Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
T3SS effector EspM |
NC_013353 (Escherichia coli 12009) |
4e-87 |
100 |
|
T3SS effector protein EspM2 |
NC_013716 (Citrobacter rodentium ICC168) |
4e-57 |
56 |
|
T3SS effector protein EspM3 |
NC_013716 (Citrobacter rodentium ICC168) |
2e-51 |
59 |
|
T3SS effector EspM |
NC_013361 (Escherichia coli 11368) |
3e-48 |
54 |
|
EspM3 protein |
NC_011353 (Escherichia coli EC4115) |
3e-48 |
54 |
|
chaperone protein |
NC_002655 (Escherichia coli EDL933) |
3e-48 |
54 |
|
bfpT-regulated chaperone-like protein |
NC_002695 (Escherichia coli Sakai) |
3e-48 |
54 |
|
non-LEE-encoded type III effector |
NC_013008 (Escherichia coli TW14359) |
3e-48 |
54 |
|
bfpT-regulated chaperone-like protein |
NC_017906 (Escherichia coli Xuzhou21) |
3e-48 |
54 |
|
T3SS secreted effector EspM-like protein |
NC_013364 (Escherichia coli 11128) |
4e-48 |
54 |
|
chaperone protein |
NC_002655 (Escherichia coli EDL933) |
2e-46 |
53 |
|
chaperone-like protein |
NC_002695 (Escherichia coli Sakai) |
2e-46 |
53 |
|
chaperone-like protein |
NC_017906 (Escherichia coli Xuzhou21) |
2e-46 |
53 |
|
T3SS effector EspM |
NC_013361 (Escherichia coli 11368) |
8e-46 |
58 |
|
T3SS secreted effector EspM-like protein |
NC_013364 (Escherichia coli 11128) |
2e-45 |
53 |
|
T3SS effector EspM |
NC_013353 (Escherichia coli 12009) |
5e-45 |
56 |
|
non-LEE-encoded type III effector |
NC_013008 (Escherichia coli TW14359) |
5e-45 |
52 |
|
chaperone protein |
NC_013941 (Escherichia coli CB9615) |
3e-43 |
56 |
|
chaperone protein |
NC_013941 (Escherichia coli CB9615) |
2e-42 |
55 |
|
chaperone protein |
NC_017656 (Escherichia coli RM12579) |
2e-42 |
55 |
|
IpgB2 |
NC_010660 (Shigella boydii CDC 3083-94) |
2e-41 |
49 |
|
IpgB2 |
NC_007608 (Shigella boydii Sb227) |
2e-41 |
49 |
|
IpgB2 |
NC_007385 (Shigella sonnei Ss046) |
2e-41 |
49 |
|
IpgB2, probably secreted by the Mxi-Spa machinery |
NC_017319 (Shigella flexneri 2002017) |
3e-41 |
49 |
|
hypothetical protein |
NC_004851 (Shigella flexneri 301) |
3e-41 |
49 |
|
IpgB2 |
NC_007607 (Shigella dysenteriae Sd197) |
4e-41 |
49 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_013353_P1' AND ph.id_pai_orf='63' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc