  +    FPR++ K+G  +VA +E+EIDEWI   + +R
Sbjct  15  KTGLKRSQIYLYMKGGSFPRSIIKVGPASVAWLESEIDEWINLKLANR  62