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Homologs of int gene of AJ277443

410

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECO111_5079
( YP_003237359.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

0.0

100

2) ECO26_5300
( YP_003232178.1 )

integrase

NC_013361
(Escherichia coli 11368)

0.0

100

3) ECO103_3550
( YP_003223418.1 )

integrase

NC_013353
(Escherichia coli 12009)

0.0

100

4) ECO103_4929
( YP_003224745.1 )

integrase

NC_013353
(Escherichia coli 12009)

0.0

100

5) E2348C_3220
( YP_002330696.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

0.0

100

6) intB
( YP_003501106.1 )

Site-specific recombinase, phage integrase family protein

NC_013941
(Escherichia coli CB9615)

0.0

7) ECH74115_4272
( YP_002272448.1 )

site-specific recombinase, phage integrase family protein

NC_011353
(Escherichia coli EC4115)

0.0

8) Z4313
( NP_289539.1 )

pathogenicity island integrase

NC_002655
(Escherichia coli EDL933)

0.0

9) ECO55CA74_17295
( YP_006160577.1 )

Site-specific recombinase, phage integrase family protein

NC_017656
(Escherichia coli RM12579)

0.0

10) ECs3843
( NP_311870.1 )

integrase

NC_002695
(Escherichia coli Sakai)

0.0

11) ECSP_3940
( YP_003079757.1 )

pathogenicity island integrase

NC_013008
(Escherichia coli TW14359)

0.0

12) CDCO157_3594
( YP_006314460.1 )

integrase

NC_017906
(Escherichia coli Xuzhou21)

0.0

13) EC042_3174
( YP_006097466.1 )

integrase

NC_017626
(Escherichia coli 042)

0.0

14) c5216
( NP_757064.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

0.0

15) int
( YP_002400684.1 )

Prophage integrase

NC_011745
(Escherichia coli ED1a)

0.0

16) EC042_4610
( YP_006098876.1 )

integrase

NC_017626
(Escherichia coli 042)

0.0

17) O3M_04655
( YP_006768605.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

0.0

18) O3O_21040
( YP_006782711.1 )

Prophage integrase

NC_018661
(Escherichia coli 2009EL-2071)

0.0

19) O3K_04610
( YP_006777642.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

0.0

20) ECP_2962
( YP_670846.1 )

P4-type integrase

NC_008253
(Escherichia coli 536)

0.0

21) int
( YP_002404232.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

0.0

22) EcE24377A_3314
( YP_001464322.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

0.0

23) UMNK88_3667
( YP_006135366.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

0.0

24) EcolC_3878
( YP_001726809.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

0.0

25) APECO1_3534
( YP_854214.1 )

P4-like integrase

NC_008563
(Escherichia coli APEC O1)

0.0

26) CE10_4872
( YP_006146828.1 )

Prophage integrase

NC_017646
(Escherichia coli CE10)

0.0

27) int
( YP_002392871.1 )

Prophage integrase

NC_011742
(Escherichia coli S88)

0.0

28) int
( YP_002410463.1 )

Prophage integrase

NC_011750
(Escherichia coli IAI39)

0.0

29) ROD_50201
( YP_003368377.1 )

integrase

NC_013716
(Citrobacter rodentium ICC168)

0.0

30) ECO111_3718
( YP_003236059.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

0.0

31) ECO26_4069
( YP_003230994.1 )

integrase

NC_013361
(Escherichia coli 11368)

0.0

32) int
( YP_002409310.1 )

Prophage integrase

NC_011750
(Escherichia coli IAI39)

0.0

33) ETEC_4481
( YP_006118020.1 )

KpLE2 phage-like element; predicted integrase

NC_017633
(Escherichia coli ETEC H10407)

0.0

34) ECED1_3430
( YP_002399303.1 )

integrase

NC_011745
(Escherichia coli ED1a)

0.0

35) EcolC_0747
( YP_001723746.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

0.0

36) ETEC_3157
( YP_006116702.1 )

phage integrase

NC_017633
(Escherichia coli ETEC H10407)

0.0

37) c3556
( NP_755431.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

0.0

38) ECABU_c32560
( YP_006107255.1 )

site-specific recombinase

NC_017631
(Escherichia coli ABU 83972)

0.0

39) int
( YP_859807.1 )

Int ( P4-type integrase)

NC_008563
(Escherichia coli APEC O1)

0.0

40) CE10_3417
( YP_006145430.1 )

integrase

NC_017646
(Escherichia coli CE10)

0.0

41) i14_3273
( YP_006155358.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

0.0

42) i02_3273
( YP_006150439.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

0.0

43) int
( YP_006141472.1 )

Integrase

NC_017644
(Escherichia coli NA114)

0.0

44) ECS88_4720
( YP_002394207.1 )

integrase

NC_011742
(Escherichia coli S88)

0.0

45) ECUMN_3322
( YP_002414004.1 )

integrase

NC_011751
(Escherichia coli UMN026)

0.0

46) O3M_22875
( YP_006772189.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

5e-177

47) O3K_22970
( YP_006781250.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

5e-177

48) int
( YP_002405550.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

5e-177

49) SFxv_3245
( YP_005728584.1 )

Site-specific recombinase, phage integrase family protein

NC_017328
(Shigella flexneri 2002017)

5e-177

50) S4822
( NP_838459.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

5e-177

51) SF2964
( NP_708738.1 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

5e-177

52) S70_06120
( YP_006215787.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

4e-159

53) S70_13465
( YP_006217222.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

4e-159

54) YpsIP31758_0809
( YP_001399793.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-148

55) EAE_09085
( YP_004592016.1 )

prothage integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-148

56) SbBS512_E4662
( YP_001882825.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

2e-139

57) SSON53_18230
( YP_005458150.1 )

P4-type integrase

NC_016822
(Shigella sonnei 53G)

2e-139

58) D782_3965
( YP_007342049.1 )

Integrase

NC_020063
(Enterobacteriaceae bacterium FGI 57)

6e-139

59) SBO_4322
( YP_410566.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

6e-139

60) EcSMS35_4753
( YP_001746674.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

2e-138

61) intB
( YP_002405686.1 )

integrase; KpLE2 phage-like element

NC_011748
(Escherichia coli 55989)

3e-138

62) CFSAN001992_11535
( YP_007472047.1 )

phage integrase family site-specific recombinase

NC_020307
(Salmonella enterica CFSAN001992)

5e-138

63) APECO78_02320
( YP_007379647.1 )

phage integrase family site specific recombinase

NC_020163
(Escherichia coli APEC O78)

5e-138

64) CE10_5017
( YP_006146968.1 )

phage integrase family site specific recombinase

NC_017646
(Escherichia coli CE10)

5e-138

65) EcDH1_3727
( YP_006093621.1 )

integrase family protein

NC_017625
(Escherichia coli DH1)

8e-138

66) intB
( YP_006131525.1 )

site-specific recombinase

NC_017638
(Escherichia coli DH1)

8e-138

67) intB
( YP_001733029.1 )

KpLE2 phage-like element; integrase

NC_010473
(Escherichia coli K-12)

8e-138

68) intB
( YP_492408.1 )

integrase

NC_007779
(Escherichia coli K-12)

8e-138

69) intB
( YP_002415396.1 )

putative integrase; KpLE2 phage-like element

NC_011751
(Escherichia coli UMN026)

8e-138

70) intB
( YP_003001820.1 )

intB

NC_012892
(Escherichia coli BL21(DE3))

1e-137

71) intB
( YP_003056695.1 )

integrase

NC_012971
(Escherichia coli BL21(DE3))

1e-137

72) intB
( YP_002400869.1 )

putative integrase; KpLE2 phage-like element

NC_011745
(Escherichia coli ED1a)

1e-137

73) ECBD_3766
( YP_003037938.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

1e-137

74) ETEC_4611
( YP_006118149.1 )

putative phage integrase

NC_017633
(Escherichia coli ETEC H10407)

1e-137

75) intB
( YP_002410602.1 )

putative integrase; KpLE2 phage-like element

NC_011750
(Escherichia coli IAI39)

1e-137

76) intB
( YP_006171360.1 )

Prophage P4 integrase (Int(P4))

NC_017663
(Escherichia coli P12b)

1e-137

77) intB
( YP_003047305.1 )

putative integrase

NC_012967
(Escherichia coli REL606)

1e-137

78) EKO11_4021
( YP_005279654.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

2e-137

79) KO11_23100
( YP_006166928.1 )

site-specific recombinase, phage integrase family protein

NC_017660
(Escherichia coli KO11FL)

2e-137

80) LY180_22530
( YP_008567507.1 )

integrase

NC_022364
(Escherichia coli LY180)

2e-137

81) ECW_m4652
( YP_006127166.1 )

putative P4-type integrase

NC_017635
(Escherichia coli W)

2e-137

82) WFL_22655
( YP_006175953.1 )

site-specific recombinase, phage integrase family protein

NC_017664
(Escherichia coli W)

2e-137

83) Ser39006_0951
( YP_008521333.1 )

protein of unknown function DUF4102

NC_022268
(Serratia sp. ATCC 39006)

1e-136

84) H650_18245
( YP_008109403.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

2e-136

85) i14_4873a
( YP_006156926.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

4e-136

86) i02_4873a
( YP_006152007.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

4e-136

87) ECP_4521
( YP_672358.1 )

prophage P4 integrase

NC_008253
(Escherichia coli 536)

7e-136

88) ECABU_c48360
( YP_006108746.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

8e-136

89) UM146_21610
( YP_006113162.1 )

prophage P4 integrase

NC_017632
(Escherichia coli UM146)

8e-136

90) EKO11_4043
( YP_005279675.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

2e-135

91) KO11_22995
( YP_006166907.1 )

hypothetical protein

NC_017660
(Escherichia coli KO11FL)

2e-135

92) LY180_22420
( YP_008567485.1 )

integrase

NC_022364
(Escherichia coli LY180)

2e-135

93) intB
( YP_543812.1 )

prophage P4 integrase

NC_007946
(Escherichia coli UTI89)

2e-135

94) WFL_22550
( YP_006175932.1 )

hypothetical protein

NC_017664
(Escherichia coli W)

2e-135

95) EBL_c34780
( YP_006321045.1 )

prophage P4 integrase

NC_017910
(Escherichia blattae DSM 4481)

1e-134

96) ECA2879
( YP_050970.1 )

integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-134

97) Entcl_3878
( YP_003943402.1 )

integrase family protein

NC_014618
(Enterobacter cloacae SCF1)

2e-134

98) YPK_3676
( YP_001722396.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

4e-134

99) PAGR_g3659
( YP_005994368.1 )

integrase

NC_017554
(Pantoea ananatis PA13)

4e-134

100) ECENHK_02620
( YP_006577041.1 )

phage integrase family site-specific recombinase

NC_018405
(Enterobacter cloacae ENHKU01)

1e-133

101) YpAngola_A4051
( YP_001608341.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

1e-133

102) EAM_3037
( YP_003540101.1 )

integrase

NC_013971
(Erwinia amylovora ATCC 49946)

1e-133

103) intB
( YP_003529741.1 )

integrase

NC_013961
(Erwinia amylovora CFBP1430)

1e-133

104) A225_0566
( YP_006496338.1 )

integrase

NC_018106
(Klebsiella oxytoca E718)

1e-133

105) A1122_08715
( YP_005521414.1 )

integrase

NC_017168
(Yersinia pestis A1122)

2e-133

106) YPA_2939
( YP_652846.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

2e-133

107) intB
( YP_002348329.1 )

integrase

NC_003143
(Yersinia pestis CO92)

2e-133

108) intB
( YP_005506227.1 )

integrase

NC_017154
(Yersinia pestis D106004)

2e-133

109) intB
( YP_005510085.1 )

integrase

NC_017160
(Yersinia pestis D182038)

2e-133

110) YPN_0651
( YP_646583.1 )

integrase

NC_008149
(Yersinia pestis Nepal516)

2e-133

111) intB
( YP_003569204.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

2e-133

112) Dd586_0394
( YP_003331995.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

2e-133

113) H650_18115
( YP_008109377.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

2e-133

114) intB
( NP_992037.1 )

integrase

NC_005810
(Yersinia pestis 91001)

2e-133

115) intB
( NP_668085.1 )

integrase

NC_004088
(Yersinia pestis KIM)

2e-133

116) CFSAN002050_05850
( YP_008259116.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

5e-133

117) YPDSF_3248
( YP_001164578.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

1e-132

118) intB
( YP_005625501.1 )

integrase

NC_017265
(Yersinia pestis Harbin 35)

1e-132

119) SbBS512_E4814
( YP_001882951.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

1e-132

120) EC042_4741
( YP_006098991.1 )

integrase

NC_017626
(Escherichia coli 042)

2e-132

121) intB
( YP_410419.1 )

prophage P4 integrase

NC_007613
(Shigella boydii Sb227)

2e-132

122) Ent638_0463
( YP_001175202.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

3e-132

123) intB
( YP_004950346.1 )

prophage P4 integrase

NC_016514
(Enterobacter cloacae EcWSU1)

4e-132

124) KPN2242_01530
( YP_005952795.1 )

site-specific recombinase, phage integrase family protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

8e-132

125) Ser39006_3432
( YP_008523814.1 )

integrase family protein

NC_022268
(Serratia sp. ATCC 39006)

2e-131

126) KPK_4978
( YP_002240755.1 )

phage integrase family site-specific recombinase

NC_011283
(Klebsiella pneumoniae 342)

3e-131

127) int
( YP_002389727.1 )

Prophage integrase

NC_011741
(Escherichia coli IAI1)

1e-129

128) ECO103_5061
( YP_003224874.1 )

integrase

NC_013353
(Escherichia coli 12009)

7e-129

129) ECO55CA74_24440
( YP_006161977.1 )

Prophage integrase

NC_017656
(Escherichia coli RM12579)

1e-128

130) KOX_09480
( YP_005017861.1 )

phage integrase family protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

1e-128

131) SARI_03082
( YP_001572064.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-128

132) YpsIP31758_3540
( YP_001402494.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

2e-128

133) ETAF_2789
( YP_005700383.1 )

Integrase

NC_017309
(Edwardsiella tarda FL6-60)

3e-128

134) ETAC_14745
( YP_007630430.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

3e-128

135) W5S_1543
( YP_006282507.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

1e-127

136) CKO_03532
( YP_001455048.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

8e-127

137) Pecwa_1669
( YP_003259066.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

2e-126

138) SPC_4619
( YP_002640109.1 )

integrase

NC_012125
(Salmonella enterica RKS4594)

4e-126

139) SFV_4227
( YP_691515.1 )

P4-type integrase

NC_008258
(Shigella flexneri 8401)

1e-124

140) SFxv_4606
( YP_005729812.1 )

putative P4-type integrase

NC_017328
(Shigella flexneri 2002017)

3e-124

141) S4839
( NP_839619.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

3e-124

142) SF4224
( NP_709936.2 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

3e-124

143) MU9_135
( YP_007503554.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

1e-123

144) CFSAN002050_22445
( YP_008262355.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

1e-123

145) SARI_03312
( YP_001572286.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-122

146) intB
( YP_002153152.1 )

prophage integrase

NC_010554
(Proteus mirabilis HI4320)

2e-121

147) Ent638_2887
( YP_001177603.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

3e-121

148) intB
( YP_005802313.1 )

protein intB

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-120

149) EpC_14570
( YP_002648472.1 )

phage integrase family protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-120

150) MU9_117
( YP_007503536.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

5e-120

151) Rahaq_1192
( YP_004211942.1 )

integrase family protein

NC_015061
(Rahnella sp. Y9602)

1e-116

152) W5S_0472
( YP_006281470.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

2e-115

153) plu4477
( NP_931643.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-115

154) Dd586_0881
( YP_003332472.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

1e-113

155) Dda3937_03406
( YP_003881783.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

4e-113

156) PC1_0871
( YP_003016457.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-112

157) ECOK1_4788
( YP_006103840.1 )

site-specific recombinase, phage integrase family

NC_017628
(Escherichia coli IHE3034)

4e-112

158) PAU_03981
( YP_003042810.1 )

p4 integrase-like protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

5e-112

159) Pecwa_0718
( YP_003258145.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

2e-111

160) SNSL254_A4836
( YP_002043726.1 )

integrase

NC_011080
(Salmonella enterica SL254)

8e-111

161) Dd703_3541
( YP_002989121.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

2e-110

162) SN31241_8570
( YP_008358775.1 )

Integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-110

163) intB
( YP_003713602.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-110

164) KPHS_05400
( YP_005224840.1 )

putative P4-type integrase

NC_016845
(Klebsiella pneumoniae HS11286)

3e-110

165) N559_4601
( YP_008427480.1 )

P4-type integrase

NC_022082
(Klebsiella pneumoniae JM45)

3e-110

166) SSPA3984
( YP_002144818.1 )

integrase

NC_011147
(Salmonella enterica AKU12601)

3e-110

167) int
( YP_153333.1 )

integrase

NC_006511
(Salmonella enterica ATCC 9150)

3e-110

168) Dd1591_3702
( YP_003005986.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

4e-110

169) SEEB0189_19950
( YP_008310270.1 )

integrase

NC_021844
(Salmonella enterica CFSAN000189)

4e-110

170) intB
( YP_003469249.1 )

KpLE2 phage-like element; P4-like integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

7e-110

171) intA_4
( YP_008574436.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

9e-110

172) ECO26_5435
( YP_003232308.1 )

integrase

NC_013361
(Escherichia coli 11368)

9e-110

173) ENC_43890
( YP_007847599.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

3e-109

174) A464_4477
( YP_008325069.1 )

Integrase

NC_021870
(Salmonella bongori N268-08)

2e-108

175) intB
( YP_003468561.1 )

prophage like-integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

2e-108

176) STY4821
( NP_458899.1 )

integrase

NC_003198
(Salmonella enterica CT18)

2e-108

177) t4518
( NP_808103.1 )

integrase

NC_004631
(Salmonella enterica Ty2)

2e-108

178) TY21A_22985
( YP_007928753.1 )

integrase

NC_021176
(Salmonella enterica Ty21a)

2e-108

179) Y11_15011
( YP_006005000.1 )

integrase

NC_017564
(Yersinia enterocolitica Y11)

3e-108

180) STBHUCCB_9400
( YP_005216516.1 )

CP4-like integrase

NC_016832
(Salmonella enterica P-stx-12)

4e-108

181) t05065
( YP_006892430.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

4e-108

182) TY21A_04490
( YP_007925220.1 )

Prophage integrase

NC_021176
(Salmonella enterica Ty21a)

4e-108

183) W5S_1599
( YP_006282563.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

4e-108

184) intB
( YP_003712791.1 )

KpLE2 phage-like element; P4-like integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

5e-108

185) Dd586_2635
( YP_003334184.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

5e-108

186) ETAE_3092
( YP_003297134.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

6e-108

187) Dd703_2459
( YP_002988063.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

1e-107

188) Pecwa_1586
( YP_003258984.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

1e-107

189) int
( YP_002398227.1 )

Prophage integrase

NC_011745
(Escherichia coli ED1a)

7e-108

190) A79E_1796
( YP_006635603.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

2e-107

191) Pecwa_0447
( YP_003257894.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

3e-107

192) Pecwa_1766
( YP_003259159.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

4e-107

193) intB
( YP_049780.1 )

phage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-106

194) intB
( YP_050980.1 )

integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

5e-107

195) ECABU_c49370
( YP_006108845.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

6e-107

196) c5371
( NP_757219.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

1e-106

197) i14_4891
( YP_006156950.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

1e-106

198) i02_4891
( YP_006152031.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

1e-106

199) W5S_0459
( YP_006281457.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

3e-106

200) SG1638
( YP_455318.1 )

phage integrase

NC_007712
(Sodalis glossinidius morsitans)

4e-106

201) intB
( YP_003714347.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

4e-106

202) ECO111_2624
( YP_003235033.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

2e-105

203) E2348C_2119
( YP_002329631.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

2e-105

204) SeAg_B2068
( YP_002146918.1 )

integrase

NC_011149
(Salmonella enterica SL483)

2e-105

205) Dd703_3034
( YP_002988630.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

2e-105

206) Dd586_1478
( YP_003333051.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

3e-105

207) SG1996
( YP_002226930.1 )

phage integrase

NC_011274
(Salmonella enterica 287/91)

2e-104

208) SEN1970
( YP_002244067.1 )

phage integrase

NC_011294
(Salmonella enterica P125109)

5e-104

209) SPUCDC_0925
( YP_008480613.1 )

phage integrase

NC_022221
(Salmonella enterica CDC1983-67)

6e-104

210) SPUL_0925
( YP_005212155.1 )

phage integrase

NC_016831
(Salmonella enterica RKS5078)

6e-104

211) I137_04205
( YP_008380372.1 )

integrase

NC_021984
(Salmonella enterica S06004)

6e-104

212) SeD_A2305
( YP_002216062.1 )

integrase

NC_011205
(Salmonella enterica CT_02021853)

1e-103

213) CFSAN002050_16945
( YP_008261284.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

1e-103

214) int
( YP_002381990.1 )

phage integrase

NC_011740
(Escherichia fergusonii ATCC 35469)

2e-103

215) Dda3937_00080
( YP_003883684.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

2e-103

216) EbC_39600
( YP_003743338.1 )

integrase

NC_014306
(Erwinia billingiae Eb661)

3e-103

217) SPAB_01138
( YP_001587388.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

3e-103

218) Pecwa_3419
( YP_003260764.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

3e-103

219) M621_16100
( YP_008160007.1 )

integrase

NC_021659
(Serratia plymuthica S13)

3e-103

220) KPK_1811
( YP_002237656.1 )

integrase

NC_011283
(Klebsiella pneumoniae 342)

5e-103

221) SBO_4174
( YP_410429.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

5e-103

222) int
( YP_002398182.1 )

integrase

NC_011745
(Escherichia coli ED1a)

6e-103

223) PC1_0858
( YP_003016445.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

6e-103

224) LHK_01737
( YP_002795731.1 )

CP4 integrase protein

NC_012559
(Laribacter hongkongensis HLHK9)

8e-103

225) Dd1591_1514
( YP_003003849.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

3e-102

226) SbBS512_E0979
( YP_001879655.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

3e-102

227) ST548_p7750
( YP_007386848.1 )

Integrase

NC_020181
(Enterobacter aerogenes EA1509E)

4e-102

228) plu4460
( NP_931626.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

4e-102

229) A79E_1748
( YP_006635556.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

4e-102

230) Pecwa_1693
( YP_003259087.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

4e-102

231) KOX_24355
( YP_005020825.1 )

integrase family protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

4e-102

232) CKO_00953
( YP_001452539.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

5e-102

233) A79E_1743
( YP_006635553.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

5e-102

234) KPR_3398
( YP_007992374.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

5e-102

235) SBO_1221
( YP_407678.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

1e-101

236) W5S_1636
( YP_006282600.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

9e-102

237) ROD_20671
( YP_003365620.1 )

integrase

NC_013716
(Citrobacter rodentium ICC168)

2e-101

238) int
( NP_458759.1 )

bacteriophage integrase

NC_003198
(Salmonella enterica CT18)

3e-101

239) STBHUCCB_46270
( YP_005220043.1 )

Bacteriophage integrase

NC_016832
(Salmonella enterica P-stx-12)

3e-101

240) int
( NP_807963.1 )

bacteriophage integrase

NC_004631
(Salmonella enterica Ty2)

3e-101

241) SeAg_B4773
( YP_002149406.2 )

integrase

NC_011149
(Salmonella enterica SL483)

3e-101

242) TY21A_22260
( YP_007928610.1 )

bacteriophage integrase

NC_021176
(Salmonella enterica Ty21a)

6e-101

243) int
( YP_002920242.1 )

integrase

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

7e-101

244) PPS_0628
( YP_004700093.1 )

phage integrase family protein

NC_015733
(Pseudomonas putida S16)

1e-100

245) Rahaq2_2006
( YP_005200009.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

2e-100

246) Dd1591_3717
( YP_003005999.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

3e-100

247) int
( YP_002412985.1 )

integrase

NC_011751
(Escherichia coli UMN026)

5e-100

248) KPHS_34600
( YP_005227760.1 )

integrase

NC_016845
(Klebsiella pneumoniae HS11286)

5e-100

249) CKO_00917
( YP_001452503.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

9e-100

250) ST548_p7779
( YP_007386819.1 )

Integrase

NC_020181
(Enterobacter aerogenes EA1509E)

9e-100

251) A79E_1712
( YP_006635522.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

9e-100

252) int2
( NP_993013.1 )

integrase

NC_005810
(Yersinia pestis 91001)

2e-99

253) YPA_1295
( YP_651207.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

2e-99

254) int
( YP_002346908.1 )

integrase

NC_003143
(Yersinia pestis CO92)

2e-99

255) int
( YP_005504895.1 )

integrase

NC_017154
(Yersinia pestis D106004)

2e-99

256) int
( YP_005508939.1 )

integrase

NC_017160
(Yersinia pestis D182038)

2e-99

257) y2393
( NP_669700.1 )

prophage integrase

NC_004088
(Yersinia pestis KIM)

2e-99

258) YPDSF_1208
( YP_001162577.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

2e-99

259) Entas_3110
( YP_004829618.1 )

integrase family protein

NC_015968
(Enterobacter asburiae LF7a)

2e-99

260) KPK_1842
( YP_002237686.1 )

integrase

NC_011283
(Klebsiella pneumoniae 342)

4e-99

261) PC1_0501
( YP_003016092.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

4e-99

262) Dd703_3412
( YP_002988996.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

6e-99

263) ECNA114_2039
( YP_006139140.1 )

prophage P4 integrase

NC_017644
(Escherichia coli NA114)

1e-98

264) YpAngola_A2104
( YP_001606561.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

1e-98

265) Dd1591_3537
( YP_003005827.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

1e-98

266) O3M_09700
( YP_006769591.1 )

integrase

NC_018650
(Escherichia coli 2009EL-2050)

8e-99

267) O3O_15890
( YP_006783716.1 )

integrase

NC_018661
(Escherichia coli 2009EL-2071)

8e-99

268) O3K_09735
( YP_006778644.1 )

integrase

NC_018658
(Escherichia coli 2011C-3493)

8e-99

269) int
( YP_002403247.1 )

integrase

NC_011748
(Escherichia coli 55989)

8e-99

270) int
( YP_004730693.1 )

bacteriophage integrase

NC_015761
(Salmonella bongori NCTC 12419)

8e-99

271) Dd703_3554
( YP_002989134.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

9e-99

272) Dda3937_01301
( YP_003881181.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

9e-99

273) CE10_2255
( YP_006144319.1 )

integrase

NC_017646
(Escherichia coli CE10)

3e-98

274) int
( YP_002407094.1 )

integrase

NC_011750
(Escherichia coli IAI39)

3e-98

275) NRG857_09860
( YP_006120327.1 )

integrase

NC_017634
(Escherichia coli NRG 857C)

3e-98

276) KPN2242_15195
( YP_005955494.1 )

integrase

NC_017540
(Klebsiella pneumoniae KCTC 2242)

3e-98

277) W5S_1679
( YP_006282643.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

3e-98

278) ETA_03770
( YP_001906331.1 )

P4-type integrase

NC_010694
(Erwinia tasmaniensis Et1/99)

5e-98

279) Dda3937_02713
( YP_003881328.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

5e-97

280) ECP_1962
( YP_669862.1 )

bacteriophage integrase

NC_008253
(Escherichia coli 536)

8e-97

281) ECABU_c22620
( YP_006106313.1 )

P4-like integrase

NC_017631
(Escherichia coli ABU 83972)

8e-97

282) c2449
( NP_754341.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

8e-97

283) i14_2259
( YP_006154368.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

8e-97

284) i02_2259
( YP_006149449.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

8e-97

285) ECOK1_2168
( YP_006101333.1 )

integrase/recombinase, phage integrase family

NC_017628
(Escherichia coli IHE3034)

8e-97

286) intA_3
( YP_008571925.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

8e-97

287) UM146_07190
( YP_006110343.1 )

bacteriophage integrase

NC_017632
(Escherichia coli UM146)

8e-97

288) UTI89_C2204
( YP_541203.1 )

prophage P4 integrase

NC_007946
(Escherichia coli UTI89)

8e-97

289) Rahaq2_2650
( YP_005200640.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

1e-96

290) Pecwa_1727
( YP_003259121.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

1e-96

291) intB
( YP_008115659.1 )

putative prophage P4 integrase

NC_021505
(Pseudomonas putida NBRC 14164)

4e-96

292) PputW619_4935
( YP_001751780.1 )

integrase family protein

NC_010501
(Pseudomonas putida W619)

5e-96

293) Rahaq2_1748
( YP_005199761.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

1e-95

294) int
( YP_001338304.1 )

putative phage integrase

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

9e-96

295) intB
( YP_008111337.1 )

putative prophage P4 integrase

NC_021505
(Pseudomonas putida NBRC 14164)

2e-95

296) L483_01150
( YP_008092085.1 )

integrase

NC_021491
(Pseudomonas putida H8234)

4e-95

297) Pfl01_3064
( YP_348793.1 )

Phage integrase

NC_007492
(Pseudomonas fluorescens Pf0-1)

9e-95

298) KPK_1799
( YP_002237646.1 )

integrase

NC_011283
(Klebsiella pneumoniae 342)

6e-94

299) KPN2242_20085
( YP_005956463.1 )

putative phage integrase

NC_017540
(Klebsiella pneumoniae KCTC 2242)

8e-94

300) int
( YP_001337026.1 )

putative phage integrase

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

3e-93

301) Q7S_09690
( YP_005401739.1 )

integrase family protein

NC_017047
(Rahnella aquatilis HX2)

4e-93

302) PCC21_004050
( YP_006645061.1 )

integrase

NC_018525
(Pectobacterium carotovorum PCC21)

6e-90

303) SBOV45841
( YP_008508356.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

2e-88

304) PSF113_0326
( YP_005205757.1 )

integrase

NC_016830
(Pseudomonas fluorescens F113)

4e-86

305) EC042_2207
( YP_006096513.1 )

integrase

NC_017626
(Escherichia coli 042)

6e-85

306) ETEC_2075
( YP_006115641.1 )

integrase

NC_017633
(Escherichia coli ETEC H10407)

6e-85

307) ECSF_1824
( YP_003349814.1 )

phage integrase

NC_013654
(Escherichia coli SE15)

4e-84

308) UMNK88_5213
( YP_006136842.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

6e-84

309) ECABU_c22350
( YP_006106291.1 )

site-specific recombinase

NC_017631
(Escherichia coli ABU 83972)

2e-83

310) LF82_294
( YP_002556846.1 )

Prophage P4 integrase

NC_011993
(Escherichia coli LF82)

2e-83

311) BJAB0715_03144
( YP_008218292.1 )

Integrase

NC_021733
(Acinetobacter baumannii BJAB0715)

1e-82

312) ECP_1936
( YP_669837.1 )

P4-like integrase

NC_008253
(Escherichia coli 536)

9e-83

313) c2418
( NP_754310.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

9e-83

314) i14_2235
( YP_006154344.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

9e-83

315) i02_2235
( YP_006149425.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

9e-83

316) APECO1_1051
( YP_853069.1 )

phage integrase

NC_008563
(Escherichia coli APEC O1)

3e-77

317) intA_2
( YP_008571903.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

3e-77

318) UM146_07320
( YP_006110367.1 )

putative phage integrase

NC_017632
(Escherichia coli UM146)

3e-77

319) UTI89_C2177
( YP_541179.1 )

integrase

NC_007946
(Escherichia coli UTI89)

3e-77

320) Q7A_2891
( YP_006297314.1 )

integrase

NC_017857
(Methylophaga sp. JAM1)

7e-74

321) intB
( NP_900321.1 )

prophage CP4-like integrase

NC_005085
(Chromobacterium violaceum ATCC 12472)

1e-72

322) intB
( YP_001143574.1 )

phage integrase

NC_009348
(Aeromonas salmonicida A449)

2e-72

323) amb0488
( YP_419851.1 )

integrase

NC_007626
(Magnetospirillum magneticum AMB-1)

2e-72

324) AHML_14825
( YP_008044080.1 )

phage integrase

NC_021290
(Aeromonas hydrophila ML09-119)

8e-72

325) PAU_01003
( YP_003039840.1 )

putative phage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

4e-70

326) ETAC_13020
( YP_007630085.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

1e-69

327) Dda3937_00938
( YP_003884289.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

3e-69

328) GM21_1254
( YP_003021073.1 )

integrase family protein

NC_012918
(Geobacter sp. M21)

3e-69

329) GBP346_A1152
( YP_002895874.1 )

site-specific recombinase, phage integrase family

NC_012695
(Burkholderia pseudomallei MSHR346)

5e-68

330) SEEH1578_21245
( YP_008248300.1 )

integrase

NC_021810
(Salmonella enterica 41578)

5e-68

331) CFSAN002069_19870
( YP_008252715.1 )

integrase

NC_021812
(Salmonella enterica CFSAN002069)

6e-68

332) SeHA_C2638
( YP_002046450.1 )

integrase

NC_011083
(Salmonella enterica SL476)

6e-68

333) Dd586_2842
( YP_003334387.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

1e-67

334) SU5_02989
( YP_006088602.1 )

Phage integrase, Phage P4-associated

NC_017623
(Salmonella enterica B182)

6e-68

335) int
( YP_003713510.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

3e-67

336) int4
( NP_994857.1 )

integrase

NC_005810
(Yersinia pestis 91001)

5e-67

337) A1122_00590
( YP_005519823.1 )

integrase

NC_017168
(Yersinia pestis A1122)

5e-67

338) YpAngola_A3853
( YP_001608158.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

5e-67

339) int
( YP_002345935.1 )

integrase

NC_003143
(Yersinia pestis CO92)

5e-67

340) int
( YP_005504005.1 )

integrase

NC_017154
(Yersinia pestis D106004)

5e-67

341) int
( YP_005507871.1 )

integrase

NC_017160
(Yersinia pestis D182038)

5e-67

342) YPC_0922
( YP_005622895.1 )

integrase

NC_017265
(Yersinia pestis Harbin 35)

5e-67

343) y3271
( NP_670570.1 )

integrase

NC_004088
(Yersinia pestis KIM)

5e-67

344) YPN_3086
( YP_649013.1 )

integrase

NC_008149
(Yersinia pestis Nepal516)

5e-67

345) int
( YP_003567008.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

5e-67

346) NAL212_1009
( YP_004294089.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

7e-67

347) YPDSF_0629
( YP_001162011.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

1e-66

348) YpsIP31758_0884
( YP_001399868.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-66

349) int
( YP_071664.1 )

phage integrase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

1e-66

350) YPTS_3293
( YP_001873705.1 )

integrase family protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

1e-66

351) YPK_0925
( YP_001719679.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

1e-66

352) W5S_3565
( YP_006284507.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

2e-66

353) Pcar_1823
( YP_006717564.1 )

integrase, bacteriophage P4-type

NC_007498
(Pelobacter carbinolicus DSM 2380)

2e-66

354) Gbem_3253
( YP_002140046.1 )

bacteriophage P4-type integrase

NC_011146
(Geobacter bemidjiensis Bem)

3e-66

355) MADE_1010570
( YP_004427250.1 )

integrase

NC_011138
(Alteromonas macleodii Deep ecotype)

4e-66

356) SSON53_21650
( YP_005458822.1 )

hypothetical protein

NC_016822
(Shigella sonnei 53G)

6e-66

357) YE105_C3845
( YP_004300042.1 )

putative phage integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-65

358) Galf_2041
( YP_003847811.1 )

integrase family protein

NC_014394
(Gallionella capsiferriformans ES-2)

6e-65

359) Fraau_3064
( YP_005379074.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

1e-64

360) SeHA_C4738
( YP_002048369.1 )

integrase

NC_011083
(Salmonella enterica SL476)

1e-64

361) SMD_1781
( YP_006184502.1 )

integrase

NC_017671
(Stenotrophomonas maltophilia D457)

1e-64

362) int
( YP_002399202.1 )

Integrase from prophage

NC_011745
(Escherichia coli ED1a)

1e-64

363) SN31241_7100
( YP_008358628.1 )

CP4-like integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

6e-65

364) Selin_1494
( YP_004112783.1 )

integrase family protein

NC_014836
(Desulfurispirillum indicum S5)

8e-65

365) AMBLS11_09695
( YP_006824971.1 )

prophage CP4-like integrase

NC_018692
(Alteromonas macleodii Black Sea 11)

2e-64

366) EcSMS35_3112
( YP_001745129.1 )

site-specific recombinase, phage integrase family protein

NC_010498
(Escherichia coli SMS-3-5)

5e-64

367) intB
( YP_001242175.1 )

P4-like integrase

NC_009485
(Bradyrhizobium sp. BTAi1)

6e-64

368) EcE24377A_3377
( YP_001464377.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

6e-64

369) C380_06330
( YP_006853614.1 )

phage integrase

NC_018708
(Acidovorax sp. KKS102)

8e-64

370) Dret_1610
( YP_003198472.1 )

integrase family protein

NC_013223
(Desulfohalobium retbaense DSM 5692)

8e-64

371) PC1_2870
( YP_003018435.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

1e-63

372) YPTB3886
( YP_072362.1 )

integrase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

6e-63

373) YPTS_4103
( YP_001874506.1 )

integrase family protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

6e-63

374) Rfer_1354
( YP_522619.1 )

phage integrase

NC_007908
(Rhodoferax ferrireducens T118)

3e-62

375) RSc0968
( NP_519089.1 )

cp4-like integrase

NC_003295
(Ralstonia solanacearum GMI1000)

3e-62

376) Fraau_1988
( YP_005378057.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

6e-62

377) Despr_0274
( YP_004193749.1 )

integrase family protein

NC_014972
(Desulfobulbus propionicus DSM 2032)

2e-61

378) YPK_0061
( YP_001718828.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-61

379) Alide2_0433
( YP_004386371.1 )

integrase family protein

NC_015422
(Alicycliphilus denitrificans K601)

5e-61

380) M301_2114
( YP_003675060.1 )

integrase family protein

NC_014207
(Methylotenera versatilis 301)

8e-61

381) XALc_1804
( YP_003376288.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

2e-60

382) Dsui_1791
( YP_005028016.1 )

Integrase

NC_016616
(Dechlorosoma suillum PS)

2e-60

383) PSPTO_5344
( NP_795075.1 )

site-specific recombinase, phage integrase family

NC_004578
(Pseudomonas syringae DC3000)

2e-60

384) CSSP291_04405
( YP_007439767.1 )

putative integrase

NC_020260
(Cronobacter sakazakii Sp291)

2e-60

385) ECL_03688
( YP_003614171.1 )

putative integrase

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-60

386) Mpe_A1087
( YP_001020283.1 )

prophage CP4-like integrase

NC_008825
(Methylibium petroleiphilum PM1)

3e-60

387) ELI_09990
( YP_458887.1 )

symbiosis island integrase

NC_007722
(Erythrobacter litoralis HTCC2594)

3e-60

388) P12B_c3788
( YP_006170775.1 )

Sai integrase-like protein

NC_017663
(Escherichia coli P12b)

1e-59

389) XALc_1632
( YP_003376121.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

4e-59

390) Xaut_3444
( YP_001418330.1 )

integrase family protein

NC_009720
(Xanthobacter autotrophicus Py2)

7e-59

391) Fraau_2605
( YP_005378631.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

5e-58

392) Nmul_A2184
( YP_412868.1 )

Phage integrase

NC_007614
(Nitrosospira multiformis ATCC 25196)

1e-57

393) RD1_2228
( YP_682505.1 )

CP4-like integrase

NC_008209
(Roseobacter denitrificans OCh 114)

4e-57

394) Neut_2505
( YP_748674.1 )

phage integrase family protein

NC_008344
(Nitrosomonas eutropha C91)

1e-56

395) LFML04_0012
( YP_006765226.1 )

phage integrase family protein

NC_018649
(Leptospirillum ferriphilum ML-04)

2e-56

396) XCV2217
( YP_363948.1 )

phage-related integrase

NC_007508
(Xanthomonas campestris 85-10)

3e-56

397) Tbd_2005
( YP_315763.1 )

cp4-like integrase

NC_007404
(Thiobacillus denitrificans ATCC 25259)

4e-56

398) int
( YP_007495002.1 )

Integrase

NC_020409
(Desulfovibrio piezophilus C1TLV30)

5e-56

399) AvCA_40500
( YP_007894968.1 )

Phage integrase

NC_021149
(Azotobacter vinelandii CA)

2e-55

400) AvCA6_40500
( YP_007900017.1 )

Phage integrase

NC_021150
(Azotobacter vinelandii CA6)

2e-55

401) Avin_40500
( YP_002801161.1 )

phage integrase

NC_012560
(Azotobacter vinelandii DJ)

2e-55

402) DP0425
( YP_064161.1 )

prophage integrase

NC_006138
(Desulfotalea psychrophila LSv54)

2e-55

403) DVU1527
( YP_010746.1 )

phage integrase site specific recombinase

NC_002937
(Desulfovibrio vulgaris Hildenborough)

6e-55

404) Deval_1767
( YP_005702556.1 )

integrase family protein

NC_017310
(Desulfovibrio vulgaris RCH1)

6e-55

405) NAL212_2545
( YP_004295511.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

4e-54

406) NCGM2_0360
( YP_005978635.1 )

site-specific recombinase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

9e-54

407) XBJ1_1315
( YP_003467235.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase (fragment)

NC_013892
(Xenorhabdus bovienii SS-2004)

3e-49

408) AMEC673_10230
( YP_006799117.1 )

prophage CP4-like integrase

NC_018678
(Alteromonas macleodii English Channel 673)

3e-47

409) A1S_2908
( YP_001085916.1 )

integrase

NC_009085
(Acinetobacter baumannii ATCC 17978)

3e-46

410) MCA0676
( YP_113189.1 )

phage integrase site specific recombinase

NC_002977
(Methylococcus capsulatus Bath)

3e-38

• Sequence Alignments

1) ECO103_3550 in NC_013353


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  652 bits (2465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/396 (100%), Positives = 396/396 (100%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

2) ECO103_4929 in NC_013353


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  652 bits (2465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/396 (100%), Positives = 396/396 (100%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

3) ECO111_5079 in NC_013364


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  652 bits (2465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/396 (100%), Positives = 396/396 (100%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

4) E2348C_3220 in NC_011601


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  652 bits (2465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/396 (100%), Positives = 396/396 (100%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

5) ECO26_5300 in NC_013361


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  652 bits (2465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/396 (100%), Positives = 396/396 (100%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

6) ECH74115_4272 in NC_011353


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLAL VYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

7) Z4313 in NC_002655


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLAL VYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

8) ECs3843 in NC_002695


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLAL VYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

9) ECSP_3940 in NC_013008


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLAL VYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

10) intB in NC_013941


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLAL VYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

11) ECO55CA74_17295 in NC_017656


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLAL VYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

12) CDCO157_3594 in NC_017906


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/396 (99%), Positives = 395/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLAL VYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

13) EC042_3174 in NC_017626


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  644 bits (2434),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 387/396 (98%), Positives = 394/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTRDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT+DVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

14) c5216 in NC_004431


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2429),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 389/395 (99%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI+SYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

15) int in NC_011745


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2432),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 389/395 (99%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSNELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRS+ELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRDKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANR++ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

16) EC042_4610 in NC_017626


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2430),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

17) ECP_2962 in NC_008253


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2429),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSRMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGS+MRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRERFISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

18) int in NC_011748


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2430),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

19) EcE24377A_3314 in NC_009801


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2429),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLIHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLL+HPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

20) O3M_04655 in NC_018650


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2430),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

21) O3O_21040 in NC_018661


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2430),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

22) O3K_04610 in NC_018658


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2430),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

23) UMNK88_3667 in NC_017641


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  643 bits (2430),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

24) EcolC_3878 in NC_010468


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  642 bits (2425),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 388/395 (99%), Positives = 391/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLRTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVTLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI+SYKGQPVTQLAV LNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRGMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALR MGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

25) APECO1_3534 in NC_008563


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  641 bits (2422),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/395 (98%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI+SYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

26) CE10_4872 in NC_017646


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  641 bits (2422),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/395 (98%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI+SYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

27) int in NC_011742


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  641 bits (2422),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/395 (98%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI+SYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

28) int in NC_011750


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  639 bits (2415),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI+SYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWRADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQW+ADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

29) ROD_50201 in NC_013716


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  638 bits (2412),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTIKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTT+KRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLNANREKCISPFDYAKINNPLK  420
            EERRLMLQWWADFL+ANRE+ ISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

30) ECO111_3718 in NC_013364


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  638 bits (2413),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/396 (98%), Positives = 393/396 (99%), Gaps = 2/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKR--ARKLISEGIDPCEQK  83
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKR  ARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  84   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  143
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  144  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  203
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  204  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  263
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  264  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  323
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  324  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  383
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  384  EERRLMLQWWADFLDANREKFISPFEYAKINNPLKQ  419
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

31) int in NC_011750


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/396 (97%), Positives = 392/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI+SYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVP+SKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

32) ECO26_4069 in NC_013361


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/396 (97%), Positives = 394/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYANVNNPLRR  421
            EERRLMLQWWADFLDANRE+ ISPFEYA++NNPL++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

33) ETEC_4481 in NC_017633


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  635 bits (2399),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/396 (97%), Positives = 393/396 (99%), Gaps = 0/396 (0%)

Query  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  60
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  180
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  300
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDANREQCISPFEYAKINNPLRR  396
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPL++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

34) ECED1_3430 in NC_011745


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  634 bits (2396),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/395 (98%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREQCISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

35) EcolC_0747 in NC_010468


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  632 bits (2387),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 391/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGLPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKG PVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREQCISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

36) ETEC_3157 in NC_017633


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  632 bits (2389),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/395 (98%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  120
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360
            ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDANREQCISPFEYAKINNPLK  395
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

37) c3556 in NC_004431


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  632 bits (2390),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 383/396 (97%), Positives = 390/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRINSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERKP  265
            LSRLPELLSRI SYKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER P
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

38) ECABU_c32560 in NC_017631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/396 (97%), Positives = 391/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

39) int in NC_008563


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/396 (97%), Positives = 391/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

40) i14_3273 in NC_017652


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/396 (97%), Positives = 391/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

41) i02_3273 in NC_017651


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/396 (97%), Positives = 391/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

42) int in NC_017644


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/396 (97%), Positives = 391/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

43) CE10_3417 in NC_017646


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/396 (97%), Positives = 391/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

44) ECS88_4720 in NC_011742


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/396 (97%), Positives = 391/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

45) ECUMN_3322 in NC_011751


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  627 bits (2370),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 381/396 (97%), Positives = 390/396 (99%), Gaps = 0/396 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAE KQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAELEP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE EP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFS RGSKMRTPHLVPLS+Q VAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTT++VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLKR  421
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK+
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

46) int in NC_011748


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  613 bits (2316),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDN+MWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

47) O3M_22875 in NC_018650


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  613 bits (2316),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDN+MWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

48) O3K_22970 in NC_018658


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  613 bits (2316),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDN+MWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

49) SFxv_3245 in NC_017328


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  613 bits (2316),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDN+MWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

50) S4822 in NC_004741


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  613 bits (2316),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDN+MWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

51) SF2964 in NC_004337


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  613 bits (2316),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            R KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            LSRLPELLSRI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEIDIDN+MWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDTTQ+VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

52) S70_06120 in NC_017731


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  554 bits (2090),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 307/396 (78%), Positives = 373/396 (95%), Gaps = 0/396 (0%)

Query  26   LHLLVHSNGSKYWRLRYRHLGKEKTLALGLYPDVSLSEARLKRDEARKLIADGIDPCEQK  85
            + LLVH+NGS+YWRLRYR LGKEKTLALG+YP+VSLSEAR KRDEARKLI++G+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVAKAASDANLSFETIARQWHASNKKWSESHSEKVLKSLESHVFPYIGLRDITTLKTPDL  145
            R  K  +D +LSFE IAR+WHASNK+W++SHS+KVLKSLE+HVFP+IG RDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPIRAAESKEIYEIAARLQQRIAAVMRYAVQSGIIGYNPAIDTAGAVTTVQRQHRPALN  205
            LIP+RAAE+K+IYEIA+RLQQRI+AVMRYAVQSGII YNPA+D AGA+TTV+RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LDRLPELITRIDAYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDFDKALWTIPAQRKP  265
            L RLPEL++RI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEID+D+A+WTIPA+R P
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKFSHRGAKMRTPHLVPLSHQAITILKEIWAWTGEHELILTGAHNPFKPMSENTVNK  325
            +PGVKFSHRG+KMRTPHLVPLS Q ++IL E+ +W+GE+ LI+TGAH+P KP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKTEICGHGFRTMACSSLVESGLWSKDAVERQMSHQERNSVRAAYIHKAEHI  385
            ALRVMGYDT  ++CGHGFR+MACS+L+ESGLWS+DAVERQMSHQERN+VRAAYIHKAEH+
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DQRRLMVQWWADYLDANREQTISPFDFAKLNNPMNH  421
            ++RRLM+QWWAD+LDANRE+ ISPF++AK+NNP+++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

53) S70_13465 in NC_017731


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  554 bits (2090),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 308/396 (78%), Positives = 372/396 (94%), Gaps = 0/396 (0%)

Query  26   LHLLVHTNGSKYWRLRYRHLGKEKTLALGLYPDVSLSEARLKRDEARKLIADGIDPCEQK  85
            + LLVH NGS+YWRLRYR LGKEKTLALG+YP+VSLSEAR KRDEARKLI++G+DPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RVAKAASDANLSFETIARQWHASNKKWSESHSEKVLKSLESHVFPYIGLRDITTLKTPDL  145
            R  K  +D +LSFE IAR+WHASNK+W++SHS+KVLKSLE+HVFP+IG RDITTL+TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPIRAAESKEIYEIAARLQQRIAAVMRYAVQSGIIGYNPAIDTAGAVTTVQRQHRPALN  205
            LIP+RAAE+K+IYEIA+RLQQRI+AVMRYAVQSGII YNPA+D AGA+TTV+RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LDRLPELIARIDAYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDFDKALWTIPAERKP  265
            L RLPEL++RI++YKGQPVT+LAVMLNLLVFIRSSELRYARWSEID+D+A+WTIPAER P
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKFSHRGAKMRTPHLVPLSHQAITILKEIWAWTGEHELILTGAHNPFKPMSENTVNK  325
            +PGVKFSHRG+KMRTPHLVPLS Q ++IL E+ +W+GE+ LI+TGAH+P KP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKTEICGHGFRTMACSSLVESGLWSKDAVERQMSHQERNSVRAAYIHKAEHI  385
            ALRVMGYDT  ++CGHGFR+MACS+L+ESGLWS+DAVERQMSHQERN+VRAAYIHKAEH+
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DQRRLMVQWWADYLDANREQTISPFDFAKLNNPMNH  421
            ++RRLM+QWWAD+LDANRE+ ISPF++AK+NNP+++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

54) YpsIP31758_0809 in NC_009708


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  519 bits (1957),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 296/389 (77%), Positives = 342/389 (88%), Gaps = 0/389 (0%)

Query  26   MHLLVHPNGSKYWRLRYRYLGKENTLALGVYPALSLSEARAKRDAARKLIAEGSDPSEVK  85
            M LLVHPNGS+YWRLRYR LGKE+TLALGVYP +SLSEAR+KRD ARKLI+EG DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKALPDATQTFEVIARRWHAANKQWSEQHSAKVLKNLEMYLFPVNGTRDIASLRTPDL  145
            RAKK +PD   +FE IARRWHA+NKQW++ HS KVLK+LE  +FP  G RDI++L TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPIRVAENAGFLEVSARLLQRTTAIMRYAVQCGIIDYNPAQDMVGALTTVKRVHRPALE  205
            LIP+R AE   + E+++RL QR +A+MRYAVQ GII YNPA DM GALTTVKR HRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LNRIPELLSRIEGYKGQPLTRLAVMLNLFVFIRSSELRYARWSEIDTERALWTIPAEREP  265
            L+R+PELLSRI +YKGQP+T+LAVMLNL+VFIRSSELRYARWSEID + A+WTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKFSHRGSKMRTTHLVPLSQQSLAMLEELRLSGGESGLIFPGDHDPRKPISENTINK  325
            +PGVKFSHRGSKMRT HLVPLS+Q +A+L EL+  +GE+GLIF G HDPRKPISENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRLMGYETKTEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEFL  385
            ALR+MGY+T  +VCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE L
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDTNREIAVSPFDFAK  414
            +ERRLMLQWWADFLD+NRE  +SPF++AK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

55) EAE_09085 in NC_015663


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  518 bits (1955),  Expect = 2e-148, Method: Compositional matrix adjust.
 Identities = 303/392 (78%), Positives = 357/392 (92%), Gaps = 0/392 (0%)

Query  26   MFLLVHPNGSRYWRLRYRFLGKEKTLALGVYPEVSLSEAREKRDTARKLIAEGTDPCEHK  85
            MFLLVHPNGSRYWRLRYR+LGKEKTLALGVYPEVSLSEAR KRD ARKLI+EG DPCE+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RIKKSVPETAQTFEGIARQWHKSNKKWSDSHSEKILKSLETHVFPFIGSRDITTLRTPDL  145
            R KK VP+   +FE IAR+WH SNK+W++SHS+K+LKSLETHVFPFIG+RDITTL TPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LVPVkaaeakeiyeiaaRLQQRITAIMRYAAQSGIITYNPAVDMAGALTTVKRQHRPALA  205
            L+PV+AAEAK+IYEIA+RLQQRI+A+MRYA QSGII YNPA+DMAGALTTVKRQHRPAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LNRISELLERLDAYRGQPLTRLATKLTLLIFIRSSELRFARWSEIDFKKAMWTIPPERKP  265
            L+R++ELL R+++Y+GQP+T+LA  L LL+FIRSSELR+ARWSEID+ +AMWTIP+ER P
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IEGVKYSHRGSKMRTEHLVPLSTQALDILQQIHTISGEYELIFTGDHNPWKPMSENTVNN  325
            + GVK+SHRGSKMRT HLVPLS Q + IL +++T +GE  LIFTG H+P+KP+SENTVN+
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRLMGYDTKIDVCGHGFRAMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEFL  385
            ALR+MGYDT  DVCGHGFRAMACS+LIESGLWSRDAVERQMSHQERNGVRAAYIHKAE L
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANEEKTVSPFDFAKLHS  417
            +ERRLMLQWWADFLDAN E+ +SPF++AK+++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINN  392

56) SbBS512_E4662 in NC_010658


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  488 bits (1839),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 294/301 (98%), Positives = 298/301 (99%), Gaps = 0/301 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRATEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRA+EAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNA  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISEN +N 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  S  326
            +
Sbjct  301  A  301

57) SSON53_18230 in NC_016822


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  487 bits (1838),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 294/301 (98%), Positives = 298/301 (99%), Gaps = 0/301 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSNKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHS+KVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNA  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISEN +N 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  S  326
            +
Sbjct  301  A  301

58) D782_3965 in NC_020063


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  487 bits (1835),  Expect = 6e-139, Method: Compositional matrix adjust.
 Identities = 262/391 (68%), Positives = 337/391 (87%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFDGKQKMLALGVYPDVSLADARTRREEARKLVANGIDPGDKK  85
            M LLVHPNGS+YWRL+YR+ GK+K LALGVYP+VSL++ART+R+EARKL+++G+DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQEDARTFEQLAIEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNITELKTRDL  145
            +  KV  +   +FE++A  WHA+NK+W++ HS +VLKSLE ++FP IG+R+IT L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKVVELSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASSNRQHRPALE  205
            L P++  E     E+ASRLQQR +A+MRYAVQSG++ YNPA +M GA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRTPELLQRIGSYTGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETSMWTIPAEREA  265
            L R PELL RIGSY G+P+T+LAV L LLVFIRSSELR+ARWSEID++ +MWTIPAERE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSRQALEILEQIKTFSGDHELIFIGDHNPRKPMSENTVNK  325
            + GVK S+RGSKMRTPHLVPLS+Q + IL +++T +G++ LIF G H+PRKP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  SLRVMGYDTQVEVCGHGFRTMACSSLIESGLWSRDAVERLMSHMERNSVRAAYIHKAEHL  385
            +LRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVER MSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKAVSPFDFAKLG  416
            +ER+LMLQWWADFLDANRE+ +SPF++AK+ 
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKIN  391

59) SBO_4322 in NC_007613


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  486 bits (1833),  Expect = 6e-139, Method: Compositional matrix adjust.
 Identities = 294/301 (98%), Positives = 297/301 (99%), Gaps = 0/301 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LSRLPELLSRIGSYKGQTVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            LSRLPELLSRIGSYKGQ VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNA  325
            LPGVKFSHRGSKMRTPHLVPLSKQ VAIL+ELQTWAGENGLIFTGAHDPRKPISEN +N 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  S  326
            +
Sbjct  301  A  301

60) EcSMS35_4753 in NC_010498


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  485 bits (1827),  Expect = 2e-138, Method: Compositional matrix adjust.
 Identities = 265/396 (67%), Positives = 342/396 (87%), Gaps = 0/396 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELSLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A  L+LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

61) intB in NC_011748


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  484 bits (1825),  Expect = 3e-138, Method: Compositional matrix adjust.
 Identities = 265/396 (67%), Positives = 342/396 (87%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWATELSLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A  L+LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDANREKFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLDANRE+FISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

62) CFSAN001992_11535 in NC_020307


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  484 bits (1823),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 267/390 (69%), Positives = 341/390 (88%), Gaps = 1/390 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLADARSRRDEARKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLYRIDHYSGRPLTRFAVELMLLVFIRSSELRFARWTEVDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T++AV L LLVFIRSSELR+ARW+E+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
            PL GVK S+RGSKMRTPHLVPLS+Q +AIL  +++  G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREIGVSPFDFGK  415
            L ERRLMLQWWAD+LDANRE  +SPF+++K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

63) APECO78_02320 in NC_020163


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  484 bits (1823),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 341/396 (87%), Gaps = 0/396 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEAR+L+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

64) CE10_5017 in NC_017646


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  484 bits (1823),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 341/396 (87%), Gaps = 0/396 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEAR+L+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  421
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

65) EcDH1_3727 in NC_017625


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  483 bits (1820),  Expect = 8e-138, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

66) intB in NC_017638


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  483 bits (1820),  Expect = 8e-138, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

67) intB in NC_010473


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  483 bits (1820),  Expect = 8e-138, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

68) intB in NC_007779


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  483 bits (1820),  Expect = 8e-138, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

69) intB in NC_011751


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  483 bits (1820),  Expect = 8e-138, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

70) intB in NC_012971


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 263/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDE+RKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

71) intB in NC_012892


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 263/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDE+RKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

72) ECBD_3766 in NC_012947


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 263/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDE+RKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

73) intB in NC_012967


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 263/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDE+RKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

74) intB in NC_011745


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 341/396 (87%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEAR+L+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLAKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

75) ETEC_4611 in NC_017633


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 341/396 (87%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEAR+L+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

76) intB in NC_011750


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 264/396 (67%), Positives = 341/396 (87%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEAR+L+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

77) intB in NC_017663


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 263/396 (67%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDE+RKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            L R+PELL++I+SY G+P+T+ A+ L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+L+ESGLWSRDAVERQMSH  RN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ  396
            EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

78) KO11_23100 in NC_017660


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 268/396 (68%), Positives = 343/396 (87%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL +AR +RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQ+ +A++R+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            +L+R+PELL RI  Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D+D AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            PL GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR   I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

79) EKO11_4021 in NC_016902


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 268/396 (68%), Positives = 343/396 (87%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL +AR +RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQ+ +A++R+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            +L+R+PELL RI  Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D+D AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            PL GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR   I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

80) LY180_22530 in NC_022364


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 268/396 (68%), Positives = 343/396 (87%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL +AR +RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQ+ +A++R+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            +L+R+PELL RI  Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D+D AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            PL GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR   I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

81) ECW_m4652 in NC_017635


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 268/396 (68%), Positives = 343/396 (87%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL +AR +RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQ+ +A++R+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            +L+R+PELL RI  Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D+D AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            PL GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR   I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

82) WFL_22655 in NC_017664


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 268/396 (68%), Positives = 343/396 (87%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL +AR +RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQ+ +A++R+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            +L+R+PELL RI  Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D+D AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            PL GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR   I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

83) Ser39006_0951 in NC_022268


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  479 bits (1805),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 260/390 (67%), Positives = 336/390 (87%), Gaps = 1/390 (0%)

Query  26   MFLLVHPNGSKYWRFRFRFGGKQHLMAFGVYPEVSLADARQKREAARKLVAAGIDPREQK  85
            MFLLVHPNGS+YWR+R+R+ GK+  +A+GVYPEVSL++AR KR+ ARKL++ G+DP EQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVQEEQAKAVFTFEFVAREWHATNKKWSEEHSRRVLKSLEDNLFSAIGKRNVAELKTRD  145
            RA +   +   ++FE +AR WHA+NK+W++ HS +VLKSLE ++F+ IG+R+++ L+T D
Sbjct  61   RA-KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLAPIKTVEQSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LL P+++ E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRTPELLQRIDSYTGRPLTRLSVELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R PELL RI+SY G+P+T+L+V L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIEGVKHSHRGSKMRTPHLVPLSRQALVILKQIQQVSGDHELIFIGDHNPRKPMSENTVN  325
            P+ GVK SHRGSKMRTPHLVPLS+Q + IL ++Q  +G++ LIF G H+PRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  NALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  385
            +ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADFLDANREKGVSPFDFGK  415
            L+ERRLMLQWWADFLDANRE+ +SPF+++K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

84) H650_18245 in NC_021500


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  478 bits (1802),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 264/393 (68%), Positives = 338/393 (87%), Gaps = 1/393 (0%)

Query  26   MFLLIHPNGSIYWRFRFRFGGKQHLMAFGVYPETSLADARQKREEARKLVAAGVDPREHK  85
            MFLL+HPNGS YWR+R+R+ GK+  +A+GVYPE SL++AR KR+EARKL++ GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEVITFESVARDWHASNQKWSESHSGRVLKSLEDNLFDAIGKRNIAELKTRD  145
            RA K     + ++FE +AR WHASN++W++SHS++VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVEMSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LLIP++A E     E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDTYTGRPLTRLAVELTLLVFIRSSELRFARWSEVDFEIAMWTIPGERE  265
            +L+R+PELL RI++Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLVPLSSQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHLVPLS Q ++IL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMVQWWADYLDVNREKGISPFDFGKKNG  418
            L ERRLM+QWWAD+LD NRE+ ISPF+++K N 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINN  392

85) i14_4873a in NC_017652


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  477 bits (1799),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 261/396 (66%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWHSTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGSHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYANVNNPLRR  421
            EERRLMLQWWADFLDANRE+ ISPFEYA++NNPL++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

86) i02_4873a in NC_017651


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  477 bits (1799),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 261/396 (66%), Positives = 340/396 (86%), Gaps = 0/396 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWHSTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGSHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYANVNNPLRR  421
            EERRLMLQWWADFLDANRE+ ISPFEYA++NNPL++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

87) ECP_4521 in NC_008253


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  476 bits (1796),  Expect = 7e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

88) ECABU_c48360 in NC_017631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  476 bits (1795),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFDYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

89) UM146_21610 in NC_017632


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  476 bits (1795),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFDYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

90) KO11_22995 in NC_017660


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  475 bits (1789),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 259/392 (67%), Positives = 333/392 (85%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I++Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            P+PGVK+S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRER I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

91) EKO11_4043 in NC_016902


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  475 bits (1789),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 259/392 (67%), Positives = 333/392 (85%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I++Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            P+PGVK+S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRER I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

92) LY180_22420 in NC_022364


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  475 bits (1789),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 259/392 (67%), Positives = 333/392 (85%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I++Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            P+PGVK+S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRER I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

93) intB in NC_007946


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 261/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVAPGDKK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GV P ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFDYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

94) WFL_22550 in NC_017664


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  475 bits (1789),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 259/392 (67%), Positives = 333/392 (85%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I++Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            P+PGVK+S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRER I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

95) EBL_c34780 in NC_017910


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  472 bits (1780),  Expect = 1e-134, Method: Compositional matrix adjust.
 Identities = 267/396 (68%), Positives = 344/396 (87%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSTSHSARVLKSLEDNLFASVGKRNIKDIGTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ +G+R+I  + T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVEKSGRLEVAARLQQRTTAIMRFAVQNGLIDYNPAQEIAGAIATAKRKHRAAL  205
            LL+P++A E     E+A+RLQQR +A+MR+AVQ+G+I YNPA ++AGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  DLNRIPELLHRIDNYTGRPLTRLAVDLTLLVFIRSSELRFARWTEVDFETAMWTIPGERE  265
            DL+R+PELL RI++Y G+P+T+LAV L LLVFIRSSELR+ARW+E+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
            PL GVK S+RGSKMRTPHLVPLS+Q +AIL  +++  G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT ++VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREKGVSPFDFGNNGNVLK  421
            L ERRLMLQWWAD+LDANRE+ +SPF++++  N LK
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

96) ECA2879 in NC_004547


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  472 bits (1780),  Expect = 1e-134, Method: Compositional matrix adjust.
 Identities = 261/390 (67%), Positives = 329/390 (85%), Gaps = 1/390 (0%)

Query  26   MFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVSLSEARQKRDEARKLISAGVDPNEHK  85
            MFLLVH NGS+YWRLRYR  GKEKTLALGVYPEVSLSEAR KRDEARKLIS GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKTQQQDDEQTFEAVARAWHTDNKKWSESHAERILKSLSDNIFPAIGGTHVANLKTRD  145
            +A K    D + +FE +AR WH+ NK+W++SH++++LKSL  ++FP IG  +++ L+T D
Sbjct  61   RA-KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQNGLIDYNPAQDMAGAIMPGKVEHRPAL  205
            LL P+++ E     E+A RL+QR++A+M YAVQ+G+I YNPA DMAGA+   K +HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELDRLPELLGRIDGYKGREFTKWVINLSLLIFIRSSELRFARWPEIDFERSLWTIPPERE  265
            +L RLPELL+RI++YKG+  T+  + L+LL+FIRSSELR+ARW+EID++ ++WTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKFSERGSKMHTPHLVPLSRQALEILKKIREVSGHCELVFIGDHSSRKPVSEGTVN  325
            P+PGVKFS+RGSKM+TPHLVPLS+Q + IL  ++  +G+  L+F G H +RKP+SE TVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALQTMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  385
            KAL+ MGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADFLDANRERAISAFDFAK  415
            L+ERRLMLQWWADFLDANRER IS+F++AK
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

97) Entcl_3878 in NC_014618


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  471 bits (1776),  Expect = 2e-134, Method: Compositional matrix adjust.
 Identities = 260/390 (67%), Positives = 336/390 (87%), Gaps = 1/390 (0%)

Query  26   MFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETSLADARQKREEARKLVAAGIDPREHK  85
            MFLL+HPNGS+YWR+R+R+ GK+  +A+GVYPE SL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEQQAKENITFESVAREWHAANKKWSEEHSRRVLKSLEDNLFPAIGKRSIDSFSTRD  145
            RA K   +  +++FE +AR WHA+NK+W++ HS +VLKSLE ++FP IG+R I +++T D
Sbjct  61   RA-KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKVVEATGRLEVASRLQQRTNAIMRYAVQSGLIDYNPAQEMAGAVASSNRVHRPAL  205
            LL+P++  EA    E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +R HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRLPELLHRIDSYTGRPLTRLAVELTLLIFIRSSELRFARWSEIDFERAMWTIPAERE  265
            +L RLPELL RI+SY G+P+T+LAV L LL+FIRSSELR+ARWSEID++ AMWTIPAERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIEDVKHSQRGSKMRTPHLVPLSRQALAILKQVHKLSGERDFVFIGDHNPLKPMSENTVN  325
            ++ +VK S+RGSKMRTPHLVPLS+Q +AIL +++  +GE +++F G H+P KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVDVCGHGFRAMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  385
            KALRVMGYDT  DVCGHGFRAMACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADLLDVNREREVSPYDFGK  415
            L+ERRLMLQWWAD+LD NRER +SP++++K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

98) YPK_3676 in NC_010465


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  470 bits (1773),  Expect = 4e-134, Method: Compositional matrix adjust.
 Identities = 275/396 (70%), Positives = 345/396 (88%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEISLadararrdearKLLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARKL+++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLVPLSRQALAILGKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHLVPLS+Q +AIL+ +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADDLDANRQQAISPFDYAKVNNLFK  421
            L+ERRLM+QWWAD LDANR++ ISPF+YAK+NN +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

99) PAGR_g3659 in NC_017554


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  470 bits (1773),  Expect = 4e-134, Method: Compositional matrix adjust.
 Identities = 269/392 (69%), Positives = 341/392 (87%), Gaps = 1/392 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAAKVEQEQEAITFEVVAREWHASNQKWSASHSARVLKSLEDNLFDAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWTEVDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARW+E+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMKTPHLVPLSRQAVAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
            PL GVK S+RGSKM+TPHLVPLS+Q VAIL  +++  G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGVRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHG R+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADYLDANRVKGISPFDFSKNN  417
            L+ERRLMLQWWAD+LDANR + ISPF+++K N
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

100) ECENHK_02620 in NC_018405


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1767),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 266/390 (69%), Positives = 341/390 (88%), Gaps = 1/390 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFASIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  LLEGVKHSQRGSKMRTPHLIPLSRQALTILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
             L GVK S+RGSKMRTPHL+PLS+Q ++IL  +++  G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREKVVSPFDFAQ  415
            L ERRLMLQWWAD+LDANRE+ +SPF++A+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

101) YpAngola_A4051 in NC_010159


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVSTGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

102) EAM_3037 in NC_013971


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1768),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 341/395 (87%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANSIDPGDKK  85
            M LLVHPNGSRYWRL+YR+ GK+K LALGVYP+VSL++AR++RDEARKL+++++DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQEEARTFEELAVEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            +  KV  +   +FE++A  WHA+NK+W++ HS +VLKSLE ++FP IG+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASSNRQHRPALE  205
            L P++A E     E+ASRLQQR +A+MRYAVQSG++ YNPA +M GA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRTPELLQRIDSYTGRPLTCLAVELTLLVFIRSSELRFARWSEIDFETSMWMIPAEREA  265
            L R PELL RI+SY G+P+T LAV L LLVFIRSSELR+ARWSEID++ +MW IPAERE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSRQALAILEQIKTFSGDHELIFIGDHNPRKPMSENTVNK  325
            + GVK S+RGSKMRTPHLVPLS+Q +AIL +++T +G++ LIF G H+PRKP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  SLRVMGYDTQIEVCGHGFRTMACSSLIESGLWSRDAVKRQMSHMERNSVRAAYIHKAEHL  385
            +LRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAV RQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKAVSPFDFAKINTSIK  420
            +ER+LMLQWWADFLDANRE+ +SPF++AKIN ++K
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

103) intB in NC_013961


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1768),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 341/395 (87%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANSIDPGDKK  85
            M LLVHPNGSRYWRL+YR+ GK+K LALGVYP+VSL++AR++RDEARKL+++++DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQEEARTFEELAVEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            +  KV  +   +FE++A  WHA+NK+W++ HS +VLKSLE ++FP IG+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASSNRQHRPALE  205
            L P++A E     E+ASRLQQR +A+MRYAVQSG++ YNPA +M GA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRTPELLQRIDSYTGRPLTCLAVELTLLVFIRSSELRFARWSEIDFETSMWMIPAEREA  265
            L R PELL RI+SY G+P+T LAV L LLVFIRSSELR+ARWSEID++ +MW IPAERE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSRQALAILEQIKTFSGDHELIFIGDHNPRKPMSENTVNK  325
            + GVK S+RGSKMRTPHLVPLS+Q +AIL +++T +G++ LIF G H+PRKP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  SLRVMGYDTQIEVCGHGFRTMACSSLIESGLWSRDAVKRQMSHMERNSVRAAYIHKAEHL  385
            +LRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAV RQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKAVSPFDFAKINTSIK  420
            +ER+LMLQWWADFLDANRE+ +SPF++AKIN ++K
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

104) A225_0566 in NC_018106


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1767),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 259/395 (66%), Positives = 335/395 (85%), Gaps = 1/395 (0%)

Query  26   MSLLVKPNGSKYWRFRFRFGGKQHLMAFGVYPEISLANARKKREEARKLVAAGIDPREHK  85
            M LLV PNGS+YWR+R+R+ GK+  +A+GVYPE+SL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RALKEEQAKEIITFEKVAREWLATNQKWSEDHANRVKKSLEDNIFPAIGTCNIAELGTRD  145
            RA K     ++ +FE +AR W A+N++W++ H+++V KSLE ++FP IG  +I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLAPIKAVEVSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASGNRQHRPAL  205
            LL P++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I++Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            P+PGVK S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWANFLDANREKSISPFDFAKINNPM  420
            L+ER+LMLQWWA+FLDANRE+ ISPF++AKINNP+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPL  394

105) A1122_08715 in NC_017168


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

106) YPA_2939 in NC_008150


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

107) intB in NC_003143


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

108) intB in NC_017154


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

109) intB in NC_017160


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

110) YPN_0651 in NC_008149


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

111) intB in NC_014029


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

112) Dd586_0394 in NC_013592


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  469 bits (1766),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 263/391 (68%), Positives = 339/391 (87%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANGTDPGDKK  85
            M LLVHPNGS+YWRL+YR+ GK+K LALGVYP+VSL++AR++RDEARKL+++G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KSDKVEQSEALTFKEVAIEWHSTNKKWSQEHSHRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            ++ KV     L+F ++A  WH++NK+W+Q HS++VLKSLE ++FP IG+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEQSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALD  205
            L P++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKHTPELLRRIDNYTGRPLTRLAVELTLLIFIRSSELRFARWSEIDFDTALWTIPPEREP  265
            L + PELL RI++Y G+P+T+LAV L LL+FIRSSELR+ARWSEID+D A+WTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IDGVKHSHRGSKMRTPHLVPLSRQALATLKQIQQFSCDHELIFIGDHDPRKPMSENTVNK  325
            + GVK SHRGSKMRTPHLVPLS+Q +A L ++Q  + ++ LIF G HDPRKP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKVVSAFDFGKVS  416
            +ER+LMLQWWADFLDANRE+ +S+F+++K++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKIN  391

113) H650_18115 in NC_021500


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  468 bits (1765),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 267/390 (69%), Positives = 343/390 (88%), Gaps = 1/390 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPTENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAIIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F++IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFAHWSEVDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+A+WSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMKTPHLVPLSQQALAILEKIKSMNGNRDLIFVGDHDPRKPMSENTVN  325
            PL GVK S+RGSKM+TPHLVPLS+Q +AIL  +++  G+ +LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREIGVSPFDFGK  415
            L ERRLMLQWWAD+LDANRE  +SPF+++K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

114) intB in NC_005810


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  468 bits (1765),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  38   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  97
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  98   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  157
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  158  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  217
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  218  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  277
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  278  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  337
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  338  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  397
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  398  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  431
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

115) intB in NC_004088


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  468 bits (1765),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 269/394 (69%), Positives = 342/394 (87%), Gaps = 1/394 (0%)

Query  38   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  97
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  98   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  157
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  158  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  217
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  218  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  277
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  278  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  337
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  338  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  397
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  398  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  431
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

116) CFSAN002050_05850 in NC_021818


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  467 bits (1760),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 255/393 (65%), Positives = 335/393 (86%), Gaps = 1/393 (0%)

Query  26   LFLLVHANGSKYWRFRFRFGGKQHVMAFGVYPEVSLADARKKREEARKLVAAGIDPRAHK  85
            +FLLVH+NGS+YWR+R+R+ GK+  +A+GVYPEVSL++AR KR+EARKL++ G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVARDWLATNQKWSEDHAERVKKSLEDNVFPAIGTRNIAELSTRD  145
            RA K     ++ +FE +AR W A+N++W++ H+++V KSLE +VFP IG R+I+ L+T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLLPIKAVETSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASGNRKHRPAL  205
            LL+P++A E+    E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +R+HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ALKRIPELLQKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
             L R+PELL +I++Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPDVKHSHRGSKMHTPHLVPLSKQALAILKQIKQFCGKHELIFIGDHDPRKPMSENTVN  325
            P+P+VK SHRGSKM+TPHLVPLSKQ +AIL +++   G + LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEF  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  IDERKLMLQWWADFLDANREKGITPFDYAKINQ  418
            ++ER+LMLQWWADFLDANRE+ I+PF+YAKIN+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINN  392

117) YPDSF_3248 in NC_009381


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  466 bits (1755),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 268/394 (69%), Positives = 341/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRHRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLR R+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

118) intB in NC_017265


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  465 bits (1754),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 268/394 (69%), Positives = 341/394 (87%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWYASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            +A KV  + + ++FE +AR W ASN+QW+++HS +VLKSLE ++F  IG+R+I+ L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     ++ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHL+PLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANRE+ +SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

119) SbBS512_E4814 in NC_010658


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  465 bits (1754),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 255/392 (66%), Positives = 331/392 (85%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEEHANRVKKSLEDNIFPAIGSHNIAELGTRD  145
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG+++I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  205
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLQKIDEYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I+ Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKHSQRGAKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENTVN  325
            P+PGVK S+RG+KMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDP KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANREKGITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRE+ I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

120) EC042_4741 in NC_017626


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  465 bits (1751),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 254/390 (66%), Positives = 332/390 (86%), Gaps = 1/390 (0%)

Query  26   MFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETSLADARQKREEARKLVAAGIDPREHK  85
            MFLL+HPNGS+YWR+R+R+ GK+  +A+GVYPE SL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQTKEAITFESVAREWHAVNKKWTEEHSRRVLKSLEDNLFPAIGKRSIDSFSTRD  145
            RA K     + ++FE +AR WHA NK+W++ HS +VLKSLE ++FP IG+R I +++T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKVVEATGRLEVASRLQQRTNAIMRCAVQSGLIDYNPAQEMAGAVASSNRVHRPAL  205
            LL+P++  EA    E+ASRLQQR +A+MR AVQSG+I YNPA +MAGA+++ +R HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRLPELLQRIDSYSGRPLTRLAVELTLLIFIRSSELRFARWPEIDFERAMWTIPAERE  265
            +L RLPELL RI+SY G+P+T+LAV L LL+FIRSSELR+ARW+EID++ AMWTIPAERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIEGVKHSERGSKMRTPHLVPLSRQALAILKQVHKLSGERDFVFVGDHNPCKPMSENTVN  325
            ++ GVK S+RGSKMRTPHLVPLS+Q +AIL +++  +GE +++F G H+P KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKIEVCGHGFRTMACSSLIESGLWSRNAVERQMSHMERNSVRAAYIHKAQH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSR+AVERQMSH ERN+VRAAYIHKA+H
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKMMLQWWADFLDVNRVKGVSPFDFAK  415
            L+ER++MLQWWADFLD NR + +SPF++AK
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

121) intB in NC_007613


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  465 bits (1752),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 255/392 (66%), Positives = 331/392 (85%), Gaps = 1/392 (0%)

Query  1    MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  60
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  61   RAVKEEQAKEIITFEKVAREWLVTNQKWSEEHANRVKKSLEDNIFPAIGSHNIAELGTRD  120
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG+++I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  121  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  180
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  181  ELKRIPELLQKIDEYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  240
            +L R+PELL +I+ Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  241  PIPGVKHSQRGAKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENTVN  300
            P+PGVK S+RG+KMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDP KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  301  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  360
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  361  LDERKLMLQWWADFLDANREKGITPFDYAKIN  392
            L+ER+LMLQWWADFLDANRE+ I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

122) Ent638_0463 in NC_009436


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  464 bits (1750),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 265/391 (68%), Positives = 337/391 (87%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANSIDPGDKK  85
            M LLVHPNGSRYWRL+YR+ GK+K LALGVYP+VSL++AR++RDEARKL+++++DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQEEARTFEQLAVEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            +  KV  +   +FE++A  WHA+NK+W++ HS +VLKSLE ++FP IG+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALE  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLEKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREP  265
            L R+PELL +I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSHRGSKMRTPHLVPLSKQALEILRQIKHFCGEYELIFIGDHDPRKPMSENTVNS  325
            +PGVK SHRGSKMRTPHLVPLSKQ + IL +++   GE  LIF G HDPRKP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKGITPFDYAKIN  416
            +ER+LMLQWWADFLDANRE+ I+PF+YAKIN
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKIN  391

123) intB in NC_016514


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  464 bits (1749),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 258/391 (66%), Positives = 340/391 (87%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVSLadararrddarKLLANSIDPGDKK  85
            M LLVHPNGS+YWRL+YR+ GK+K LALGVYP+VSL++AR++RD+ARKL+++++DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQEEARTFEQLAIEWHATNKKWTEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            +  KV  +   +FE++A  WHA+NK+W++ HS +VLKSLE ++FP IG+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMAGAVASSNRQHRPALE  205
            L P++A E     E+ASRLQQR +A+MRYAVQSG++ YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LRRTPELLQRIDSYTGRPLTRLAIELTLLVFIRSSELRFARWSEIDFETSMWTIPAEREA  265
            L R PELL RI+SY G+P+T+LA+ L LLVFIRSSELR+ARWSEID++ +MWTIPAERE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IEGIKHSQRGSKMHTPHLVPLSRQALAILKQVHKLSGDRDFVFIGDHDHRKPMSENTVNK  325
            + G+K S+RGSKM+TPHLVPLS+Q +AIL +++  +G+ +++F G HD RKP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKIEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANREKAVSPFDFAKLS  416
            +ERRLMLQWWADFLDANRE+ +SPF++AK++
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKIN  391

124) KPN2242_01530 in NC_017540


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  463 bits (1744),  Expect = 8e-132, Method: Compositional matrix adjust.
 Identities = 267/396 (68%), Positives = 341/396 (87%), Gaps = 5/396 (1%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANDVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL++++VDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAVIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTTIMRYAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +++MRYAVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYTGRPLTRLAVELTLLVFIRSSELRFARWSEVNFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE++++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRK----NTVN  321
            PL GVK S+RGSKMRTPHLVPLS+Q +AIL  +++  G+  LIF G HDPRK    NTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  322  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNTVRAAYIHKAEH  381
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSHQERN VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  382  LGERRLMLQWWADYLDANKMAAITPFDYAKINSPFR  417
            L ERRLMLQWWAD+LDAN+   I+PF+YAKIN+P++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

125) Ser39006_3432 in NC_022268


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  462 bits (1740),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 258/389 (67%), Positives = 329/389 (85%), Gaps = 0/389 (0%)

Query  26   MHLLVHTNGSKYWRFQYRFAGKQKMLALGVYPSVSLAEARERRDNARKLIANGIDPSEKK  85
            M LLVH NGS+YWR++YR+ GK+K LALGVYP VSL+EAR +RD+ARKLI++G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKIEESGALTFETVARSWHSSNKTWSEGHRTLILNSLTTHVFPIIGQRNVTDLKTRDL  145
            +A K+     L+FE +AR WH+SNK W+++H   +L+SL THVFP+IG+R++T L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LVPVKKAEQTGHLELASRLQQRITAIMRYAVHNALIEHNPAYDLAGAIATVKSVHRPALS  205
            L+PV+ AE     E+ASRLQQRI+A+MRYAV++++I  NPA D+AGA++TVK  HRPAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LERIAELMERIEAYKGKGLTQLAVRLCLLTFIRSSELRFARWSEFDFKNALWTIPAEREP  265
            L R++EL+ RI +YKG+ +TQLAV L LL FIRSSELR+ARWSE+D+ NA+WTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LKNIKFSHRGSKMKSPHLVPLSKQSLAILKEIKAISGAHKFVFTGFSYADKPISENTINK  325
            L  +KFSHRGSKM++PHLVPLSKQ +AIL E+++ +G + ++FTG   + KPISENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRAMGYNTQKDVCCHGFRTMACSALIESGLWSRDAVERQMSHQERSSVRAAYIHKAEHL  385
            ALR MGY+T +DVC HGFR+MACSALIESGLWSRDAVERQMSHQER++VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERRLMLQWWANFLDANSNCMIRPFEFAK  414
            +ERRLMLQWWA+FLDAN +  I PFE+AK
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

126) KPK_4978 in NC_011283


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  461 bits (1737),  Expect = 3e-131, Method: Compositional matrix adjust.
 Identities = 276/397 (70%), Positives = 347/397 (88%), Gaps = 1/397 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRlltqlaveltllvFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+ +TQLAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  LLDGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
             L GVK S+RGSKMRTPHLVPLS+Q +AIL  +++  G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREKIFSPFDYAKINNPLSQ  422
            L ERRLMLQWWAD+LDANRE+++SPF+YAKINNPL Q
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

127) int in NC_011741


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  456 bits (1717),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 265/389 (69%), Positives = 332/389 (86%), Gaps = 1/389 (0%)

Query  26   MHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            M LL++PNGS+YWRL+YR+ GK+K LALGVYP VSL+EAR KRDEA+KL+S+G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDSHSERVLKSMEDGLFTAIGRRKISELNTRD  145
            +A K+     L+FE +AR WH A +++W++SHS++VLKS+E  +F  IG R I+ LNT D
Sbjct  61   RAKKVVPDLQLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LL P++A EA    E+ASRLQQR +AVMRYAVQ+G+I YNPA +MAGA++  KR HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  PFERFSELLERIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFDNAMWTIPGERE  265
             + R++ELL RI+S+KG+ +T+LAV L LL+FIRSSELR+ARWSEID+DNAMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKDIREISGECELVFIGDHDFRKPMSENTVN  325
            PLPGVK SHRGSKM+TPHLVPLS+Q + +L +++  +GE  L+F G HD RKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGKWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALR MGYDTT +VCGHGFRAMACSALIESG WSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADYLNALKDRFISPFDFT  414
            L+ERRLMLQWWAD+L+A ++RFISPF+++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYA  388

128) ECO103_5061 in NC_013353


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  453 bits (1707),  Expect = 7e-129, Method: Compositional matrix adjust.
 Identities = 256/389 (66%), Positives = 334/389 (86%), Gaps = 0/389 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVSLadararrddarKLLANGIDPGDKK  85
            M LLVHPNGS+YWRL+YR+ GK+K LALGVYP+VSL++AR++RD+ARKL+++G+DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKIEQEEARTFEQLAIEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIADLKTRDL  145
            +  K+  +   +FE++A  WHA+NK+W++ HS +VLKSLE ++FP IG+R+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVELSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASNNRQHRPALQ  205
            L P++A E     E+ASRLQQR +A+MRYAVQSG++ YNPA +M GA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKLIPELLRRIDSYTGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETSMWTIPAEREA  265
            L  +PELL RI+SY G+P+T+LAV L LLVFIRSSELR+ARWSEID++ +MWTIPAERE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSHQALAILKDVYKLSGDRDFVFIGDHDHRKPMSENTVNK  325
            + GVK S+RGSKMRTPHLVPLS Q +AIL ++   +G+ +++F G HD RKP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERSSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ER++VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANRESEVSPYDFGK  414
            +ERRLMLQWWADFLDANRE  +SP++++K
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

129) ECO55CA74_24440 in NC_017656


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  452 bits (1703),  Expect = 1e-128, Method: Compositional matrix adjust.
 Identities = 263/391 (68%), Positives = 333/391 (86%), Gaps = 1/391 (0%)

Query  26   MHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            M LL++PNGS+YWRL+YR+ GK+K LALGVYP VSL+EAR KRDEA+KL+S+G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKIEQSEALTFESVARDWHKACKRKWSDSHSERVLKSMEDGLFTAIGKRKISELNTRD  145
            +A K+     L+FE +AR WH A +++W++SHS++VLKS+E  +F  IG+R I+ LNT D
Sbjct  61   RAKKVVPDLQLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LL P++A EA    E+ASRLQQR +AVMRYAVQ+G+I YNPA +MAGA++  KR HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  PFERFSELLARIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFENAMWTIPGERE  265
             + R++ELL+RI+S+KG+ +T+LAV L LL+FIRSSELR+ARWSEID++NAMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLPGVKHSHRGSKMRTPHLVPLSCQALAVLTKIKEISGDHELVFIGDHNFRKPMSENTVN  325
            PLPGVK SHRGSKMRTPHLVPLS Q +A+L+ ++  +G++ L+F G H+ RKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRAMGYDTTVEVCGHGFRAMACSALIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            KALR MGYDTT +VCGHGFRAMACSALIESGLWS+DAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADYLDLLRIRQVSPFDFKKT  416
            L+ER+LMLQWWAD+LD  R R +SPF++ K 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKI  390

130) KOX_09480 in NC_016612


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  452 bits (1703),  Expect = 1e-128, Method: Compositional matrix adjust.
 Identities = 259/391 (67%), Positives = 336/391 (86%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPEIkladararrdearkllaNGVDPGDKK  85
            M LLVHPNGS+YWRL+YR+ GK+K LALGVYPE+ L++AR++RDEARKL+++GVDP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNITELKTRDL  145
            +  KV      +F ++A  WH++NK+W++ H+++VLKSLE ++F+ +G+R+IT L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTSAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALE  205
            L P++A E     E+A+RLQQR SA+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREP  265
            L R+PELL +I++Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+EREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVNS  325
            +PGVK S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERKFMLQWWADFLDVNREKGITPFDYAKIN  416
            +ER++MLQWWADFLD NRE+ I+PF+YAKIN
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAKIN  391

131) SARI_03082 in NC_010067


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  452 bits (1702),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 256/392 (66%), Positives = 333/392 (85%), Gaps = 1/392 (0%)

Query  26   MFLLVKPNGSRYWRFRFRFGGKQHLMAFGVYPDVSLADarkkreearrLVAAGIDPREHK  85
            MFLLV PNGSRYWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EAR+L++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVETSGRLEVASRLQQRTTAIMRYAVQSGVIDYNPAQERAGAVASSNRQHRPAL  205
            LLIP++A E+    E+ASRLQQR +A+MRYAVQSG+I YNPA + AGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLEKIDGYIGRPLTRWATELTLLIFIRSSELCFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I++Y G+P+T+ A  L LL+FIRSSEL +ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            P+PGVK S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMEHNSVRAAYIHKAEH  385
             ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSH E+N+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRDKGITPFDYAKIN  417
            L+ER+LMLQWWADFLDANR++ I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

132) YpsIP31758_3540 in NC_009708


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  451 bits (1700),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 261/380 (69%), Positives = 330/380 (87%), Gaps = 1/380 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGIYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG+YPE+SL++AR++RDEARK +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQSIGKRNITDLGTRD  145
            +A KV  + + ++FE +AR WHASN+QW+++HS +VLKSLE ++F  IG+R+IT L T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL P++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA++T KR+HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            +L+R++ELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLEGVKHSHRGSKMRTPHLVPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            PL GVK SHRGSKMRTPHLVPLS+Q +AIL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVDVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALRVMGYDT  DVCGHGFR+MACS+LIESGLWSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMIQWWADFFGGKQA  405
            L+ER+LM+QWWADF+++++ 
Sbjct  360  LEERRLMLQWWADFLDANRE  379

133) ETAF_2789 in NC_017309


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  451 bits (1698),  Expect = 3e-128, Method: Compositional matrix adjust.
 Identities = 266/391 (69%), Positives = 332/391 (85%), Gaps = 1/391 (0%)

Query  26   MHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVSLGEARRKRDEAKKLVFDGIDPSEKK  85
            M LL++PNGS+YWRL+YR+ GK+K LALGVYP VSL+EAR KRDEA+KL+ +G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDSHSERVLKSMEDGLFTAIGKRKISELNTRD  145
            +A K+     L+FE +AR WH A +++W++SHS++VLKS+E  +F  IG+R I+ LNT D
Sbjct  61   RAKKVVPDLQLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LL P++A EA    E+ASRLQQR +AVMRYAVQ+G+I YNPA +MAGA++  KR HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  PFERFSELLERIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFDNAMWTIPAERE  265
             + R++ELL RI+S+KG+ +T+LAV L LL+FIRSSELR+ARWSEID+DNAMWTIPAERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLPGVKHSHRGSKMRTPHLVPLSCQALAVLTEIKEISGDHELVFIGDHDFRKPMSENTVN  325
            PLPGVK SHRGSKMRTPHLVPLS Q +A+L+E++  +G++ L+F G HD RKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            KALR MGYDTT +VCGHGFRAMACSALIESGLWS+DAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADYLDLLRIRQVSPFDFKKT  416
            L+ER+LMLQWWAD+LD  R R +SPF++ K 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKI  390

134) ETAC_14745 in NC_020796


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  451 bits (1700),  Expect = 3e-128, Method: Compositional matrix adjust.
 Identities = 263/391 (68%), Positives = 331/391 (85%), Gaps = 1/391 (0%)

Query  26   MHLLVNPNGSKYWRLQYRFNGKQKILALGVYPTVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            M LLV+PNGS+YWRL+YR+ GK+K LALGVYP VSL+EAR KRDEA+KL+S+G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKIEQSEALTFESVARDWHTACKRKWSDSHSERVLKSMEDGLFTAIGRRKISELNTRD  145
            +A K+     L+FE +AR WH A +++W++SHS++VLKS+E  +F  IG R I+ LNT D
Sbjct  61   RAKKVVPDLQLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLAPIKAVEASGRLEVAARLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LL P++A EA    E+A+RLQQR +AVMRYAVQ+G+I YNPA +MAGA++  KR HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  PFERFSELLERIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFDNAMWTIPGERE  265
             + R++ELL RI+S+KG+ +T+LAV L LL+FIRSSELR+ARWSEID+DNAMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKAIREISGECDLVFIGDHDFRKPMSENTVN  325
            PLPGVK SHRGSKM+TPHLVPLS+Q + +L  ++  +GE +L+F G HD RKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRSMGYDTTAEVCGHGFRAMACSALIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            KALR MGYDTT +VCGHGFRAMACSALIESGLWS+DAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  IDERKLMLQWWADYLDLLRIRQVSPFDFKRI  416
            ++ER+LMLQWWAD+LD  R R +SPF++ +I
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKI  390

135) W5S_1543 in NC_017845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  449 bits (1693),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 261/393 (67%), Positives = 332/393 (85%), Gaps = 1/393 (0%)

Query  26   MFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVSLSEARQKRDEARKLIAAGVDPNEHK  85
            MFLLVH NGS+YWRLRYR  GKEKTLALGVYPEVSLSEAR KRDEARKLI+ GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKTQQQDDEQTFEAVARAWHTDNKKWSESHAERILKSLSDNIFPAIGSKHISDLKTRD  145
            +A K    D + +FE +AR WH+ NK+W++SH++++LKSL  ++FP IG+++I+ L+T D
Sbjct  61   RA-KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLRPIKSVERSGRLEVAKRLKQRVTAIMTYAVQNGLIDYNPAQDMAGAIMPGKVEHrpal  205
            LL P+++ E     E+A RL+QR++A+M YAVQ+G+I YNPA DMAGA+   K +HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  alerlpellGRIDGYKGREFTKWVINLSLLIFIRSSELRFARWPEIDFERALWTIPPERE  265
             L RLPELL+RI++YKG+  T+  + L+LL+FIRSSELR+ARW+EID++ A+WTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKFSERGSKMHTPHLVPLSRQALEILTKIREVSGHCELVFIGDHSSRKPVSEGTVN  325
            P+PGVKFS+RGSKM+TPHLVPLS+Q + IL+ ++  +G+  L+F G H +RKP+SE TVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALQTMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  385
            KAL+ MGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADFLDANRERGVSPFDFGKLTT  418
            L+ERRLMLQWWADFLDANRER +SPF+++K+  
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINN  392

136) CKO_03532 in NC_009792


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  446 bits (1681),  Expect = 8e-127, Method: Compositional matrix adjust.
 Identities = 260/388 (68%), Positives = 328/388 (85%), Gaps = 1/388 (0%)

Query  26   MHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVSLGEARRKRDEAKKLVSVGIDPSEKK  85
            M LL++PNGS+YWRL+YR+ GK+K LALGVYP VSL+EAR KRDEA+KL+S G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDSHSERVLKSMEDGLFTTIGKRKISELNTRD  145
            +A K+     L+FE +AR WH++ +++W++SHS++VLKS+E  +F  IG+R I+ LNT D
Sbjct  61   RAKKVVPDLQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRIHRPAL  205
            LL P++A EA    E+ASRLQQR +AVMRYAVQ+G+I YNPA +MAGA++  KR HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  PFERFSELLERIDNFKGRkltklavkltllIFIRSSELRFARWSEIDFENAMWTIPGERE  265
             + R++ELL RI+++KG+ +T+LAV L LL+FIRSSELR+ARWSEID++NAMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKAIREISGEFDLVFIGDHDFRKPMSENTVN  325
            PLPGVK SHRGSKM+TPHLVPLS+Q + +L  ++  +GE +L+F G HD RKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGKWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALR MGYDTT +VCGHGFRAMACSALIESG WSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADYLDETTKRRIAPFDF  413
            L+ERRLMLQWWAD+LD    R I+PF++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEY  387

137) Pecwa_1669 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  445 bits (1675),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 261/392 (67%), Positives = 328/392 (84%), Gaps = 1/392 (0%)

Query  26   MFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVSLSEARQKRDEARKLIAAGVDPNEHK  85
            MFLLVH NGS+YWRLRYR  GKEKTLALGVYPEVSLSEAR KRDEARKLI+ GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKTQQQDDAQTFEVVARAWHADNKKWSGSHAERILKSLSDNIFPAIGGAHIANLKTRD  145
            +A K    D   +FE +AR WHA NK+W+ SH++++LKSL  ++FP IG  +I+ L+T D
Sbjct  61   RA-KKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQNGLIDYNPAQDMAGAIMPGKVEHrpal  205
            LL P+++ E     E+A RL+QR++A+M YAVQ+G+I YNPA DMAGA+   K +HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  alerlpellGRIDGYKGREFTKWVINLSLLIFIRSSELRFARWPEIDFERALWTIPPERE  265
             L RLPELL+RI++YKG+  T+  + L+LL+FIRSSELR+ARW+EID++ A+WTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKFSERGSKMHTPHLVPLSRQALEILKKIREVSGHCELVFIGDHSSRKPVSEGTVN  325
            P+PGVKFS+RGSKM+TPHLVPLS+Q + IL  ++  +G+  L+F G H +RKP+SE TVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALQTMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  385
            KAL+ MGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERGVSPFDFGKVK  417
            L+ER+LMLQWWADFLDANRER +SPF+++K++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

138) SPC_4619 in NC_012125


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  444 bits (1672),  Expect = 4e-126, Method: Compositional matrix adjust.
 Identities = 256/390 (66%), Positives = 326/390 (84%), Gaps = 1/390 (0%)

Query  26   MHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            M LL++PNGS+YWRL+YR+ GK+K LALGVYP VSL+EAR KRDEA+KL+S+G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDFHSERVLKSLEDNLFSSIGQRKIAELKTKD  145
            +A K+     L+FE +AR WH A +++W++ HS++VLKSLE ++F+ IG+R I+ L+T D
Sbjct  61   RAKKVVPDLQLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLDPVKTVAASGRLEVAARLQQRTTVIMRYAVQNGLIDYNPAQEMSGAIAVAKRTHRPAL  205
            LL PV++  A    E+A+RLQQR + +MRYAVQ+G+I YNPA +M+GA++  KR HRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  PFDRFSELLERIESFKGRkltklavkltllIFIRSSELRFARWSEIDFVNAMWTIPGERE  265
             + R++ELL RI S+KG+ +T+LAV L LL+FIRSSELR+ARWSEID+ NAMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKAIREISGECDLVFIGDHDFRKPMSENTVN  325
            PLPGVK SHRGSKM+TPHLVPLS+Q + +L  ++  +GE +L+F G HD RKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGKWSRDAVERQMSHQERNSVRAAYIHKAEH  385
            KALR MGYDTT +VCGHGFRAMACSALIESG WSRDAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADYLDETTKRRIAPFDFDK  415
            L+ER+LMLQWWAD+LD    R I+PF++ K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

139) SFV_4227 in NC_008258


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  439 bits (1654),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 252/369 (69%), Positives = 321/369 (87%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSEID++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             L GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

140) SFxv_4606 in NC_017328


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  438 bits (1649),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 252/369 (69%), Positives = 321/369 (87%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSEID++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             L GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

141) S4839 in NC_004741


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  438 bits (1649),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 252/369 (69%), Positives = 321/369 (87%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSEID++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             L GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

142) SF4224 in NC_004337


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  438 bits (1649),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 252/369 (69%), Positives = 321/369 (87%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSELR+ARWSEID++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             L GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
            KALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSHQER++VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

143) MU9_135 in NC_020418


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  436 bits (1641),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 263/397 (67%), Positives = 342/397 (87%), Gaps = 1/397 (0%)

Query  26   MHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDISLaearekrdaarkLIANGFDPSekr  85
            M L+VH NGS+YWRL+YR+ GK+K LALGVYP++SL+EAR KRD ARKLI++G DP E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kevkeeqqkeFNTFEKVARDWHATNKKWSEGHSHRVLKSLEDNIFTAIGKRNIAELKTRD  145
            +  K   + ++ +FE +AR WHA+NK+W+++HS++VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQSGLIDYNPAQDMAGAVATGKRVHRAAL  205
            LL P++A E     E+A+RLQQR++A+MRYAVQSG+I YNPA DMAGA++T KR HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRLPEFLQRIDDYKGRPltklavkltllvFIRSSELRFARWDEIDFENAMWTIPAERE  265
            +L RLPE+L RI+ YKG+P+T+LAV L LLVFIRSSELR+ARW EID++NAMWTIPAERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQIYQFSGNHELIFIGDHNPRKPMSENTVN  325
            ++ GVK SHRGSKMRT HLVPLS+Q + IL ++   +G++ LIF G H+PRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  NALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            +ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  IDERRLMVQWWADYLDANLEQTISPFDFAKFNNPMNH  422
            ++ERRLM+QWWAD+LDAN E+ ISPF++AK+NNP+++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

144) CFSAN002050_22445 in NC_021818


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  435 bits (1640),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 319/389 (83%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWQLKYRFGGKEKKLAFGAYPTVTLANARKLREEARAVLSTGDDPGVKK  85
            ++LL+ PNGS+ W+L+YR+ GKEK LA+G YP V+L++AR  R+EAR ++S G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKQAKKSGNTFEEVARKWLAGNIRWTEAHAAKALRSLELHVFPLIGKIPVTDLKTADL  145
            +  K       +FE++AR+W A+N +W+++H+ K L+SLE HVFP+IG+  +T L+T+DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPLRVAERKGNLETAARIQQRTTAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALP  205
            LIP+R AE K   E A+R+QQR +A+MRYAVQ ++I  NPA D++GA++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LEKMPELLERLEGYSGRLLTRLAVQLNLLIFIRSSELRFARWAEIDLDGAMWTIPAGREP  265
            L ++PELL R+ +Y G+ +T+LAV LNLL+FIRSSELR+ARW+EID+D AMWTIPA REP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVRYSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINK  325
            +PGV++S+RG+KM+TPHLVPLSKQ V++L +L+  +G++ L+F G HDPRKP+SENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVDVCGHGFRTMACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHL  385
            ALRVMGYDT  DVCGHGFR+MACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACRQKFVAPYRYDR  414
            +ER  M+QWW+D+LDA R++F++P+ Y +
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

145) SARI_03312 in NC_010067


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  433 bits (1629),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 233/389 (60%), Positives = 319/389 (83%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVTLANARKLREEARAVLSAGDDPGVKK  85
            ++LL+ PNGS+ W+L+YR+ GKEK LA+G YP V+L++AR  R+EAR ++S G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKQAKKSGNTFEEVARRWLAGNIRWTEHHAAKILRSLELHVFPLIGNIPVADLKTADL  145
            +  K       +FE++ARRW A+N +W++ H+ K+L+SLE HVFP+IGN  ++ L+T+DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPLRVAEKKGNLETAARSQQRTTAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALP  205
            LIP+R AE K   E A+R QQR +A+MRYAVQ ++I  NPA D++GA++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LEQIPQLLERLEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDGAMWTIPTQRES  265
            L ++P+LL R+ +Y G+ +T+LAV LNLL+FIRSSELR+ARW+EID+D AMWTIP++RE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVRYSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINK  325
            +PGV++S+RG+KM+TPHLVPLSKQ V++L +L+  +G++ L+F G HDPRKP+SENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRVMGYDTKVDVCGHGFRTMACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHL  385
            ALRVMGYDT  DVCGHGFR+MACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACRQKFVAPYRYDR  414
            +ER  M+QWW+D+LDA R++F++P+ Y +
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

146) intB in NC_010554


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  428 bits (1613),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 261/395 (67%), Positives = 337/395 (86%), Gaps = 1/395 (0%)

Query  26   MHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDISLaearekrdaarkLIANGFDPSekr  85
            M L+VH NGS+YWRL+YR+ GK+K LALGVYP++SL+EAR KRD ARKLI++G DP E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kevkeeqqkeFNTFEKVARDWHATNQRWSEGHSHRVLKSLEDNIFVAIGKRNIAELKTRD  145
            +  K   + ++ +FE +AR WHA+N++W+++HS++VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQSGLIDYNPAQDMAGAVATGKRVHRAAL  205
            LL P++A E     E+A+RLQQR++A+MRYAVQSG+I YNPA DMAGA++T KR HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRLPEFLERIDDYKGRPltklavkltllvFIRSSELRFARWDEIDFENAMWTIPAERE  265
            +L RLPE+L RI+ YKG+P+T+LAV L LLVFIRSSELR+ARW EID++NAMWTIPAERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQIYQFSGNHELIFIGDHNPRKPMSENTVN  325
            ++ GVK SHRGSKMRT HLVPLS+Q + IL ++   +G++ LIF G H+PRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  NALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            +ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  IEERRLMVQWWADYLDASRGGEISPFSFAKISNEI  420
            +EERRLM+QWWAD+LDA+R   ISPF +AKI+N +
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNPL  394

147) Ent638_2887 in NC_009436


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  428 bits (1611),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 257/388 (67%), Positives = 326/388 (85%), Gaps = 0/388 (0%)

Query  26   MHLLVQPSGSKYWRLQYRFSGKQKMLALGVYPEVSLSearrrreearQLIANNVDPGEKR  85
            M LLV+P+GS+YWRL+YR+ GK+K LALGVYPEVSLSEAR +R+EAR+LI++ VDP E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KTKKIEEKGLLIFETVARDWHSSNRTWSDSHRKTVLSSLITHVFPVIGKRNITELKTRDL  145
            ++KK+     L FE +AR WH+SN+ W++SH   VL SL THVFP IG+R+IT L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LVPLKKAEATGHLELAARLQQRITAIMRYAVHNALVDQNPAYDLTGAVTTAKSNHRPAlp  205
            L+P++ AEA    E+A+RLQQRI+A+MRYAV+++++  NPA D++GA+TT K +HRPAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  leqlpellKRIGTYKGKGITQIAVQLTLLTFIRSSELRFARWSEVNFKNSLWTIPAERQV  265
            L +LPELL RIG+YKG+ +TQ+AV L LL FIRSSELR+ARWSE+++ N++WTIPAER+ 
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LDGVKYSGRGSKMKTPHLVPLSKQAVVLLKKLHAISGENELMFVGFSRDDKPISENTVNK  325
            L GVK+S RGSKM+TPHLVPLSKQ V +L  L++ +GEN L+F G     KPISENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRTMGYDTKKDVCGHGFRTMACSALIESGLWSRDAVEKQMSHQERNSVRAAYIHKAEHL  385
            ALR MGYDT +DVCGHGFR+MACSALIESGLWSRDAVE+QMSHQERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  EERKLMLQWWANYLDTCKEEAITPFTYA  413
            EER+LMLQWWA++LD+ +E  I+PF YA
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYA  388

148) intB in NC_017390


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  425 bits (1601),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 244/379 (65%), Positives = 317/379 (84%), Gaps = 0/379 (0%)

Query  26   MYLLIHPNGSKYWRMQYRFGGKQKTLALGVYPAVSLSDARQRRDEAKKLLAKGTDPVVKK  85
            M+LL+HPNGS+YWR++YR+ GK+KTLALGVYP VSLS+AR +RDEA+KL++ G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QDDKRENSGTFSFESVARQWHAGNKKWSEEYKGKILRTLETYLFPVIGNRHIAELKTRDL  145
            +  K      +SFE +AR+WHA+NK+W++   +K+L++LET +FP IGNR+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LVPIKAVEDKGFNEVAMRLQQRTTAIMRYAVLQGILDYNPAQEMSGAITTGKRAHRPALP  205
            L+P++A E K + E+A RLQQR +A+MRYAV  GI+ YNPA +M+GA+TT KR HRPAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  FERYHEFLERIDSYrkrlltrlavkltlltFIRSSELRFARWSEIDFKKSLWTIPGEREA  265
            + R  E+L RI+SY+ + +T+LAV L LL FIRSSELR+ARWSEID+ +++WTIP+ERE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGIKNAHRGAKMKTPHLVPLSRQAIAILREIQEISGDHNFIFIGDHYADKPMSENTVNK  325
            LPG+K +HRG+KM+TPHLVPLS+Q +AIL E+Q  +G++ +IF G H + KP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRTMGYDTQKDVCGHGFRTMACSSLIESGKWSKDAVERQMSHQELNNVRAAYTHQAEHL  385
            ALR MGYDT +DVCGHGFR+MACS+LIESG WS+DAVERQMSHQE N VRAAY H+AEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANRE  404
            +ERRLMLQWWADFLDANRE
Sbjct  361  EERRLMLQWWADFLDANRE  379

149) EpC_14570 in NC_012214


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  425 bits (1601),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 244/379 (65%), Positives = 317/379 (84%), Gaps = 0/379 (0%)

Query  26   MYLLIHPNGSKYWRMQYRFGGKQKTLALGVYPAVSLSDARQRRDEAKKLLAKGTDPVVKK  85
            M+LL+HPNGS+YWR++YR+ GK+KTLALGVYP VSLS+AR +RDEA+KL++ G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QDDKRENSGTFSFESVARQWHAGNKKWSEEYKGKILRTLETYLFPVIGNRHIAELKTRDL  145
            +  K      +SFE +AR+WHA+NK+W++   +K+L++LET +FP IGNR+I+ L+T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LVPIKAVEDKGFNEVAMRLQQRTTAIMRYAVLQGILDYNPAQEMSGAITTGKRAHRPALP  205
            L+P++A E K + E+A RLQQR +A+MRYAV  GI+ YNPA +M+GA+TT KR HRPAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  FERYHEFLERIDSYrkrlltrlavkltlltFIRSSELRFARWSEIDFKKSLWTIPGEREA  265
            + R  E+L RI+SY+ + +T+LAV L LL FIRSSELR+ARWSEID+ +++WTIP+ERE+
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  LPGIKNAHRGAKMKTPHLVPLSRQAIAILREIQEISGDHNFIFIGDHYADKPMSENTVNK  325
            LPG+K +HRG+KM+TPHLVPLS+Q +AIL E+Q  +G++ +IF G H + KP+SENTVNK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRTMGYDTQKDVCGHGFRTMACSSLIESGKWSKDAVERQMSHQELNNVRAAYTHQAEHL  385
            ALR MGYDT +DVCGHGFR+MACS+LIESG WS+DAVERQMSHQE N VRAAY H+AEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANRE  404
            +ERRLMLQWWADFLDANRE
Sbjct  361  EERRLMLQWWADFLDANRE  379

150) MU9_117 in NC_020418


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  423 bits (1594),  Expect = 5e-120, Method: Compositional matrix adjust.
 Identities = 256/390 (66%), Positives = 334/390 (86%), Gaps = 1/390 (0%)

Query  26   MHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDISLaearekrdaarkLIANGFDPSekr  85
            M L+VH NGS+YWRL+YR+ GK+K LALGVYP++SL+EAR KRD ARKLI++G DP E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kevkeeqqkeFNTFEKVARDWHATNKKWSEGHSHRVLKSLEDNIFAAIDKRNIAELKTRD  145
            +  K   + ++ +FE +AR WHA+NK+W+++HS++VLKSLE ++F+ I++R+I+ L+T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLEPIKAVEMSGRLGVAARLQQRVTGIMRYAVQSGLIDYNPAQDMAGAVATGKRVHRAAL  205
            LL P++A E      +A+RLQQR++++MRYAVQSG+I YNPA DMAGA++T KR HR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRLPEFLQRIDDYKGRPltklavkltllvFIRSSELRFARWDEIDFENAMWTIPAERE  265
            +L RLPE+L RI+ YKG+P+T+LAV L LLVFIRSSELR+ARW EID++NAMWTIPAERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIEGVKHSHRGSKMRTPHLVPLSRQAIEILKQIYQFSGNHELIFIGDHNPRKPMSENTVN  325
            ++ GVK SHRGSKMRTPHLVPLS+Q + IL ++   +G++ LIF G H+PRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  NALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            +ALRVMGYDT  +VCGHGFR+MACS+LIESGLWS+DAVERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  IEERRLMVQWWADFLFENTHALITPYEFAK  415
            +EERRLM+QWWADFL  N + +I+P+E+AK
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

151) Rahaq_1192 in NC_015061


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  413 bits (1553),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 229/388 (60%), Positives = 309/388 (80%), Gaps = 6/388 (1%)

Query  26   LYLLVHSNGSKYWRFRRTINGKDTTRALGMYPIMTLAEARKARDEFLKSLSQGIDPLHAE  85
            ++LLVH+NGS+YWR+R  I GK+ T ALG+YP ++L+EAR  RDE  K +S+G+DP +  
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KEKIA------SFEEIARQWHARKKTWSSLHSLNVMRAFETHLFPEIGSKAINRLTTQDL  139
            + K        SFE+IAR+WHA +K W+  HS +V++++ETH+FP IG++ I  L T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  140  LAPLRAIEETGKHELASRLQQRTTSIMRYAVQSGLIKYNPAQELTGAIETHKSQHRPALP  199
            L P+RA E     E+ASRLQQR +++MRYAVQSG+I+YNPA +++GA+ T K QHRPAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  200  LERIPELLQKIDSYSGRNLTKIAVKLNLLIFIRSSELRFSRWTEINKEHRLWEIPANREE  259
            L R+PELL +I+SY G+ +T++AV LNLL+FIRSSELR++RW+EI+ ++ +W IPA+RE 
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  260  LEKVRFSYRGSKMKMPHLIPLSNQALVLIEELEALSGDEVLMFPGDHYQHKPMSENTINK  319
            L  V+FS RGSKM+ PHL+PLS+Q + ++ EL++ +G++ L+F G H  +KP+SENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  320  ALRTMGFDTKTEICGHGFRAMACSALIESGRWSRDAVERQMSHQERNSVRAAYIHKAEHM  379
            ALR MG+DT  ++CGHGFRAMACSALIESG WSRDAVERQMSHQERN+VRAAYIHKAEH+
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  380  EERRPMLQWWADYLEACRGEFIPPYAFN  407
            EERR MLQWWAD+L+A R  FI+P+ + 
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYA  388

152) W5S_0472 in NC_017845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  408 bits (1535),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 219/334 (66%), Positives = 283/334 (85%), Gaps = 0/334 (0%)

Query  32   TDKIEQSEALTFRDVAIEWHATNKKWSEEHSRRVLKSLEDNLFSAIGKRNIAELKTRDLL  91
            + K+     L+F ++A  WHA+NK+W++ HS +VLKSLE ++F+ IG+R+I+ L+T DLL
Sbjct  62   AKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLL  121

Query  92   APIKVVEQSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALEL  151
             P++  E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+L
Sbjct  122  IPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDL  181

Query  152  KHTPKLLQRIDNYTGRPLTRLAAELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREPI  211
             + P LL RI++Y G+P+T+LA  L LL+FIRSSELR+ARWSEID++ +MWTIP+EREP+
Sbjct  182  SRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPL  241

Query  212  EGVKHSHRGSKMRTPHLVPLSRQALVILKQIQQFSGDHELIFIGDHDPRKPMSENTVNKA  271
             GVK SHRGSKMRTPHLVPLS+Q + IL ++Q  +G++ LIF G HDPRKP+SENTVNKA
Sbjct  242  PGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNKA  301

Query  272  LRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLD  331
            LRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL+
Sbjct  302  LRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLE  361

Query  332  ERKLMLQWWADFLDANREKAVSAFDFGKVSNQLK  365
            ER+LMLQWWADFLDANRE+ +S+F+++K++N LK
Sbjct  362  ERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

153) plu4477 in NC_005126


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  408 bits (1536),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 225/390 (58%), Positives = 319/390 (82%), Gaps = 3/390 (0%)

Query  26   LYLMISPGGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEVRLLLADGINPAEKR  85
            ++L++ P GS+ W L+YR+ GKE  +A+G YP +SL+ AR KRDE R L+++G++P E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   GEGKKEAQDALITFEKVARDWHRNISQNRWSETHAGRVWRDMERNILPAIGHRHIADLKT  145
              +KK   D  ++FE +AR WH   S+++W+++H+++V + +E +++P IG+R+I+ L+T
Sbjct  61   -RAKKVVPDLQLSFEHIARRWH--ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLSGAIAPPKATHRP  205
             DLL P++A E +   ++ASRL+QR++ +MRYAVQ+++I  NPA D++GA++  K  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALKLDKLPDFLARIENYKGRTLTTLALKFTLCVFIRSSELRFARWTEIDFKRAMWTIPAE  265
            AL L +LP++L+RI +YKG+ +T LA+ + L VFIRSSELR+ARW+EID+  AMWTIPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  REAIPGVKHSQRGAKMRTEHLVPLSRQALALLKEIQAISGGHELIFPGDRRPTKPMSENT  325
            RE++PGVK S+RG+KMRT HLVPLS+Q +A+L E+Q+ +G + LIF G + P KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  326  VNNALRVMGYDTTTELCGHGFRTMACSALVESGQWSRDAVERQMSHQERDSVRAAYIHKA  385
            VN+ALRVMGYDTT ++CGHGFR+MACSAL+ESG WSRDAVERQMSHQER++VRAAYIHKA
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  386  EHIEERRLMLQWWADYLDANREGYVVPYEF  415
            EH+EERRLMLQWWAD+LDANRE ++ P+E+
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEY  387

154) Dd586_0881 in NC_013592


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  402 bits (1513),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 233/389 (60%), Positives = 314/389 (81%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTASLATARKLREEARAVLCAGADPGVKK  85
            ++LL+ PNGS+ W+L+YR+ GKEK LA+G YP  SL+ AR  R+EAR ++  G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQDKQARKNGNTFETVSRQWVAANIRWTEAHAAKVLRSLELHVFPLIGKTPLTDLKTADL  145
            +  K       +FE ++R+W A+N +W+++H+ KVL+SLE HVFP+IG+  +T L+T+DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPLRVAEKKGCLETAARIQQRTTVIMRYAVQEGLIASNPANDLCGAITTPPKNHYPAlp  205
            LIP+R AE K   E A+R+QQR + +MRYAVQ G+I  NPA D+ GA+TT  ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDNAMWTLPAQREP  265
            L RLPELL RI +Y G+ +T+LAV LNLL+FIRSSELR+ARW+EID+DNAMWT+PA+REP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  ITGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGDLLFPGDHDARKPMSENTINK  325
            + GV+ S+RG+KM+TPHLVPLSKQ V++L +L+  +G+ +L+F G HD+RKP+SENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRTMGYDTQADICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT  D+CGHGFR++ACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACQHQFIPAYRFEK  414
            +ER  M+QWW+D+LDA +++FI+++ + K
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

155) Dda3937_03406 in NC_014500


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  401 bits (1508),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 315/389 (81%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVSLANARKLREEARTILSAGDDPGVKK  85
            ++LL+ PNGS+ W+L+YR+ GKEK LA+G YP VSL++AR  R+EAR ++S G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QHDKQAKKNGNTFEAIARQWVAANIRWSEAHAAKVLRSLELHVFPLIGNVLVTDLKTANL  145
            +  K       +FE IAR+W A+N +W+++H+ KVL+SLE HVFP+IGN  +T L+T++L
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPLRVAEKKGCLETAARIQQRTTVIMRYAVQEGLIASNPANDLCGAITPPPKNHYPAlp  205
            LIP+R AE K   E A+R+QQR + +MRYAVQ G+I  NPA D+ GA+T   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDNAMWTLPAQREP  265
            L RLPELL RI +Y G+ +T+LAV LNLL+FIRSSELR+ARW+EID+DNAMWT+PA+REP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  ITGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGDLLFPGDHDARKPMSENTINK  325
            + GV+ S+RG+KM+TPHLVPLSKQ V++L +L+  +G+ +L+F G HD+RKP+SENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRTMGYDTQADICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT  D+CGHGFR++ACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDVCQHQFIPAYRFEK  414
            +ER  M+QWW+D+LD  +++FI+++ + K
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

156) PC1_0871 in NC_012917


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  398 bits (1499),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 315/389 (81%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVSLASARKLREEARTILSVGDDPGVKK  85
            ++LL+ PNGS+ W+L+YR+ GKEK LA+G YP VSL+ AR  R+EAR ++S G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QHDKQAKKNGNTFEAIARQWVAANIRWSEAHAAKVLRSLELHVFPLIGNVLVTDLKTANL  145
            +  K       +FE IAR+W A+N +W+++H+ KVL+SLE HVFP+IGN  +T L+T++L
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPLRVAEKKGCLETATRIQQRTTVIMRYAVQEGLIASNPANDLCGAITPPPKNHYpalp  205
            LIP+R AE K   E A+R+QQR + +MRYAVQ G+I  NPA D+ GA+T   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  leklpelleRIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDNAMWTLPAQREP  265
            L +LPELL RI +Y G+ +T+LAV LNLL+FIRSSELR+ARW+EID+DNAMWT+PA+REP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IAGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGELLFPGDHDARKPMSENTINK  325
            ++GV+ S+RG+KM+TPHLVPLSKQ V++L +L+  +G+  L+F G HD+RKP+SENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRTMGYDTQVDICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT  D+CGHGFR++ACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACQHQFIPAYRFEK  414
            +ER  M+QWW+D+LDA +++FI+++ + K
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

157) ECOK1_4788 in NC_017628


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  397 bits (1495),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 214/397 (54%), Positives = 310/397 (79%), Gaps = 2/397 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKV  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   VQKEARAENSGAYTFEAIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             ++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMMQWWADYLDMNRNKYITPYDYSKYKEILK  422
            HL+ERRLM+QWWAD+LD NR+++I+P++Y+K ++ LK
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINNPLK  395

158) PAU_03981 in NC_012962


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  397 bits (1494),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 224/394 (57%), Positives = 311/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPTDKKEDRLAFGVYPVISLadarakrdeakkLIASGVDPKA  85
            ++L + P GS+YWR++YR     KE  LA+GVYP +SL++AR+KRDEA+KLI+ GVDP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   TQKEAQAEVSGEFNFETIARKWHASNKRWGDYNRARVLRSLEQYIFPHIGKVDVRQLKTS  145
             ++  +     +++FE IAR+WHASNK+W++ +  +VL+SLE  +FP IG+ D+  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIRVVDDAGKHDVAQRLQQRVTAIMRYAVQNDIIDSNPAIDMAGALTMPKTKHYPA  205
            +LL P+R  +     ++A RLQQR++A+MRYAVQ++II  NPA+DMAGALT  K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSNCFPELLERINRYCGRKITRLAVVLTLLTFVRSSELRFARWDEIDFDISVWQIPGQR  265
            L  + +PELL RI  Y G+ +T+LAV+L LL F+RSSELR+ARW EID+D ++W IP++R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  NPIEGVRYSYRGMKMKSAHIVPLSNQAIDVLQQLKELSGDNELLFPGDHDPNKVMSENTV  325
            +P+ GV++S RG KM+++H+VPLS+Q + +L +L+  +G+N L+F G HDP K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRVMGYDTKTEVCGHGFRAMACSALVESGLWSKDAVERQMSHTERNGVRAAYIHTSE  385
            N+ALRVMGYDT  +VCGHGFRAMACSAL+ESGLWS+DAVERQMSH ERNGVRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLEERRLMIQWWADYLDQCKKEFIAPYVFSNKNS  419
            HLEERRLM+QWWAD+LD  +  FI+P+ +++ N+
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

159) Pecwa_0718 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  395 bits (1487),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 315/389 (81%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVSLASARKLREEARTILSAGDDPGVKK  85
            ++LL+ PNGS+ W+L+YR+ GKEK LA+G YP VSL+ AR  R+EAR ++S G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QHDKQAKKNGNTFEAIARQWVAANIRWSEAHTDKVLRSLELHVFPLIGNVLVTDLKTANL  145
            +  K       +FE IAR+W A+N +W+++H+DKVL+SLE HVFP+IGN  +T L+T++L
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LIPLRVAEKKGCLETAARIQQRTTVIMRYAVQEGLIASNPANDLYGAITPPPKNHYpalp  205
            LIP+R AE K   E A+R+QQR + +MRYAVQ G+I  NPA D+ GA+T   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  leklpelleRIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWVEIDLDNAMWTLPAQREP  265
            L +LPELL RI +Y G+ +T+LAV LNLL+FIRSSELR+ARW EID+DNAMWT+PA+REP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IAGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGDLLFPGDHDALKPMSENTINK  325
            ++GV+ S+RG+KM+TPHLVPLSKQ V++L +L+  +G+ +L+F G HD+ KP+SENT+NK
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  326  ALRTMGYDTQVDICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT  D+CGHGFR++ACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACQHQFIPAYRFEK  414
            +ER  M+QWW+D+LDA +++FI+++ + K
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYAK  389

160) SNSL254_A4836 in NC_011080


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  393 bits (1478),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 216/394 (55%), Positives = 307/394 (78%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAVMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++AVMRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSLQAMALLEQLKQMSGDKELLFPGDHDPTKVMSENTV  325
            E + GV++S RG KM+  H+VPLS Q +A+L +L+  +G++ L+F G HDP K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTDVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  DVCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDEIKIIYITPYDFAKMNN  419
            HL+ERRLM+QWWAD+LD  +  +I+P+++AK+NN
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

161) Dd703_3541 in NC_012880


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  392 bits (1474),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 228/393 (59%), Positives = 320/393 (82%), Gaps = 3/393 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEVRLLLSEGIHPTEKR  85
            ++LLV PNGS+ W L+YR+ GKE  +A+G YP +SL+ AR KRDE R L+SEG++P E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   EEEKEQAQDALNTFEKVARDWHRNISQNRWSQTHAGRVWRDMERNILPAIGQRHIADLKT  145
               K  ++  L +FE +AR WH   S+++W+Q+H+++V + +E +++P IG+R+I+ L+T
Sbjct  61   RAKKVVPDLQL-SFEHIARRWH--ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLTGAIAAPKATHRP  205
             DLL P++A E +   ++ASRL+QR++ +MRYAVQ+++I  NPA D++GA+++ K  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALKLDKLPDFLARIECYkgraltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPPE  265
            AL L +LP++L+RI  YKG+++T+LA+ L L VFIRSSELR+ARW+EID+  AMWTIP+E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGAHELVFPGDHRPIKPMSENT  325
            RE++PGVK S+RG+KMR+ HLVPLS+Q +A+L E+++ +G + L+F G H P KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  326  INSALRTMGYDTTTEVCGHGFRTMACSALVESGQWSRDAVARQMSHQEHNGVRAAYIHKA  385
            +N ALR MGYDTT +VCGHGFR+MACSAL+ESG WSRDAV RQMSHQE+NGVRAAYIHKA
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  386  EHLEERKLMLQWWADYLDANREEYVVPYEFKNI  418
            EHLEER+LMLQWWAD+LDANRE ++ P+E+ +I
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAKI  390

162) SN31241_8570 in NC_021902


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  392 bits (1473),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 216/394 (55%), Positives = 307/394 (78%), Gaps = 2/394 (0%)

Query  30   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  89
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  90   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  149
            +++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  150  HLLAPIKKVDASGKHDVAQRLQQRVTAVMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  209
            +LL P++  +A    ++A RLQQR++AVMRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  210  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  269
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  270  EEIKGVRYSYRGMKMKEEHIVPLSLQAMALLEQLKQMSGDKELLFPGDHDPTKVMSENTV  329
            E + GV++S RG KM+  H+VPLS Q +A+L +L+  +G++ L+F G HDP K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  330  NSALRAMGYDTKTDVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  389
            N ALR MGYDT  DVCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  390  HLDERRLMVQWWADYLDEIKIIYITPYDFAKMNN  423
            HL+ERRLM+QWWAD+LD  +  +I+P+++AK+NN
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

163) intB in NC_014228


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  391 bits (1472),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 218/391 (56%), Positives = 314/391 (81%), Gaps = 2/391 (0%)

Query  26   LYLEITSRGSKYWRMKYRRPTDKKEDRLAFGVYPVVSLadarakrdeakkLIAQGSDPKA  85
            ++L + + GS+YWR++YR     KE  LA+GVYP VSL++AR+KRDEA+KLI++G DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EKKGAQTESKGAPSFEQVAREWHASNKRWSEDHSNRILRSLEHYIFPHIGRLDISTLRTS  145
            +K++ +  +    SFE++AR WHASNK+W++ HS+++L+SLE  +FP IG  DI+TL T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  QLLAPIKSVDADGKHDIAQRLQQRVTSIMRYAVQNDILESNPANDMSGALSTVKAKHHPA  205
            +LL P+++ +A    +IA RLQQR++++MRYAVQ++I+  NPA DM+GAL+TVK +H+PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPHERLPEFLTRLSHYRGRLITQIAVELTLLTFVRSSELRFARWEELDLENAVWKIPATR  265
            L   RLPE+L+R++ Y+G+ +TQ+AV L LL F+RSSELR+ARW E+D++NA+W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  KPIEGVKFSERGMKMKTEHIVPLSRQAVSLFKILQGLSGECEVMFPHDHNPAKVMSESTV  325
             P+ GVKFS+RG KM+T H+VPLS+Q V+++  LQ  +GE  ++F   H+P K +SE+TV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRGMGYDTKTEVCGHGFRTMARGAMGESGLWNDDAIERQLSHVERKNVRAAYIHTSK  385
            N+ALR MGYDT  +VCGHGFR+MA +A+ ESGLW+ DA+ERQ+SH ER+ VRAAYIH + 
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERQLMVQWWADYLDANREKYITPYDFAK  416
            HL+ER+LM+QWWAD+LDANRE++I+P+++AK
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

164) KPHS_05400 in NC_016845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  391 bits (1471),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 211/395 (54%), Positives = 307/395 (78%), Gaps = 2/395 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARTKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++ARTKRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFAKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+ +++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NGALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLKSNEGKIVTPYEFAKIRKS  420
            HL+ERRLM+QWWAD+L +N  ++++P+E+AKI ++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

165) N559_4601 in NC_022082


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  391 bits (1471),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 211/395 (54%), Positives = 307/395 (78%), Gaps = 2/395 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARTKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++ARTKRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFAKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+ +++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NGALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLKSNEGKIVTPYEFAKIRKS  420
            HL+ERRLM+QWWAD+L +N  ++++P+E+AKI ++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

166) SSPA3984 in NC_011147


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 212/394 (54%), Positives = 309/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WH SNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  ++    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANKIKPISSFDYAKLHS  419
            HL+ERRLM+QWWAD+LDAN+ + IS+F+YAK+++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

167) int in NC_006511


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 212/394 (54%), Positives = 309/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WH SNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  ++    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANKIKPISSFDYAKLHS  419
            HL+ERRLM+QWWAD+LDAN+ + IS+F+YAK+++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

168) Dd1591_3702 in NC_012912


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  391 bits (1470),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 231/393 (59%), Positives = 319/393 (82%), Gaps = 3/393 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEVRLLLSEGIHPTEKR  85
            ++LLV PNGS+ W L+YR+ GKE  +A+G YP +SL+ AR KRDE R L+SEG++P E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   EEEKEQAQDAQNTFEKVARDWHRNISQNRWSQTHAGRVWRDIERNILPAIGQRHIADLKT  145
               K    D Q +FE +AR WH   S+++W+Q+H+++V + +E +++P IG+R+I+ L+T
Sbjct  61   RAKKV-VPDLQLSFEHIARRWH--ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLTGAIAAPKATHRP  205
             DLL P++A E +   ++ASRL+QR++ +MRYAVQ+++I  NPA D++GA+++ K  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALKLDKLPDFLAQIERYkgraltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPPE  265
            AL L +LP++L++I  YKG+++T+LA+ L L VFIRSSELR+ARW+EID+  AMWTIP+E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGVHELIFPGDHRPTKPMSENT  325
            RE++PGVK S+RG+KMR+ HLVPLS+Q +A+L E+++ +G + LIF G H P KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  326  INSALRTMGYDTTTEVCGHGFRTMACSALVESGQWSRDAVERQMSHQERNGVRAAYIHKA  385
            +N ALR MGYDTT +VCGHGFR+MACSAL+ESG WSRDAVERQMSHQERNGVRAAYIHKA
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  386  EHLEERKLMLQWWADYLDANREEHVVPYEFKNI  418
            EHLEER+LMLQWWAD+LDANRE  + P+E+ +I
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAKI  390

169) SEEB0189_19950 in NC_021844


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  391 bits (1470),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 212/394 (54%), Positives = 309/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WH SNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  ++    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANKIKPISSFDYAKLHS  419
            HL+ERRLM+QWWAD+LDAN+ + IS+F+YAK+++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

170) intB in NC_013892


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  390 bits (1466),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 222/398 (56%), Positives = 322/398 (81%), Gaps = 6/398 (1%)

Query  26   LYLEVSSRGSKYWRMKYYRPTDKKEDRLAFGVYPTVSLadarakrdeakkLMAQGIDPKA  85
            ++L V + GS+YWR++Y      KE  LA+GVYP VSL++AR+KRDEA+KL+++G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRY--RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EKKGTPTPAKVN-SFEQVARAWHASNKRWSDSHRQKILRSLEQYIFPHIGARDITTLRTS  144
            +K++    + ++ SFE++AR WHASNK+W++SH +K+L+SLE  +FP IG RDITTL T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  145  QLLAPVKAIDEQDKHDIAQRLRQRITAIMRYAVQNDILESNPANDMTGALTTAKSRHHPA  204
            +LL PV+A + ++  +IA RL+QRI+A+MRYAVQ++I+  NPA DM+GALTT K +H+PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  205  LPHECLPDFLNRLSAYRGRLLTKIAVELALLTFVRSSELRFARWQEIDLENSVWKIPATR  264
            L    LP++L+R+++Y+G+ +T++AV L LL F+RSSELR+ARW EID++N++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  265  QPIKGVRFSERGMKMKTDHIVPLSRQAVGLINALHELSGNCDVMFPSDHNSAKVMSENTV  324
            +P+ GV+FS+RG KM+T H+VPLS+Q V+++  L+  +G+ +++F + H++ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  325  NKALRAMGYDTQTEVCGHGFRTMARGAMGESGLWSDDAIERQLSHIERNNVRAAYIHTSK  384
            NKALR MGYDT  +VCGHGFR+MA +A+ ESGLWS DA+ERQ+SH ERN VRAAYIH + 
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  385  HLDERRLMVQWWADYLDANREKPITPYDFAK---PLRD  419
            HL+ERRLM+QWWAD+LDANRE+ I+P+++AK   PL++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ  396

171) intA_4 in NC_022370


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  390 bits (1465),  Expect = 9e-110, Method: Compositional matrix adjust.
 Identities = 212/391 (55%), Positives = 305/391 (79%), Gaps = 2/391 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKQAHAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRLLKTS  145
            +++          +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKVRHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRLPEFLSRLAAYRGRVMTRIAVELSLLTFVRSSELRFARWNEFDFDKALWRVPAKR  265
            L  SRLPE+LSR+++Y+G+ +T++AV L+LL F+RSSELR+ARW+E+D+D+A+W +PA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMNLLGQLKQISGDRKLLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L++L+  +G+  L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N+ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMMQWWADYIDHNKIMYTTPFDFAK  416
            HL+ERRLM+QWWAD++D N+  + +PF++AK
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

172) ECO26_5435 in NC_013361


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  390 bits (1465),  Expect = 9e-110, Method: Compositional matrix adjust.
 Identities = 211/392 (54%), Positives = 307/392 (79%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPMVTLAQARAKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRILRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  ++L+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFSEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L  SR++E+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDAAKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHTERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADFLEANRNNSVTPYEFAKF  417
            HL+ERRLM+QWWADFL+ANR+  ++P+E+AK+
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKI  390

173) ENC_43890 in NC_021046


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  388 bits (1458),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 208/391 (54%), Positives = 305/391 (79%), Gaps = 2/391 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGEYTFETIGREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +     + +FE I+R WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W +PA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKKLLFPGDHDTTKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD  K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHTERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDVNRDLHVTPYDFAN  416
            HL+ERRLM+QWWAD+LD NR+  ++P+++A+
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

174) A464_4477 in NC_021870


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  386 bits (1451),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 227/391 (59%), Positives = 312/391 (80%), Gaps = 3/391 (0%)

Query  26   LYLLVNPNGSKRWYIKYRFVNKEKKLALGPYPLLTLAQARRMREEAQLLLISGIDPSAHR  85
            ++LLV+PNGS+ W ++YR++ KEK LALG YP ++L++AR  R+EA+ L+  G+DP  ++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAERLAITPEHTFESVAREWVTSNVNWSAEHKKRVLRYFELYVFPTNGSCDITKMKVKNL  145
            +A ++    + +FE +AR W +SN +W+  H  +VL+ +E  VFP  G+ DIT ++  +L
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LVPIKEVEKAGKLDVASRLQQRTACVMRYAVQNGIIDHNPASDLTGAVSTPKVRHHPALD  205
            L+P++  E     ++ASRLQQR + VMRYAVQ+GII  NPA D++GA++T K +H+PALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LNLIPDFLERIDDYKGRqltqlavklalllFIRSSELRFARWDEIDLRNAMWTIPAEREP  265
            L+ +P++L RI+ YKG+ +TQLAV L LL+FIRSSELR+ARW EID+ NAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKYSVRGAKMHSPHLVPLSRQAIELLHEVRQHCRPGTE-LVFPGDHNYRKPMSENTI  324
            +PGVK+S RG+KM++PHLVPLS+Q + +L E+  + ++G + L+F G H+ RKP+SENT+
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL--QTWAGENGLIFTGAHDPRKPISENTV  298

Query  325  NKALRLMGYDTQKDVCGHGFRTMACSALVESGLWSSDAVERQMSHQERKRVRAAYIHKAQ  384
            NKALR+MGYDT +DVCGHGFR+MACSAL+ESGLWS DAVERQMSHQER+ VRAAYIHKA+
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  385  HLEERREMMQWWADYLDANRFRHVVPYGFKK  415
            HLEERR M+QWWAD+LDANR R + P+ + K
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

175) intB in NC_013892


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  386 bits (1450),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 218/391 (56%), Positives = 316/391 (81%), Gaps = 2/391 (0%)

Query  26   LYLEITSRGSKYWHMKYRRPTDKKEDRLAFGVYPIVSLadarakrdeakkLIAQGSDPKA  85
            ++L + + GS+YW+++YR     KE  LA+GVYP VSL++AR+KRDEA+KLI++G DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EKRGTQLESKGAPSFEQVAREWHASNKRWSEDHSNRILRSLEHYIFPHIGKLDISTVRTS  145
            +KR+ ++ +    SFE++AR WHASNK+W++ HS+++L+SLE  +FP IG+ DI+T+ T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  QLLAPIKSVDADGKHDIAQRLQQRVTSIMRYAVQNDILESNPANDMSGALSTVKAKHHPA  205
            +LL P+++ +A    +IA RLQQR++++MRYAVQ++I+  NPA DM+GAL+TVK +H+PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPHERLPEFLTRLSHYRGRLITQIAVELTLLTFVRSSELRFARWEELDLENAVWKIPATR  265
            L   RLPE+L+R++ Y+G+ +TQ+AV L LL F+RSSELR+ARW E+D++NA+W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  KPIEGVKFSERGMKMKTEHIVPLSRQAVSLFKILQGLSGECEVMFPHDHNPAKVMSESTV  325
             P+ GVKFS+RG KM+T H+VPLS+Q V+++  LQ  +GE  ++F   H+P K +SE+TV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRVMGYDTKTEVWGHGFRTMARGAMGESGLWNDDAIERQLSHVERKNVRAAYIHTSK  385
            N+ALRVMGYDT  +V GHGFR+MA +A+ ESGLW+ DA+ERQ+SH ER+ VRAAYIH + 
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANREKYITPYDFAK  416
            HL+ERRLM+QWWAD+LDANRE++I+P+++AK
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

176) STY4821 in NC_003198


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  385 bits (1449),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 210/392 (54%), Positives = 304/392 (78%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W +PA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDIIQYEHITPYEYARV  417
            HL+ERRLM+QWWAD+LD  +   I+P+EYA++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKI  390

177) TY21A_22985 in NC_021176


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  385 bits (1449),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 210/392 (54%), Positives = 304/392 (78%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W +PA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDIIQYEHITPYEYARV  417
            HL+ERRLM+QWWAD+LD  +   I+P+EYA++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKI  390

178) t4518 in NC_004631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  385 bits (1449),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 210/392 (54%), Positives = 304/392 (78%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W +PA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDIIQYEHITPYEYARV  417
            HL+ERRLM+QWWAD+LD  +   I+P+EYA++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKI  390

179) Y11_15011 in NC_017564


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  385 bits (1446),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 202/386 (53%), Positives = 303/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVNPSGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLVQNINPAQQR  85
            ++LLV+P+GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+ + ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERTTSSPEKTFKHVALEWHKSNRTWSENHAARLLASMNNHIFPIIGHLPVSELKPRHF  145
             A +  +  + +F H+A  WH SN+ W+++H+ ++L S++ H+FP+IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKGIEKKGSLEVAARTRQHMCSIMRHAVHQELIDNNPAANLDGIIAPPVKRHYPALP  205
            +  +++ E K   E+A+R +Q++ ++MR AV+  +I  NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LEQLSELLTRIEDYQQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L +L+ELL+RI  Y+ G+ +T+LAV L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSHQSITILKQIREISGHQELVFPGDHNPYKPMCENTVN  325
            ++PGV++S RG+KMRTPH+VPLS Q ++IL +++  +G++ L+F G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT +++CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLNACREAYIPPY  411
            L+ R+ M+QWW+D+L+A RE +I+P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

180) STBHUCCB_9400 in NC_016832


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  384 bits (1444),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 220/396 (56%), Positives = 302/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            MFL V P+GS+YW++ YR+ GK+K +++GVYP VSLS+AR +RDEAR+L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            +A     K   D   SF  +A+ W +++ +W++  +D V K LET VFP IG++D++ L+
Sbjct  61   RAK----KVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL+PV+  EA    E+A R+QQ I+A++R AVQ  +IR NPA DM GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P+LL++I+ YKG+ +T LA+ LNL++FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRKHLVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  HLVPL KQ + IL E++      + ++GLIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHDPRKP  292

Query  326  MSENTINKALRNMGYDTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDT QD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANSNDMVRPFEFD  421
            Y HKA HL++RRLMLQWWADFLDAN +  + PFE+ 
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYA  388

181) TY21A_04490 in NC_021176


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  384 bits (1444),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 220/396 (56%), Positives = 302/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            MFL V P+GS+YW++ YR+ GK+K +++GVYP VSLS+AR +RDEAR+L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            +A     K   D   SF  +A+ W +++ +W++  +D V K LET VFP IG++D++ L+
Sbjct  61   RAK----KVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL+PV+  EA    E+A R+QQ I+A++R AVQ  +IR NPA DM GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P+LL++I+ YKG+ +T LA+ LNL++FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRKHLVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  HLVPL KQ + IL E++      + ++GLIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHDPRKP  292

Query  326  MSENTINKALRNMGYDTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDT QD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANSNDMVRPFEFD  421
            Y HKA HL++RRLMLQWWADFLDAN +  + PFE+ 
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYA  388

182) t05065 in NC_004631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  384 bits (1444),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 220/396 (56%), Positives = 302/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            MFL V P+GS+YW++ YR+ GK+K +++GVYP VSLS+AR +RDEAR+L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            +A     K   D   SF  +A+ W +++ +W++  +D V K LET VFP IG++D++ L+
Sbjct  61   RAK----KVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL+PV+  EA    E+A R+QQ I+A++R AVQ  +IR NPA DM GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P+LL++I+ YKG+ +T LA+ LNL++FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRKHLVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  HLVPL KQ + IL E++      + ++GLIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHDPRKP  292

Query  326  MSENTINKALRNMGYDTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDT QD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANSNDMVRPFEFD  421
            Y HKA HL++RRLMLQWWADFLDAN +  + PFE+ 
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYA  388

183) W5S_1599 in NC_017845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  384 bits (1444),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 218/398 (55%), Positives = 304/398 (77%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFQGKQKVFSIGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA+KL++ G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADNKIVQERRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            +A +K+V + +    +F  +A+ W A++  W++     V   LET +FP IGN+DI+ L+
Sbjct  61   RA-KKVVPDLQL---SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKHQTEHR  205
            T DLL+P++  E     EIA R++Q  +A+MRYAVQ  +IR+NPA D+ GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAIELEEIPTLLERIEAYKGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA++L  +P LL RI +YKG++ +TQLA+ LNLL+F+RSSELR+ARWSEID+ +A+W IP
Sbjct  177  PALDLSRLPELLSRIGSYKGQP-VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  266  EERETIEGIKHSGRGAKMRRKHYVPLCNQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             ERE + G+K S RG+KMR  H VPL +Q +AIL EL+  +    G++G+I+TG  D+ K
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            P+SENT+NKALR MGYDT  D+CGHGFR++ACSALIESG+W+ D VE QMSH E+N VRA
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFGQ  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+++
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

184) intB in NC_014228


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  384 bits (1443),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 216/391 (56%), Positives = 313/391 (81%), Gaps = 2/391 (0%)

Query  26   LYLEITSRGSKYWRMKYRRPTDKKEDRLAFGVYPVVSLadarakrdeakkLIAQGADPKA  85
            ++L + + GS+YWR++YR     KE  LA+GVYP VSL++AR+KRDEA+KLI++G DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EKKGAQAESKGAPSFEQVAREWHASNKRWSEDHSNRILRSLEHYIFPHIGKLDISTLRTS  145
            +K++ +  +    SFE++AR WHASNK+W++ HS+++L+SLE  +FP IG+ DI+TL T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  QLLAPIKSVDADGKHDIAQRLQQRVTSIMRYAVQNDILESNPANDMSGALSTVKAKHHPA  205
            +LL P+++ +A    +IA RLQQR++++MRYAVQ++I+  NPA DM+GAL+TVK +H+PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPHERLPEFLTHLSHYRGRLITQIAVELTLLTFVRSSELRFARWEELDLENAVWKIPATR  265
            L   RLPE+L++++ Y+G+ +TQ+AV L LL F+RSSELR+ARW E+D++NA+W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  KPIEGVKCSERGMKMKTGHIVPLSRQAVSLFKTLQDLSGECEVMFPHNHNLAKVMSESTV  325
             P+ GVK S+RG KM+T H+VPLS+Q V+++  LQ  +GE  ++F   H+  K +SE+TV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRGMGYDTKTDVCGHGFRTMARGAMGESGLWNDDAIERQLSHVERKNVRAAYIHTSK  385
            N+ALR MGYDT  DVCGHGFR+MA +A+ ESGLW+ DA+ERQ+SH ER+ VRAAYIH + 
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERQLMVQWWADYLDANREKYITPYDFAK  416
            HL+ER+LM+QWWAD+LDANRE++I+P+++AK
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

185) Dd586_2635 in NC_013592


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  384 bits (1443),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 205/394 (53%), Positives = 308/394 (79%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINKKESRLGLGAYPDVSLADARQQRDGIRKLLVQNINPAQQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+ + ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERATALPEETFKSVALSWHKSNKAWSENHAVRLLASMNNHIFPIIGHLPVSELKPRHF  145
             A +  +  + +F  +A  WH SNK W+++H+ ++L S++ H+FP+IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgiekkglleVAARSRQHMCNIMRHAVHQELIDNNPAANLDGIIAPPVKRHYPALP  205
            +  +++ E K + E+A+R +Q++  +MR AV+  +I  NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LERLSELLTRIGDYKQGRELTRLAVSLTLHLFIRSSELRFAHWSEIDFKNNIWTIPANRE  265
            L RL+ELL+RIG YK G+ +T+LAV L L +FIRSSELR+A+WSEID+ N +WTIPA+RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSSQSITILKQIREISGHQELVFPGDHNPYKPMCENTIN  325
            ++PGV++S RG+KMRTPH+VPLS Q ++IL +++  +G++ L+F G H+P KP+ ENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKSDICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT  D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTNREEYVAPYIYAQQHET  419
            L+ R+ M+QWW+D+LD+NRE +++P+ YA+ ++ 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

186) ETAE_3092 in NC_013508


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  384 bits (1442),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 210/392 (54%), Positives = 304/392 (78%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYTFETIAREWHDSNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       +FE IAR WH SNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  YLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
             LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLDAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLDQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+VPLS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDSCHKHQIAPYEFARI  417
            HL+ERRLM+QWWAD+LD+ + + I+P+E+A+I
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKI  390

187) Dd703_2459 in NC_012880


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  383 bits (1439),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 217/398 (55%), Positives = 303/398 (77%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA+KL++ G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADNKTIQEKRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDISELD  145
            +A +K + + +    +F  +A+ W A++  W++     V   LET +FP IGN+DI+ L+
Sbjct  61   RA-KKVVPDLQL---SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL+P++  E     EIA R++Q  +A+MRYAVQ  +IR+NPA D+ GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAIELEEIPTLLERIESYKGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA++L  +P LL RI SYKG++ +TQLA+ LNLL+F+RSSELR+ARWSEID+ +A+W IP
Sbjct  177  PALDLSRLPELLSRIGSYKGQP-VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  266  EQREAIEGIKHSGRGAKMRRKHYVPLCDQALAILEELKDLTYDVNGDEGFILTGCYDAMK  325
             +RE++ G+K S RG+KMR  H VPL  Q +AIL EL+  +    G++G+I+TG  D+ K
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            P+SENT+NKALR MGYDT  D+CGHGFR++ACSALIESG+W+ D VE QMSH E+N VRA
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFSQ  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+++
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

188) Pecwa_1586 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  383 bits (1439),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 217/398 (55%), Positives = 304/398 (77%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA+KL++ G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADNKIVQERRNNTRAFKTVAKSWFTTKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            +A +K+V + +    +F  +A+ W +++  W++     V   LET +FP IGN+DI+ L+
Sbjct  61   RA-KKVVPDLQL---SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL+P++  E     EIA R++Q  +A+MRYAVQ  +IR+NPA D+ GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAIELEEIPTLLERIEAYKGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA++L  +P LL RI +YKG++ +TQLA+ LNLL+F+RSSELR+ARWSEID+ +A+W IP
Sbjct  177  PALDLSRLPELLSRIGSYKGQP-VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  266  EQREAIKGIKHSGRGAKMRRKHYVPLCHQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             +RE++ G+K S RG+KMR  H VPL  Q +AIL EL+  +    G++G+I+TG  D+ K
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            P+SENT+NKALR MGYDT  D+CGHGFR++ACSALIESG+W+ D VE QMSH E+N VRA
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFAQ  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

189) int in NC_011745


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  383 bits (1441),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 219/396 (56%), Positives = 304/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            MFL V P+GS+YW++ YR+ GK+K +++GVYP VSLS+AR +RDEAR+L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            +A     K   D   SF  +A+ W +++ +W++  +D V K LET VFP IG++D++ L+
Sbjct  61   RAK----KVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL+PV+  EA    E+A R+QQ I+A++R AVQ  +IR NPA DM GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P+LL++I+ YKG+ +T LA+ LNL++FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRKHFVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  H+VPL KQ + IL E++      + ++GLIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHDPRKP  292

Query  326  MSENTINKALRNMGYNTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGY+T QD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLEQRRLMLQWWADYLDASRNGMVRPFEFA  421
            Y HKA HLE+RRLMLQWWAD+LDA+R+  + PFE+A
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYA  388

190) A79E_1796 in NC_018522


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  382 bits (1435),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 219/396 (56%), Positives = 303/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            MFL V P+GS+YW++ YR+ GK+K +++GVYP VSLS+AR +RDEAR+L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPAIGDKDVAELD  145
            +A     K   D   SF  +A+ W +++ +W++  +D V K LET VFP IG++D++ L+
Sbjct  61   RAK----KVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKVEALGYLEVAMRTQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL+PV+  EA    E+A R QQ I+A++R AVQ  +IR NPA DM GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P+LL++I+ YKG+ +T LA+ LNL++FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRKHFVPLCKQAIRILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  H+VPL KQ + IL E++      + ++GLIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHDPRKP  292

Query  326  MSENTINKALRNMGYNTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGY+T QD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLEQRRLMLQWWADYLDASRNGMVRPFEFA  421
            Y HKA HLE+RRLMLQWWAD+LDA+R+  + PFE+A
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYA  388

191) Pecwa_0447 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  381 bits (1434),  Expect = 3e-107, Method: Compositional matrix adjust.
 Identities = 226/392 (58%), Positives = 318/392 (82%), Gaps = 3/392 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEIRLLLLEGIHPTekr  85
            ++LLV PNGS+ W L+YR+ GKE  +A+G YP +SL+ AR KRDE R L+ EG++P E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   eeekeqaqeaLNTFAKVAQDWHRNISQNRWSETHAGRVWRDMERNLLPAIGHRHIADLKT  145
               K  ++  L +F  +A+ WH   S+++W+++H+++V + +E +++P IG+R+I+ L+T
Sbjct  61   RAKKVVPDLQL-SFEHIARRWH--ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLSGAIAAPKATHRP  205
             DLL P++A E +   ++ASRL+QR++ +MRYAVQ+++I  NPA D++GA+++ K  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALKLNKLPDFLARIERHKGrtltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPAE  265
            AL L++LP++L+RI   KG+ +T+LA+ L L VFIRSSELR+ARW+EID+  AMWTIPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGAHELIFPGDRRPTKPMSENT  325
            RE++PGVK S+RG+KMR+ HLVPLS+Q +A+L E+++ +G + LIF G + P KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  326  VNNALRTMGYDTTIEVCGHGFRTMACSALVESGQWSRDAVERQMSHQERNGVRAAYIHKA  385
            VN+ALR MGYDTT +VCGHGFR+MACSAL+ESG WSRDAVERQMSHQERNGVRAAYIHKA
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  386  EHLDERRLMLQWWADYLDANREEYVVPYEFKR  417
            EHL+ERRLMLQWWAD+LDANRE ++ P+E+ +
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAK  389

192) Pecwa_1766 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  381 bits (1432),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 215/398 (55%), Positives = 304/398 (77%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVSLADARQRRDDAKKLLAAGIDPSAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RD+A+KL++ G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RADNKSVQEKRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            RA +K V + +    +F  +A+ W A++  W++     V   LET +FP IGN+DI+ L+
Sbjct  61   RA-KKVVPDLQL---SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL+P++  E     EIA R++Q  +A+MRYAVQ  +IR+NPA D+ GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAIELEEIPTLLERIDGYQGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA++L  +P LL RI++Y+G++ +TQLA+ LNLL+F+RSSELR+ARWSEID+ +A+W IP
Sbjct  177  PALDLSRLPELLSRIGSYKGQP-VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  266  EQREAIKGIKHSGRGAKMHRKHYVPLCDQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             +RE++ G+K S RG+KM+  H VPL  Q +AIL EL+  +    G++G+I+TG  D+ K
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            P+SENT+NKALR MGYDT  D+CGHGFR++ACSALIESG+W+ D VE QMSH E+N VRA
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFSN  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+++
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

193) intB in NC_004547


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  380 bits (1427),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 218/398 (55%), Positives = 301/398 (76%), Gaps = 9/398 (2%)

Query  26   MHLLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            M LLVHPNGS+YWRL YR+  K++ LALGVYP VSL++AR +RDEA+KL++ G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADNKTIQEKRNNTRAFKTVAKSWFSTKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            +A +K + + +    +F  +A+ W +++  W++     V   LET +FP IGN+DI+ L+
Sbjct  61   RA-KKVVPDLQL---SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLAPIKKIEKLGYLEIAMRVKQYTTAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL P++  E     EIA R++Q  +A+MRYAVQ  +IR+NPA D+ GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAIELEEIPTLLERIEGYQGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA++L  +P LL RI +Y+G++ +TQLA+ LNLL+F+RSSELR+ARWSEID+ +A+W IP
Sbjct  177  PALDLSRLPELLSRIGSYKGQP-VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  266  EQRQAIEGIKHSGRGAKMRRKHYVPLCDQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             +R+++ G+K S RG+KMR  H VPL  Q +AIL EL+  +    G++G+I+TG  D+ K
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            P+SENT+NKALR MGYDT  D+CGHGFR++ACSALIESG+W+ D VE QMSH E+N VRA
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANRNGMVRPFEFAQ  423
            AY HKA HLE+RRLMLQWWADFLDANR+  + PFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

194) intB in NC_004547


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  380 bits (1430),  Expect = 5e-107, Method: Compositional matrix adjust.
 Identities = 218/398 (55%), Positives = 302/398 (76%), Gaps = 9/398 (2%)

Query  26   LYLLVHTNGSKYWQLGYRFEGKQKVFSIGVYPAVSLANARQRRDEAKKLLAAGVDPSAKK  85
            ++LLVH NGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA+KL++ GVDP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RADNKSVQEKRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            RA +K V + +    +F  +A+ W A++  W++     V   LET +FP IGN+DI+ L+
Sbjct  61   RA-KKVVPDLQL---SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL+P++  E     EIA R++Q  +A+MRYAVQ  +IR+NPA D+ GA+   + +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAIELEEIPTLLERIEGYKGRSRLTQLAIKLNLLIFIRSSELRFARWSEIDFKSGLWVIP  265
            PA++L  +P LL RI +YKG++ +TQLA+ LNLL+FIRSSELR+ARWSEID+ +++W IP
Sbjct  177  PALDLSRLPELLSRIGSYKGQP-VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  266  EQREAIKGIKHSDRGAKMRRKHYVPLCEQALVILGELKDLTYDVNGDDGFILTGCYDAMK  325
             +RE++ G+K S+RG+KMR  H VPL  Q + IL+EL+  +    G++G+I+TG  D+ K
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            P+SENT+NKALR MGYDT  D+CGHGFR++ACSALIESG+W+ D VE QMSH E+N VRA
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANGSGMVRPFEFAQ  423
            AY HKA HLE+RRLMLQWWADFLDAN    + PFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

195) ECABU_c49370 in NC_017631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  380 bits (1428),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 207/332 (63%), Positives = 273/332 (83%), Gaps = 1/332 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  85
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  145
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            +L R+PELL +I+ Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            P+PGVK S+RGSKMRTPHLVPLSKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  357
             ALRVMGYDT  +VCGHGFR+MACS+LIESGL
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL  331

196) c5371 in NC_004431


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  379 bits (1425),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 206/332 (63%), Positives = 273/332 (83%), Gaps = 1/332 (0%)

Query  52   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  111
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  112  RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  171
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  172  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  231
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  232  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  291
            +L R+PELL +I+ Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  292  PIPGVKHSQRGSKMRTPHLVPFSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  351
            P+PGVK S+RGSKMRTPHLVP+SKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  352  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
             ALRVMGYDT  +VCGHGFR+MACS+LIESGL
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL  331

197) i14_4891 in NC_017652


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  379 bits (1425),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 206/332 (63%), Positives = 273/332 (83%), Gaps = 1/332 (0%)

Query  52   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  111
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  112  RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  171
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  172  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  231
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  232  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  291
            +L R+PELL +I+ Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  292  PIPGVKHSQRGSKMRTPHLVPFSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  351
            P+PGVK S+RGSKMRTPHLVP+SKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  352  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
             ALRVMGYDT  +VCGHGFR+MACS+LIESGL
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL  331

198) i02_4891 in NC_017651


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  379 bits (1425),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 206/332 (63%), Positives = 273/332 (83%), Gaps = 1/332 (0%)

Query  52   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  111
            M LLV P GS+YWR+R+R+ GK+  +A+GVYP+VSL++AR KR+EARKL++ G+DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  112  RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  171
            RA K     ++ +FE +AR W  +N++W++ H+++V KSLE ++FP IG R+I+ L T D
Sbjct  61   RAKKVVPDLQL-SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  172  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  231
            LLIP++A E     E+ASRLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  232  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  291
            +L R+PELL +I+ Y G+P+T+ A  L LL+FIRSSELR+ARWSEID++ +MWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  292  PIPGVKHSQRGSKMRTPHLVPFSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  351
            P+PGVK S+RGSKMRTPHLVP+SKQ +AIL +++   GE+ LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  352  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
             ALRVMGYDT  +VCGHGFR+MACS+LIESGL
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL  331

199) W5S_0459 in NC_017845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  378 bits (1420),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 227/393 (58%), Positives = 319/393 (82%), Gaps = 3/393 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLVSLAKAREKRDEIRLLLLEGIHPTekr  85
            ++LLV PNGS+ W L+YR+ GKE  +A+G YP VSL+ AR KRDE R L+ EG++P E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   eeekeqaqeaLNTFEKVAQDWHRNISQNRWSETHAGRVWRDMERNLLPAIGHRHIADLKT  145
               K  ++  L +FE +A+ WH   S+++W+++H+++V + +E +++P IG+R+I+ L+T
Sbjct  61   RAKKVVPDLQL-SFEHIARRWH--ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  KDLLEPLKVVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLSGAIAAPKATHRP  205
             DLL P++  E +   ++ASRL+QR++ +MRYAVQ+++I  NPA D++GA+++ K  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALKLNTLPDFLARIERHkgraltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPAE  265
            AL L+ LP++L+RI   KG+++T+LA+ L L VFIRSSELR+ARW+EID+  AMWTIPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGAHELIFPGDRRPTKPMSENT  325
            RE++PGVK S+RG+KMR+ HLVPLS+Q +A+L E+++ +G + LIF G + P KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  326  VNNALRTMGYDTTTEVCGHGFRTMACSALVESGQWSRDAVERQMSHQERNGVRAAYIHKA  385
            VN+ALR MGYDTT +VCGHGFR+MACSAL+ESG WSRDAVERQMSHQERNGVRAAYIHKA
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  386  EHLDERRLMLQWWADYLDANREEYVVPYEFKNV  418
            EHL+ERRLMLQWWAD+LDANRE ++ P+E+ ++
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAKI  390

200) SG1638 in NC_007712


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  377 bits (1418),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 216/391 (56%), Positives = 308/391 (79%), Gaps = 2/391 (0%)

Query  26   MYLEVTPRGSKYWRMKYHRPSDRKEDKLSFGVYPAITlaearakrdeakkllakGLDPKK  85
            M+L V P GS+YWR++Y+  +  KE  L++GVYP ++L+EAR+KRDEA+KL++ G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   VQKKEHAENNGEFTFESIARKWHSNNRRWENVTRNLILNSLEKYVFPIIGKNDIRQLKTR  145
             ++      + +++FE IAR+WH++N++W +   + +L+SLE  VFP+IG+ DI  L+T 
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAVVRAVEENGKHEVAQRIQQRITSIMRYAVQNEIIETNPALDMAGALIPPKSVHHPA  205
            +LL  VRA E +   E+A R+QQRI+++MRYAVQ+ II  NPALDMAGAL   K  H+PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LAPIMLPQFFARLTSYKGRKITRIAVELNLLTFVRSSELRFARWKEIDFEHALWEIPAKR  265
            L    LP++++R+ SYKG+ +T++AV LNLL F+RSSELR+ARW EID+++A+W IPA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EPIAGVRYSERGMKMKSSHLVPLSKQAIELLKQLKVQRGDEAHIFPGDHDIKGVMSENTV  325
            EP++GV++S+RG KM+++HLVPLSKQ + +L +L+   G+++ IF G HD +  +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NKALRVMGYDTKTEICGHGFRTMARGAMGESGLWADDVIELQMSHIERNGVKAAYLHTTK  385
            NKALRVMGYDT  ++CGHGFR+MA +A+ ESGLW+ D +E QMSH ERNGV+AAY+H + 
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLEERRLMMQWWADYLDANREHYISPYDFAK  416
            HLEERRLM+QWWAD+LDANRE++ISP+++AK
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

201) intB in NC_014228


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  377 bits (1419),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 211/393 (54%), Positives = 313/393 (80%), Gaps = 2/393 (0%)

Query  26   LYLEVTSRGSKYWRMKYRRPTDKKEDRLAFGVYPTVSladarakrdeakkllaQGINPKA  85
            ++L V + GS+YWR++YR     KE  LA+GVYP VSL++AR+KRDEA+KL+++G++P  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQSESEGVFTFEHIAREWRASNKRWSEDHSGRIMRSLEQYIFPHIGALDVRTLRTS  145
            +++  +  ++  ++FEHIAR W+ASNK+W++ HS+++++SLE  +FP IG  D+ TL T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLTPIKSVDINGKHDVAQRLQQRVTAIMRYAVQNGILEYSPANDMAGALTIVKSKHHAA  205
            +LL P+++ + +   ++A RLQQR++A+MRYAVQ+GI+ Y+PA DMAGALT VK +H++A
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPHECLPEFLTRLSCYRGRLITRIAVELTLLTFVRSSEMRFARWEEIDLERAVWCVPATR  265
            L    LPE+L+R++ Y+G+ +T++AV L LL F+RSSE+R+ARW EID++ A+W +PA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  KLIEGVKHSQRGMKMKTEHIVPLSRQAVLLIEKLHGLSGDSEVMFPGDHDPKKVMSENTV  325
              + GVK S+RG KM+T H+VPLS+Q V ++  L+  +G++ ++F G HDP+K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRAMGYDTKTEVCGHGLRTMARGAMGESGLWSDDAIERQLSHIERNNVRAAYIHTSK  385
            N+ALR MGYDT  +VCGHG+R+MA +A+ ESGLWS DA+ERQ+SH ERN VRAAYIH + 
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANREKHITPYDFAKTS  418
            HL+ERRLM+QWWAD+LDANRE+ I+P+++AK +
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKIN  391

202) ECO111_2624 in NC_013364


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  376 bits (1412),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 226/401 (57%), Positives = 306/401 (77%), Gaps = 16/401 (3%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKKLLAQGVDP----  81
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA+KL+++GVDP    
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  82   NAKKLADEKALQEKRDKTCSFRVVARSWFATKTKWSEDYADTVWKRLETYVFPDIGDSNV  141
             AKK+  +  L        SF  +AR W A++ +W++  +D V K LET VFP IG+ ++
Sbjct  61   RAKKVVPDLQL--------SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDI  112

Query  142  SDLDTGDLLVPIKNAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPE  201
            + L+T DLL+P++ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+    
Sbjct  113  TTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVK  172

Query  202  TEHRPAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRYARWSEIDFNSKLW  261
             +HRPAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELRYARWSEID+++ +W
Sbjct  173  RQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMW  232

Query  262  VIPEKREAIERVKYSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAGLIFTGCYD  321
             IP  RE++  VK+S RG+KM+  H+VPL +Q + IL E++      + E GLIFTG  D
Sbjct  233  TIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHD  288

Query  322  SFKPMSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNS  381
            + KP+SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+
Sbjct  289  PRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNG  348

Query  382  VRAAYTHKAKHLEQRRLMLQWWADYLDANRDGMVRPFEFAQ  422
            VRAAY HKA HLE+RRLMLQWWAD+LDANR+  + PFE+A+
Sbjct  349  VRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

203) E2348C_2119 in NC_011601


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  375 bits (1409),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 223/397 (57%), Positives = 308/397 (78%), Gaps = 8/397 (2%)

Query  26   LYLLLHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKKLLAQGIDPNAKK  85
            ++LL+HPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA+KL+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADEKALQEKRDKTRSFRVVARSWFATKTKWSEDYADTVWKRLETYVFPDIGDSNVSDLD  145
            +A  K + + +    SF  +AR W A++ +W++  +D V K LET VFP IG+ +++ L+
Sbjct  61   RAK-KVVPDLQ---LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRYARWSEIDFNSKLWVIPE  265
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELRYARWSEID+++ +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  KREVIERVKYSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNDAGLIFTGCYDSFKP  325
             RE +  VK+S RG+KM+  H+VPL +Q + IL E++      + + GLIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHDPRKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSKDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS+DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLEQRRLMLQWWADYLDANRDGMVRPFEFAQ  422
            Y HKA HLE+RRLMLQWWAD+LDANR+  + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

204) SeAg_B2068 in NC_011149


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  375 bits (1411),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 223/397 (57%), Positives = 308/397 (78%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKKLLAQGIDPNAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA+KL+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADEKALQEKRDKTRSFRVVARSWFATKTKWSEDYADTVWKRLETYVFPDIGDSNVSDLD  145
            +A  K + + +    SF  +AR W A++ +W++  +D V K LET VFP IG+ +++ L+
Sbjct  61   RAK-KVVPDLQ---LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCQQAITILKEIRQLTYEEGNDAGLIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  H+VPL +Q ++IL E++      + + GLIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW----AGENGLIFTGAHDPRKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANRDEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLDANR+  + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

205) Dd703_3034 in NC_012880


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  375 bits (1411),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 206/394 (53%), Positives = 310/394 (79%), Gaps = 1/394 (0%)

Query  25   LYLTVSASGAKLWYFRYRLGGKESRLAFGPYPQTTLAEAREKRDVARKLLASGISPSQLR  84
            ++L V ++G++ W +RYR+ GKE  LA+G YP+ +L+EAR KRD ARKL++ G+ P + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KANNPAVEESRTFQYVAQAWHTSSLKLWSEAHADKILTCLKRYVFPTIGAMDIAQVETRH  144
            +A++   +   +F+ +A+ WH+S+ K W+++H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVVTQHHPAl  204
            L   V+A + K + ++A+R++Q+++ +MR AVQ G+I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  plkrlpellekMENYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             L RLPELL ++ +YKG+ +T+LA+ LNL VF+RSSELR+ARW E+++   +W++PA+RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQALSGESVFVFPGAHTLNKPMSENTVN  324
            ++ GV+FS+RG+KM+  HLVPLS+Q VA+L ++Q+ +GE+ ++F GAH   KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  ++CGHGFR+MACSAL ESG WS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYARSHSA  418
            LE R  M+QWW+D+LD NRE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

206) Dd586_1478 in NC_013592


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  375 bits (1408),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 209/392 (54%), Positives = 307/392 (79%), Gaps = 1/392 (0%)

Query  26   LYLLINPGGSRLWYLKYRINRKESRLGLGTYPDVSLADARQQRDSIRKLLAQNINPAHQQ  85
            ++LL++P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAEKAPRSPEKSFRDVALDWHKSNRTWSESHATRLLASMNNHLFPVIGHLPVTELKPRHF  145
             A K     + SF ++A  WH SN+ W++SH+ ++L S++ H+FP IG+  +T L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  ISLLRGIEKKGLLEVAARTRQHLCNIMRHAVHQELIEHNPAANLDGIIASPVKRHYPAlp  205
            +  +R+ E K + E+A+R +Q++  +MR AV+  +I  NPA ++ G +++  ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  leqlpellTRIEDYRQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNHIWTIPATRK  265
            L +LPELL+RI  Y+ G+ +T+LAV L L +FIRSSELR+ARWSEID+ N +WTIPA R 
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQAIAILRQIQEISGHQVLIFPGAHNPYKPMCENTVN  325
            ++PGV++S RG+KMRTPH+VPLS+Q +AIL ++Q  +G++ LIF GAH+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESSLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT +++CGHGFRAMACSAL+ES+LW++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMNRENYVAPYVYAQVT  417
            L+ R+ M+QWW+D+LD NRE +++P+ YA++ 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKIN  391

207) SG1996 in NC_011274


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  372 bits (1398),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 224/397 (57%), Positives = 308/397 (78%), Gaps = 8/397 (2%)

Query  48   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  107
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA++L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  108  QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  167
            +A  KV+ + +    SF  +A+ W A++ +W++  +D V K LET VFP IG+R+++ L+
Sbjct  61   RAK-KVVPDLQ---LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  168  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  227
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  228  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  287
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  288  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKELRQLTYEEGNEAELIFTGCYDSFKP  347
            +RE++  VK S RG+KM+  H+VPL +Q + IL EL+  + E+G    LIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENG----LIFTGAHDPRKP  292

Query  348  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  407
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  408  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  444
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

208) SEN1970 in NC_011294


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  370 bits (1392),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 223/397 (57%), Positives = 308/397 (78%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLTQGIDPNAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA++L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            +A  KV+ + +    SF  +A+ W A++ +W++  +D V K LET VFP IG+R+++ L+
Sbjct  61   RAK-KVVPDLQ---LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  H+VPL +Q + IL E++  + E+G    LIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENG----LIFTGAHDPRKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

209) SPUCDC_0925 in NC_022221


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  370 bits (1392),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/397 (57%), Positives = 308/397 (78%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA++L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            +A  KV+ + +    SF  +A+ W A++ +W++  +D V K LET VFP IG+R+++ L+
Sbjct  61   RAK-KVVPDLQ---LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  H+VPL +Q + IL E++  + E+G    LIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENG----LIFTGAHDPRKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

210) SPUL_0925 in NC_016831


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  370 bits (1392),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/397 (57%), Positives = 308/397 (78%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA++L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            +A  KV+ + +    SF  +A+ W A++ +W++  +D V K LET VFP IG+R+++ L+
Sbjct  61   RAK-KVVPDLQ---LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  H+VPL +Q + IL E++  + E+G    LIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENG----LIFTGAHDPRKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

211) I137_04205 in NC_021984


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  370 bits (1392),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 223/397 (57%), Positives = 308/397 (78%), Gaps = 8/397 (2%)

Query  44   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  103
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA++L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  104  QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  163
            +A  KV+ + +    SF  +A+ W A++ +W++  +D V K LET VFP IG+R+++ L+
Sbjct  61   RAK-KVVPDLQ---LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  164  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  223
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  224  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  283
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  284  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  343
            +RE++  VK S RG+KM+  H+VPL +Q + IL E++  + E+G    LIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENG----LIFTGAHDPRKP  292

Query  344  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  403
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  404  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  440
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

212) SeD_A2305 in NC_011205


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  369 bits (1388),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 223/397 (57%), Positives = 305/397 (77%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  85
            ++LLVHPNGS+YW+L YR+ GK+K +++GVYP VSL++AR +RDEA++L+++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            +A   V     D   SF  +A+ W A++ +W++  +D V K LET VFP IG+R+++ L+
Sbjct  61   RAKKVV----PDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL+PV+ AE+    EIA R++Q I+A++R AVQ  ++R NPA DM GA+     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PAL+L  +P LL RI++YKG+ +T LA+ LNLL+FIRSSELR+ARWSEID+ + +W IP 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE++  VK S RG+KM+  H+VPL +Q + IL E++  + E+G    LIFTG  D+ KP
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENG----LIFTGAHDPRKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            +SENT+NKALR MGYDTTQD+CGHGFR++ACSALIESGLWS DAVE QMSH+E N+VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YPHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

213) CFSAN002050_16945 in NC_021818


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  369 bits (1388),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 209/394 (54%), Positives = 302/394 (77%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRFNRKESRIALGAYPQVSLSDARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YR+  KE  +ALG YP+VSLS+AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   MTEKAAASPEKCFEAVAVAWHKTNKKWSADYAERILASMKNHIFPAIGHLPVTMLKTQHF  145
             + K  +  +  FE +A  WH +NK+W+   ++++L S+  H+FP IG+  +T L+T ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  TALLKVIEDKGFLEVASRTRQQLCNIMRYAVQQGLTESNPAQHLEGVTAPPVKNHYPAlp  205
               ++  E K + E+ASR +Q++  +MRYAVQ G+   NPA ++ G  +   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpelferIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L RLPEL+ RIG Y+ G+ +T+LAV+L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  TIEKVRFSGRGAKMRTPHIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTIN  325
             +  V+FS RG+KMRTPH+VPLS+Q +AIL +++  +G+  L+F G H+P KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  RALRLMGYDTKTDVCGHGFRTMACSALVESELWSRDAVERQMSHQERNSVRAAYIHRAEH  385
            +ALR+MGYDT  DVCGHGFR+MACSAL+ES LWSRDAVERQMSHQERN+VRAAYIH+AEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKDMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R+ M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

214) int in NC_011740


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  369 bits (1386),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 215/394 (55%), Positives = 305/394 (78%), Gaps = 4/394 (1%)

Query  49   LYLLVRKTGGKYWRMNYRFDGKQVTLALGVYPDVSLATARKRRDEARQLLADGRDPREAK  108
            ++LLV+  G++YWR+ YR+ GK+ TLALGVYP+VSL+ AR +RDEAR+L+++G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  109  KPKKEDP-ISPTFESVAREWHSGTMGHPEWKEITRKKILREMENHLFPAIGSKPIDTLKT  167
            ++KK  P +  +FE +AR WH++     +W +    K+L+ +E H+FP IG++ I TL+T
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNK---QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  168  RDLMPMLVEMTEKGIGATTSRVKTTMTSIFRYAVQRGIVDYNPAHDLKGAITAPKVRHrp  227
             DL+  +     K I   +SR++  ++++ RYAVQ GI+ YNPA D+ GA+T+ K +HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  228  alplerlpellaKTRSYTGRPLTRLAVLFSLHTFVRSSELRHARWEEIDIENGLWTIPGQ  287
            AL L RLPELL++  SY G+P+T+LAV+++L  F+RSSELR ARW EIDI+N++WTIP++
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  288  REEIAGVKFSDRGAKMGAAHYVPLSSQAIGVLEDIRKISGEYLLVFPGDSNPYKPMSENT  347
            RE ++GVKFS+RG+KM ++H VPLS Q +++L +++  +GE  L+F G  +P KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  348  VNKALRTMGYDTQTDVCLHGFRAMACSALTESGLWSRDAVERQMSHQERNEVRAAYVHLA  407
            VNKALR MGYDT  DVC HGFRAMACSAL ESGLWSRDAVERQMSHQERN VRAAY+H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  408  QHMQERRRMMQWWSNYLELNKDEFHAPYDLSGIN  441
            +H++ERR M+QWW+++L+ N++ F +P++ + IN
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAKIN  391

215) Dda3937_00080 in NC_014500


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  369 bits (1386),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 304/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGTYPDVSLADARQQRDGIRKLLAQNINPAHQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAEKASRSPEKSFRDVALDWHKSNRTWSENHATRLLASMNNYLFPVIGHLPVTELKPRHF  145
             A K     + SF ++A  WH SN+ W+++H+ ++L S++  +FP IG+  +T L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLRGIEKKGLLEVASRTRQHLCNIMRHAVHQELIEHNPAANLDGIIATPVKRHYPAlp  205
            +  +R+ E K + E+ASR +Q++  +MR AV+  +I  NPA ++ G ++T  ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  leqlpellTRIEDYRQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNNIWTIPATRK  265
            L +LPELL+RI  Y+ G+ +T+LAV L L +FIRSSELR+ARWSEID+ N +WTIPA R 
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQTIAILRQIQEISRHQVLIFPGAHNPYKPMCENTVN  325
            ++PGV++S RG+KMRTPH+VPLS+Q +AIL ++Q  + ++ LIF GAH+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAQY  385
            KALR+MGYDT +++CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN+VRAAYIHKA+ 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMNREGYVAPYVYAR  415
            L+ R+ M+QWW+D+LD NRE +++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

216) EbC_39600 in NC_014306


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  368 bits (1383),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 214/391 (55%), Positives = 306/391 (79%), Gaps = 2/391 (0%)

Query  26   LYLEVTTKGSKYWRMKYRRPADKKEDRLAFGVWPTVTLaearakrdeakkMLGQGIDPka  85
            ++L V  +GS+YWR++YR  +  KE  LA+GV P V+L+EAR+KRDEA+K++++G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   eqkeaqaeNAGAYTFETIAREWHASNKRWSDDHRSRIMRYLELYIFPHIGLADVRRLKTS  145
            +++  +       +FE IAR WHASNK+W++ H  ++++ LE  +FP IG  D+  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  QLLAPIKSVDASGRHDVAQRLQQRVTAIMRYAVQNDYIESNPAVDMAGALSTVKARHYPA  205
            +LL P+++ +A    ++A RLQQR++A+MRYAVQ++ I  NPA+DMAGAL+TVK +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPFSGFPEFLERLAAYRGRIMTRIAVELSLLTFVRSSELRFARWDEFDFERALWRVPAQR  265
            L +S +PE+L R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D++ A+W +PA+R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  KEIEGVRYSHRGMKMKEEHLVPLSSQVLALLEKLKQLSGDNERLFPGDHDPKKVMSENTV  325
              + GV++SHRG KM+  HLVPLS QV+A+L  L+  +G+N  +F G HDP+K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N+ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERCLMVQWWADYLSINRECYISPFDYAK  416
            HL+ER LM+QWWAD+L  NRE +ISPF+YAK
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

217) SPAB_01138 in NC_010102


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  368 bits (1383),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 210/394 (54%), Positives = 301/394 (77%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRFNRKESRIALGAYPQVSLSDARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YR+  KE  +ALG YP+VSLS+AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   MTEKAAASPEKCFEAVAVAWHKTNKKWSADYAERILASMKNHIFPAIGHMPVTMLKTQHF  145
             + K  +  +  FE +A  WH +NK+W+   ++++L S+  H+FP IG+  +T L+T ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  TALLKVIEDKGFLEVASRTRQQLCNIMRYAVQQGLTENNPAQHLEGVTAPPVKNHYPAlp  205
               ++  E K + E+ASR +Q++  +MRYAVQ G+   NPA ++ G  +   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpelferIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWSEIDFRHKIWTIPATRE  265
            L RLPEL+ RIG Y+ G+ +T+LAV+L L +FIRSSELR+ARWSEID+ + +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  TIEKVRFSGRGAKMRTPHIVPLSWQSIAILKQIQEISGHLELVFPGDHNPYKPMSENTIN  325
             +  V+FS RG+KMRTPH+VPLS Q +AIL ++Q  +G+  L+F G H+P KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  RALRLMGYDTKADVCGHGFRAMACSALVESELWSRDAVERQMSHQERNSVRAAYIHRAEH  385
            +ALR+MGYDT  DVCGHGFRAMACSAL+ES LWSRDAVERQMSHQERN+VRAAYIH+AEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R+ M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

218) Pecwa_3419 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  368 bits (1382),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 205/390 (53%), Positives = 306/390 (79%), Gaps = 1/390 (0%)

Query  25   LYLTVSTSGAKLWYFRYRFGGKENRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            ++L V  +G++ W +RYR+ GKE+ LA+G YP+ +L+EAR KRD ARKL++ G+ P + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KSNNPAVDESRTFQYVATAWHTSSLKLWSDAHADKILICLKRYVFPAIGAMDIAQVETRH  144
            ++++   D   +F+ +A  WH+S+ K W+++H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   V+A + K + ++A+R++Q+++ +MR AVQ G+I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  PLKRLPELLVKMENYKGRELTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             L RLPELL ++ +YKG+ +T+LA+ LNL VF+RSSELR+ARW E+++   +W++PA+RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVKGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+FS+RG+KM+  HLVPLS+Q VA+L ++Q+ +GE+ ++F GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  ++CGHGFR+MACSAL ESG WS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE +++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

219) M621_16100 in NC_021659


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  368 bits (1383),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 202/390 (52%), Positives = 302/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERATALLEETFKSVALSWHKSNRTWSENHATRLLASMNNHIFPIIGHLPVSELKPRHF  145
             A +  + L+ +F  +A  WH SN+ W+++H+ ++L S++ H+FP+IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKGIEQKGLLEVAARTRQHMCNIMRHAVHQELIKHNPAANLDGIIAPPVKRHYPAlp  205
            +  +++ E K + E+A+R +Q++  +MR AV+  +I+ NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  leqlpellTRIKDYKQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFKNRIWTIPATRE  265
            L +LPELL+RI  YK G+ +T+LAV L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  SIPGVRYSGRGAKMRIPHIVPLSCQSIAILKQIREISGHQVLVFPGDHNPYKPMCENTVN  325
            ++PGV++S RG+KMR PH+VPLS Q +AIL +++  +G++ L+F G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT +++CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMCRKEYAPPYICGK  415
            L+ R+ M+QWW+D+LD  R  + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

220) KPK_1811 in NC_011283


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  367 bits (1380),  Expect = 5e-103, Method: Compositional matrix adjust.
 Identities = 209/387 (55%), Positives = 301/387 (78%), Gaps = 1/387 (0%)

Query  26   LYILVKPGGSRHWYLKYRINGKESRLGLGAYPNVSLTDARQQRDDIRKLLAQKINPAQQR  85
            +++LV P GSR W L+YRI GKE  L+LG YP+VSL++AR +RD+ RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   LTEKAARSPEKAFKAVALNWHKSNKTWSEDHANRVLGRMNNHIFPIIGHLTVTELKVQHF  145
             + K     + +F  +A  WH SNK W++ H+++VL  ++ H+FP+IG+  +T L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  INLLKGVENKGLLEIASRTRQYISSIMRHALHQGLIEHNPAADLKGVTVPPIKRHYPAlp  205
            +  +++ E K + EIASR +Q IS++MR A++ G+I  NPA D+ G      ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellkrIDDYKQGRELTQLAIMLSLHVFIRSSELRFARWPEINFRNRLWTIPATRE  265
            L RLPELL RI+ YK G+ +TQLA+ML+L VFIRSSELR+ARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  TIPNVRNSGRGAKMRAQHIVPLSQQAIDILKQIREISGDQVLIFPSIRDPYKPMSENTIN  325
             +P V+ S RG+KMR+ H+VPLS+Q + IL +++  +G++ LIF + +DP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMDYDTKEDVCGHGFRAMACSALIESGLWSEDAIERQMSHQERNSVRAAYIHKAEH  385
            KALR+M+YDT +DVCGHGFRAMACSALIESGLWS DA+ERQMSHQERN+VRAAYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYIDECREKYVPPYN  412
            LE R+ M+QWW+D++D  RE++++P++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFE  386

221) SBO_4174 in NC_007613


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  367 bits (1380),  Expect = 5e-103, Method: Compositional matrix adjust.
 Identities = 211/395 (54%), Positives = 310/395 (79%), Gaps = 2/395 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTlaqarakrdqakkllaqGIDPKA  85
            ++L V ++GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRD+A+KL+++G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEAQAENSGAYSFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
            +++  +       SFE IAR WHASNK+W++ H  +VL+ LE  +FP IG+ DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LL P++  +A    ++A RLQQR++A+MRYAVQ++ I  NPA DMAGAL+T K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L  SR+PE+L+R+++Y+G+ +T++AV L+LL F+RSSELR+ARW E+D+D+++W +PA R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVQLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTV  325
            E + GV++S RG KM+  H+V LS+Q + +L +L+  +G++ L+F G HD+ K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNNVRAAYIHTSE  385
            N ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLQANKGKTITPYDFAKINKS  420
            HL+ERRLM+QWWAD+L+AN+ + I+P+++AKIN++
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

222) int in NC_011745


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  367 bits (1379),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 216/390 (56%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  ++  E K + E+ASR +Q++S +MR AV+ G+I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMSHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR +H+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

223) PC1_0858 in NC_012917


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  367 bits (1379),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 201/390 (52%), Positives = 306/390 (79%), Gaps = 1/390 (0%)

Query  25   LYLTVSTSSAKLWYFRYRFGGKENRLAFGPYPQITlaearekrdaarkllaSGISPSQLR  84
            ++L V  ++++ W +RYR+ GKE+ LA+G YP+++L+EAR KRD ARKL++ G+ P + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KSNNPAVDESHTFQYVTMAWHSSCLKLWSEAHADKILTCLKRYVFPAIGAMDIVQVETRH  144
            ++++   D   +F+ ++  WH+S  K W+++H+DK+L  L   VFP IG  DI  ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVATQHHPAL  204
            L   V+A + K + ++A+R++Q+++ +MR AVQ G+I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  PLKRLPELLGKMENYKGRMLTRMALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             L RLPELL+++ +YKG+ +T++A+ LNL VF+RSSELR+ARW E+++   +W++PA+RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+FS+RG+KM+  HLVPLS+Q VA+L ++Q+ +GE+ ++F GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  +VCGHGFR+MACSAL ESG WS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSNYLDVNRDGYVAPYIYAR  414
            LE R  M+QWW+++LD NR+ +++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

224) LHK_01737 in NC_012559


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  367 bits (1378),  Expect = 8e-103, Method: Compositional matrix adjust.
 Identities = 220/414 (54%), Positives = 306/414 (74%), Gaps = 20/414 (4%)

Query  30   LYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQFALVDDKGKARAEQVIMSLADARLHCD  89
            ++LL++PNGS+YWR+ YRI GK+KTLA+GVY +                +SL++AR   D
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPE----------------VSLSEARTKRD  44

Query  90   AARAMLAKGIDPFETKQEAKKAANGLSPGSFAYVAREWHAKMANKWVPSHAANVLGRLER  149
             AR +++ G+DP E K+ AKK   +L   SF  +AR WHA   ++W  SH+ +VL  LE 
Sbjct  45   EARKLISEGVDPCEQKR-AKKVVPDLQL-SFEHIARRWHAS-NKQWAQSHSDKVLKSLET  101

Query  150  YIFPDIGHMPFAEIRTKHMLMALRKVEAKNILDVTSRLRQYLKQIGRYAVQTGRIDFNPG  209
             +FP IG+  ++ + T ++L+++R  EAK+I +++SRL+Q +  + RYAVQ+G I +NP+
Sbjct  102  HVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPA  161

Query  210  NDLDGALQTRRTVHRPALSLNRLPELLERIDAAKLRPLTRAAISLTLLTFVRSSELRFAR  269
             D+ GAL T +  HRPAL L+RLPELL RI++ K +P+T+ A+ L LL F+RSSELR+AR
Sbjct  162  LDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYAR  221

Query  270  WEEIDFDRAVWLIPGEREALPGVKFSSRGAKMRTPHLVPLCQQALALFREVHAITGRFEL  329
            W EID+D A+W IP+ERE+LPGVKFS RG+KMRTPHLVPL +Q +A++ E+++ +G   L
Sbjct  222  WSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGL  281

Query  330  VFAGDHDPYKPMSESTVNIALKRMGYDTKTEVCGHGFRAMACSALSESGQFSIEAIERQM  389
            +F+G HDP KP+SE+TVN AL+ MGYDT  +VCGHGFRAMACSAL ESG  S +A+ERQM
Sbjct  282  IFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQM  341

Query  390  SHQERDSVRAAYTHKAEFLTERRDMMGWWADFLDAQREGTYIEPLEFKRGESNV  443
            SHQER++VRAAY HKAE L ERR M+ WWADFLDA+RE  +I P+E+ + ++ +
Sbjct  342  SHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANRE-RFISPFEYAKINNPL  394

225) Dd1591_1514 in NC_012912


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  365 bits (1371),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 210/394 (54%), Positives = 309/394 (79%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAEKAPRSPEKSFRDVALDWHKSNRTWSESHATRLLASMNNHLFPVIGHLPVTELKARHF  145
             A K     + SF ++A  WH SN+ W++SH+ ++L S++ H+FP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgiekkglleVAARTRQHLCNIMRYAVHQELIEHNPAANLDGIIAPPVKRHYpalp  205
            +  +++ E K + E+A+R +Q++  +MRYAV+  +I  NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  leklpellaRIEDYKQGRELTRMAVSLTLHLFIRSSELRFARWSEIDFRNHIWTIPATRE  265
            L +LPELL+RI  YK G+ +T++AV L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQSITILKQIREISGHQELIFPGDHNPYKPMCENTVN  325
            ++PGV++S RG+KMRTPH+VPLS+Q ++IL +++  +G++ LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT +++CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARQAMMQWWSDYLDMNRESYVAPYVYAQQHKT  419
            L+ R+ M+QWW+D+LD NRE +++P+ YA+ ++ 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

226) SbBS512_E0979 in NC_010658


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  365 bits (1370),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 209/394 (54%), Positives = 303/394 (77%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRIWYLKYRFNGKESRVSLGAYPLVSLAEARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YR+ GKE  ++LG YP VSL+EAR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   MAEKSACSPEKCFKAVALAWHKTNKKWSADYAARILASMENHIFPAVGHLPVAALKTQDF  145
             A K     +  F  +A  WH +NK+W+   + ++L S+E H+FP +G+  +++L+T D+
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  TALLRVIENKGFLEVASRTRQQLSNIMRYAVQQGLTDSNPAQHLEGVTASPVKNHYPAlp  205
               +R  E K + E+ASR +Q++S +MRYAVQ G+   NPA ++ G  ++  ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpelldrIGDYRQGRELTRLAVVLTLHLFIRSSELRFARWSEIDFRHKIWTIPATRE  265
            L RLPELL RIG Y+ G+ +T+LAV+L L +FIRSSELR+ARWSEID+ + +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIDKVRFSGRGAKIRTPHIVPLSCQAIAILKQIQELSGHLDLVFPGDHNPYKPMSENTTN  325
            ++  V+FS RG+K+RTPH+VPLS Q +AIL ++Q  +G+ +L+F G H+P KP+SENT N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  RALRLMGYDTKTEICGHGLRAMACSALVESDLWSRDTVERQMSHQERNSVRAAYVHKAEH  385
            +ALR+MGYDT  ++CGHG+RAMACSAL+ES+LWSRD+VERQMSHQERN+VRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDVCREGYVAPYIYARQHEA  419
            LE R+ M+QWW+D+LD  RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

227) ST548_p7750 in NC_020181


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1369),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 214/386 (56%), Positives = 296/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L S++ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  ++  E K + E+ASR +Q++S +MR AV+ G+I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RI +Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R  ++SP+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

228) plu4460 in NC_005126


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1368),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 212/391 (55%), Positives = 306/391 (79%), Gaps = 2/391 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPTDKKEDRLAFGVYPVISLADARAKRNEAKKLIANGIDPKA  85
            ++L + P GS+YWR++YR     KE  LA+GVYP +SL++AR+KR+EA+KLI++G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   TQKETQAEASGEFNFETIARKWHSSNKRWGDYNRARVLRSLEQYIFPHIGKIDIRQLKTR  145
             ++  +  +  +++FE IAR+WH+SNK+W++ +  +VL+SLE  +FP IG+ DI  L+T 
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  ELLVPIkavddadkvdvakRLQQCVTAIMRYAVQCGIIESNPALDMAGALSTTKTEHHpa  205
            +LL+P++A +  +  ++A RLQQ ++A+MRYAVQ GII  NPALDMAGAL+T K +H+PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  lppsrlpellerTALFKGREVTRIAIEFGLLTFVRASKLRFVRWDEFDFDNAIWEIPGKR  265
            L  SRLPELL R + +KG+ VT++A+ + LL F+R+S LR+ RW E+D+DNA+W IP+ R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EAIENVKFSERGMKMKTPHIVPLSSQAMALLEKLKEYSGDNRCLFPGDRDPNKVMSENTV  325
            E++  VKFS+RG KM+TPH+VPLS Q +A+L  L+  +G+N  +F G +DP K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NKALRVMGYDIKTEICYHGFRTMARGAMGESGIWADDVIERQLSHLERNNVKAAYLHTSH  385
            NKALRVMGYD   ++C HGFR+MA +A+ ESG+W+ D +ERQ+SH ERN V+AAY+H ++
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  HLDECRLMLQWWADYLDANRQGFISPYDYAQ  416
            HL+E RLMLQWWAD+LDANR+ FISP++YA+
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

229) A79E_1748 in NC_018522


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1368),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 212/393 (54%), Positives = 304/393 (78%), Gaps = 1/393 (0%)

Query  26   LYLLVKPGGSHLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GS+ W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMPEKMFKTVALAWHSSNKKWSQNTADRLLASLNNHIFPVIGHLSVSELKPRHF  145
             A +     +  F  +A  WH+SNK+W+Q+ +D++L SL+ H+FP IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKGIEVKGLLEVASRTRQHLSNIMRYAVHQGLIDSNPAANLDGVTTPPVRHHYPAlq  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  T   R+H PAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDGYHQGRELTRLAVLLTLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RI++Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSGRGAKMRTAHIVPLSEQAIAILKQIKEISGVYELVFPGDHNPYKPMCENTVN  325
            +++GV++S RG+KMRT+H+VPLS Q +AIL +++  +G   L+F G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYNTKQDICGHGFRTMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR+MGY+T QD+CGHGFR+MACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDVCRKTYVPPYIQGQINQ  418
            LE R+ M+QWW+D+LD  R  +++P+  ++IN+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINN  392

230) Pecwa_1693 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1369),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 206/394 (53%), Positives = 311/394 (79%), Gaps = 1/394 (0%)

Query  26   LYLLVNSSGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+++GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERTTSSPEKTFKHVALEWHKSNRSWSENHAARLLASMNNHIFPIIGHLPVTELKTRHF  145
             A +  +  + +F H+A  WH SN+ W+++H+ ++L S++ H+FP+IG+  +T L+T ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgiekkglleVTARTRQHMCNIMRHAVHQELIENNPAANLDGIIAPPVKRHYpalp  205
            +  +++ E K + E+++R +Q++  +MR AV+  +I  NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellaSIEDYKQGRELTRLAVSLTLHLFIRSSELRFARWSEINFRNKIWTIPATRE  265
            L RLPELL+ I  YK G+ +T+LAV L L +FIRSSELR+ARWSEI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  SIPGVRYSGRGAKMRTPHIVPLSRQSIAILKQIRDISGHQELIFPGDHNPYKPMCENTVN  325
            ++PGV++S RG+KMRTPH+VPLS+Q +AIL +++  +G++ LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKDEVCGHGFRTMACSALMESGVWPQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT ++VCGHGFR+MACSAL+ESG+W++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTNREGYIAPYIYAQQHKT  419
            L+ R+ M+QWW+D+LD+NRE +I+P+ YA+ ++ 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

231) KOX_24355 in NC_016612


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1369),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 200/390 (52%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAHNINPAQQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERSTSSPDKTFKYVALDWHKSNRTWSENHASRLLASMNNHIFPVIGHLPVAELKPRHF  145
             A +  +  + +F  +A  WH SN+ W+++H+ ++L S++ H+FP IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKGIEQKGLLEVAARTRQHMCNIMRHAIHQELIENNPAANLEGIISPPVKRHYPALQ  205
            +  +++ E K + E+A+R +Q++  +MR A++  +I  NPA ++ G ++   ++H PAL+
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LERLPELLARIEDYKQGREltrlavlltlhlFIRSSELRFARWSEIDFKNRIWTIPATRE  265
            L RLPELL+RI  YK G+ +T+LAV+L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AISGVRYSGRGAKMRTPHIVPLSRQSIAILKQIREISGHRVLIFPGDHNPYKPMCENTVN  325
            +++GV++S RG+KMRTPH+VPLS+Q +AIL +++  +G+  LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMRYDTKNEICGHGLRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+M YDT +++CGHG+RAMACSAL+ESGLW++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDSRKAMMQWWSDYLDMCRKAYAPPYICGK  415
            L+ R+ M+QWW+D+LD  R  + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

232) CKO_00953 in NC_009792


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1367),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 214/386 (56%), Positives = 296/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L S++ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  ++  E K + E+ASR +Q++S +MR AV+ G+I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RI +Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R  ++SP+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

233) A79E_1743 in NC_018522


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1367),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 214/386 (56%), Positives = 296/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L S++ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  ++  E K + E+ASR +Q++S +MR AV+ G+I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RI +Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R  ++SP+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

234) KPR_3398 in NC_021232


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  364 bits (1367),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 214/386 (56%), Positives = 296/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L S++ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  ++  E K + E+ASR +Q++S +MR AV+ G+I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RI +Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R  ++SP+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

235) SBO_1221 in NC_007613


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  363 bits (1363),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 206/394 (53%), Positives = 300/394 (77%), Gaps = 1/394 (0%)

Query  26   LYLLVNQGGSRIWYLKYRFSGKESRVSLGAYPLVSLAEARQRRDDIRKLLTQNINPAHQR  85
            ++LLV+  GSR W L+YR+ GKE  ++LG YP VSL+EAR +RD+ RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   MSDKAAASPEKYFKAVALAWHKTNKKWSPDYAARILASMENHIFPAIGHLPVTTLKTQNF  145
             + K  +  +  F  +A  WH +NK+W+   + ++L S+E H+FP IG+  +TTL+T ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  TALLRVIEDKGFLEVASRTRQQLCNIMRYAVQQGFTENNLAQHLEGVTAPPVKNHYPAlp  205
               +R  E K + E+ASR +Q++  +MRYAVQ G+   N A ++ G  +   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpelferIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWGEIDFRNKIWTIPATRE  265
            L RLPEL+ RIG Y+ G+ +T+LAV+L L +FIRSSELR+ARW+EID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIEKVRFSGRGAKMRTPYIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTVN  325
            ++  V+FS RG+KMRTP +VPLS+Q +AIL +++  +G+  L+F G H+P KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  RALRLMGYDTKTDVCGHGFRTMACSALVETELWSRDTVERQMSHQERNSVRAAYIHRAEH  385
            +ALR+MGYDT  DVCGHGFR+MACSAL+E+ LWSRD+VERQMSHQERN+VRAAYIH+AEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARTAMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R  M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

236) W5S_1636 in NC_017845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  363 bits (1364),  Expect = 9e-102, Method: Compositional matrix adjust.
 Identities = 209/394 (54%), Positives = 307/394 (78%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLVQNINPAQQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+ + ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERSTSSPEETFKSVALSWHKSNRAWSENHAARLLASMNNHIFPIIGHLPVTELKTRHF  145
             A +  +  + +F  +A  WH SN+ W+++H+ ++L S++ H+FP+IG+  +T L+T ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgiekkglleVAARTRQHMCNIMRHAVHQELIEHNPAANLDGIVAPPVKRHYpalp  205
            +  +++ E K + E+A+R +Q++  +MR AV+  +I  NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellaSIEDYKQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L RLPELL+ I  YK G+ +T+LAV L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQSVAILKQIREISGHQELIFPGDHNRYKPMCENTVN  325
            ++PGV++S RG+KMRTPH+VPLS+Q VAIL +++  +G++ LIF G H+  KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALRVMGYDT +++CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTNREEYVAPYIYAQQHKT  419
            L+ R+ M+QWW+D+LD+NRE +++P+ YA+ ++ 
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

237) ROD_20671 in NC_013716


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  362 bits (1361),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 212/394 (54%), Positives = 301/394 (77%), Gaps = 1/394 (0%)

Query  26   LYLLVKPGGSRIWYLKYRFNGKESRVSLGAYPLVSLAEARLQRDGIRKLLAQNISPAQQR  85
            ++LLV P GSR W L+YR+ GKE  ++LG YP VSL+EAR +RD  RKL+++ + P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   VaakaaaSPEKCFEAVALAWHKTNKKWSADYAERILASMKNHIFPAIGHMPVTLLKTQHF  145
             A K  +  +  FE +A  WH +NK+W+   ++++L S+  H+FP IG+  +T L+T ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  TALLKVIEDKGFLEVASRTRQQLCNIMRYAVQQGFIENNPAQHLEGVTAPPVKNHYPAlp  205
               ++  E K + E+ASR +Q++  +MRYAVQ G+I  NPA ++ G  +   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L RLPELL RIG Y+ G+ +T+LAV+L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  TIEKVRFSGRGAKMHTPHIVPLSRQAIAILKQINEISGHLELVFPGDHNPYKPMSENTIN  325
             +  V+FS RG+KM+TPH+VPLS+Q +AIL +++  +G+  L+F G H+P KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  RALRLMGYDTKTDVCGHGFRAMACSALVESELWSRDAVERQMSHQERNSVRAAYIHRAEH  385
            +ALR+MGYDT  DVCGHGFRAMACSAL+ES LWSRDAVERQMSHQERN+VRAAYIH+AEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKDMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R+ M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

238) int in NC_003198


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  361 bits (1357),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 210/394 (54%), Positives = 301/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            ++L V  +GS+ W +RYR+ GKE+ LA+G YP+V+L+EAR KRD ARKL+  GV P   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            +A K   D   +F+ IA  WH+S  K W++ H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   V++ + K + ++A+R++Q+++ +MR AVQ G I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             L RLPELL +I +YKG+ +T+LA+ LNL VF+RSSELR ARW E+++   +WT+PA RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+FS+RG+KM+  HLVPLS Q VA+L +++  +GE+ ++F+GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  +VCGHGFR+MACSAL ES+LWS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

239) STBHUCCB_46270 in NC_016832


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  361 bits (1357),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 210/394 (54%), Positives = 301/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            ++L V  +GS+ W +RYR+ GKE+ LA+G YP+V+L+EAR KRD ARKL+  GV P   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            +A K   D   +F+ IA  WH+S  K W++ H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   V++ + K + ++A+R++Q+++ +MR AVQ G I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             L RLPELL +I +YKG+ +T+LA+ LNL VF+RSSELR ARW E+++   +WT+PA RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+FS+RG+KM+  HLVPLS Q VA+L +++  +GE+ ++F+GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  +VCGHGFR+MACSAL ES+LWS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

240) int in NC_004631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  361 bits (1357),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 210/394 (54%), Positives = 301/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            ++L V  +GS+ W +RYR+ GKE+ LA+G YP+V+L+EAR KRD ARKL+  GV P   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            +A K   D   +F+ IA  WH+S  K W++ H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   V++ + K + ++A+R++Q+++ +MR AVQ G I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             L RLPELL +I +YKG+ +T+LA+ LNL VF+RSSELR ARW E+++   +WT+PA RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+FS+RG+KM+  HLVPLS Q VA+L +++  +GE+ ++F+GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  +VCGHGFR+MACSAL ES+LWS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

241) SeAg_B4773 in NC_011149


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  361 bits (1357),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 207/394 (53%), Positives = 306/394 (78%), Gaps = 2/394 (0%)

Query  26   LYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVYPTITlaearakrdaakkllSQGIDPKV  85
            ++L V P+GS+YWR++YR  +  KE  LA+GVYP ++L+EAR+KRD A+KL+S+G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKGAQAEIEGAYLFETIARQWHASNLTWSEDHSHRVLLTLEQYIFPSIGQIDARTLRTS  145
            ++++ +   +    FE IAR+WHASN  W++ HS++VL +LE  +FP IG+ D  TL T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  QLLNPIKAVDTAGKHDVAQRLMQRVNAIMRFGVQNDLLESNPASDMAGALLSVKATHHPA  205
            +LL P++A ++    ++A RL QR++A+MR++VQ++++  NPA DMAGAL +VK  H+PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPPKRIPEFLERLSRYKGRLMTRLAVELTLLTFIRSSEMRFARWSEVNFERSEWTIPGIR  265
            L   R+PE+L R++ YKG+ +T+LAV L LL FIRSSE+R+ARWSE++++ + WTIP+ R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  KPIPGVKHSERGMKMKTEHIVPLSKQAFDIFKRLHALSGKGEVIFPSDHDPKKVMSENTV  325
             P+PGVK S+RG KM+T H+VPLSKQ   I+  L++ +G   +IF + HDP+K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NSALRVMGYDTKTEVCGHGFRTMARGALSESKLWNDDAIERQLSHVERKNVKGSYMHTSE  385
            N ALRVMGYDT  +VCGHGFR+MA +AL ES LW+ DA+ERQ+SH ER+ V+++Y+H +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  YLEERRLMLQWWADYIDANKNGSITPYDFARVHG  419
             LEERRLMLQWWAD++DAN++  I+P+++A+++ 
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

242) TY21A_22260 in NC_021176


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  360 bits (1354),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 209/394 (54%), Positives = 301/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            ++L V  +GS+ W +RYR+ GKE+ LA+G YP+V+L+EAR KRD ARKL+  GV P   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            +A K   D   +F+ IA  WH+S  K W++ H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   V++ + K + ++A+R++Q+++ +MR AVQ G I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             L RLPELL +I +YKG+ +T+LA+ LNL VF+RSSELR ARW E+++   +WT+PA RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+FS+RG+KM+  HLVPLS Q VA+L +++  +GE+ ++F+GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGMRAAYVHKAEH  384
            KALRV+GYDT  +VCGHGFR+MACSAL ES+LWS+DA+ERQMSH+ERNG+RAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE +++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINNP  393

243) int in NC_012731


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  360 bits (1353),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 214/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+ G+I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIEGYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RI +Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSERGAKMRMPHIVPLSEQAIAILKQIKDITGNNELVFPGDHNPYKPMCENTVN  325
            P+ GV++S+RG+KMR PH+VPLS Q +AIL +++  +G+N L+F G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

244) PPS_0628 in NC_015733


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  359 bits (1349),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 211/392 (54%), Positives = 301/392 (77%), Gaps = 4/392 (1%)

Query  31   LYLLVKPSGVKTWRMKYTKPDGRDGLATFGNYPALGLKaarerraqalellaaGKDPIEQ  90
            ++LLV P+G + WR++Y +  G++   ++G YP ++L  AR +R +A  L++ G DP EQ
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQ  59

Query  91   ARLDKQEAANARANTFRLLAQEWHAACARKWTPGHAATVWRRIESHLLPTLGDRPVAELK  150
             R  K         +F  +A+ WHA+  ++W+ +H+  V + +E+H++P +G+R ++ L+
Sbjct  60   KRAKK--VVPDLQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  151  TRDLLVPLKAAEKRDTLDTAARLRQYMTGILRMAVQHGHLDFNPAIDLQGATATRKTAHR  210
            T DLL+P++AAE ++  + A+RL+Q +++++R AVQ G + +NPA+D+ GA +T K  HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  211  PALPFDRLPELLQRIDADSGRGLTKLAVQLTLLVFIRSSELRFARWGEIDMGRLMWEIPG  270
            PAL + RLPELL RI++  G+ +T+LAV L LLVFIRSSELR+ARW+EID++  MW IP+
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  271  ERAPIEGVKNSHRGSKMSTPHLVPLSRQSVSVLERIRDLTGRFDLVFAGDHHHWKPMSEN  330
            ER P+ GVK SHRGSKM TPHLVPLS+Q V++L  ++  +G  +L+F+G H+ +KP+SEN
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  331  TVNKALRRMGYDTKSEVCGHGFRTMACSALVESGLWSKDAVERQMSHQERNTVRAAYIHK  390
            TVNKALR MGYDT  +VCGHGFR+MACSAL+ESGLWS+DAVERQMSHQERN VRAAYIHK
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  391  AEHIQERRLMVQWWADYLDANRVEAITPYDFA  422
            AEH++ERRLM+QWWAD+LDANR   I+P+++A
Sbjct  357  AEHLEERRLMLQWWADFLDANRERFISPFEYA  388

245) Rahaq2_2006 in NC_016818


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  358 bits (1346),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 206/390 (53%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRIDRKESRLGLGAYPDVSLAYARQQRDSIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL+ AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERTPSTPEKTFKHVALEWHNSNRTWSENHATRLLASMNNHIFPIIGHLQVTELNTRHF  145
             A +  +  + +F H+A  WH SN+ W+++H+ ++L S++ H+FP+IG+ ++T LNT ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKRIEKKGLLEVAARTRQHMCNIMRHAVHQELIENNPAANLEGIIAPPVKRHYPAlp  205
            +  ++  E K + E+A+R +Q++  +MR AV+  +I  NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpelliriKDYQQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNRIWTIPATRE  265
            L RLPELL RI  Y+ G+ +T+LAV L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVLYSGRGAKMRTPHIVPLSRQSIAILKQIREISGHQVLVFPGDHNPYKPMCENTVN  325
            ++PGV +S RG+KMRTPH+VPLS+Q +AIL +++  +G++ L+F G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT +++CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMCRKAYAPPYICGK  415
            L+ R+ M+QWW+D+LD  R  + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

246) Dd1591_3717 in NC_012912


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  358 bits (1345),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 212/393 (54%), Positives = 307/393 (79%), Gaps = 2/393 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTlaearakrdeakkllVQGIDPka  85
            ++L + P GS+YWR++YR  +  KE  LA+GV P V+L+EAR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   eqkeaqaeTAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTS  145
            +++  +       +FE IAR+WHASNK+W++ H  +V++ LE  +FP IG  DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKAVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMSGALTTTKARHYPA  205
            +LL P++A +A    ++A RLQQR++A+MRYAVQ++ I  NPA DM+GALTT K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWREFDFDKAYWRVPAQR  265
            L   RL E+LSR+++Y+G+ +T++AV L LL F+RSSELR+A+W E+D+D+A W +PA+R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPGDHDPEKVMSENTV  325
            E++ GV++S RG KM+  H+VPLS+Q VA+L +L++ +G+N  +F G HDP K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRAMGYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSE  385
            N+ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAY H +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  YLDERRLMVQWWADYLDANREWYVTAYDFGKLT  418
             L+ERRLM+QWWAD+LDANRE+++++++++K+ 
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKIN  391

247) int in NC_011751


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 215/390 (56%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMSENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

248) KPHS_34600 in NC_016845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 215/390 (56%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMSENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

249) CKO_00917 in NC_009792


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  356 bits (1339),  Expect = 9e-100, Method: Compositional matrix adjust.
 Identities = 214/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

250) ST548_p7779 in NC_020181


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  356 bits (1339),  Expect = 9e-100, Method: Compositional matrix adjust.
 Identities = 214/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

251) A79E_1712 in NC_018522


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  356 bits (1339),  Expect = 9e-100, Method: Compositional matrix adjust.
 Identities = 214/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

252) YPA_1295 in NC_008150


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1333),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

253) int2 in NC_005810


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1333),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

254) int in NC_003143


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1333),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

255) int in NC_017154


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1333),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

256) int in NC_017160


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1333),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

257) y2393 in NC_004088


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1333),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

258) YPDSF_1208 in NC_009381


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1333),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

259) Entas_3110 in NC_015968


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  355 bits (1334),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 207/389 (54%), Positives = 296/389 (77%), Gaps = 4/389 (1%)

Query  29   LYLLVKKNGTKAWRMNYRFNGKQATLALGVFPDVSLALARKRRDEARQLLADGVDPRVSK  88
            ++LLV  NG++ WR+ YR+ GK+ TLALGV+P+VSL+ AR +RDEAR+L+++GVDP   K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  89   RAAPTEPS-SATFQTIALEWHKGSIGHPSWKEITRIKILREMENHIFPFIGNKPIDSLKT  147
            RA    P    +F+ IA  WH    ++  W +    K+L+ +E H+FPFIGN+ I +L+T
Sbjct  61   RAKKVVPDLQLSFEHIARRWH---ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  148  SDLLPLLVRMSDQGIGATTGRVKTTLASVFRYAIQRGIVEYNPTHDLRGAIASPKIKHrp  207
            +DLL  +     + I   ++R++  +++V RYA+Q GI+ YNP+ D+ GA+++ K +HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  208  alplerlpelISKIDSYTGRPLTKLAVLFSLHTFVRSSELRHARWEEINFETAMWTIPAQ  267
            AL L RLPEL+S+I+SY G+P+T+LAV+++L  F+RSSELR ARW EI+++ AMWTIPA+
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  268  RKRIEGVKYSERGAKMGSIHYVPLSNEAIDVLEAIKKISGEYELIFPGDSNPYKPMSENT  327
            R  + GVK+S+RG+KM + H VPLS++ + +L  ++  +GE  LIF G  +P KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  328  VNKSLRIMGYDTQADICLHGFRAMACSALTESGLWSRDAVERQMSHQERNEVRAAYVHLA  387
            VNK+LR+MGYDT  D+C HGFRAMACSAL ESGLWSRDAVERQMSHQERN VRAAY+H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  388  QHMQERRRMMQWWSHYIISNCESYIAPYE  416
            +H++ERR M+QWW++++ +N E +I+P+E
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFE  386

260) KPK_1842 in NC_011283


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  354 bits (1331),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLIKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LL+ P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGACTPEKLFKTVALAWHKSNTKWSKNTADRLLASLNNHVFPVIGHLSVSELKPRHF  145
             A +     +  F  +A  WH SN +W+++ +D++L SL+ HVFP IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgiekkglleVASRTRQHLSNIMRYAVHQGVIDSNPAANLDGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpelieriDGYHQGRELTRLAVLLTLHVFIRSSELRFARWSEIDFRNRVWTIPGTRE  265
            L RLPEL+ RI++Y +G+ +T+LAV+L L VFIRSSELR+ARWSEID+ N +WTIP+ RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIEGVRYSGRGAKMRTPHIVPLSEQAIAILKRIRDISGDGELVFPGDHNPYKPMCENTVN  325
            ++ GV++S RG+KMRTPH+VPLS Q +AIL  ++  +G+  L+F G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKKDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR+MGYDT +D+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTCREAYVPPY  411
            L+ R+ M+QWW+D+LD+ RE +++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

261) PC1_0501 in NC_012917


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  354 bits (1331),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 206/390 (53%), Positives = 309/390 (80%), Gaps = 1/390 (0%)

Query  25   LYLTVSPSGAKLWYFRYRFGGKENRLAFGPYPQITlaearekrdaarkllaSGLSPSQLR  84
            ++L V P+G++ W +RYR+ GKE+ LA+G YP+++L+EAR KRD ARKL++ G+ P + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KSNNPAVEESRTFQYVAMTWHTSSLKLWSEAHADKILTCLKRYVFPAIGSMDIAQVETRH  144
            ++++   +   +F+ +A  WH+S+ K W+++H+DK+L  L   VFP IG+ DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVVTQHHPAl  204
            L   V+A + K + ++A+R++Q+++ +MR AVQ G+I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  plkrlpellekIENYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             L RLPELL +I +YKG+ +T+LA+ LNL VF+RSSELR+ARW E+++   +W++PA+RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAYSGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+FS+RG+KM+  HLVPLS+Q VA+L ++Q+ +GE+ ++F GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  ++CGHGFR+MACSAL ESG WS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE +++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

262) Dd703_3412 in NC_012880


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  354 bits (1328),  Expect = 6e-99, Method: Compositional matrix adjust.
 Identities = 207/390 (54%), Positives = 310/390 (80%), Gaps = 1/390 (0%)

Query  25   LYLTVSPSGAKLWYFRYRFGGKENRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            ++L V P+G++ W +RYR+ GKE+ LA+G YP+ +L+EAR KRD ARKL++ G+ P + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KTNNLAADESRTFQYLAQTWHTSSLKLWSEAHADKILTCLKRYVFPAIGAMDIAQVETRH  144
            +++++ +D   +F+ +A+ WH+S+ K W+++H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVATQHHPAl  204
            L   V+A + K + ++A+R++Q+++ +MR AVQ G+I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  plkrlpellekMENYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHLWSVPAQRE  264
             L RLPELL ++ +YKG+ +T+LA+ LNL VF+RSSELR+ARW E+++   +W++PA+RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVDGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+FS+RG+KM+  HLVPLS+Q VA+L ++Q+ +GE+ ++F GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKSEVCGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  +VCGHGFR+MACSAL ESG WS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE +++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

263) ECNA114_2039 in NC_017644


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1324),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGGSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++L V P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

264) YpAngola_A2104 in NC_010159


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1326),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRGMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
            KALR MGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQE+N VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

265) Dd1591_3537 in NC_012912


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1325),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 209/390 (54%), Positives = 307/390 (79%), Gaps = 1/390 (0%)

Query  25   LYLTVSPSGAKLWYFRYRFGGKESRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            ++L V P+G++ W +RYR+ GKE  LA+G YP+ +L+EAR KRD ARKL++ G+ P + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KANNPAVDESRTFQYVAQAWHTSSLKLWSDAHADKILTCLKRYVFPTIGAMDISQVETRH  144
            +A++   D   +F+ +A+ WH+S+ K W+++H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTLVVTQHHPAl  204
            L   V+A + K + ++A+R++Q+++ +MR AVQ G+I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  plkrlpellekIESYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             L RLPELL +I SYKG+ +T+LA+ LNL VF+RSSELR+ARW E+++   +W++PA+RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQALSGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+FS+RG+KM+  HLVPLS+Q VA+L ++Q+ +GE+ ++F GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  ++CGHGFR+MACSAL ESG WS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE +++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

266) int in NC_011748


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1327),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG Y  +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

267) O3M_09700 in NC_018650


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1327),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG Y  +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

268) O3O_15890 in NC_018661


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1327),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG Y  +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

269) O3K_09735 in NC_018658


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1327),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG Y  +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

270) int in NC_015761


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1327),  Expect = 8e-99, Method: Compositional matrix adjust.
 Identities = 208/388 (54%), Positives = 291/388 (75%), Gaps = 0/388 (0%)

Query  31   LYLLIKPNGSKLWYMKYRIDGKEKKLAFGPYPDVSLLTARQLRDAARIKMREGVDPSVDK  90
            ++LL+ PNGS+ W ++YRI GKEK LA+G YP+VSL  AR  RD AR  + EGVDP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  91   KIAQQKKKNGQTFRQIAINWHADHRRWSEHYATTIRRRLEMYIFPDIGDRYIDQIVTEDL  150
            +  +       +F +IA  WHA +++W++  +  + + LE  +FP IG+R I  + T DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  151  LFTLRKVENKGFLEITARLKNYVTEIMRYAVKKQLIRSNPALDLDGEFTPPETQHYPAlp  210
            L+ +R  E K + EI++RL++ ++ +MRYAV+  +IR NPALD+ G +T    QH PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  211  leklpellSRTDNYSGRLLTRYALKLSLLFFVRSSELRFARWSEIDWQQKLWIIPEEREQ  270
            L +LPELLSR ++Y G+ +T+ A+ L+LL F+RSSELR+ARWSEID ++ +W IP ERE 
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  271  IENVRFSHRGTKMKTQHIVPLSDQAMAILKQTEALSGHLAFIFPGEYDQDKCMSDNTISK  330
            +  V+FSHRG+KM+T H+VPLS Q +AIL + ++ +G+ ++IF G  D  K +S+NT++K
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  331  ALRVMGYDTRKEICGHGFRAMACSALSESGLWSKEAIEKQMSHQERNSVRAAYIHKAEYL  390
            ALRVMGYDT +++CGHGFRAMACSAL ESGLWS++A+E+QMSHQERN+VRAAYIHKAE L
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  391  EERINMMQWWADYLDANTKRHVSPYQFA  418
            EER  M+QWWAD+LDAN  R +SP+++A
Sbjct  361  EERRLMLQWWADFLDANRERFISPFEYA  388

271) Dd703_3554 in NC_012880


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1326),  Expect = 9e-99, Method: Compositional matrix adjust.
 Identities = 213/391 (55%), Positives = 302/391 (78%), Gaps = 2/391 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTlaearakrdeakkllVQGIDPka  85
            ++L + P GS+YWR++YR  +  KE  LA+GV P V+L+EAR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   eqkeaqaeTAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTS  145
            +++  +       +FE IAR+WHASNK+W++ H  +V++ LE  +FP IG  DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKAVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMSGALTTTKARHYPA  205
            +LL P++A +A    ++A RLQQR++A+MRYAVQ++ I  NPA DM+GALTT K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWREFDFDKAYWRVPAQR  265
            L   RL E+LSR+++Y+G+ +T++AV L LL F+RSSELR+A+W E+D+D+A W +PA+R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPGDHDPEKVMSENTV  325
            E++ GV++S RG KM+  H+VPLS+Q VA+L +L++ +G+N  +F G HDP K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRAMGYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSE  385
            N+ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAY H +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  YLDERRLMVQWWADYLDANRKETTAPYDYAN  416
             L+ERRLM+QWWAD+LDANR    +P++YA+
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAK  389

272) Dda3937_01301 in NC_014500


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  353 bits (1326),  Expect = 9e-99, Method: Compositional matrix adjust.
 Identities = 208/394 (53%), Positives = 304/394 (78%), Gaps = 2/394 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTladarakrdeakkllVQGIDPka  85
            ++L + P GS+YWR++YR  +  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYRILG--KEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   eqkeaqaeTAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTS  145
            +++  +       +FE IAR+WHASNK+W++ H  +V++ LE  +FP IG  DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  HLLAPIKAVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMSGALTTTKARHYPA  205
            +LL P++A +A    ++A RLQQR++A+MRYAVQ++ I  NPA DM+GALTT K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  LPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWHEFDFDKAYWRVPAQR  265
            L   RL E+LSR+++Y+G+ +T++AV L LL F+RSSELR+A+W E+D+D+A W +PA+R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  266  EAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPGDHDPEKVMSENTV  325
            E++ GV++S RG KM+  H+VPLS+Q VA+L +L++ +G+N  +F G HDP K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  326  NNALRAMGYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSE  385
            N+ALR MGYDT  +VCGHGFR+MA +AL ESGLWS DA+ERQ+SH ERN VRAAY H +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  386  YLDERRLMVQWWADYLEVLKREYITSYDFAKMSG  419
             L+ERRLM+QWWAD+L+  +  +I+++++AK++ 
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

273) int in NC_011750


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  351 bits (1319),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGSSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++L V P +SR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

274) CE10_2255 in NC_017646


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  351 bits (1319),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGSSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++L V P +SR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

275) NRG857_09860 in NC_017634


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  351 bits (1319),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 298/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGSSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            ++L V P +SR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
             A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            P+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
            KALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

276) KPN2242_15195 in NC_017540


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  351 bits (1320),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 203/393 (52%), Positives = 300/393 (77%), Gaps = 1/393 (0%)

Query  26   LYLLIKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LL+ P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   ASERRACTPEKVFKTVALAWHKNNKKWSQNTADRLLASMNNHIFPVIGHLSVTELKPHHF  145
             + +     +  F  +A  WH +NK+W+Q+ +D++L S++ H+FP IG+  +T L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQGFIDTNPAANLDGVTAPPMRHHYPALP  205
            +  +++ E K + E+ASR +Q++S +MR AV+ G+I  NPA ++ G  +   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LERLPELIEHIEAYHQGREltrlavlltlhlFIRSSELRFARWSEIDFINRIWTIPATRE  265
            L RLPEL+ +I +Y +G+ +T+LAV+L L +FIRSSELR+ARWSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIVGVRYSGRGAKMRTAHIVPLSQQAIAILKRIKEISGAYELVFPGDHNPYRPMCENAVN  325
            ++ GV++S RG+KMRT+H+VPLS+Q +AIL  ++  +G   L+F G H+P +P+ EN+VN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGFDTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR+MG+DT QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYIDTCRVAYVPPFNTGRDKN  418
            LE R+ M+QWW+D++D+ R  +++PF+ ++ +N
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAKINN  392

277) W5S_1679 in NC_017845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  351 bits (1320),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 200/397 (51%), Positives = 289/397 (73%), Gaps = 8/397 (2%)

Query  26   MHLLIHPNGSKYWRLSYRFAQKQKLLALGVYPAISLTDARERRDEARKLIANGIDPGARK  85
            M LL+HPNGS+YWRL YR+  K+K LALGVYP +SL++AR +RDEARKLI++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KSGREQQGTHDESRSFAVMARAWAETKTKWSEDYKVKVWRRIENYLLPDLGNRDVSELDT  145
               R ++   D   SF  +AR W  ++ +W++    KV + +E  ++P +GNRD++ L+T
Sbjct  61   ---RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  SDLLIPLRKVEKLGYLDIAMRLKQYTTSIMRYAVQQKIISYNPAYDLQGTIEKGETAHRP  205
            +DLLIP+R  E     +IA RL+Q  +++MRYAVQ  II YNPA D+ G++      HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  SIEIYEIPDLLQKLDNYRGRGlltelairltllVFVRSSELRFARWSEIDFKKSLWVIPE  265
            ++++  +P+LL ++++Y+G+ +     +   L VF+RSSELR+ARWSEID+ +++W IP 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLL-VFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  QRKEVKGVKHSGRGAKMKRKHFVPLCRQAVEILKEVKQITYGEKAGDGFIFTGFYDSDSA  325
            +R  + GVK S RG+KM+  H+VPL +Q V IL E++  +    + +G+IFTG  D+  +
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRKP  292

Query  326  MSSGTINKALQRMGYDTKTDLCGHGFRTLACSALTESGLWSEDTVELQMSHKEKNTVRSA  385
            +S  T+NKAL+ MGYDT  D+CGHGFR++ACSAL ESGLWS D+VE QMSH+E+N VR+A
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  386  YTHKVSHLDQRKLMLQWWADFLDANRNGVVSPFEFAQ  422
            Y HK  HL++R+LMLQWWADFLDANR+  +SPFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

278) ETA_03770 in NC_010694


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  350 bits (1316),  Expect = 5e-98, Method: Compositional matrix adjust.
 Identities = 210/325 (65%), Positives = 277/325 (86%), Gaps = 1/325 (0%)

Query  26   MVLLAHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LL HPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAFKVEQEQEAITFEMVARDWQASNQKWSASHSARVLKSLEDNLFAAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR W+ASN++W+ SHS +VLKSLE ++F+ IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELSRIPELLHRIDHYSGRPltrlaleltllVFIRSSELCFARWSEVDFETAMWTIPGERE  265
            +LSR+PELL RI+ Y G+P+T+LA+ L LLVFIRSSEL +ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  PSEGVKHSQRGSKMRTPHLVPLSRQALGILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
            P  GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+  LIF G HDPRKP+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACS  350
            KALRVMGYDT  +VCGHGFR+MACS
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACS  324

279) Dda3937_02713 in NC_014500


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1304),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 204/390 (53%), Positives = 305/390 (79%), Gaps = 1/390 (0%)

Query  25   LYLTVSTSGAKLWYFRYRFGGKENRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            ++L V  +G++ W +RYR+ GKE+ LA+G YP+ +L+EAR KRD ARKL++ G+ P + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KTNNPAVDESHTFQSVTMAWHTSSLKLWSDAHADKILICLKRYVFPAIGAMDIAQVETRH  144
            ++++   D   +F+ ++  WH+S+ K W+++H+DK+L  L   VFP IG  DI+ ++T +
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVATQHHPAl  204
            L   V++ + K + ++A+R++Q+++ +MR AVQ G+I+YNPA D+ G +T V  QH+PAL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  plkrlpellekIESYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             L RLPELL +I SYKG+ +T+LA+ LNL VF+RSSELR+ARW E+++   +W++PA+RE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  265  AVNDVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGKSVFVFPGAHTLNKPMSENTIN  324
            ++ +V+FS+RG+KM+  HLVPLS+Q VA+L ++Q+ +G + ++F GAH   KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  325  KALRVIGYDTKSEVCGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
            KALRV+GYDT  +VCGHGFR+MACSAL ESG WS+DA+ERQMSH+ERNGVRAAY+HKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE +++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

280) ECP_1962 in NC_008253


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

281) ECABU_c22620 in NC_017631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

282) c2449 in NC_004431


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

283) i14_2259 in NC_017652


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

284) i02_2259 in NC_017651


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

285) ECOK1_2168 in NC_017628


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

286) intA_3 in NC_022370


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

287) UM146_07190 in NC_017632


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

288) UTI89_C2204 in NC_007946


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  347 bits (1302),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 297/386 (77%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            ++LLV P GSR W L+YRI GKE  +ALG YP VSLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
             A +     +  F  +A  WH+S+K+W+Q+ +D+VL  L+ HVFP IG+  +T L++ ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +++ E K + E+ASR +Q++S +MRYAV+ G+I  NPA ++ G  ++  R+H P+L 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L RLPELL RI+SY +G+ +T+LAV+L L VFIRSSELRYARW+EI++ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +++GV++S RG+KMRTPH+VPLS QV++IL  ++  +G   L+F G HDP KP+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
            KALR MGY+T QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN VR AYIHKAEH
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANRERFISPF  385

289) Rahaq2_2650 in NC_016818


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  346 bits (1298),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 202/392 (52%), Positives = 301/392 (77%), Gaps = 5/392 (1%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YRI  KE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERTPSTPEKTFKHVALEWHNSNRTWSENHASRLLASMDNHIFPVIGHLPVAELKPRHF  145
             A +  +  + +F H+A  WH SN+ W+++H+ ++L S++ H+FP IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKSIEKKGLLEVAARTRQHMYNIMRHAVHQELTEHNPAANLDGIIAPPIKRHYPAlp  205
            +  +++ E K + E+A+R +Q++  +MR AV+  +   NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellirirDYQQGREltrlavlltlhlFIRSSELRFARWSEIDFKNRIWTIPATRD  265
            L RLPELL RI  Y+ G+ +T+LAV+L L +FIRSSELR+ARWSEID+ N +WTIPA R+
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  SIPGVRYSGRGAKMRTPHIVPLSRQAITILKQI--WEISGHQELIFPGDHNPYKPMCENT  323
            ++PGV++S RG+KMRTPH+VPLS+Q ++IL ++  W  +G++ LIF G H+P KP+ ENT
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW--AGENGLIFTGAHDPRKPISENT  297

Query  324  VNKALRLMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKA  383
            VNKALR+MGYDT +++CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN+VRAAYIHKA
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  384  EYLDARKAMMQWWSDYLDMCRKAYAPPYICGK  415
            E L+ R+ M+QWW+D+LD  R  + +P+  +K
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAK  389

290) Pecwa_1727 in NC_013421


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  346 bits (1300),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 200/398 (51%), Positives = 287/398 (73%), Gaps = 9/398 (2%)

Query  26   MHLLVHPNGSKYWRLSYRFAQKQKLLALGVYPAISLTDARERRDEARKLIANGIDPGAKK  85
            M LLVHPNGS+YWRL YR+  K+K LALGVYP +SL++AR +RDEARKLI++G+DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KASIREQPGAQDESRSFAVMARAWAETKTKCSEDYKVKVWRRIENYLLPDLGKRDVSELD  145
                R +    D   SF  +AR W  ++ + ++    KV + +E  ++P +G+RD++ L+
Sbjct  61   ----RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  146  TSDLLTPLRKVEKLGYLDIAMRLKQYTTSIMRYAVQQKIISYNPAYDLAGTVEKGETAHR  205
            T+DLL P+R  E     +IA RL+Q  +++MRYAVQ  II YNPA D+AG++      HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  206  PSIEIYEIPDLLQKIDDYHGRGlltelairltllVFVRSSELRFARWNEIDFKKSLWVIP  265
            P++++  +P+LL +I+ Y G+ +     +   L VF+RSSELR+ARW+EID+ +++W IP
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLL-VFIRSSELRYARWSEIDIDNAMWTIP  235

Query  266  EQRKEVKGVKYSGRGAKMKRKHFVPLSRQAVEILKEVKQITYGEKAGDGFIFTGFYDSDS  325
             +R  + GVK+S RG+KM+  H+VPLS+Q V IL E++  +    + +G+IFTG  D+  
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA----GENGLIFTGAHDPRK  291

Query  326  AMSSGTINKALQRMGYDTKTDLCGHGFRTLACSALTESGLWSEDTVELQMSHKEKNTVRS  385
            ++S  T+NKAL+ MGYDT  D+CGHGFR++ACSAL ESGLWS D+VE QMSH+E+N VR+
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  386  AYTHKVSHLDQRKLMLQWWADFLDANRNGVVSPFEFAQ  423
            AY HK  HL++R+LMLQWWADFLDANR+  +SPFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

291) intB in NC_021505


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  344 bits (1293),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 205/392 (53%), Positives = 290/392 (74%), Gaps = 4/392 (1%)

Query  31   MYLYVAPCGSKTWRLRYFKPNGKEGTLIIGKYPIVSLAVARIKRDEAKALLLDNLDPMEE  90
            M+L V P GS+ WRLRY +  GKE TL +G YP VSL+ AR KRDEA+ L+ + +DP E+
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQ  59

Query  91   KQKAKIAAQRASLLFETVALEWHVEMSRRWTEGHAKTVLSRLRAHVFPLIGQRPIAELDT  150
            K+  K+ ++   L FE +A  WH   +++W+++H+  VL  L +HVFP+IG+R I+ L+T
Sbjct  60   KRAKKVVPD-LQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  151  HDLLEVTQRIKDRGTMDVALRVQNYLSTIMRGAKRARQITQNPALDLAGSIQAPRTVHRP  210
             DLL   +    +   ++A R+Q+ +S++MR A ++  I  NPALD+AG++ + +  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  211  ALSLNRLPELLDRIDNYTGRELTRLAVLLTLHVFVRSSELRFARWDEFDLQRAMWEIPDT  270
            AL L+RLPELL RI++Y G+ +T+LAV+L L VF+RSSELR+ARW E+D++ AMW IP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  271  RKPIEGVRYSTRGTKMSGDIQIVPLSPQVIEILERLRSLNRFSELVLPGDHRYWKPLSEN  330
            R P+ GV++S RG+KM    ++VPLS QV+ IL  L++    + L++ G H  +KP+SEN
Sbjct  238  REPLPGVKFSHRGSKMRTP-HLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  331  TVNQVLRNMGYDTTKDVCGHGFRTMACSALLESGLWTDAAIERQMSHQERNRVRAAYIHK  390
            TVN+ LR MGYDTT+DVCGHGFR+MACSAL+ESGLW+  A+ERQMSHQERN VRAAYIHK
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  391  AQFLEQRRLIMAWWSNYIDANRSGRITPHEFA  422
            A+ LE+RRL++ WW++++DANR   I+P E+A
Sbjct  357  AEHLEERRLMLQWWADFLDANRERFISPFEYA  388

292) PputW619_4935 in NC_010501


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  344 bits (1292),  Expect = 5e-96, Method: Compositional matrix adjust.
 Identities = 202/393 (52%), Positives = 289/393 (74%), Gaps = 4/393 (1%)

Query  31   LYLLVKPNGRKGWRLRYVKPDGREGLTSLGNYPVVGLADARHKRFELKQQLANGIDPIQS  90
            ++LLV PNG + WRLRY +  G+E   +LG YP V+L++AR KR E ++ +++G+DP + 
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQ  59

Query  91   KQQAKVQAVINGRTFESVALDWYAGMVPKWAPGHAKTVLSRLKTHVFPLLGARAIVELDT  150
            K+  KV + ++  +FE +A  W A+   +WA +H+  VL  L THVFP++G R I  L+T
Sbjct  60   KRAKKVVPDLQ-LSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  151  HDLMQPLEAVTKRGTIDVALRIKNYLQSIMREAKRLRLITANPAHDLDGSIKTPRVTHRP  210
             DL+ P+ A   +   ++A R+++ + ++MR A +  +I  NPA D+ G++ T +  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  211  ALPLSRLPELQARIDGYKGRPLTRLTVMLSLHVFVRSSELRFARWNEFDLKRGIWEIPDT  270
            AL LSRLPEL +RI++YKG+P+T+L+VML+L VF+RSSELR+ARW+E+D+  ++W IP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  271  RPALDGVPFSTRGTKMAGDIHVVPLSPQAVALLEQIHAITGKFELVFAGDAKPWKPMSEN  330
            R +L GV FS RG+KM    H+VPLS Q VA+L ++++ +G   L+F+G   P+KP+SEN
Sbjct  238  REPLPGVKFSHRGSKMRTP-HLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  331  TVNAALRTMGYDTKVDICGHGFRAMACSALVESGLWSETAIERQMSHKERNNVRAAYTHK  390
            TVN ALR MGYDT  D+CGHGFRAMACSAL+ESGLWS  A+ERQMSH+ERN VRAAY HK
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  391  AEFLEERRMIMTWWSRFLEANREDHVTPHEFAR  423
            AE LEERR+++ WW+ FL+ANRE  ++P E+A+
Sbjct  357  AEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

293) Rahaq2_1748 in NC_016818


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  343 bits (1288),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 199/390 (52%), Positives = 304/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRIDGKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            ++LLV+P GSR W L+YRI GKE  L+LG YP+VSL++AR +RD  RKL+++ ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   SAERATSSPEKTFKYVALDWHKSNRTWSENHASRLLASMNNHIFPVIGHLPVAELKPRHF  145
             A +  +  + +F  +A  WH SN+ W+++H+ ++L S++ H+FP IG+  ++ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDLLKGIEQKGLLEVAARTRQHMCNIMRHAIHQDLIKNNPAANLEGIIAPPVKRHYpalp  205
            +  +++ E K + E+A+R +Q++  +MR A++ ++I+ NPA ++ G ++   ++H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellarIEDYQQGREltrlavlltlhlFIRSSELRFACWSEIDFKNRIWTIPATRE  265
            L RLPELL+RI  Y+ G+ +T+LAV+L L +FIRSSELR+A WSEID+ N +WTIPA RE
Sbjct  181  LSRLPELLSRIGSYK-GQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIPGVRYSERGAKMRTPHIVPLSRQSIAILKQIREISGHRVLIFPGDHNPYKPMCENTVN  325
            ++PGV++S+RG+KMRTPH+VPLS+Q +AIL +++  +G+  LIF G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMRYDTKNEICGHGLRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+M YDT +++CGHG+RAMACSAL+ESGLW++DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMCPKQYVPPYICGK  415
            L+ R+ M+QWW+D+LD    ++++P+  +K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

294) int in NC_009648


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  343 bits (1289),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 204/349 (59%), Positives = 277/349 (80%), Gaps = 3/349 (0%)

Query  2    REEAQLLLISGIDPSAHRKAERLAITPEHTFESVAREWVTSNVNWSAEHKKRVLRYFELY  61
            R+EA+ L+  G+DP  +++A ++    + +FE +AR W +SN +W+  H  +VL+ +E  
Sbjct  43   RDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETH  102

Query  62   VFPTNGSCDITKMKVKDLLVPIKEVEKAGKLDVASRLQQRTACVMRYAVQNGIIDHNPAS  121
            VFP  G+ DIT ++  DLL+P++  E     ++ASRLQQR + VMRYAVQ+GII  NPA 
Sbjct  103  VFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPAL  162

Query  122  DLTGAVSTPKVRHHPALDLNLIPDFLERVDDFKGRkltqlavklalllFIRSSELRFARW  181
            D++GA++T K +H+PALDL+ +P++L R++ +KG+ +TQLAV L LL+FIRSSELR+ARW
Sbjct  163  DMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARW  222

Query  182  DEIDLRNAMWTIPAEREPIPGVKYSARGAKMHSPHLVPLSRQAIELLHKVRQHCRPGTE-  240
             EID+ NAMWTIPAEREP+PGVK+S RG+KM++PHLVPLS+Q + +L  +  + ++G + 
Sbjct  223  SEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL--QTWAGENG  280

Query  241  LVFPGDHNYRKPMSENTINKALRVMGYDTQKDVCGHGFRTMACSALVESGLWSSDAVERQ  300
            L+F G H+ RKP+SENT+NKALRVMGYDT +DVCGHGFR+MACSAL+ESGLWS DAVERQ
Sbjct  281  LIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQ  340

Query  301  MSHQERKRVRAAYIHKAQHLEERREMMQWWADYLDANRFRHVVPYGFKK  349
            MSHQER+ VRAAYIHKA+HLEERR M+QWWAD+LDANR R + P+ + K
Sbjct  341  MSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

295) intB in NC_021505


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  342 bits (1284),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 203/393 (52%), Positives = 286/393 (73%), Gaps = 4/393 (1%)

Query  31   LYLLVQPNGRKGWRLRYVKPDGREGLTALGSYPVVGLGDARRKRFEIKQQLANGIDPIQY  90
            ++LLV+PNG + WRLRY +  G+E   ALG YP V+L++AR KR E ++ +++G+DP + 
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQ  59

Query  91   KQQTKTQAVINGRTFESVALDWYASMVPKWAPGHAKTVLSRLKTHVFPLIGARAIVELDT  150
            K+  K  + ++  +FE +A  W AS   +WA +H+  VL  L THVFP+IG R I  L+T
Sbjct  60   KRAKKVVPDLQ-LSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  151  HDLMQPLEAVTKRGTIDVALRIKNYLQSIMREAKRLRLITANPAHDLDGSIKTPRVTHRP  210
             DL+ P+ A   +   ++A R+++ + ++MR A +  +I  NPA D+ G++ T +  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  211  ALPLSRLPGLLACIEDYRGRPLTRLTVMLSLHVFVRSSELRFARWNEFDLKRGIWEIPDT  270
            AL LSRLP LL+ I  Y+G+P+T+L+VML+L VF+RSSELR+ARW+E+D+  ++W IP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  271  RPALDGVPFSTRGTKMAGDIHVVPLSPQAVALLEQIHAITGKFELVFAGDAKPWKPMSEN  330
            R +L GV FS RG+KM    H+VPLS Q VA+L ++++ +G   L+F+G   P+KP+SEN
Sbjct  238  REPLPGVKFSHRGSKMRTP-HLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  331  TVNAALRTMGYDTKVDICGHGFRAMACSALVESGLWSETAIERQMSHKERNNVRAAYTHK  390
            TVN ALR MGYDT  D+CGHGFRAMACSAL+ESGLWS  A+ERQMSH+ERN VRAAY HK
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  391  AEFLEERRMIMTWWSRFLEANREDHVTPHEFAK  423
            AE LEERR+++ WW+ FL+ANRE  ++P E+AK
Sbjct  357  AEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

296) L483_01150 in NC_021491


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  341 bits (1280),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 199/393 (51%), Positives = 289/393 (74%), Gaps = 4/393 (1%)

Query  31   LYLLVKPNGRKGWRVRYLKPDGREGLTSLGNYPVVGLADARQKRFELKQQLANGIDPIQS  90
            ++LLV PNG + WR+RY +  G+E   +LG YP V+L++AR KR E ++ +++G+DP + 
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQ  59

Query  91   KQQAKVQAVINGRTFESVALDWYAGMVPKWAPGHAKTVLSRLKTHVFPLLGARAIVELDT  150
            K+  KV + ++  +FE +A  W A+   +WA +H+  VL  L THVFP++G R I  L+T
Sbjct  60   KRAKKVVPDLQ-LSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  151  HDLMQPLEAVTKRGTIDVALRIKNYLQSIMREAKRLRLITTNPAHDLDGSIRAPRVTHRP  210
             DL+ P+ A   +   ++A R+++ + ++MR A +  +I  NPA D+ G++ + +  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  211  ALPLSRLPELQARIDVYKGRPLTRLTVMLSLHVFVRSSELRFARWNEFDLNRGIWEIPDT  270
            AL LSRLPEL +RI+ YKG+P+T+L+VML+L VF+RSSELR+ARW+E+D++ ++W IP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  271  RPALDGVPFSTRGTKMAGDIHVVPLSPQAVGLLEQIHAITGKFDLVFAGDAKPWKPMSEN  330
            R +L GV FS RG+KM    H+VPLS Q V++L ++++ +G  +L+F+G   P+KP+SEN
Sbjct  238  REPLPGVKFSHRGSKMRTP-HLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  331  TVNAALRTMGYDTKVDICGHGFRAMACSALVESGLWLETAIERQMSHKERNNVRAAYTHK  390
            TVN ALR MGYDT  D+CGHGFRAMACSAL+ESGLW   A+ERQMSH+ERN VRAAY HK
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  391  AEFLEERRMIMTWWSRFLEANREDHVTPHEFAK  423
            AE LEERR+++ WW+ FL+ANRE  ++P E+AK
Sbjct  357  AEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

297) Pfl01_3064 in NC_007492


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  340 bits (1276),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 197/393 (51%), Positives = 291/393 (75%), Gaps = 4/393 (1%)

Query  31   LYLLIQPNGRKGWRLRYVKPDGREGLTSLGSYPVIGLAEARQKRLDAKRMLADGIDPVES  90
            ++LL++PNG + WRLRY +  G+E   +LG YP ++L+EAR KR +A++++++G+DP E 
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQ  59

Query  91   KRKAKTEDAVNGRTFESVALDWHKNMSARWTLDHSKNVFNRLNNYVFPFIGARAIADLDT  150
            KR  K    ++  +FE +A  WH + + +W+  HS +V++ L+  VFPFIG R I+ L+T
Sbjct  60   KRAKKVVPDLQ-LSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  151  YDLMQPLEAIRKRGTIDVALRVQRYLQSIMREAKRLRLIPMNPAYDLQGLIKAPRVSHRP  210
             DL+ P+ A   +   ++A R+Q+ + ++MR A +  +I  NPA D+ G + + +  HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  211  TLPLSRLPELLARIYAYKGRELTRLTLMLSLHVFVRSSELRFARWCEFDLKRCVWEIPDT  270
            +L LSRLPELL+RI +YKG+ +T+L++ML+L VF+RSSELR+ARW E+D+   +W IP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  271  RPELEDVRHSTRGTKMAGDVHLVPLSPQVVAVLEQIHTLTGAFDLVFAGDARAWKPMSEN  330
            R  L +V+ S RG+KM    HLVPLS QVVA+L +++T +G  +L+F+G   ++KP+SEN
Sbjct  238  REPLPGVKFSHRGSKMRTP-HLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  331  TVNKALRTMGYDTKTEICGHGFRSMACSALIESGLWSETAIERQMSHRERNSVRAAYIHK  390
            TVNKALR MGYDT  ++CGHGFR+MACSALIESGLWS  A+ERQMSH+ERN+VRAAYIHK
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  391  AEFIEERRLIMNWWSRYLAANLQEHVTPHEFAN  423
            AE +EERRL+++WW+ +L AN +  ++P E+A+
Sbjct  357  AEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

298) KPK_1799 in NC_011283


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  337 bits (1265),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 296/390 (76%), Gaps = 1/390 (0%)

Query  26   LYLLIKPGGSRHWYLKYRINGKESRIALGAYPAISLSDARHQREGIRKMLALNINPAQQR  85
            ++LL+ P GSR W L+YRI GKE  +ALG YP +SLS+AR +R+  RK+++  ++P +Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   AVERGAYTPEKVFKIVALAWHKSNKKWSQNTADRLLASLNNHVFPVIGHLSISELKPRHF  145
               +     +  F  +A  WH SNK+W+Q+ +D++L SL+ HVFP IG+  I+ L+  ++
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQGLIDSNPAANLDGVTAPPVRRHYPAlp  205
            +  +++ E K + E+ASR +Q++S +MR AV+ G+I  NPA ++ G  +   R+H PAL 
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  lerlpellkrIEAYHQGREltrlavlltlhlFIRSSELRFARWSEIDFRNRTWTIPATRE  265
            L RLPELL RI +Y +G+ +T+LAV+L L +FIRSSELR+ARWSEID+ N  WTIPA RE
Sbjct  181  LSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  AIAGVRYSGRGAKMRTAHIVPLSEQAIAILKRIKDISGDGELVFPGDHNPYKPMCENTVN  325
            +++GV++S RG+KMRT+H+VPLS Q +AIL  ++  +G+  L+F G H+P KP+ ENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  326  KALRLMGYDTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAEY  385
            KALR+MGYDT QD+CGHGFRAMACSAL+ESGLWS+DAVERQMSHQERN+VRAAYIHKAE 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLAMNRKVFISPYLFEK  415
            L+ R+ M+QWW+D+L  NR  FISP+ + K
Sbjct  360  LEERRLMLQWWADFLDANRERFISPFEYAK  389

299) KPN2242_20085 in NC_017540


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  336 bits (1260),  Expect = 8e-94, Method: Compositional matrix adjust.
 Identities = 187/286 (66%), Positives = 243/286 (85%), Gaps = 0/286 (0%)

Query  2    AGNIRWTEAHAAKALRSLELHVFPLIGKIPVADLKTADLLIPLRVAERKGNLETAARLQQ  61
            A+N +W+++H+ K L+SLE HVFP+IG+  ++ L+T+DLLIP+R AE K   E A+RLQQ
Sbjct  82   ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQ  141

Query  62   RITAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLECFESYSGRLLTR  121
            RI+A+MRYAVQ ++I  NPA D++GA++   ++H PAL L ++PELL  + SY G+ +T+
Sbjct  142  RISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQ  201

Query  122  LAVQLNLLIFIHSSELRFARWTEIDLDGAMWTIPAEREPIPGVRYSERGAKMKTPHLVPL  181
            LAV LNLL+FI+SSELR+ARW+EID+D AMWTIPAEREP+PGV++S+RG+KM+TPHLVPL
Sbjct  202  LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPL  261

Query  182  SKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTM  241
            SKQ V++L +L+  +G++ L+F G HDPRKP+SENT+NKALRVMGYDT  DVCGHGFR+M
Sbjct  262  SKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAM  321

Query  242  ACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMM  287
            ACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL+ER  M+
Sbjct  322  ACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLML  367

300) int in NC_009648


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  334 bits (1253),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 186/286 (66%), Positives = 243/286 (85%), Gaps = 0/286 (0%)

Query  2    AGNIRWTEAHAAKALRSLELHVFPLIGKIPVADLKTADLLIPLRVAERKGNLETAARLQQ  61
            A+N +W+++H+ K L+SLE HVFP+IG+  ++ L+T+DLLIP+R AE K   E A+RLQQ
Sbjct  82   ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQ  141

Query  62   RITAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLECFESYSGRLLTR  121
            RI+A+MRYAVQ ++I  NPA D++GA++   ++H PAL L ++PELL  + SY G+ +T+
Sbjct  142  RISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQ  201

Query  122  LAVQLNLLIFIHSSELRFARWTEIDLDGAMWTIPAEREPIPGVRYSERGAKVKTPHLVPL  181
            LAV LNLL+FI+SSELR+ARW+EID+D AMWTIPAEREP+PGV++S+RG+K++TPHLVPL
Sbjct  202  LAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPL  261

Query  182  SKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTM  241
            SKQ V++L +L+  +G++ L+F G HDPRKP+SENT+NKALRVMGYDT  DVCGHGFR+M
Sbjct  262  SKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAM  321

Query  242  ACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMM  287
            ACSALIESG WS+DAVERQMSHQERN VRAAYIHKAEHL+ER  M+
Sbjct  322  ACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLML  367

301) Q7S_09690 in NC_017047


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  334 bits (1253),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 188/363 (52%), Positives = 279/363 (77%), Gaps = 1/363 (0%)

Query  1    MGAYPDVSLADARQQRDGIRKLLAQNINPAQLRSAEKATVLPGETFKAVALSWHKSNRSW  60
            +G YP+VSL++AR +RD  RKL+++ ++P + + A K       +F  +A  WH SN+ W
Sbjct  28   LGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQW  87

Query  61   SDNHAARLLASMNNHIFPIIGHLPATELKTRHFIDLLKGIEQKGLLEVAARTRQHMCNIM  120
            +++H+ ++L S++ H+FP+IG+   T L+T +++  +++ E K + E+A+R +Q++  +M
Sbjct  88   AQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVM  147

Query  121  RHAVHQELIEHNPAANLDGIIAPPVKRHYPAlpleqlpellTRIKDYKQGRELTRLAVSL  180
            R AV+  +I  NPA ++ G ++   ++H PAL L +LPELL+RI  YK G+ +T+LAV L
Sbjct  148  RYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYK-GQPVTQLAVML  206

Query  181  TLHLFIRSSELRFARWSEIDFKNRIWTIPATRESIPGVRYSGRGAKMRTPHIVPLSGQSI  240
             L +FIRSSELR+ARWSEID+ N +WTIPA RE++PGV++S RG+KMRTPH+VPLS Q +
Sbjct  207  NLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVV  266

Query  241  AILKQIREISGHQVLVFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSAL  300
            AIL +++  +G++ L+F G H+P KP+ ENTVNKALR+MGYDT +++CGHGFRAMACSAL
Sbjct  267  AILAELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSAL  326

Query  301  MESGLWAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLDMCRKAYVPPYI  360
            +ESGLW++DAVERQMSHQERN+VRAAYIHKAE L+ R+ M+QWW+D+LD  R  +++P+ 
Sbjct  327  IESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFE  386

Query  361  CGK  363
             +K
Sbjct  387  YAK  389

302) PCC21_004050 in NC_018525


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  324 bits (1214),  Expect = 6e-90, Method: Compositional matrix adjust.
 Identities = 204/394 (52%), Positives = 296/394 (76%), Gaps = 6/394 (1%)

Query  26   LYLEITTRGSKYWRMKYRRPIDKKEDRLAFGVWPTVTladarakrdeakkllVQGIDPKA  85
            ++L +   GS+YWR++YR  I  KE  LA+GV P V+L++AR+KRDEA+KL+ +G+DP  
Sbjct  1    MFLLVHPNGSRYWRLRYR--ILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   EQKEVQAESEGAYTFETVARQ----QQALGDYHRSRVIRYLEMYISPEIGASDIRKLKTS  141
            +++  +  ++   +FE +AR+    ++  ++ H  +V++ LE  + P IG  DI  L+T+
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  142  HLLAPIKAVDASGKHDVAQRLQQRITAIMRYAVQNDYIESNPAGDMAGALTTTKARHYPA  201
            +LL P++A +A    ++A RLQQRI+A+MRYAVQ++ I  NPA DMAGALTT K +H PA
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  202  LPSVRFPEFLSRLAAYRGRLLTRCAVELMLLTFVRSSELRFAQWREFDFDSAEWRIPAQR  261
            L   R+PE+LSR+++Y+G+ +T+ AV L LL F+RSSELR+A+W E+D+D+A W IPA+R
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  262  EEIEGVRYSYRGMKMKEEHVVPLSNQALAVLAKLHALSGDNPRLFPSDHNPEKVMSENTV  321
            E + GV++S RG KM+  H+VPLS+Q +A+LA L++ +G+N  +F + H+P K +SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  322  NSALRTMGYDTKTEVCGHGFRTIARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  381
            N ALR MGYDT  +VCGHGFR++A +AL ESGLWS DA+ERQ+SH ERN VRAAYIH +E
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  382  YLDERRLMVQWWADYLDIIQYEHITPYEYARVRN  415
             L+ERRLM+QWWAD+LD  +   I+P+EYA++ N
Sbjct  359  HLEERRLMLQWWADFLDANRERFISPFEYAKINN  392

303) SBOV45841 in NC_022241


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  319 bits (1195),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 188/335 (57%), Positives = 263/335 (79%), Gaps = 3/335 (0%)

Query  26   LYLLVNPNGSKRWYIKYRFVNKEKKLALGPYPLLTLAQARRMREEAQLLLISGIDPSAHR  85
            ++LLV+PNGS+ W ++YR++ KEK LALG YP ++L++AR  R+EA+ L+  G+DP  ++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAERLAITPEHTFESVAREWVISNVNWSAEHKKRVLRYFELYVFPTNGSCDITKMKVKDL  145
            +A ++    + +FE +AR W  SN +W+  H  +VL+ +E  VFP  G+ DIT ++  DL
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  146  LVPIKEVEKAGKLDVASRLQQRTACVMRYAVQNGIIDHNPASDLTGAVSTPKVRHHPALD  205
            L+P++  E     ++ASRLQQR + VMRYAVQ+GII  NPA D++GA++T K +H+PALD
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180

Query  206  LNLIPDFLDRIDDYKGRqltqlavklalllFIRSSELRFARWDEIDLRNAMWTIPAEREP  265
            L+ +P++L RI+ YKG+ +TQLAV L LL+FIRSSELR+ARW EID+ NAMWTIPAEREP
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  IPGVKYSARGAKMHSPHLVPLSRQAIELLHEVRQHCRPGTE-LVFPGDHNYRKPMSENTI  324
            +PGVK+S RG+KM++PHLVPLS+Q + +L E+  + ++G + L+F G H+ RKP+SENT+
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL--QTWAGENGLIFTGAHDPRKPISENTV  298

Query  325  NKALRVMGYDTQKDVCGHGFRTMACSALVESGLWS  359
            NKALRVMGYDT +DVCGHGFR+MACSAL+ESGLWS
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWS  333

304) PSF113_0326 in NC_016830


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  311 bits (1165),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 180/344 (53%), Positives = 255/344 (75%), Gaps = 3/344 (0%)

Query  1    MLADGVDPIETKHQAKAEAVIKGRTFESVALDWHTEMSAKWAPGHSKTVMSRLKTHVFPL  60
            ++++GVDP E K+  K  + ++  +FE +A  WH+  + +WA +HS  V+  L THVFP+
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQ-LSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPF  106

Query  61   IGASAIVDLDTHDLMQPLEAIKKRGTIDVALRVQNYLQSIMREAKRLRLITANPAYDLEG  120
            IG   I  L+T DL+ P+ A   +   ++A R+Q+ + ++MR A +  +I  NPA D+ G
Sbjct  107  IGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAG  166

Query  121  LIKAPRVVHRPALPLSRLPELQERIDTYKGRALTRLTVMLSLHVFVRSSELRFARWSEFD  180
             + + +  HRPAL LSRLPEL  RI++YKG+++T+L+VML+L VF+RSSELR+ARWSE+D
Sbjct  167  ALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEID  226

Query  181  LKRGTWEIPDTRPALEGVPFSTRGTKMAGDIHLVPLSPQAVALLEQIHALTGKFDLVFAG  240
            +  + W IP  R +L GV FS RG+KM    HLVPLS Q VA+L ++++ +G  +L+F+G
Sbjct  227  IDNAMWTIPAEREPLPGVKFSHRGSKMRTP-HLVPLSKQVVAILAELQTWAGENGLIFTG  285

Query  241  DAKPWKPMSENTVNNALRTMGYDTKTDICGHGFRSMACSALIESGLWSETAIERQMSHKE  300
               P+KP+SENTVN+ALR MGYDT  D+CGHGFR+MACSALIESGLWS  A+ERQMSH+E
Sbjct  286  AHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQE  345

Query  301  RNNVRAAYIHKAEFIEERRLIMNWWSRYLEANREEHVTPHEFAN  344
            RN VRAAYIHKAE +EERRL+++WW+ +L+ANRE  ++P E+A+
Sbjct  346  RNGVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

305) EC042_2207 in NC_017626


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  307 bits (1150),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 185/342 (55%), Positives = 261/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++   ++ E K + E+ASR +Q++S ++R AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV +S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

306) ETEC_2075 in NC_017633


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  307 bits (1149),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 184/342 (54%), Positives = 261/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++   ++ E K + E+ASR +Q++S ++R AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV +S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDTVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++D+VERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

307) ECSF_1824 in NC_013654


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  304 bits (1139),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 181/311 (59%), Positives = 248/311 (80%), Gaps = 1/311 (0%)

Query  5    WHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKDLLEVASRT  64
            WH SN++W+Q+ +D++L SL+ H+FP IGN  ++ L+  +++  +++ E K++ E+ASR 
Sbjct  80   WHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRL  139

Query  65   RQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIGAYHQGRE  124
            +Q++S +MR AV+  +I  NPA +++G  T   R+H PAL L RLPELL RIG+Y +G+ 
Sbjct  140  QQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSY-KGQP  198

Query  125  LTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHI  184
            +T+ AV+L L VFIRSSELR+ARWSEID+ N +WTIPA REP+ GV++S RG+KMR PH+
Sbjct  199  VTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHL  258

Query  185  VPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGF  244
            VPLS Q +AIL +++  +G+N LIF G H+P KP+ ENTVNKALRVMGYDT +D+CGHGF
Sbjct  259  VPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGF  318

Query  245  RAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKTMMQWWSDYLEACR  304
            RAMACSAL+ESGLW++DAVERQMSHQERN VR AYIHKAEHLE R+ M+QWW+D+L+A R
Sbjct  319  RAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANR  378

Query  305  ESYAPPYTIGK  315
            E + +P+  +K
Sbjct  379  ERFISPFEYAK  389

308) UMNK88_5213 in NC_017641


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  303 bits (1135),  Expect = 6e-84, Method: Compositional matrix adjust.
 Identities = 175/279 (63%), Positives = 238/279 (86%), Gaps = 1/279 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGS+YWRLRYR+ GKEK LALG YPEVSL++AR++RDEARKL+++GVDP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            +A KV  + + ++FE +AR WHASN++W+ SHS +VLKSLE ++F  IG+R+I+ L+T D
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL+P++A E+    E+A+RLQQR +A+MR+AVQSG+I YNPA ++AGA++T KRQHR+AL
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELHFARWSEVDFETAMWTIPGERE  265
            +L+R+PELL RI+ Y G+P+T+LAV L LLVFIRSSEL++ARWSE+D++ AMWTIP+ERE
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGN  304
             L GVK S+RGSKMRTPHLVPLS+Q ++IL  +++ +G+
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGE  278

309) ECABU_c22350 in NC_017631


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  302 bits (1130),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 186/342 (55%), Positives = 263/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

310) LF82_294 in NC_011993


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  302 bits (1130),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 186/342 (55%), Positives = 263/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

311) BJAB0715_03144 in NC_021733


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  299 bits (1122),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 173/393 (45%), Positives = 280/393 (72%), Gaps = 5/393 (1%)

Query  46   LILFIRKSGSKVWRFKYKRANGKDGLMTLGNFPALSLKAARDKRRELETLLANGIDPIEY  105
            ++L+++ +GS+ WR++Y R  GK+  ++LG +P +SL  AR KR E   L+++G+DP E 
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQ  59

Query  106  SEIQKAKLDNKYNFESIAREWHTAYKNTGRWGTETAERALKNMEEYVFPKLGKKPIDAIK  165
               +K   D + +FE IAR WH++ K+   W+   +++ LK++E  VFP +G++ I +++
Sbjct  60   KRAKKVVPDLQLSFEHIARRWHASNKQ---WAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  166  PKELIQVIKSIEDLGYTEVVKKTRQRLTSIFAFAMSKGFIESNPAYGLQDIFILSKKTKH  225
              +L+  +++ E     E+  + +QR++++  +A+  G+I  NPA ++ + +   K+ +H
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR-QH  175

Query  226  HpqlplerlpelqAKLASDTGHPLTRLCVEFALHTFARSSEIRFARWKEFDFENAIWTIP  285
            +P L L RLPEL ++++S  G+P+T+L V + L  F RSSE+R+ARW E+D++NA+WTIP
Sbjct  176  RPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  286  PTRDFVEGYKYSHRGAKMKAPHLIPLSNQALAIIKEIFKYSGHTQNVFPKNGDPHGFMSE  345
            + R+ + G K+SHRG+KM++PHL+PLS+Q +AI+ E+   +G+   +F    DP+  +SE
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISE  295

Query  346  STINKTLRRLGYDTNIEVCGHGFRGMACAALIQSKLFQKDAVEKQMSHQERNNVRLAYTH  405
            +T+NK+LR +GYDT  +VCGHGFR+MAC+ALI+S L  +DAVE+QMSHQERN VR AY H
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  406  KAEFLEERKTMLNWWSSYLDATKETSISPYDYT  438
            KAE LEER+ ML+WW+ +LDA +E  ISP++Y+
Sbjct  356  KAEHLEERRLMLQWWADFLDANRERFISPFEYA  388

312) ECP_1936 in NC_008253


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  299 bits (1122),  Expect = 9e-83, Method: Compositional matrix adjust.
 Identities = 184/342 (54%), Positives = 261/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++  SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PA  L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

313) c2418 in NC_004431


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  299 bits (1122),  Expect = 9e-83, Method: Compositional matrix adjust.
 Identities = 184/342 (54%), Positives = 261/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++  SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PA  L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

314) i14_2235 in NC_017652


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  299 bits (1122),  Expect = 9e-83, Method: Compositional matrix adjust.
 Identities = 184/342 (54%), Positives = 261/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++  SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PA  L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

315) i02_2235 in NC_017651


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  299 bits (1122),  Expect = 9e-83, Method: Compositional matrix adjust.
 Identities = 184/342 (54%), Positives = 261/342 (77%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++  SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++  +++ E K + E+ASR +Q++S +MR AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PA  L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV++S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
             VR AYIHKAEHLE R+ M+QWW+D+L+A RE + +P+  +K
Sbjct  348  GVRAAYIHKAEHLEERRLMLQWWADFLDANRERFISPFEYAK  389

316) APECO1_1051 in NC_008563


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  281 bits (1052),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 175/320 (55%), Positives = 244/320 (77%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++   ++ E K + E+ASR +Q++S ++R AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV +S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
             VR AYIHKAEHLE R+ M+
Sbjct  348  GVRAAYIHKAEHLEERRLML  367

317) intA_2 in NC_022370


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  281 bits (1052),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 175/320 (55%), Positives = 244/320 (77%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++   ++ E K + E+ASR +Q++S ++R AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV +S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
             VR AYIHKAEHLE R+ M+
Sbjct  348  GVRAAYIHKAEHLEERRLML  367

318) UM146_07320 in NC_017632


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  281 bits (1052),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 175/320 (55%), Positives = 244/320 (77%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++   ++ E K + E+ASR +Q++S ++R AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV +S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
             VR AYIHKAEHLE R+ M+
Sbjct  348  GVRAAYIHKAEHLEERRLML  367

319) UTI89_C2177 in NC_007946


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  281 bits (1052),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 175/320 (55%), Positives = 244/320 (77%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +++  ++P +Q+ A +     +  F ++A  WH SN++W+Q+ +D++L SL+ H+FP IG
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            N  ++ L+  +++   ++ E K + E+ASR +Q++S ++R AV+  +I  NPA +++G  
Sbjct  109  NRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            T   R+H PAL L RLPELL RIG+Y +G+ +T+ AV+L L VFIRSSELR+ARWSEID+
Sbjct  169  TTVKRQHRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDI  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
             N +WTIPA REP+ GV +S RG+KMR PH+VPLS Q +AIL +++  +G+N LIF G H
Sbjct  228  DNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            +P KP+ ENTVNKALRVMGYDT +D+CGHGFRAMACSAL+ESGLW++DAVERQMSHQERN
Sbjct  288  DPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
             VR AYIHKAEHLE R+ M+
Sbjct  348  GVRAAYIHKAEHLEERRLML  367

320) Q7A_2891 in NC_017857


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  270 bits (1011),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 159/378 (43%), Positives = 255/378 (68%), Gaps = 17/378 (4%)

Query  25   LYIEVSTTGGKWWRFKFRFDGKQKRLSVGTYPDVGLKQAREQRDELRKQIANGVDPSDIR  84
            +++ V   G++ WR+++R+ GK+K L++G YP+V+L +AR +RDE RK I++GVDP + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KAEKQLNAGQLSFEFVAREWHQKFRHRWSEKYALNTISRLEREVFPFIGSKNINDIKAPE  144
            +A K +   QLSFE +AR WH   ++ W++  + + +  LE +VFPFIG+++I  +++P+
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  LLAVLRRMESRGILETAHRVHQKCGQIFRYAVATGRAERDPSTDLKGALPPVKVKHHASI  204
            LL  +R  E++ I E A R++Q+ + + RYAV +G    +P+ D+ GAL  VK ++H + 
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVK-RQHRPA  178

Query  205  IEPKQIGGLLRAINGYSGSFVTLCALRLAPLVFVRPGELRHAEWTEFDLEKAEWRIPAEK  264
            ++  ++  LL  I +Y G  VT  A+ L  LVF+R++ELR A W+E+D+++A W IPAE+
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  265  ------------MKMASVHIVPLSKQAIAVIETLKPLTGSGKYLFPSIRTITRPMSENTV  312
                         KM + H+VPLSKQ +A++  L+  +G    +F + +   +P+SENTV
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  313  NGALRRLGY-TGDEMVGHGFRSMASTILNEQG-WNRDAIERQLAHSERDGVRAAYNY-AE  369
            N ALR +GY T +++ GHGFR+MA + L E G W+RDA+ERQ++H ER+GVRAAY   AE
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  370  YLSERKRMMQSWANYLDG  387
             L ER+ M+Q WA++LD+
Sbjct  359  HLEERRLMLQWWADFLDA  376

321) GEM_3075 in NC_018513


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  270 bits (1010),  Expect = 8e-74, Method: Compositional matrix adjust.
 Identities = 171/382 (45%), Positives = 268/382 (71%), Gaps = 26/382 (6%)

Query  26   MYLHVTPNGGKYWRLAFRLHGKQKIYALGVYPQVSLAEARQMRDEAKKLIKQGIDPVIER  85
            M+L V PNG++YWRL +R+ GK+K  ALGVYP+VSL+EAR  RDEA+KLI +G+DP  ++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KQTVRRRSEEQATTFELIAREWHKTKRSAWTESHAKKIMNSLEADIFPRLGDRPIGSISA  145
            +   ++   +   +FE IAR WH +++  W++SH+ K+++SLE+++FP +G+R I ++++
Sbjct  61   R--AKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PDLLMALRVIEKRGALEIAGRVLQRCNAVFRYAVATGRIVANPAAELRGALKTPERKHHA  205
            PDLL+++R  E +   EIA+R+ QR +AV RYAV +G I  NPA ++ GAL T  R+H++
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALAHDELPEFLAKLAGYDGDPQTRLGLQLMVHTFVRTGELRAASWAEFNLELSEWRIPAE  265
            AL    LPE+L+++++Y G+P T+L++ L +  F+R++ELR A W+E++++ + W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMREEHIVPLSKQAVALLRQLQAVGAGSDLVFPSGNGRRNKWISEN  313
            R             KMR  H+VPLSKQ VA+L +LQ+ ++ ++L+F ++++ R+  ISEN
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKP-ISEN  296

Query  314  TLLYALYRLGYHSR--ATGHGFRATASTILNEMGFHPDW----IERQLAHAERNKVRAAY  367
            T+  AL  +GY++     GHGFRA A + L E G+   W    +ERQ++H ERN VRAAY
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAY  353

Query  368  -NRALYLAERRQMMQVWSDYLD  388
             ++A  L ERR M+Q W+D+LD
Sbjct  354  IHKAEHLEERRLMLQWWADFLD  375

322) intB in NC_005085


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  266 bits (996),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 172/381 (46%), Positives = 254/381 (67%), Gaps = 25/381 (6%)

Query  28   LFLWVMPNGAKYWRMAYRFDGKQKTLAFGVYPTTSLKDAREKREAARKLLAAGTDPNAAK  87
            +FL V PNG++YWR+ YR+ GK+KTLA+GVYP  SL +AR KR+ ARKL++ G DP   K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  88   KEQKRERQLTVENSFEIVAREWYDKQLPRWTDDHAVRILDSLKADAFPDLGKLPVSQLTA  147
            + +K   +L +  SFE +AR W   +  +W++ H+ ++L SL ++ FP +G+  ++ L +
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  148  PVILDTIRKIEKRGAVETAQRVLQRISAVIRYAIQTGRAVHNPATDLTGAIRAKKVEHRP  207
            P +L  +R  E +   E A R+ QRISAV+RYA+Q+G    NPA D++GA+ + K +HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  208  ALPRGELREFYRRLA---AEPLYIPTRIAMHLLMLTFVRPGELRAARWEEFDEERAEWRI  264
            AL  + L E+  R++   ++P+   T++A+ L +L F+R++ELR ARW E+D + A W I
Sbjct  178  ALDLSRLPELLSRIGSYKGQPV---TQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTI  234

Query  265  PAER------------MKMREPHLVPLSRQALELLKELRPLTGKSALLFPAVTDLKKPMS  312
            PAER             KMR PHLVPLS+Q + +L EL+  +G ++L+F +  D +KP+S
Sbjct  235  PAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPIS  294

Query  313  ENTLGYAMGRMGYKGT--ATPHGFRALASTVLNEEGF-DPDIIEKQLAHAERNKVRAAY-  368
            ENT+  A+  MGY  T     HGFRA+A + L E G+   D +E+Q++H ERN VRAAY 
Sbjct  295  ENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYI  354

Query  369  HRAEYLEERRKMMQWWAEFLG  389
            H+AE LEERR M+QWWA+FL+
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

323) intB in NC_009348


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 182/394 (47%), Positives = 269/394 (69%), Gaps = 20/394 (5%)

Query  28   LFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPEVSLrearakrdearrVIAEGIDPGLVR  86
            +FLLV+ +G +YW+L+YR  GKEK LALGVYPEVSL EAR+KRDEAR++I+EG+DP   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  87   KQSKVASRLVSENSLEVLAREWHQSQFALWSPGHATRVIESLEVDVFPDLGLVPITELTA  146
            +  KV + L  + S+E +AR WH S+   W+ +H+ +V+ SLE +VFP +G   IT L +
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  147  PMILEALRKVEKRGATETAGRILQRVSAIMRYAIQTGRASYNPAQDLRGALKATKQEHRP  206
            P +L ++R  E +   E A+R+ QR+SA+MRYA+Q+G   YNPA D+ GAL + K++HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  207  ALPRSELPEFFRRLEAEPLNPATRLALHLLMLTMTRPGEVRFARWDEFDMERAEWRIPAA  266
            AL  S LPE++ R+ +   +P T+LA+ L +L   R++E+R+ARW E+D++ A W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  267  R------------MKMRTEHLVPLSRQALAVLDELHQLTGHCELLFPSERKLTNPMSENT  314
            R             KMRT HLVPLS+Q +A+L EL+  +G+  L+F + +   +P+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  315  LSYAMGRMGYKGI--ATPHGFRALASTTLNEEGF-DPDVIERQLAHAERNKVRAAY-HRA  370
            ++ A+  MGY        HGFRA+A ++L E G+   D +ERQ++H ERN VRAAY H+A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  371  EYLDDRRKLLQWLADFYDSQRGSNVLPVNFNRVG  404
            E L++RR +LQW ADF D++R   + P ++ ++ 
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAKIN  391

324) amb0488 in NC_007626


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 161/380 (43%), Positives = 257/380 (68%), Gaps = 16/380 (4%)

Query  26   MFLLVTPQDQRYWRLKYRFGGKEKLLALGVYPDVTIKTARQLRDDAKKQLANGIDPSDAR  85
            MFLLV P++ RYWRL+YR+ GKEK LALGVYP+V++  AR  RD+A+K +++G+DP + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAKKSSQLLDGPDSFENVAREWFAKNVATWAETHSSKVLQRLESDVFPLIGTKPIGSITA  145
            +AKK    L+   SFE++AR W A N   WA++HS KVL+ LE++VFP+IG + I ++ +
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PMILAVARKIEARGANDTAHRAVQNAGQIMRYAVATGRAERDPTGDLRGALPPVRHKHFA  205
            P +L   R  EA+   + A R  Q  + +MRYAV +G    +P+ D+ GAL  V+++H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALTDPKLVGELLRAFDAFEGTVVVKAALQLAPLVFVRPGELRKAKWADIDLDAGSWAFHA  265
            AL  ++L  ELL  ++++ G  V + A+ L  LVF+R++ELR A+W++ID+D + W++ A
Sbjct  178  ALDLSRL-PELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  SK--------ARKGETI--EHLVPLSTQAVEILRDLHQYTGNRECLFPG-RDPRKPMSEA  314
             +        +++G  +   HLVPLS Q V IL +L+  +G+   +F G +DPRKP+SE 
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  315  AVNAALRRLGYDTKTEITGHGFRAMARTILAEQLGEDPHVIEQQLAHRVPDALGRAY-NR  373
            +VN ALR +GYDT  ++ GHGFRAMA + L E      + +E+Q++H+  +++  AY ++
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  374  TKYIEQRRAMMQRWSDYLDT  393
            +  +E+RR M+Q+W+D+LD+
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

325) AHML_14825 in NC_021290


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  263 bits (984),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 177/392 (46%), Positives = 271/392 (70%), Gaps = 20/392 (5%)

Query  26   LFLLITSSG-KYWRLKFRFGGKEKVLALGVYPEVSlkearvkreearrllaDGIDPSLAR  84
            +FLL+ ++G +YWRL++R+ GKEK LALGVYPEVSL EAR KR+EAR+L+++G+DP   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   KQSKVASRLASENSFEVIAREWHQGQLARWSPGHAQRVIESLEADAFPELGLVPVAELTA  144
            +  KV + L  + SFE IAR WH ++  +W+ +H+++V+ SLE++ FP +G   ++ L +
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  145  PIMLDALRKIEARGATETAGRVLQRISSVMRYAIQTGRVSYNPAQDLKGALRATKQEHRP  204
            P +L ++R  EA+   E A+R+ QRIS+VMRYA+Q+G + YNPA D+ GAL + K++HRP
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  205  ALPRADLPEFYRRLAAEPLNPATRLAIHLLMLTMTRPGEVRFARWDEFDMARAEWRIPAE  264
            AL  + LPE+  R+++   +P T+LA+ L +L   R++E+R+ARW E+D+  A W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  265  R------------MKMRAPHIVPLSRQALAVLEELRLISGHCELLFPSERKLTDPMSENT  312
            R             KMR+PH+VPLS+Q +A+L EL+  +G+  L+F + +    P+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  313  LSYAMGRMGYKGI--ATPHGFRALASTILNEEGF-DPDVIERQLAHAERNKVRAAY-HRA  368
            ++ A+  MGY        HGFRA+A + L E G+   D +ERQ++H ERN VRAAY H+A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  369  EYLDDRRKLLQWLADFYESQQGGNIRPMNFDR  400
            E L++RR +LQW ADF ++++   I P ++ +
Sbjct  358  EHLEERRLMLQWWADFLDANRERFISPFEYAK  389

326) BURPS1710b_1290 in NC_007434


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  259 bits (967),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 171/382 (45%), Positives = 260/382 (69%), Gaps = 25/382 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDEAREQLAAGIDPGEAK  85
            MFLLV+PNG++YWRL YR+LGK+KTLALGVYP V+L+ AR KRDEAR  ++ G+DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGPRPIAEIDS  145
            +  +  +++    SFE +AR W  S++  W+++ ++KVL+SLE +VFP IG R I+ +++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIVTGRCSRNPAADIDAQ-TVLKKGPGV  204
            P++L  VR  EA+ + E A R+ QR  AV +Y++ +G    NPA D+ +  T +K+    
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR----  173

Query  205  QHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWR  264
            QH + +  + +P+L+  I++Y+G+ VT+LA+ L  L F+R++E+  A WSE+D   A W 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  265  VPPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQG-RSHI  311
            +P+ER             KMR PH+VPLS+Q + +LA+L++  G++ ++F + ++ R  I
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  312  SNNTMLYALYRIGYKSR--MTGHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAY  368
            S+NT+  AL  +GY +   + GHGFR++A +AL E G+ +RD VERQM+H ERN V AAY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  369  VH-AEYLPERRRMMQAWGDHLD  389
            +H AE L ERR M+Q W+D LD
Sbjct  354  IHKAEHLEERRLMLQWWADFLD  375

327) PAU_01003 in NC_012962


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  258 bits (964),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 253/382 (67%), Gaps = 25/382 (6%)

Query  26   LYLLVKKNGARYWRLKYRIAGKEKLLALGIYPNLSLANARAKRDEAKQHLANGVDPAEVK  85
            ++LLV  NG+RYWRL+YRI GKEK LALG+YP++SL++AR+KRDEA++ +++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KTKQKEIIRQATNTFEAIAKEWHSYKLPNWSVGYADDLLESFNKDIFPYIGKRIITDIKP  145
            ++K+  ++ +   +FE IA+ WH+ +  +W+ + +D +L S++ ++FP+IG+R IT ++ 
Sbjct  61   RAKK--VVPDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LDMLETLRKMEQRGVLDKLKKIRQACSQVFKYAIVTGRSEYNPAAELSGALASPKVKHFP  205
             D+L  +R  E + + +   +++Q  S V +YA+ +G   YNPA +++GAL++ K +H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLLADELPLFLQTLSQYKGSIITQIATKLLLLTGVRTIELRAAKWDELDLDRKIWEIPLE  265
             L    LP +L  ++ YKG  +TQ+A  L LL  +R+ ELR A+W E+D+D  +W IP E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRTHIVPLSEQVLSLFKTLEVITGRFEFIFHGRNDPNKPMSEAA  313
            R             KMR  H+VPLS QV++++  L+  +G   +IF G +DP KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVIKRIGYGSR--ATGHGFRHTMSTILHEQGYNTAW----IETQLAHVDKNSIRGTYN  367
            +N+ ++ +GY++     GHGFR    + L E G    W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

328) Bamb_0912 in NC_008390


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  256 bits (957),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 160/380 (43%), Positives = 251/380 (67%), Gaps = 11/380 (2%)

Query  26   LFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPEVTLATARRKRDEARERLAAGIDPGEAK  85
            +FLLV P G RYWRL+YR  GKEK LALGVYPEV+L+ AR KRDEAR  ++ G+DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAEKRTVRLNAENSFEAVAREWHAKYAPTWSENHAGRILRRLEVDAFPWISGKPIADLAP  145
            +A K    L  + SFE +AR WHA     W+++H++++L+ LE + FP I+ + I+ L  
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PDVLDALRRVEKRGALETAHRLHANISQVCRYAVATGRAQRDVTADLRGALPPVQQEHMA  205
            PD+L ++R  E +   E A RL+  IS V RYAV +G  + + + D+ GAL  V+++H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  ALTDPKQVAELLRAIDGYQGTFPVMCALRLAPLLFQRPGELRAAEWAELDLDAGTWEIPS  265
            AL D  +++ELL  I++Y+G      A+ L  L+F R++ELR A W+E+D+D + W IP+
Sbjct  178  AL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  DR-----MKRTKQGKASGGAHIVPLSSQAVAVLGELHALTGNGRFLFPSVRTKDRPMSDN  320
            +R     +K + +G     +H+VPLS Q VA+L+EL++ +G+  ++F + +   +P+S+N
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  321  TINGALLRLGYN-GDTMTGHGFRAMARTILDEVLGLPAAIIEAQLAHAVKDPLGRAY-NR  378
            T+N AL  +GY+  + + GHGFRAMA + L E    +   +E Q++H  ++ +  AY ++
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  379  TAHLPQRREMMQRWADYLDG  398
            + HL +RR M+Q+WAD+LD+
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

329) ETAC_13020 in NC_020796


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  256 bits (958),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 245/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNPNGTKYWRLKYRVAGKEKLLAVGVYPNVTLADARVKREDAKRVLAAGGDPGQEK  85
            ++LLV+PNG++YWRL+YR+ GKEK LA+GVYP+V+L++AR KR++A+++++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QEEKRAKVMAVTNSFEKLAREWHEHKRPTWSKGYADDILEYLRKDIFPYIGKRAITDIKP  145
            +  K    + +  SFE +AR WH  ++  W+++ +D +L  L  ++FP+IG+R IT ++ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  MDMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVITGRAEHNPVVDLASALKTPKQKHFP  205
             D+L  +R  E + + +   + +Q    +  YAV +G    NP +D+A+AL T K++H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLMADQLGEFLRALADYSGSRVTQNATRLLMLTGVRTVELRAAEWAEVDLDLSLWQIPPE  265
             L   +L E+L  ++ Y G  VTQ A  L +L  +R+ ELR A W+E+D+D ++W IP+E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHIVPLSEQALAIMQEMRRISGKGKYIFPGRNDAGKPMSEAS  313
            R             KMR PH+VPLS Q +AI+ E++  +G    IF G +D+ KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVIKRIGYDGK--ATGHGFRHTMSTILHEQGYNTAW----VETQLAHADKNSIRGTYN  367
            +N+ ++ +GYD      GHGFR    + L E G    W    VE Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYLDA  388
            H A+ L+ RR MLQW AD+LDA
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

330) Dda3937_00938 in NC_014500


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  255 bits (953),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 158/382 (42%), Positives = 249/382 (66%), Gaps = 25/382 (6%)

Query  26   LYLLVNPNGSRYWRLKYRVDGKEKLLALGVYPAISLAQARGKRDEAKRGIAGGIDPNVAR  85
            ++LLV+PNGSRYWRL+YR+ GKEK LALGVYP +SL++AR KRDEA++ I+ G+DP   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   REEKIAREAQIKNTFQDIALEWHASKIKKWSAGYASDIMEAFNKDVFPYIGNKPIAQIKP  145
            R  K+  + Q+  +F++IA  WHAS+ K+W+ + +  ++ +++ +VFP+IGN+ I+ ++ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELLNVLRRMESRGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESSHYP  205
             +LL  +R  E++   E A +++QR + V RYA+ +G   YNPA D+++A+      H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLNAQELPEFFHALSEYTGSKlvllaarllilTGVRTGELRAANWQEIDTENARWEIPAE  265
             L+   LPE++  ++ Y G  +  LA  L +L  +R++ELR A W EID +NA W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHCVPLSRQAIAILDEIREMTGRYPLVFPGRNDPRNTMSEAS  313
            R             KMR PH VPLS+Q +AIL E++  +G   L+F G +DPR+ +SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVFKRIGYAGR--VTGHGFRHTMSTILHEQGYNTAW----IETQLAHVDKNAIRGTYN  367
            +N+ ++ +GY     V GHGFR    + L E G    W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMES  388
            H A+ L+ RR MLQW AD++++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

331) GM21_1254 in NC_012918


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  255 bits (952),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 159/380 (42%), Positives = 251/380 (67%), Gaps = 18/380 (4%)

Query  26   MYLLVTPNGGKCWRLKYRFGGKEKVLALGTYPEISLVDARQRRHEARKLLANGVDPNEIK  85
            M+LLV PNG++ WRL+YR+ GKEK LALG YPE+SL +AR +R+EARKL+++GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAQKAATITETENSFEVVAREWHQKFSPSWSGVHSDTTLRRLQADVFPAIGARPISEIKA  145
            +A+K   + + + SFE +AR WH   +  W+  HSD  L+ L+++VFP IG R I+ +++
Sbjct  61   RAKK--VVPDLQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PDALAMLRRIESRGALETAHRIRTICGQVFRYAVATGRAERDCTADLKGALPPCKKSHLA  205
            PD L  +R  E++   E A R++   + V RYAV +G    + + D+ GAL   K+ H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  AITDPKAVAPLLRAIDGYQGTIPVKSALQLAAMFFVRPGELRQAEWSEIDFENALWNIPA  265
            A+  ++ ++ LL  I++Y+G    + A+ L  + F+R++ELR A WSEID++NA+W IPA
Sbjct  178  ALDLSR-LPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  SR------------MKMKEPHIVPLASHAIAILKELQALTGRSRFLFPSGRSFTRPMSNN  313
             R             KM+ PH+VPL+ + +AIL ELQ+ +G + ++F +++   +P+S+N
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  314  AINAALRRMGFD-KDEMTGHGFRAMARTILDEVLQFRPDFIEHQLAHAVKDPNGRAY-NR  371
            ++N ALR MG+D  +++ GHGFRAMA + L E      D +E+Q++H  ++    AY ++
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  372  TAHLAERRKMMQTWAEYLDD  391
            + HL ERR M+Q WA++LD 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

332) MYA_1732 in NC_017920


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  254 bits (950),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 162/377 (43%), Positives = 247/377 (66%), Gaps = 20/377 (5%)

Query  26   MYLEIMPNGSKYWRLKYRIDGKEKRMALRVYPAVTLLAARKARDEIKDQLRAGLDPSHEK  85
            M+L + PNGS+YWRL+YRI GKEK +AL VYP V+L  AR  RDE +  +  G+DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KRVKAQRSLDRENSFEPIAREWHQQKKGAWSERHADRIMKLLERELFPAIGARPIAEIMA  145
            +  K    L  + SFE IAR WH  +K  W++ H+D+++K LE ++FP IG R I+ + +
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PELLAVIRKIEARDAIELAHKTIQATSQIFRYAIATGRAERDSAPDLRGALKPRFVVHMR  205
            P+LL  +R  EA++  E+A +  Q  S + RYA+ +G    ++A D+ GAL      H  
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  RVSEAELPELMRQISAYDGDFQTRLALQFMALTFVRTSELRFAEWTEID-EKKEWRIPPE  264
             +  + LPEL+ +I++Y G+  T+LA+ +  L F+R+SELR+A W+EID ++  W IP+E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  265  K------------MKMRTPHIVPLSTQALEVIAKLPELNGHSQFLFPSRSSSKKPMSENT  312
            +             KMRTPH+VPLS Q + ++A L    G++ ++F +   ++KP+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  313  ILYALYRMGYHSR--MTGHGFRGLASTILNEHSF-NRDWIERQLAHSERDGVRAAYNH-A  368
            +  AL  MGY++   + GHGFR++A + L E ++ +RD +ERQ++H ER+GVRAAY H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  369  EYLPERRKMMQWWSNYL  385
            E L ERR M+QWW+++L
Sbjct  358  EHLEERRLMLQWWADFL  374

333) GBP346_A1152 in NC_012695


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  251 bits (937),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 170/382 (45%), Positives = 260/382 (69%), Gaps = 25/382 (6%)

Query  46   MFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDEAREQLAAGIDPGEAK  105
            MFLLV+PNG++YWRL YR+LGK+KTLALGVYP V+L+ AR KRDEAR  ++ G+DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  106  KEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGPRPIAEIDS  165
            +  +  +++    SFE +AR W  S++  W+++ ++KVL+SLE +VFP IG R I+ +++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  166  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIVTGRCSRNPAADIDAQ-TALKKGPGV  224
            P++L  VR  EA+ + E A R+ QR  AV +Y++ +G    NPA D+ +  T++K+    
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR----  173

Query  225  QHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTCVRTTEMIRAEWSEFDEAAAEWR  284
            QH + +  + +P+L+  I++Y+G+ VT+LA+ L  L  +R++E+  A WSE+D   A W 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  285  VPPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQG-RSHI  331
            +P+ER             KMR PH+VPLS+Q + +LA+L++  G++ ++F + ++ R  I
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  332  SNNTMLYALYRIGYKSR--MTGHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAY  388
            S+NT+  AL  +GY +   + GHGFR++A +AL E G+ +RD VERQM+H ERN V AAY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  389  VH-AEYLPERRRMMQAWGDHLD  409
            +H AE L ERR M+Q W+D LD
Sbjct  354  IHKAEHLEERRLMLQWWADFLD  375

334) SEEH1578_21245 in NC_021810


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  251 bits (936),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 155/378 (42%), Positives = 253/378 (67%), Gaps = 25/378 (6%)

Query  28   LLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEARKA  87
            LL++  GS+ WR+RYR+ GK K +++GVY +VSL++AR+KRDEAR +++ G++P E ++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   NKIALQFAHENSFESVAREWHSSKKTTWSEGYAKEVLNCMERDIFPFIGQRPIEQIEPLE  147
            +K+  ++  + SFE +AR WH+S+K  W+++ +  VL+ +E ++FPFIG+R I  ++  +
Sbjct  63   KKVVPDL--QLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  148  LLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGRAKYNFAPDLAIALNKPKTQHFPFL  207
            LL  ++  E +   E +S++++R + V+RYAV +G  +YN A D+A AL   K QH P L
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  208  TESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNALWEIPKER-  266
              S LPE+++ +++Y+G  VT+ A  L +L  +R+ ELR A W+E+D+DNA+W IP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  267  -----------MKKRRPHLVPLSTQAISILKKLQEITGNYSLVFPGRNDVRKPMSEASIN  315
                        K R PHLVPLS Q ++IL  LQ  +G+ +L+F G +D RKP+SE ++N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  316  KVIKLLGYHGR--LTGHGFRHTMSTILHELGFESAW----IEMQLAHVDKNSIRGTYNH-  368
            K ++++GY+    + GHGFR    + L E G+   W    +E Q++H ++N++R++Y H 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYIHK  356

Query  369  AQYLENRRKMMQIYSDML  386
            A+ LE+RR M+Q  +D L
Sbjct  357  AEHLEERRLMLQWWADFL  374

335) CFSAN002069_19870 in NC_021812


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  251 bits (936),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 155/378 (42%), Positives = 253/378 (67%), Gaps = 25/378 (6%)

Query  44   LLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEARKA  103
            LL++  GS+ WR+RYR+ GK K +++GVY +VSL++AR+KRDEAR +++ G++P E ++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  104  NKIALQFAHENSFESVAREWHSSKKTTWSEGYAKEVLNCMERDIFPFIGQRPIEQIEPLE  163
            +K+  ++  + SFE +AR WH+S+K  W+++ +  VL+ +E ++FPFIG+R I  ++  +
Sbjct  63   KKVVPDL--QLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  164  LLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGRAKYNFAPDLAIALNKPKTQHFPFL  223
            LL  ++  E +   E +S++++R + V+RYAV +G  +YN A D+A AL   K QH P L
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  224  TESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNALWEIPKER-  282
              S LPE+++ +++Y+G  VT+ A  L +L  +R+ ELR A W+E+D+DNA+W IP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  283  -----------MKKRRPHLVPLSTQAISILKKLQEITGNYSLVFPGRNDVRKPMSEASIN  331
                        K R PHLVPLS Q ++IL  LQ  +G+ +L+F G +D RKP+SE ++N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  332  KVIKLLGYHGR--LTGHGFRHTMSTILHELGFESAW----IEMQLAHVDKNSIRGTYNH-  384
            K ++++GY+    + GHGFR    + L E G+   W    +E Q++H ++N++R++Y H 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYIHK  356

Query  385  AQYLENRRKMMQIYSDML  402
            A+ LE+RR M+Q  +D L
Sbjct  357  AEHLEERRLMLQWWADFL  374

336) SeHA_C2638 in NC_011083


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  251 bits (936),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 155/378 (42%), Positives = 253/378 (67%), Gaps = 25/378 (6%)

Query  44   LLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEARKA  103
            LL++  GS+ WR+RYR+ GK K +++GVY +VSL++AR+KRDEAR +++ G++P E ++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  104  NKIALQFAHENSFESVAREWHSSKKTTWSEGYAKEVLNCMERDIFPFIGQRPIEQIEPLE  163
            +K+  ++  + SFE +AR WH+S+K  W+++ +  VL+ +E ++FPFIG+R I  ++  +
Sbjct  63   KKVVPDL--QLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  164  LLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGRAKYNFAPDLAIALNKPKTQHFPFL  223
            LL  ++  E +   E +S++++R + V+RYAV +G  +YN A D+A AL   K QH P L
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  224  TESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNALWEIPKER-  282
              S LPE+++ +++Y+G  VT+ A  L +L  +R+ ELR A W+E+D+DNA+W IP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  283  -----------MKKRRPHLVPLSTQAISILKKLQEITGNYSLVFPGRNDVRKPMSEASIN  331
                        K R PHLVPLS Q ++IL  LQ  +G+ +L+F G +D RKP+SE ++N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  332  KVIKLLGYHGR--LTGHGFRHTMSTILHELGFESAW----IEMQLAHVDKNSIRGTYNH-  384
            K ++++GY+    + GHGFR    + L E G+   W    +E Q++H ++N++R++Y H 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYIHK  356

Query  385  AQYLENRRKMMQIYSDML  402
            A+ LE+RR M+Q  +D L
Sbjct  357  AEHLEERRLMLQWWADFL  374

337) Dd586_2842 in NC_013592


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  250 bits (932),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 245/382 (65%), Gaps = 25/382 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKMLALGVYPEISLSEARQRRDEAKRQVTNSIDPSEKK  85
            M L+VHPNGS+YWRL+YR+ GK+K LALGVYPE+SLSEAR +RDEA++ +++++DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KVEKQARKVAVENTFKSVALEWHEYKRPNWSKGYAEDLMEAFENDIFPDIGKRPIAEIEP  145
            +  K    + +  +F  +A  WH  ++ +W+++ ++ ++ ++E ++FP IG+R I+ ++ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LEALTTLRKLEKRGVLDKLRKVRQACKQVCTYAIVTGRAKTNPFAELASALTTAKSTHYP  205
             + L  +R  E + + +   +++Q    V  YA+ +G  + NP  ++A+ALTT K  H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLLADQLPAFLKALEAYSGSPITRLATRILMLTGVRTIELRLAEWKEFDFDKRVWEVPVE  265
             L   +LP +L  + +Y G P+T+LA  + +L  +R+ ELR A W E+D+D+ +W +P E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHLVPLSDQVIEALRELQMITGRYNLVFPGRNDITKPISEAS  313
            R             KMR PHLVPLS QV+  L ELQ  +G   L+F G +D  KPISE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEEGFNTAW----IELQLAHVDKNTIRGTYN  367
            +N+ L+ +GY+      GHGFR    + L E G+   W    +E Q++H ++N +R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQHLENRRGMLQWYADYLES  388
            H A+HLE+RR MLQW AD+L++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

338) SU5_02989 in NC_017623


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  250 bits (935),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 155/378 (42%), Positives = 253/378 (67%), Gaps = 25/378 (6%)

Query  5    LLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEARKA  64
            LL++  GS+ WR+RYR+ GK K +++GVY +VSL++AR+KRDEAR +++ G++P E ++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  65   NKIALQFAHENSFESVAREWHSSKKTTWSEGYAKEVLNCMERDIFPFIGQRPIEQIEPLE  124
            +K+  ++  + SFE +AR WH+S+K  W+++ +  VL+ +E ++FPFIG+R I  ++  +
Sbjct  63   KKVVPDL--QLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  125  LLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGRAKYNFAPDLAIALNKPKTQHFPFL  184
            LL  ++  E +   E +S++++R + V+RYAV +G  +YN A D+A AL   K QH P L
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  185  TESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNALWEIPKER-  243
              S LPE+++ +++Y+G  VT+ A  L +L  +R+ ELR A W+E+D+DNA+W IP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  244  -----------MKKRRPHLVPLSTQAISILKKLQEITGNYSLVFPGRNDVRKPMSEASIN  292
                        K R PHLVPLS Q ++IL  LQ  +G+ +L+F G +D RKP+SE ++N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  293  KVIKLLGYHGR--LTGHGFRHTMSTILHELGFESAW----IEMQLAHVDKNSIRGTYNH-  345
            K ++++GY+    + GHGFR    + L E G+   W    +E Q++H ++N++R++Y H 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYIHK  356

Query  346  AQYLENRRKMMQIYSDML  363
            A+ LE+RR M+Q  +D L
Sbjct  357  AEHLEERRLMLQWWADFL  374

339) int in NC_014228


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  248 bits (927),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 157/381 (42%), Positives = 248/381 (66%), Gaps = 25/381 (6%)

Query  26   LYLLVNPNGARYWRLKYRIAGKEKLLALGVYPDISLAEARTKRNEARRTLSDGNDPIeek  85
            ++LLV+PNG+RYWRL+YRI GKEK LALGVYP++SL+EARTKR+EAR+ +S+G DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kaekaakaFAVSNSFESIAIEWHEHKRPNWSKGYAEDILEYLKKDIFPYIGKRAVTEIKP  145
            +A K    + +S  FE IA  WH  ++ +W+++ ++ +L  L  ++FP+IG+R +T ++ 
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  AEMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVITGRAEFNPVTDLASALKTPKQKHFP  205
            +++L  +R  E + + +   + +Q    +  YAV +G   +NP  D+A+AL T K++H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLLADQMNEFLIALAGYSGSEVTQSATRLLMLTGVRTIELRESEWTEFDFDKDIWQIPAE  265
             L   ++ E+L  +++Y G  VTQ A  L +L  +R+ ELR + W+E+D+D+ +W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHIVPLSNQVKAILIKLHSITGRGKYVFPGRNDAGKPMSEAA  313
            R             KMR PH+VPLS+QV AIL  L++ +G    +F G +D+ KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVIKRIGYDGR--ATGHGFRHTMSTILHEQGYNTAW----IETQLAHVDKNSIRGTYN  367
            +N+ ++ +GYD      GHGFR    + L E G    W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLEGRREMLQWYADHME  387
            H A+ LE RR MLQW AD ++
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

340) A1122_00590 in NC_017168


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

341) YpAngola_A3853 in NC_010159


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

342) YPC_0922 in NC_017265


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

343) int4 in NC_005810


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

344) int in NC_003143


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

345) int in NC_017154


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

346) int in NC_017160


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

347) y3271 in NC_004088


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

348) YPN_3086 in NC_008149


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

349) int in NC_014029


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

350) NAL212_1009 in NC_015222


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  247 bits (922),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 157/380 (42%), Positives = 251/380 (67%), Gaps = 20/380 (5%)

Query  25   LYLLVKATG-KYWRMDYRFVGKRKTLAIGVYPTVSLVAARKKRDEARELLGKHIDPSLAK  83
            ++LLV + G +YWR+ YR++GK KTLA+GVYP VSL  AR KRDEAR L++  +DP   K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  84   AINKRIVLTAAENTFKAVALEWHTKTSKSWAESTANNIKRYLEKDIFPWLGNRAIKDIGA  143
              +K  V+   + +F  +A  WH+ ++K WA+S ++++ + LE ++FP +GNR I  + +
Sbjct  61   RAKK--VVPDLQLSFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  144  PDLLAVLRKIESRGAHEKAQRCREYAGRVFRYAIATGRAERDPSGDLRGALTPVKVKHHA  203
            PDLL  +R  E++   E A R ++  + V RYA+ +G    +P+ D+ GALT VK +H++
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  204  SITEPKAIGALLRSIWGFNGSYITKCALQLAPLVFVRPGELRQAEWQEIDFDKQEWRIAG  263
            ++  ++ +  LL  I +++G  +T+ A+ L  LVF+R++ELR A W EID+D+  W I++
Sbjct  178  ALDLSR-LPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  264  NK------------MKMGEAHIIPLSPQVIEILQSIHPLTGDGQYIFPSIRSSARPMSEN  311
            ++             KM  +H++PLS QV+ IL  ++  +G+   IF + + + +P+SEN
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  312  TINAALRRMGYE-KDEMTGHGFRSMASTLLHEHG-WPHEAIERQLAHAERNKVVAAYNY-  368
            T+N ALR MGY+  +++ GHGFR+MA + L E G W+++A+ERQ++H ERN V AAY   
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  369  AEHLPKRKEMMRWWADYLDE  388
            AEHL  R+ M++WWAD+LD 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

351) YPDSF_0629 in NC_009381


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 246/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LALGVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWVEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

352) YpsIP31758_0884 in NC_009708


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LA+GVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

353) int in NC_006155


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LA+GVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

354) YPTS_3293 in NC_010634


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LA+GVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

355) YPK_0925 in NC_010465


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNK  85
            ++LLV+ NGSRYWRL+YR+ GKEK LA+GVYP+VSL+ AR KRDEA+K+++ G DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKP  145
            +  K+    +   +FE I+R W      +W++S    ++ ++E++VFP+IG R I  ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYP  205
             +L+  +   E +   E   +++QR + V +YA+ +G   YNPA D+A+A++  KR+H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAV  265
             L ++ +PE+LS ++SY G  + +LA+ L +L   R++ELR A W+E+D+DNA+W IPA 
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHMVPLPDQAITILKQIQPISGRYQFVFPGRIQHSKPISEMT  313
            R             KMR PH+VPL+ Q ++IL ++Q  +G   ++F G  +  KPISE T
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  LNVLIRRIGYGGR--ATGHGFRHTMSTILHEQGFNTAW----IETQLAHVDKNSIRGTYN  367
            +N  +R +GY+      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDS  388
            H A+ L+ RR MLQW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

356) W5S_3565 in NC_017845


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  246 bits (918),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 158/382 (42%), Positives = 250/382 (66%), Gaps = 25/382 (6%)

Query  26   LYLLVKPNGARYWRLKYRVAGKEKLLALGVYPDVTLadarakrdeakrGIAGGIDPSEAK  85
            ++LLV PNG+RYWRL+YR+ GKEK LALGVYP+V+L++AR+KRDEA++ I+ G+DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RKEKAILEAQVNNTFQDIATEWHSSKLKKWSEGYASDIMEAFNKDVFPYIGKKPIAEIKP  145
            R  K + + Q+  +F++IA  WH+S+ K+W+++ +  ++ +++ +VFP+IG++ I+ ++ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELLNVLRRMEGRGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESSHYP  205
             +LL  +R  E++   E A +++QR + V RYA+ +G   YNPA D+++A+      H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLAAPDLPAFFEALSSYSGSMLVVLAARLLIITGLRTGELRGATWKEIDSDTAVWEIPAE  265
             L  + LP ++  ++SY G  +  LA  L ++  +R++ELR A W EID D A+W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHIVPLSSQAQAIIARIREMTGRYPHIFPGRNDPRKTMSEAS  313
            R             KMR PH+VPLS Q  AI+A ++  +G    IF G +DPRK +SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVFKRIGYSGK--VTGHGFRHTMSTILHEQGYNTAW----IETQLAHVDKNSIRGTYN  367
            +N+ ++ +GY     V GHGFR    + L E G    W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDA  388
            H A+ L+ RR MLQW AD++DA
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

357) Pcar_1823 in NC_007498


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  246 bits (917),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 154/380 (41%), Positives = 247/380 (65%), Gaps = 10/380 (2%)

Query  31   LFLLVTPTGSKLWRFKYRLNGKPKLMSFGAYPEVSLEQAREKRTAARKQVANGIDPCVVR  90
            +FLLV P GS+ WR++YR+ GK K +++G YPEVSL +AR KR  ARK +++G+DPC  +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  91   RAVKESQAAGEGSFEVVAREWHQKFSSTWSESHAKTQLGRMERDLFPWLGDRPIVEITSP  150
            RA K   +  + SFE +AR WH   +  W++SH+   L  +E ++FP +G+R I  + +P
Sbjct  61   RA-KKVVPDLQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  151  ELLAVLRRIESRGALETAHRVKTICGQIFRYAIATGRAERDPAADLKGALPPVQATHHAA  210
            +LL  +R  E++   E A R++   + + RYA+ +G    +PA D+ GAL  V+  H++A
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  211  MTKPGDLADLLRTIDAYEGSHVVRCALRFAPLVFVRPGELRQAEWSEFDLDAGEWNIPVE  270
            +   + L++LL  I++Y G  V + A+ +  LVF+R++ELR A WSE+D+D + W IP E
Sbjct  179  LD-LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  271  RMKLPKKTKIRRAGE---AHLVPLSKQAVEILRDLQPLTGDGLYVFPSVRSAGRPMSDNT  327
            R  LP     +R++    +HLVPLSKQ V IL +LQ  +G+   +F + + + +P+S+NT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  328  INAALRRLGY-SKDEATGHGFRATA-RTILDEVLQVRPDLIEHQLAHSVRDPLGRAY-NR  384
            +N ALR +GY + ++  GHGFRA A  ++++  L  R D +E+Q++H  R+ +  AY ++
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSR-DAVERQMSHQERNGVRAAYIHK  356

Query  385  TSFLPERREMMQLWADYLDG  404
            +  L ERR M+Q WAD+LD+
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

358) Gbem_3253 in NC_011146


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  245 bits (915),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 162/381 (43%), Positives = 251/381 (66%), Gaps = 21/381 (5%)

Query  26   MYLLVTPQGGKCWRLKYRIAGKEKVLALGTYPEISLSEARERKDAARKLIANGHDPGevk  85
            M+LLV P+G++ WRL+YRI GKEK LALG YPE+SLSEAR ++D ARKLI++G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kaqkaaktaeaeNTFQAVTQEWHGRFKSQWSEKHAEQILRRLELDVFPWLGTRPVGEIKA  145
            +A+K     +   +F+ +++ WH+  + QW++ H++++L+ LE +VFP +G R +  +++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PELLAVLRRIEMRTL-ETAHRVRIACSQVFRYAVATGRAERDPVADLKGALPPVKNNHFA  204
            P+LL  +R  E + + E A R++   S V RYAV +G    +P  D+ GAL  VK +H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  205  ALTDPKAVAPLLRAIDGFEGSFVVKCALKLAALTFVRPGELRHAEWSEIDLEAARWEIPA  264
            AL  ++ ++ LL  I+++ G  V + A+ L  L F+R++ELR A WSEID++ A W IPA
Sbjct  178  ALDLSR-LPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  265  ER------------MKMKVAHLVPLSTQAVDILKELHPLTGSGTYVFPCHRSPLRCMSEN  312
            ER             KM+ +HLVPLS Q V IL EL+  +G    +F   + P + +SEN
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  313  AVNAALRRMGFEKS-EITGHGFRAMA-RTILDEVLHVRPDFIEHQLAHAVKDPLGRAY-N  369
            +VN ALR MG++ + ++ GHGFRAMA  ++++  L  R D +E+Q++H  ++ +  AY +
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSR-DAVERQMSHQERNGVRAAYIH  355

Query  370  RTSHLAERQKMMQTWADFLDG  390
            ++ HL ER+ M+Q WADFLD+
Sbjct  356  KAEHLEERRLMLQWWADFLDA  376

359) Bcep1808_0425 in NC_009256


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  245 bits (914),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 157/378 (42%), Positives = 255/378 (68%), Gaps = 19/378 (5%)

Query  30   LYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRLLAEGKNPAFER  89
            ++L ++++GS+ WRL+YR+ GKE+ L++G YP  SL++AR++RDEA++L++EG +P  ++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  90   DVEKQTRAIAAQNTFEAVALEWYEAQQATWSASHANRVKKQLDREVFPLIGQRPISSIGA  149
               K    +  Q +FE +A  W  +++  W+ SH+++V K L+ +VFP+IG+R I+++ +
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  150  PDLLAVVRRIEGREAFETARKTLQTCGQVFRYAVATSRAERDPSPDLRGALKAVPVKHMA  209
            PDLL  VR  E+++ +E A +  Q  + V RYAV ++    +P+ D+ GAL +V  +H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  210  RVGESELPELLRSIASYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERREWRIPAE  269
             ++ S LPELL  I+SY G+P T+LA+ +  L F+R+ ELR A W+EID++   W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  270  K------------MKMRRVHIVPLAEQAIALLSELRALTGHRRWLFPNSRRPLQQMSENT  317
            +             KMR  H+VPL+ Q +A+L+EL++ +G+   +F  ++ P + +SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  318  ILYALYRMGYRSR--MTGHGFRGLASTILNEKGF-NSDWIERQLAHSEQDGVRAAYNH-A  373
            +  AL  MGY +   + GHGFR++A + L E G+ + D +ERQ++H E++GVRAAY H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  374  EYLSERHRMMQWWADYLD  391
            E L ER+ M+QWWAD+LD
Sbjct  358  EHLEERRLMLQWWADFLD  375

360) MADE_1010570 in NC_011138


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  245 bits (913),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 251/384 (66%), Gaps = 24/384 (6%)

Query  28   LLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVSLKDAREAVSEARRQLRDDIDPSAIKQE  87
            LLV  NGS+YWRL+YR+ GK+KTLA+GVYPEVSL +AR    EAR+ + +++DP   K+ 
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   KKHLSSVSEIEL-FNTQARLWWNKQKGQWSEGHAARIWTRLNDNALKTLGKRPIGEITPQ  146
            KK    V++++L F+  AR +W+  + QW+++H+ ++   L+ + +  +G+R I  +   
Sbjct  63   KK---VVPDLQLSFEHIAR-RWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  147  DIIRTVQKIETRGALDVAQRVLQDIRRVCRFAVQTGVLLHNPASELSGILEKRKTSHRAS  206
            D++  V+  E++   ++A R+ Q I  V R+AVQ+G++  NPA +++G L   K  HR++
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  207  LPREELPQFLRDLDAYHQQGRLLTKLAIELLVHTFVRPGELAGARWDEFDLEEKLWRIPA  266
            L    LP++L  +++Y  +G+ +T+LA+ L +  F+R++EL  ARW E+D+++ +W IPA
Sbjct  179  LDLSRLPELLSRIGSY--KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  267  HR------------MKMKSDHIVPLSRQALAVLENTKPFSARFEFVFPSERDRFKQMSDN  314
            +R             KM++ H+VPLS+Q +A+L + +  ++   ++F + +D  K +S+N
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  315  TMRMAIFRMGYDGETKGKSKANPHGFRATASSILNETGF-NPDAIERQLSHMERNGVRAA  373
            T+  A+  MGYD           HGFRA A S L E+G+ + DA+ERQ+SH ERNGVRAA
Sbjct  297  TVNKALRVMGYD----TTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  374  YTHHARYLEERKEMMQWWSDYLDS  397
            Y H A  LEER+ M+QWW+D+LD+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDA  376

361) MYA_0364 in NC_017920


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  244 bits (911),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 156/378 (42%), Positives = 255/378 (68%), Gaps = 19/378 (5%)

Query  30   LYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRLLAEGKNPAFER  89
            ++L ++++GS+ WRL+YR+ GKE+ L++G YP  SL++AR++RDEA++L++EG +P  ++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  90   DVEKQTRAIAAQNTFEAVALEWYEAQQATWSGSHANRVKKQLDREVFPLIGQRPISSIGA  149
               K    +  Q +FE +A  W  +++  W+ SH+++V K L+ +VFP+IG+R I+++ +
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  150  PDLLAVIRRIEGREAFETARKTLQTCGQVFRYAVATSRAERDPSPDLRGALKAVPVKHMA  209
            PDLL  +R  E+++ +E A +  Q  + V RYAV ++    +P+ D+ GAL +V  +H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  210  RVGESELPELLRSIAAYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERREWRIPAE  269
             ++ S LPELL  I++Y G+P T+LA+ +  L F+R+ ELR A W+EID++   W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  270  K------------MKMRRVHIVPLAEQTIALLAELRALTGHRRWLFPNSRRPLQQMSENT  317
            +             KMR  H+VPL+ Q +A+LAEL++ +G+   +F  ++ P + +SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  318  ILYALYRMGYRSR--MTGHGFRGLASTILNEKGF-NSDWIERQLAHSEQDGVRAAYNH-A  373
            +  AL  MGY +   + GHGFR++A + L E G+ + D +ERQ++H E++GVRAAY H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  374  EYLSERHRMMQWWADYLD  391
            E L ER+ M+QWWAD+LD
Sbjct  358  EHLEERRLMLQWWADFLD  375

362) SSON53_21650 in NC_016822


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  244 bits (910),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 132/329 (41%), Positives = 219/329 (67%), Gaps = 17/329 (5%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M+LL++ NGS+YWR++YR+ GKEK L++GVYP+V+L++AR KR EARKL++ G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            +  K+  ++ L  +FE IAR WH S+ + W+    D ++ ++E ++FP+IG+R I+ ++ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL ++R  E +   E   +++QR + V RYA+ +G   YNPA D+A+AL+T K+ H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + LP++L+ +++Y G  +T+ A  + +L  +R+ ELR+ARW +ID++  +W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+ PH+VPLS QV+ ++ +L+  + ++ L+F G +DPRKPIS ++
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTIL  340
            +N+ + ++GY     + GHGFR    + L
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSAL  326

363) YE105_C3845 in NC_015224


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  243 bits (906),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 151/376 (41%), Positives = 241/376 (65%), Gaps = 25/376 (6%)

Query  28   LLIEPNGSKGWRFRYRFAGKARLMSLGTYDLISLAEARSKRDMARKQVADGTDPAEVKKA  87
            LL++PNGS+ WR+RYR+ GK + ++LG Y  +SL+EAR+KRD ARK +++G DP E K+A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   DKLAQRLSSENSFEAISREWHKAKADRWSLGYREEIMSTFEADIFPYIGKRPIAEITPLE  147
             K+   L  + SFE I+R WH A   +W+ +  + ++ ++E+++FP+IG+R I+ +   +
Sbjct  63   KKVVPDL--QLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  148  LLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASALSTPKKQHYPFL  207
            LL  ++  E +   E + +++QR + V RYA+ +G   YNPA D+A+AL+T K+QH P L
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  208  SAEEMPYFIRDLEGYTGSIITKNAAKILMLTGVRTKEMRFATWQEIDLENGLWEIPAER-  266
                +P ++  + +Y G  +T+ A  + +L  +R+ E+R+A W EID++N++W IPAER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  267  -----------MKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFIGRNDRKKPISKETVN  315
                        KMR PH+VPLS QV+A++ +L   +G+   IF G +D +KPIS +TVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  316  QVIELLGYKGR--ATGHGFRHTMSTILHEQGYDSAW----IELQLAHVDKNSIRGTYNH-  368
            + + ++GY       GHGFR    + L E G    W    +E Q++H ++N++R++Y H 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYIHK  356

Query  369  AQYLEKRRDMLQWYAD  384
            A+ LE RR MLQW AD
Sbjct  357  AEHLEERRLMLQWWAD  372

364) Galf_2041 in NC_014394


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  241 bits (898),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 169/381 (45%), Positives = 246/381 (65%), Gaps = 21/381 (5%)

Query  26   MYIEVMPSGSKYWRLKYRYAGKEKRLALGVYPEVSLKdarerrdaarKLIANGTDPGEAK  85
            M++ V P+GS+YWRL+YR  GKEK LALGVYPEVSL +AR +RD ARKLI++G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QAQKREGKIAAANTFEAVAREWVENRSNDWTAGHKALTLRTLEQDAFPSIGRRPIAEISS  145
            +A+K    +    +FE +AR W +  +++W+ +H    L++LE + FP IG R I+ +++
Sbjct  61   RAKKVVPDLQL--SFEHIARRW-HASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  SEVLATVRAIEKRGALEIAGRVLQRCSAVFRYAIATDRCKNNPAFKMSEALKSPTRSHYN  205
            +++L  VRA E +   EIA+R+ QR SAV RYA+ ++  + NPA+ M+ AL +  R H  
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  TIEKGGFPKLLRDIDGYQGSPMTTYILQLMALTFTRTGELVNAEWKEIDLDRAEWLIPAE  265
            +++ + +P LL  I++Y+G P+T   + L  L F R++EL  A W EID+D A W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHLVPLSVQAVAVFREAAKLSGDRVHVFPNRNDPSQPASNAI  313
            R             KMR PHLVPLS Q VA++ E    +G+   +F   +DP +P S+  
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  ILRALGRMGY--TGKMTGHGFRSAASTMLNENKSKWGIHRDTIELQLAHVEKNASRAAYN  371
            + +AL  MGY  T  + GHGFR+ A + L E+ + W+  RD++E Q++H E+N+ RAAY 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIES-GLWS--RDAVERQMSHQERNGVRAAYI  354

Query  372  F-AEYLDERRTMMQQWADHLD  391
              AE L+ERR M+Q WAD LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

365) Bamb_2421 in NC_008390


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (894),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 169/382 (45%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDPGEak  85
            MFLLV+PNG++YWRL YR+LGK+KTLALGVYP V+L+ AR KRDEAR  I+ G+DP E  
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE--  58

Query  86   kdakraaeiaaansfeavaREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPMAEIDS  145
            +   +        SFE +AR W  S++  W+++ ++KVL+SLE +VFP IG R ++ +++
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQ-TVLKKGPGV  204
            P++L  VR  EA+ + E A R+ QR  AV +Y++ +G    NPA D+ +  T +K+    
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR----  173

Query  205  QHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWR  264
            QH + +  + +P+L+  I++Y+G+ VT+LA+ L  L F+R++E+  A WSE+D   A W 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  265  VPPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQG-RSHI  311
            +P+ER             KMR PH+VPLS+Q + +LA+L++  G++ ++F + ++ R  I
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  312  SNNTMLYTLYHMGYKSR--MTGHGFRGPTATALRELGF-GRDVVERQMAHAERNQVTAAY  368
            S+NT+  +L  MGY +   + GHGFR+ + +AL E G+ +RD VERQM+H ERN V AAY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  369  VH-AEYLPERRRMMQVWGDHLD  389
            +H AE L ERR M+Q W+D LD
Sbjct  354  IHKAEHLEERRLMLQWWADFLD  375

366) Fraau_3064 in NC_017033


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (894),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 169/380 (45%), Positives = 253/380 (67%), Gaps = 20/380 (5%)

Query  27   MFLHITTKG-RYWRLKYRVAGKEKLLALGVYPEVSLaearkrrdearrVIGEGGDPSAIR  85
            MFL +  +G RYWRL+YR+ GKEK LALGVYPEVSL+EAR +RDEAR++I+EG DP   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RTTKVTAVLATANTFQAVAEEWLAQHKARMAPATYNKAVWMLGDLVYPWLGRRPISDIEA  145
            R+ KV + L    +F+ +A  W A +K +  + + +K +  L   V+P +G R I+ +++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQWAQSHS-DKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PELLAVLRRIEARGAHTTAHRTKQRCGQVFRYAIATGRAKRDPSADLRGALAPLNPTSRA  205
            P+LL  +R  EA+     A R +QR + V RYA+ +G  + +P+ D+ GAL+ ++   R+
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  AITDPLRVGELLRAIDGYSGTFPVICALRLAPMLFVRPGELRHAEWAEFDLDQSLWRIPA  265
            A+ D  R+ ELL  I++Y G      A+ L  ++F+R++ELR A W+E+D+D+++W IPA
Sbjct  178  AL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  EK------------MKMRDEHLVPLPDQALAILRDLLPLTGPDGFLFPGERSASRPMSEN  313
            E+             KMR  HLVPL+ Q +AIL +L   +G +G++F G + + +P+SEN
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  314  TVNAALRRLGYD-KDTMTGHGFRAMASTRLNELG-WSPDVIERQLAHAERNKVRAAY-NR  370
            TVN ALR +GYD  + + GHGFRAMA + L E G WS D +ERQ++H ERN VRAAY ++
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  371  AQYLPERQRMMQAWADYLDS  390
            A+ L ER+ M+Q WAD+LD+
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

367) SeHA_C4738 in NC_011083


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 243/382 (64%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85
            ++LLV   G+RYWRL+YRI GKEK LALGVYP+VSL+EAR KRD+ARK+ISEG DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145
            R  K+   +  +  F+ +A  WH  +   W++S +  VL +L+ ++FP++G+R +T +  
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  +R  E +   E   +++Q  + + RYA+ +G    NPA +++++L++ K  H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    LP +L +++ Y G PVT++A  L LL  +R+ ELR A WSEID+DNA+WTIP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLS+Q   IL +L+T +G+  L+F G  D  KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNAIRGTYN  367
            +N  L+ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

368) SMD_1781 in NC_017671


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 165/393 (42%), Positives = 250/393 (64%), Gaps = 23/393 (5%)

Query  31   LYVQLNPDGSRWWRWDYRRPVTGKRNTLSLGTYPEVSLADARGRQAEARRLLASGIDPGE  90
            +++ ++P+GSR WR  YR  + GK +TL+LG YPEVSL++AR ++ EAR+L++ G+DP E
Sbjct  1    MFLLVHPNGSRYWRLRYR--ILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  91   HRkaakvagvekaaNSFEVVTREWLGKQK-WVESYRCKVVAWMDNDVFPWIGGRPVAELA  149
            +++A KV    +   SFE ++R W + +K W +S   KV+  ++ +VFP IG R ++ L 
Sbjct  59   QKRAKKVVPDLQL--SFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  150  APDFLRVARRIEERGAIESAHRIMQNCGQVMRYAVATGRADRNPVADLRGALAPPMERHH  209
            +PD+L   R  E +   E A R+ Q  + VMRYAV +G    NP  D+ GAL+    +H+
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  210  AAITDPRELGGLLRAIDGYAGDASTRAALRLAPLVFVRPGELRHAEWSEIDFDAGEWNIP  269
            +A+  +R L  LL  I++Y G++ T+ A+ L  LVF+R++ELR A WSEID+D + W IP
Sbjct  177  PALDLSR-LPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  270  AHK------------MKMREPHLVPLSSQAVAILRDLQPLTGHRQYVFPGGRSPKRPLSD  317
            A++             KMR PHLVPLS Q VAIL +LQ  +G+   +F G++ P++P+S+
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISE  295

Query  318  NALTAALRRMGFD-KETMTAHGFRATARTLLDEVLGWRPDLIEHQLAHAVRDPNGRAY-N  375
            N++  ALR MG+D  + + +HGFRA A + L E   W  D +E+Q++H  R+    AY +
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  376  RTSHLPERRKMMQAWADYLDALRADTGNVIVPF  408
            ++ HL ERR M+Q WAD+LDA R      I PF
Sbjct  356  KAEHLEERRLMLQWWADFLDANR---ERFISPF  385

369) int in NC_011745


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 154/380 (41%), Positives = 242/380 (64%), Gaps = 25/380 (6%)

Query  41   LLIEPNGSKGWRLRYRFAGKPKMLSLGVYPEVSLSDARTARDEAKRLIAGGVNPSEVRKA  100
            LL++PNGS+ WRLRYR+ GK K L+LGVYPEVSLS+ART RDEA++LI+ GV+P E ++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  101  QKREQANKCGNTFEVIAREWYEKRLDRWSPSYAEEMIETFEKDVFPYIGGRPIAEIKPME  160
            +K     +   +FE IAR W      +W+ S ++ ++ ++E +VFP+IG R I+ ++  +
Sbjct  63   KKVVPDLQ--LSFEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  161  LLAVLSRLNDRGATEKLRKVRQRCGEVFRYAIITGRAEYNPAPDLASAFAPHKKEHYAYL  220
            LL  +   + +   E   +++QR + V RYA+ +G   YNPA D+A+A++  K++H + L
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  221  KVDELPEFFRVFNTYTGSQIVKLGMRLLILTGLRPGELRQAEWQEIDFDNRLWEVPKER-  279
             +  LPE++  + +Y G  + +L++ L +L  +R++ELR A W EID+DN +W +P ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  280  -----------MKMRRPHCVPLSEQAIAILEQLKHMTGQYPFIFPGRIQHSKPMSEMAMN  328
                        KMR PH VPLS Q +AIL +L+  +G+  +IF G  +  KP+SE ++N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  329  VLIRRIGYAGR--VTGHGFRHTMSTILHEQGYNSAW----IETQLAHVDKNSIRGTYNH-  381
              +R +GY     V GHGFR    + L E G    W    +E Q++H ++N++R++Y H 
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYIHK  356

Query  382  AQYLDGRREMLQWYADYMDS  401
            A+ L+ RR MLQW AD++D+
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

370) SN31241_7100 in NC_021902


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (897),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 243/382 (64%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85
            ++LLV   G+RYWRL+YRI GKEK LALGVYP+VSL+EAR KRD+ARK+ISEG DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145
            R  K+   +  +  F+ +A  WH  +   W++S +  VL +L+ ++FP++G+R +T +  
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  +R  E +   E   +++Q  + + RYA+ +G    NPA +++++L++ K  H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    LP +L +++ Y G PVT++A  L LL  +R+ ELR A WSEID+DNA+WTIP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRKHVVPLSRQTTDILLQLKTFSGQYQLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLS+Q   IL +L+T +G+  L+F G  D  KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNAIRGTYN  367
            +N  L+ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

371) Selin_1494 in NC_014836


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (896),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 158/382 (42%), Positives = 246/382 (65%), Gaps = 18/382 (4%)

Query  31   LVFTIKPNGGKYWIMRYRYEKKSHELHLGTYPEVPLSKAREFREEVRVQVAAGIDPKRYR  90
            + + + PNG++YW +RYR   K   L LG YPEV+LS AR  R+E R  ++ G+DP    
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDP--CE  58

Query  91   EEAENQLLRQKEGSFESVARSWCEIQKPRWTERHGSDVINSLETNVFPYIGSRPIYELKP  150
            +   ++++ + + SFE +AR W   +K +W++ H+  V++SLET+VFP+IG+R I  L+ 
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  151  RELLDVVKVIDDRGASEIARRVLQRISAIYDYAFAHGLVELNPTAGLVKGLKPQKKQNFA  210
             +LL  V+  + +   EIA R+ QRISA+  YA   G++  NP+ ++  +L   K+Q+ +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  211  ALSAEEVPELVRAIEGYHGHPItklalklclltaSRTNEIRFASWQEFDLDNTLWCIPAE  270
            AL    +PEL+  I +Y G+P+T+LA+ L LL   R++E+R+A W E+D+DN++W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  271  R------------MKMRRDHRVPLSRQAVAVVEELIQYSGKNKYLFPNQNKPHTPITENT  318
            R             KMR  H VPLS+Q VA++ EL   +G N  +F   + P+ PI+ENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  319  MLYALYRMGFHKRSTV--HGFRTLFSTIANEKSDFSADAVERQLAHQEQNRIRAAY-HRA  375
            +  AL  MG++    V  HGFR++  +   E +  S DAVERQ++HQE+N +RAAY H+A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  376  DYLDERRELMQWWADYLDGQNN  397
            + L+ERR ++QWWAD+LD++ +
Sbjct  358  EHLEERRLMLQWWADFLDANRE  379

372) Bcen_1752 in NC_008060


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (896),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 171/382 (45%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDPGEak  85
            MFLLV+PNG++YWRL YR+ GK+KTLALGVYP V+L+ AR KRDEAR  I+ G+DP E  
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE--  58

Query  86   kdarraaeiaaansfeavaREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPIAEIDS  145
            +   +        SFE +AR W  S++  W+++ ++KVL+SLE +VFP IG R I+ +++
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQ-TVLKKGPGV  204
            P++L  VR  EA+ + E A R+ QR  AV +Y++ +G    NPA D+ +  T +K+    
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR----  173

Query  205  QHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWR  264
            QH + +  + +P+L+  I++Y+G+ VT+LA+ L  L F+R++E+  A WSE+D   A W 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  265  VPPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQG-RSHI  311
            +P+ER             KMR PH+VPLS+Q + +LA+L++  G++ ++F + ++ R  I
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  312  SNNTMLYALYRMGYKSR--MTGHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAY  368
            S+NT+  AL  MGY +   + GHGFR++A +AL E G+ +RD VERQM+H ERN V AAY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  369  VH-AEYLPERRRMMQAWGDHLD  389
            +H AE L ERR M+Q W+D LD
Sbjct  354  IHKAEHLEERRLMLQWWADFLD  375

373) Bcen2424_2364 in NC_008542


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  240 bits (896),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 171/382 (45%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDPGEak  85
            MFLLV+PNG++YWRL YR+ GK+KTLALGVYP V+L+ AR KRDEAR  I+ G+DP E  
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE--  58

Query  86   kdarraaeiaaansfeavaREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPIAEIDS  145
            +   +        SFE +AR W  S++  W+++ ++KVL+SLE +VFP IG R I+ +++
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQ-TVLKKGPGV  204
            P++L  VR  EA+ + E A R+ QR  AV +Y++ +G    NPA D+ +  T +K+    
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR----  173

Query  205  QHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWR  264
            QH + +  + +P+L+  I++Y+G+ VT+LA+ L  L F+R++E+  A WSE+D   A W 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  265  VPPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQG-RSHI  311
            +P+ER             KMR PH+VPLS+Q + +LA+L++  G++ ++F + ++ R  I
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  312  SNNTMLYALYRMGYKSR--MTGHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAY  368
            S+NT+  AL  MGY +   + GHGFR++A +AL E G+ +RD VERQM+H ERN V AAY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  369  VH-AEYLPERRRMMQAWGDHLD  389
            +H AE L ERR M+Q W+D LD
Sbjct  354  IHKAEHLEERRLMLQWWADFLD  375

374) AMBLS11_09695 in NC_018692


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  239 bits (890),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 248/382 (65%), Gaps = 24/382 (6%)

Query  28   LLVKSNGNKFWRLKYRFAGKQKTLALGSYPETPLSKARELTMQARLTVKSGVDPAAEKRE  87
            LLV +NG+++WRL+YR+ GK+KTLALG YPE +LS AR    +AR  +  GVDP  +KR 
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   K-VREEQRLNEDLFMNVAMEWWEQQSGGWTENHARRVWLRLKDNSFTALGKRPISTIRPR  146
            K V  + +L+   F ++A  +W+  +  W+++H+ +V   L  + F  +G+R I+T+   
Sbjct  63   KKVVPDLQLS---FEHIAR-RWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  147  DVIETVREIEKRGALDVAQRVLQDIGRVCRYAVQTERINFNPASELSDVLKSRKVEHRAS  206
            D++  VR  E +   ++A R+ Q I+ V RYAVQ+  I +NPA ++++ L + K +HR++
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  207  LPREQLPAFVKALSTYEEKGRLLTKYAIQLLVLTFVRPGELRGARWEEFNFDDNIWRIPA  266
            L   +LP ++  +++Y  KG+ +T+ A+ L +L F+R++ELR ARW E+++D+ +W IPA
Sbjct  179  LDLSRLPELLSRIGSY--KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  267  DR------------MKMRSEHIVPLSQQALQVIELIKPITQQYQLLFPSERDRNDPMSDN  314
            +R             KMR+ H+VPLS+Q + ++  ++  + +  L+F + +D   P+S+N
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  315  TMRRAIFKLGYDGTKPGKAKANPHGFRATASSILNEQGF-NPDAIERQLSHMERNGVRAA  373
            T+ +A+  +GYD T+        HGFRA A S L E G+ + DA+ERQ+SH ERNGVRAA
Sbjct  297  TVNKALRVMGYDTTQ----DVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  374  YTHHARYLDERKEMMQWWADYV  395
            Y H A  L+ER+ M+QWWAD++
Sbjct  353  YIHKAEHLEERRLMLQWWADFL  374

375) EcSMS35_3112 in NC_010498


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 242/382 (64%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85
            ++LLV   G+RYWRL+YRI GKEK LALGVYP+VSL+EAR KRD+ARK+ISEG DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145
            R  K+   +  +  F+ +A  WH  +   W++S +  VL +L+ ++FP++G+R +T +  
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  +R  E +   E   +++Q  + + RYA+ +G    NPA +++++L++ K  H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    LP +L +++ Y G PVT++A  L LL  +R+ ELR A WSEID+DNA+WTIP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLS+Q   IL +L+T +G+  L+F G  D  KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  L+ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

376) intB in NC_009485


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  237 bits (885),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 161/386 (42%), Positives = 250/386 (65%), Gaps = 29/386 (7%)

Query  26   LHLLITPDGAKYWRLAYRWHGKQRTLALGVYPAVGLIEARASRDDAKRSIAADIDPSIVK  85
            + LL+ P+G++YWRL YR  GK++TLALGVYP V+L EAR+ RD+A++ I+ ++DP   K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RERKRAAKIATGNTFEAVAREWHEN---WKDARSPYYAAQILRRLEADAFPAIGRRSIAA  142
            R +K  + +    +FE +AR WH +   W +++S     ++L+ LE++ FP IG R I++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQWAQSHS----DKVLKSLETHVFPFIGNRDITT  114

Query  143  LEPPELLDMLRKVEKRGVNETARRLKQLVGQIFRFAIVTGRAKRDPSVDLKDALRATGEP  202
            L+ P+LL  +R  E + + E A RL+Q ++ + R+A+ +G  + +P++D+ +AL +T   
Sbjct  115  LNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL-TTVKR  173

Query  203  QRHRAMPLSELPTFLQKLESYSGEQQTKLALKLVTLTFLRTTELRAGKWNELENLDENSA  262
            Q++ A+ LS LP +L ++ SY G+  T+LA+ L  L F+R++ELR ++W+E   +D ++A
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSE---IDIDNA  230

Query  263  LWRIPAER------------MKMRLEHLVPLSRQAVAALRELRTLSGGSPNIFPSPGKG-  309
            +W IPAER             KMR  HLVPLS+Q VA L EL+T +G +  IF ++    
Sbjct  231  MWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPR  290

Query  310  DCMSSNTMLYALYRMGYHGRATT--HGFRAVASTILNETNLFNRDWIERQLSHVERNEVR  367
              +S NT+  AL  MGY+       HGFRA+A + L E+ L +RD +ERQ+SH ERN VR
Sbjct  291  KPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVR  350

Query  368  RAY-NAAEWMPDRRRMMQWWADHITA  392
             AY + AE + +RR M+QWWAD + A
Sbjct  351  AAYIHKAEHLEERRLMLQWWADFLDA  376

377) EcE24377A_3377 in NC_009801


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  237 bits (885),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 158/382 (42%), Positives = 242/382 (64%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDISLAEARIKRDDARKIISEGGDPGEKK  85
            ++LLV   G+RYWRL+YRI GKEK LALGVYP++SL+EAR KRD+ARK+ISEG DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYTRSVLEALDKDIFPYLGKRSVTDILP  145
            R  K+   +  +  F+ +A  WH  +   W++S +  VL +L+ ++FP++G+R +T +  
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  +R  E +   E   +++Q  + + RYA+ +G    NPA +++++L++ K  H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    LP +L +++ Y G PVT++A  L LL  +R+ ELR A WSEID+DNA+WTIP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLS+Q   IL +L+T +G+  L+F G  D  KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  L+ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

378) C380_06330 in NC_018708


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  237 bits (884),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 160/383 (42%), Positives = 249/383 (66%), Gaps = 27/383 (7%)

Query  28   LYLEVTAAGGKYWRWKYRYGGKEKRLALGVYPDVTLAQAREARDQARKVLAGGDDPGQLK  87
            ++L V + G++YWR +YR  GKEK LALGVYP+V+L++AR  RD+ARK+++ G DP + K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  88   RDAKMTSAVHQANTFEAVARVWWE---HWRDGKSERHAAYAIKRLEADAFPVLGARPIAN  144
            R  K+ + ++   +FE +AR W     +W ++ S++     +K LE++ FP +G R I+ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQWAQSHSDK----VLKSLETHVFPFIGNRDITT  114

Query  145  ITAKDLTRMAKAVQDRGAIDLAHRVLQMAGQVMRYAVAHDLIERNPATDVKPSDTLRSRR  204
            + + DL    +A + +   ++A R+ Q  + VMRYAV  ++I  NPA D+  +++L + +
Sbjct  115  LNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDM--AGALTTVK  172

Query  205  KENYARLGEKELPELLRKIEAYQGGPYTRLAMQLMALTFVRTTELIAARWAEFDLQAAEW  264
            +++ + L+   LPELL +I +Y+G P T+LA+ L  L F+R++EL  ARW+E+D++ A W
Sbjct  173  RQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMW  232

Query  265  RIPPER------------MKMKTPHIVPLSPQAVEVLKVLHTLSGGRALLFPGERDHDKP  312
             IP+ER             KM+TPH+VPLS Q V +L  L+T +G  +L+F G +D  KP
Sbjct  233  TIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKP  292

Query  313  MSNNTILKALERMGYKGR--MTGHGFRGMASTILHEQGY-AHHAIELQLAHQERNEVSAA  369
            +S+NT+ KAL  MGY     + GHGFR+MA + L E G  +++A+E Q++HQERN V AA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  370  YNH-ALYLKERRVMMCDWANHLD  391
            Y H A  L ERR+M+  WA+ LD
Sbjct  353  YIHKAEHLEERRLMLQWWADFLD  375

379) Dret_1610 in NC_013223


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  237 bits (883),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 155/377 (42%), Positives = 246/377 (66%), Gaps = 18/377 (4%)

Query  26   LYLEIPPKGAYRWRFRYRFHGKPKMVSLGRYPDISLKQAREKRDEMRALVASSIDPSNYL  85
            ++L + P+G+  WR+RYR+ GK K ++LG YP++SL +AR KRDE R L++ ++DP +  
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   RQARHAAK-DDSFEAVAREWHKKFKSRWTEGHAATVLTRLEQNAFPWIGSQPIDSVTPLD  144
            R  +  +  + SFE +AR WH   + +W+++H+  VL  LE + FP IG++ I ++   D
Sbjct  61   RAKKVVPDLQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  145  ILPLLRRIEDRGAIELAHRVRGIISQVFRFAVANERASRDPASDLRDALTPRQENHFAAI  204
            +L  +R  E +   E+A R++  IS V R+AV +     +PA D+ +ALT  + +H +A+
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  205  TNPSEIPALLGAISEYQGHFVTRCALRLASLVFVRPGELRKAEWDEIDLAHQEWRLPPAK  264
             + S +P LL+ I+ Y+G+ VT+ A+ L  LVF+R++ELR A W EID+ +  W +P+ +
Sbjct  180  -DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  265  ------------TKLRKTHIIPLAHQACAIFNEIHPLTGTGRYVFPSARDKNKPMSENTI  312
                        +K+R  H++PL+ Q  AI+ E++  +G    +F +A+D  KP+SENT+
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTV  298

Query  313  NAALRQLGF-SKEKMTAHGFRSMASTRLNELG-WHPDAIERQLGHTEKNGVRAAYNH-AE  369
            N ALR +G+ + + + +HGFR+MA + L E G W  DA+ERQ++H E+NGVRAAY H AE
Sbjct  299  NKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAE  358

Query  370  YLEERRKMMQAWADYLD  386
             LEERR M+Q WAD+LD
Sbjct  359  HLEERRLMLQWWADFLD  375

380) PC1_2870 in NC_012917


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKTLALGVYPEITLSEARQRRDEAKRQIATGTDPSEQK  85
            M L+VHPNGS+YWRL+YR+ GK+KTLALGVYPE++LSEAR +RDEA++ I+ G DP EQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KVDKQLRQTLVDNTFKAIALEWHEYKRPNWSKGYAEDLMEAFENDIFPDIGKRPVAEIKP  145
            +  K + +  ++ +F  IA  WH  ++ +W+++ ++ ++ ++E ++FP IG+R ++ ++ 
Sbjct  61   RAKKVVPD--LQLSFEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIVTGRAENNpaselasalpppkaTHYP  205
             ++L ++R  E + + +   +++Q  + V RYA+ +G    NPA ++A+AL   K  H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLLPDELPTFLRALSTYSGSKVTQLATRILMLTGVRTIELRQAEWKEFDFEKGLWEVPKE  265
             L    LP +L  +++Y G  VTQLA  + +L  +R+ ELR A W E+D+++++W +P E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHLVPLSAQVIDALQQLQAVTGRYNLVFPGRNDITKPMSEAS  313
            R             KMR PHLVPLS QV+  L +LQ+ +G   L+F G +D  KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEQGYNTAW----IELQLAHVDKNTIRGTYN  367
            +N+ L+ +GY+      GHGFR    + L E G    W    +E Q++H ++N +R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLEQRRGMLQWYGDFIDG  388
            H A+ LE+RR MLQW +DF+D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

381) YPTB3886 in NC_006155


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  234 bits (872),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 244/382 (64%), Gaps = 25/382 (6%)

Query  26   MYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVSLADARQKRDEARKVLAAGGDPGEVK  85
            M+LLV PNGS+YWRL+YR++GKEK L++GVYP+VSL++AR KRDEARK+++ G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKLAQKLSSENTFEAIAREWHKQKADRWSLRYRDEIIDTFEKDIFPYLGRRPIAEIKP  145
            +A K+   L  + +FE IAR WH     +W+    D ++ ++E ++FP++G R I+ ++ 
Sbjct  61   RAKKVVPDL--QLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  MelletlrrlekrGALEKMRKVRQRCGEVFRYAIVTGRAEYNpapdlatalatpKKTHFP  205
             +LL  +R  E +   E   +++QR + V RYA+ +G   YNPA D+A AL+T K+ H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGVRTQELRFARWEDIDFEKRLWEIPSE  265
             L    LP ++  +++Y G  +T+ A  + +   +R+ ELR+ARW +ID+++ +W IP+E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  ------------VIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFIGRNDRAKPISKES  313
                          KM+ PH+VPLS QVV ++  L+  +G   L+F G +D  KPIS ++
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN+ + ++GY     + GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AHYLEGRREMMQWYGDNLES  388
            H A+ LE RR M+QW +D L++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

382) YPTS_4103 in NC_010634


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  234 bits (872),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 244/382 (64%), Gaps = 25/382 (6%)

Query  26   MYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVSLADARQKRDEARKVLAAGGDPGEVK  85
            M+LLV PNGS+YWRL+YR++GKEK L++GVYP+VSL++AR KRDEARK+++ G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KADKLAQKLSSENTFEAIAREWHKQKADRWSLRYRDEIIDTFEKDIFPYLGRRPIAEIKP  145
            +A K+   L  + +FE IAR WH     +W+    D ++ ++E ++FP++G R I+ ++ 
Sbjct  61   RAKKVVPDL--QLSFEHIARRWH-ASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  MelletlrrlekrGALEKMRKVRQRCGEVFRYAIVTGRAEYNpapdlatalatpKKTHFP  205
             +LL  +R  E +   E   +++QR + V RYA+ +G   YNPA D+A AL+T K+ H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGVRTQELRFARWEDIDFEKRLWEIPSE  265
             L    LP ++  +++Y G  +T+ A  + +   +R+ ELR+ARW +ID+++ +W IP+E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  ------------VIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFIGRNDRAKPISKES  313
                          KM+ PH+VPLS QVV ++  L+  +G   L+F G +D  KPIS ++
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN+ + ++GY     + GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AHYLEGRREMMQWYGDNLES  388
            H A+ LE RR M+QW +D L++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

383) BCAL2961 in NC_011000


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  234 bits (871),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 164/380 (44%), Positives = 252/380 (67%), Gaps = 13/380 (3%)

Query  26   LFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPDVTlaaarrkrdeareklaaGIDPGEAK  85
            +FLLV P G RYWRL+YR  GKEK LALGVYP+V+L+ AR KRDEAR  ++ G+DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAEKRTARLSAENSFEAVAREWHIKYAPTWSESHGSRILRRLEVDAFPWIGSKPIAELAP  145
            +A K  + L  + SFE +AR WH      W++SH+ ++L+ LE + FP IG++ I+ L  
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PDVLEVLRRVEKRGALETAHRLHANVSQVCRYAVATGRAQRDVTADLRGALPPVQQEHMA  205
            PD+L  +R  E +   E A RL+  +S V RYAV +G  + + + D+ GAL  V+++H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  AVTDPKQVAELLRSIDGYQGTFPVLCALRLFPLLFQRPGELRAAEWSEFDLDASTWEIPS  265
            A+ D  +++ELL  I++Y+G      A+ L  L+F R++ELR A WSE+D+D + W IP+
Sbjct  178  AL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  ER-----MKRTKQGKASGGAHIVPLSAQAVAILRDLHALTGNSRFLFPSVRTKDRPMSDN  320
            ER     +K + +G     +H+VPLS Q VAIL +L++ +G++ ++F + +   +P+S+N
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  321  TINGALRRLGYD-GDTMTGHGFRAMARTILDEVLGV-PVAIVEAQLAHAVKDPLGRAY-N  377
            T+N ALR +GYD  + + GHGFRAMA + L E  G+ +   VE Q++H  ++ +  AY +
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIES-GLWSRDAVERQMSHQERNGVRAAYIH  355

Query  378  RTAHLPQRREMMQRWADYLD  397
            ++ HL +RR M+Q+WAD+LD
Sbjct  356  KAEHLEERRLMLQWWADFLD  375

384) Rfer_1354 in NC_007908


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  232 bits (864),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 241/384 (63%), Gaps = 27/384 (7%)

Query  26   LYLLVNPVGSKLWRWKYRFLGKEKVMSLGAYPDVSLAQARDGMGAARKLLASGTDPMAQR  85
            ++LLV+P GS+ WR +YR+LGKEK ++LG YP+VSL++AR   + ARKL++ G DP  Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   ATDKITKQASAENSFQSVALLWWDHWHGAK---SARHADDVMRRLKADVFPAIGARPVSE  142
             + K+   +  + SF+ +A     +WH+++   +  H+D V++ L ++VFP IG R ++ 
Sbjct  61   RAKKVV--PDLQLSFEHIA----RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITT  114

Query  143  IQAHELVGMVQTISKRGALDIAKRALQTSGQVFRYAVAHGLAQRNPASDIKPSDVLASRK  202
            +++ +L+  V++   +   +IA R  Q  + V RYAV  G+ + NPA D+  ++ L++ K
Sbjct  115  LNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDM--AGALTTVK  172

Query  203  AANYARISAKELPELLRHIEGYAGAAVTRLAMKLMALTFVRTSELIGARWAEFDLEARRW  262
              + + +    LPELL +I +Y G +VT+LA+ L  L F+R+SEL  ARW+E+D++   W
Sbjct  173  RQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMW  232

Query  263  DIPASR------------MKMKTPHIVPLSTQAVNVLQTLQLVSGRGTLLFPGERDHEKS  310
             IPA R             KM+TPH+VPLS Q V +L  LQ  +G   L+F G +D  K+
Sbjct  233  TIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKP  292

Query  311  MSNNTILGALDRMGYKGR--MTGHGFRGVASTLLHEMGF-DHAHIELQLAHQERNEVSAA  367
            +S+NT+  AL  MGY     + GHGFR++A + L E G+  +  +E Q++HQERN V AA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  368  YNH-ATYLKQRTKMMQHWADYLDS  390
            Y H A  L +R  M+Q WAD+LD+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDA  376

385) RSc0968 in NC_003295


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  231 bits (863),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 169/378 (45%), Positives = 246/378 (66%), Gaps = 20/378 (5%)

Query  26   MYLEVMPNGSKYWRLKYRIAGKEKRLALGVYPSVGlaqartarddarrliaaGTDPSQAR  85
            M+L V PNGS+YWRL+YRI GKEK LALGVYP V+L++ART RD+AR+LI+ G DP + +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KEAKLATTTARTHTFEVVAREWHEKQSATWVPTYATKVLHSLETDIFPDLGARPITEITA  145
            +  K+        +FE +AR WH  +   W  + + KVL SLET++FP +G R IT + +
Sbjct  61   RAKKVVPDLQ--LSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PQMLATLRKVESRDALETVARLQQRCSAVFRYAVVTGRAAHNPCTDLKGAFKTAKVQHMA  205
            P++L  +R  E+++  E  +RLQQR SAV RYAV +G    NP  D+ GA+ T K QH +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  RVQANEVPTLIKNIRGYDGDLITRIALQFMALTFVRTKELIGAQWSEIDFETEEWRIPAE  265
             ++ + +P L+  I +Y G+ +T++A+ +  L F+R+ EL  A+WSEID++   W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMREPHFVPLSWQAIALLRAAEKMTGNRQYVFQSPKG-RTHISNNT  312
            R             KMR PH+VPLS Q +A+L   +  +G+   +F ++ + R  IS+NT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  313  ILYALYRLGYHSR--MTGHGFRGLASTMLHEQGF-NPDVIERQLAHAERNKVRAAYNH-A  368
            +  AL  +GY++   + GHGFR++A + L E G+ + D +ERQ++H ERN VRAAY H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  369  QYLPERRRMMQHWADHLD  386
            + L ERR M+Q WAD LD
Sbjct  358  EHLEERRLMLQWWADFLD  375

386) BTI_1100 in NC_021173


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  231 bits (861),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 156/380 (42%), Positives = 247/380 (65%), Gaps = 13/380 (3%)

Query  26   LYLEIAPSGGKWWRLKYRFGGKEKRISLGVYPDVPLKEARERHDKARALLDGGADPGeak  85
            ++L + P+G++ WRL+YR+ GKEK ++LGVYP+V+L EAR ++D AR L+  G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kaekraarLSTENSFEAVAREWHAKYAPSWSASHGARLLRRLEVDAFPWIGGKPIAELAP  145
            +A K  + L  + SFE +AR WHA     W+ SH+ ++L+ LE + FP IG + I+ L  
Sbjct  61   RAKKVVPDL--QLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PDVLDVLRRVEKRGALETAHRLHANVGQVCRYAVATGRAARDVTADLRGALPPVQQEHMA  205
            PD+L  +R  E +   E A RL+  ++ V RYAV +G    + + D+ GAL  V+++H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  AITDPKQVAELLRAIDGYQGTLPVSCALRLAPLLFQRPGELRAAEWAEFDLDAGTWEIPS  265
            A+ D  +++ELL  I++Y+G      A+ L  L+F R++ELR A W+E+D+D + W IP+
Sbjct  178  AL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  DR-----MKRTKQGKAAGGAHIVPLPLQAVAILRELQLLTGNGRLLFPSVRTKDRPMSDN  320
            +R     +K + +G     +H+VPL+ Q VAIL ELQ  +G+  L+F + +   +P+S+N
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  321  TVNAALRRLGYD-GDTMTGHGFRAMARTILDEVLGV-PAPIIEAQLAHTVKDPLGRAY-N  377
            TVN ALR +GYD  + + GHGFRAMA + L E  G+ +   +E Q++H  ++ +  AY +
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIES-GLWSRDAVERQMSHQERNGVRAAYIH  355

Query  378  RTAHLQQRREMMQKWADYLD  397
            ++ HL++RR M+Q WAD+LD
Sbjct  356  KAEHLEERRLMLQWWADFLD  375

387) Fraau_1988 in NC_017033


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  231 bits (860),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 158/381 (42%), Positives = 253/381 (67%), Gaps = 20/381 (5%)

Query  26   MYLEVMPNGSRYWRLKYRFGGKEKRLALGVYPGISladarkrredarrlladGIDPGAAR  85
            M+L V PNGSRYWRL+YR+ GKEK LALGVYP +SL++AR +R++AR+L+++G+DP   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KEAKQEATAEAGGAVTFEQVARQWLARQDV-AEVTANKNQWLLEEYLFPSIGQRPIADIT  144
            +  K  +  +    ++FE++AR+W A +   A+  ++K    LE  +FP IG+R I+ + 
Sbjct  61   RAKKVVPDLQ----LSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  145  PRELLAALRETEDKGLLETARRSKIKAGQVFRYAIIEGLCEADPMASLRGALKTTRNRHH  204
              +LL ++R +E K + E A R + + + V RYA+  G+   +P   + GAL T + +H+
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  205  AAITDPVQIGGLMRAMDGFAGTFTVRCALLLSALLFVRPGELRKAEWAEMDLDGAMWRIP  264
            +A+ D  ++  L+  ++++ G    + A++L+ L+F+R++ELR A W+E+D+D AMW IP
Sbjct  177  PAL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  265  GEK------------MKMGAPHLVPLSEQALAILRDLHGLTGHARYVFSGLRTDSRPMSE  312
            +E+             KM +PHLVPLS Q +AIL +L+  +G+   +F+G +   +P+SE
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISE  295

Query  313  NTVNTALRALGYDKA-TMTAHGFRSMAATRLNEMG-WNADAIERQLAHAESNKVRDAYTS  370
            NTVN ALR +GYD +  + +HGFR+MA + L E G W+ DA+ERQ++H E N VR AY  
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  371  QAQYLPERQKMMQAWADYLDS  391
            +A+ L ER+ M+Q WAD+LD+
Sbjct  356  KAEHLEERRLMLQWWADFLDA  376

388) Reut_A2365 in NC_007347


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 257/386 (67%), Gaps = 26/386 (6%)

Query  31   LYLEVMTDGRKLWRFKYVRPSGSESRLGFGVYPAVSLAQARTQRETARGIVADGRDPGAV  90
            ++L V  +G + WR++Y R  G E  L++GVYP VSL++ART+R+ AR ++++G DP   
Sbjct  1    MFLLVHPNGSRYWRLRY-RILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPC--  57

Query  91   KQEERRAARIAAGN--SFEAVARDWHNTQKSSWNDVYAGKVLASLENDVFPVLGSTPIAD  148
              E++RA ++ ++   SFE +AR WH ++K  W +  ++KVL SLE +VFP +G+  I+ 
Sbjct  58   --EQKRAKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITT  114

Query  149  IKAPAILDLLRKVEARGVRDTTKRILQRMRAVFQYGIIYGLCDRNPAADIDSAAALKSES  208
            +++P +L  +R  EA+ + + + R+ QR+ AV +Y++  G+   NPA  +D A+AL +  
Sbjct  115  LNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPA--LDMAGALTTVK  172

Query  209  VQHQARVSPLELPQLLRDIDAYEGDAVTRLALQFMTLTFVRTTEMIQARWVEIDEAKAEW  268
             QH++ +    LP+LL  I++Y G++VT+LA+ +  L F+R++E+  ARW EID  +A W
Sbjct  173  RQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMW  232

Query  269  RIPADR------------MKMRDPHVVPLSTQALAVLAELRAINGHRDLVFYSPRGKSGH  316
             IPA+R             KMR PH+VPLS Q +A+LAEL++  G+ +L+F ++++    
Sbjct  233  TIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKP  292

Query  317  ISNNTMLYALYRMGYHSR--MTGHGFRGLASTALNELGFRP-DVIERQLAHVERNKVRAA  373
            IS+NT+  AL  MGY++   + GHGFR++A +AL E G+++ D +ERQ++H ERN VRAA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  374  YNH-AQYLPERRQMMQSWADHVHALR  398
            Y H A+ L ERR M+Q WAD ++A R
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANR  378

389) Despr_0274 in NC_014972


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  229 bits (853),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 162/380 (43%), Positives = 251/380 (67%), Gaps = 14/380 (3%)

Query  25   LYLLVKSTG-KYFRFNYRFQDKQKTLALGVYPDVSlagarerlaearkliaDGIDPGEQR  83
            ++LLV + G +Y R+ YR+ +K+KTLALGVYP+VSL+ AR +  EARKLI++G+DP EQ+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  84   KMDKEAATNLNSVEAVAREWFLKNKHTWTDNHARDIITRLEANVFPWLGRTPIADVTAPM  143
            +  K  +    S E +AR W   NK+ W+++H+  ++  LE++VFP +G   I+ + +P 
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  144  LLAVLRRIEDRGAIETAHRIKQMCGQVFRYAVATGRAERDPSADLRGALPPPPSKSMATI  203
            LL  +R  E +   E A R++Q  + V RYAV +G    +P+ D+ GAL     +  +++
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL  179

Query  204  TDPKGVSALLRAIRGYKGEIITRCALRLAPLTFVRPGELRHAEWADIDLDRAEWKIPPEK  263
              ++ ++ LL  I +YKG+ +T+ A+ L  L F+R++ELR A W++ID+D A W IP+E+
Sbjct  180  DLSR-LPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  264  RKL------KKALKAIPQNFHFVPLSRQALAVLRELQPLTGEGRYVFPSLRTGERPMSEN  317
              L       ++ K      H+VPLS+Q +A+L ELQ  +GE   +F + +   +P+SEN
Sbjct  239  EPLPGVKFSHRGSKMRTP--HLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  318  TVNAALRRMGY-AKDEMTGHGFRAMASTLLHEQG-WPSDVIERQLAHKERNSVKAAYNY-  374
            TVN ALR MGY + +++ GHGFRAMA + L E G W+ D +ERQ++H+ERN+V+AAY   
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  375  AQHIPERRKMMQAWADYLDA  394
            A+H+ ERR M+Q WAD+LDA
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

390) YPK_0061 in NC_010465


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  229 bits (853),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 245/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVSLAQarekreaakkllSAGSDPGELK  85
            ++L V  NGSRYWRL+YR  GKEK LA+GVYPEVSL++AR KR+ A+KL+S G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAEKIAQKLNYENTFEAIAREWHQLRADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            +A K+   L+   +FE IAR WH     +W+    D ++ ++E ++FP+IG+R I+ ++ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELLETLRKMEKRGALEKMRKVRQRCGEVYRYAIITGRAEYNpapdlataltppKKQHFP  205
             +LL  +R  E +   E   +++QR + V RYA+ +G   YNPA D+A ALT  K+QH P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLTAEELPYFLKNLAGYTGSVitktatkiilltaVRTQELRFTRWQDIDLEKGIWEIPAE  265
             L    LP +L  +++Y G  +T+ A  + LL  +R+ ELR++RW +ID+++++W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  ------------VMKMKRPHVVPLSKQVIELFNSLKPLSGHYELVFIGRNDHRKPISKES  313
                          KM+ PH+VPLSKQV+ ++  L+  +G+  L+F G +D RKPIS ++
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEKGYNSAW----IETQLAHIDKNAIRGTYN  367
            VN+ + ++GY     + GHGFR    + L E G    W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYMDGRREMMQWYADYLDA  388
            H A+ ++ RR M+QW AD+LDA
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

391) Alide2_0433 in NC_015422


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  228 bits (848),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 155/384 (41%), Positives = 247/384 (65%), Gaps = 12/384 (3%)

Query  26   LYVRVDAKGAMRWQWRIRTPRGENIVSYGVYPEVSLAEARQRHSEARRQVRDGVNPNeak  85
            +++ V+++G+  W+ R R    E+ ++ GVYPEVSL+EAR ++ EAR+ + +GV+P E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   rakkeevaakTINSFEAVTREWFAHRKDEWAPSYGEKIMRRMEVDVFPYVGGKSISEITP  145
            RAKK     +   SFE ++R W A  K +WA S ++K+++ +E +VFP++G + I+ +  
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PELLEVLRRIEKRGAIETAHRALENCGQVFRYGVATGRIPSDPSRDLKGALRKPMVKHMA  205
            P+LL  +R  E +   E A R  +  + V RY+V +G I  +P+ D+ GAL     +H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  AITDPADLAALLRAIDGYAGTHVVRCALKLAPMLMLRPGELRMARWEEFDLDAATWTIPP  265
            A+ D + L+ LL  I++Y G  V + A+ L  ++ +R++ELR ARW E+D+D A WTIP+
Sbjct  178  AL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  ER-----MK-RQRAGKMNGDPHMVPLPRQAVEVLRDLHPLTGPTGLVFRGERDHERPMSE  319
            ER     +K  +R++KM   PH+VPL++Q V +L +L+  +G  GL+F G +D  +P+SE
Sbjct  237  EREPLPGVKFSHRGSKMRT-PHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISE  295

Query  320  NTVNASLRRMGYDTQTQVTGHGFRATARTILDEHMGYDRAVIEAQLAHSVADSLGRAY-N  378
            NTVN +LR MGYDT  +V GHGFRA A + L E     R  +E Q++H   +++  AY +
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  379  RTEFLKQRREMLQAWADYLEGLRA  402
            ++E L +RR MLQ WAD+L++ R 
Sbjct  356  KAEHLEERRLMLQWWADFLDANRE  379

392) M301_2114 in NC_014207


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  227 bits (846),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 249/382 (66%), Gaps = 21/382 (5%)

Query  32   LYLLVQANGSRLWRLDYRFDGLRKTFAIGSYPDVSLAQAREQRDSARKLLSNDPPIDPNE  91
            ++LLV++NGSR WRL YR+ G  KT+A+G YP+VSL++AR +RD ARKL+S++  +DP E
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEG--VDPCE  58

Query  92   NRKAIKATKKLGAENSFEVVAREWWLSHMKGKADSHKEKVIRRFELYLFPWIGRKPIAEI  151
            +++A K    L  + SFE +AR W  +  K  A+SH +KV++ +E  +FP IG + I+ +
Sbjct  59   QKRAKKVVPDL--QLSFEHIARRW-HASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTL  115

Query  152  TAPQVLEAIKRIEKLNILETAHRTLQTAGQVFRYAVQTGRAIRDVTADLKGALPATTVKH  211
             +P++L +++  E  +I E A R  Q  + V RYAVQ+G    + + D+ GAL +   +H
Sbjct  116  NTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQH  175

Query  212  MASFTEPKDVAELLRAIEGFAGTFTVQCALRLSPLVFARPSELRMAKWSDIDLDTGIWQY  271
             +++  ++ ++ELL  I ++ G    Q A+ L+ LVF R+SELR A+WS+ID+D ++W  
Sbjct  176  RPALDLSR-LPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTI  234

Query  272  LV--------------SKTKTDHLVPLSTQAVAILRELHPLSGHGKYVFMGGHSPLKPMS  317
                            SK +T HLVPLS Q VAIL EL+  +G+   +F G+H P KP+S
Sbjct  235  PAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPIS  294

Query  318  ESAVNAALKRMGYDTQKDITAHGFRAMARTILHERLNIDPHIIEHQLAHRVPDNLGGAY-  376
            E++VN AL+ MGYDT +D+ +HGFRAMA + L E      + +E+Q++H+  + + +AY 
Sbjct  295  ENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYI  354

Query  377  NRTRFIDQRKVMMQQWADYLDE  398
            +++  +++R++M+Q WAD+LD 
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

393) XALc_1804 in NC_013722


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  226 bits (841),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 168/383 (44%), Positives = 249/383 (66%), Gaps = 23/383 (6%)

Query  26   LYLLMRPDGARWWRWDYRRPNTGKRNTLSLGTYPDTGladardkrdaarkllaaGVDPGE  85
            ++LL++P+G+R WR  YR    GK +TL+LG YP+ +L++AR KRD ARKL++ GVDP E
Sbjct  1    MFLLVHPNGSRYWRLRYR--ILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   QRKRAKEQAAMVAPAGETFETVAREWMARQTV-ARVTAEKNRWLLETFLFPEIGSRPIGE  144
            Q++  K    +V+    +FE +AR W A +   A+  ++K    LET +FP IG+R I  
Sbjct  59   QKRAKK----VVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITT  114

Query  145  ITPRELLDALRKIEATGKLETAGRAKIKAGQVFRYAMLEGKAEIDPTASLRGALKTVKAR  204
            +   +LL ++R  EA    E A+R + + + V RYA+  G    +P+  + GAL TVK R
Sbjct  115  LNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVK-R  173

Query  205  HHASITDPVKIGQLLRAIEGFIGQPVTHAALKLAPLVFVRPGELRAAEWGEIDLDAAMWR  264
            +H +  D  ++ +LL  I ++ GQPVT+ A+ L  LVF+R++ELR A W+EID+D AMW 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  265  IRPER------------MKMKAAHLVPLSSQAVAILRDLHALTGGGPHVFPGLR-PNRPM  311
            I +ER             KM+++HLVPLS Q VAIL +L++ +G    +F G + P +P+
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  312  SENTINAALRGLGY-ASDEMTGHGFRSMAATRLNEMG-WNPDAIERQLAHAETNKVREAY  369
            SENT+N ALR +GY +++++ GHGFR+MA + L E G W+ DA+ERQ++H E N VR AY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  370  THAAQYLPERIRMMQAWADYLDG  392
             H A+ L ER  M+Q WAD+LD+
Sbjct  354  IHKAEHLEERRLMLQWWADFLDA  376

394) Dsui_1791 in NC_016616


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  226 bits (842),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 163/389 (42%), Positives = 256/389 (66%), Gaps = 22/389 (5%)

Query  26   LFLLVNPNGSKYWRVKYRFLGKEKLLALGVYPEVSLKQarerrddarrllaNGVDPGFHK  85
            +FLLV+PNGS+YWR++YR+LGKEK LALGVYPEVSL +AR +RD+AR+L+++GVDP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QATKMAMVANAANSFEAVAREWWAKKSVGWSASYSNKVIRLFERDVFPWVGARPIADITA  145
            +A K  +V++   SFE +AR W A +   W+ S S+KV++ +E +VFP +G R I+ + +
Sbjct  61   RAKK--VVPDLQLSFEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PEMLAVVRRIEARGVIE-TAHLALRVSGQAFRYAVVTGRAERSPVGDLRGALPPVKVSHF  204
            P++L  VR  EA+ + E +++L  R+S+   RYAV +G    +P  D+ GAL  VK  H 
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISA-VMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  205  AAITEPEKVGELLRAIDAFSGTFVVLCALKLAPLFFVRPGELRHARWRDFDLERGEWRYL  264
            +A+ +  ++ ELL  I+++ G  V   A+ L  L F+R++ELR ARW ++D++ + W   
Sbjct  177  PAL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  265  V--------------TKTQTQHLVPLATQAIGILRELYALTGRGDFVFPG-RDRANPMSG  309
                           +K +T HLVPL+ Q ++IL EL + +G  +++F G +D  +P+S 
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISE  295

Query  310  ATINAALRRMGYNTQTDITGHGFRAMARTILAEELHVKPEVIEHQLAHRVPDNLGTAY-N  368
             T+N ALR MGY+T  D+ GHGFRAMA + L E      + +E+Q++H+  + + +AY +
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  369  RTKFLKERRVMMQEWANYLDNLKENVISP  397
            ++  L ERR+M+Q WA++LD  +E  ISP
Sbjct  356  KAEHLEERRLMLQWWADFLDANRERFISP  384

395) PSPTO_5344 in NC_004578


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  226 bits (841),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 156/377 (42%), Positives = 242/377 (65%), Gaps = 19/377 (5%)

Query  28   LEIAPSGSKLWRYRYRFNGKAKMLALGAYPAVTLLKARQLRDSARQLLVEGNDPGEHKKT  87
            L + P+GS+ WR RYR+ GK K LALG YP V+L  AR  RD AR+L+ EG DP E+K++
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   AQQAQKVEGLTFETLAREWFAYNSPRWAESTTYKAKLYMENDLIPGIGARPVKALTRPDL  147
             +    ++ L+FE +AR W A ++ +WA+S + K    +E +++P IG R + +L  PDL
Sbjct  63   KKVVPDLQ-LSFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  148  VDLVRKVEARGTLNAAGKIRQWLHQIFRYGLAKGVVESNPATDLDVVAAPQKAPRHHPHV  207
            +  VR  EA+   + A++++Q++  + RY++  G++  NPA D+    +  K  +H+P +
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVK-RQHRPAL  179

Query  208  PFSELPELLEICDGSKINTLTRCAIHLLVLTAVRPGELRNAPWSEFDLDAATWAIPKER-  266
             +S LPELL   ++ K + +T+ A+ L +L  +R++ELR A WSE+D+D A W+IP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  267  -----------MKARRPHVVPLPTQAVDILRQLQPITGRYPLVFAGQHNPSRPMSENTIN  315
                        K R PH+VPL+ Q V IL +LQ  +G   L+F+G H+P +P+SENT+N
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  316  KALRLLGYENRQT--GHGFRHLLSTELNGRGY-NKDWIERQLAHGDADGIRDTYNH-ASY  371
            KALR++GY+  Q   GHGFR +  + L   G  ++D +ERQ++H + +G+R +Y H A  
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  372  LEQRRGMMQAWADSIDA  388
            LE+RR M+Q WAD +DA
Sbjct  360  LEERRLMLQWWADFLDA  376

396) CSSP291_04405 in NC_020260


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  226 bits (841),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 155/384 (41%), Positives = 248/384 (65%), Gaps = 25/384 (6%)

Query  26   LYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDISLAEARTKRDEARKTLANDKDPGEVK  85
            ++L+V+ NGS+YWR++YR+ GKEK L++G YP++SL+EARTKRDEARK ++++ DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYADYVNRAFKNNVFPFVGSQPVNEIKP  145
            +A  +   L ++  FE IA  W  ++   W+++ +D V +++  +VFPF+G++ +  ++ 
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIVTGRAEYNPAADLGSALQGYEKQHYP  205
             +LL  ++  E +   E+AS+++QR S V RYA+ +G   YNPA D+++AL    +QH P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLTAAELPEFLQKLSQYTGSlvtllatrllmltglrtvELRMAEWSEIDFENHIWEIPKS  265
             L  + LPE+L +++ Y G  VT LA  L +L  +R+ ELR A WSEID++N +W IP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFAGRNDVNKPMSEAS  313
            R             KMR PH+VPLS Q +A L +L+  +G   +IF+G +D  KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INMVIKRIGYDKR--ATGHGFRHTMSTILHEEGFNTAW----IETQLAHVDKNAIRGTYN  367
            +N  ++ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLEGRKEMMQWYGDYLDGLR  390
            H A+ LE R+ M+QW +D+LD+ R
Sbjct  355  HKAEHLEERRLMLQWWADFLDANR  378

397) ECL_03688 in NC_014121


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  226 bits (841),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 155/384 (41%), Positives = 248/384 (65%), Gaps = 25/384 (6%)

Query  26   LYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDISLAEARTKRDEARKTLANDKDPGEVK  85
            ++L+V+ NGS+YWR++YR+ GKEK L++G YP++SL+EARTKRDEARK ++++ DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYADYVNRAFKNNVFPFVGSQPVNEIKP  145
            +A  +   L ++  FE IA  W  ++   W+++ +D V +++  +VFPF+G++ +  ++ 
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  LELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIVTGRAEYNPAADLGSALQGYEKQHYP  205
             +LL  ++  E +   E+AS+++QR S V RYA+ +G   YNPA D+++AL    +QH P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLTAAELPEFLQKLSQYTGSlvtllatrllmltglrtvELRMAEWSEIDFENHIWEIPKS  265
             L  + LPE+L +++ Y G  VT LA  L +L  +R+ ELR A WSEID++N +W IP  
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFAGRNDVNKPMSEAS  313
            R             KMR PH+VPLS Q +A L +L+  +G   +IF+G +D  KP+SE +
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INMVIKRIGYDKR--ATGHGFRHTMSTILHEEGFNTAW----IETQLAHVDKNAIRGTYN  367
            +N  ++ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLEGRKEMMQWYGDYLDGLR  390
            H A+ LE R+ M+QW +D+LD+ R
Sbjct  355  HKAEHLEERRLMLQWWADFLDANR  378

398) Mpe_A1087 in NC_008825


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  225 bits (838),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 163/396 (42%), Positives = 252/396 (64%), Gaps = 21/396 (5%)

Query  23   LYLEVTAAGGRYWRMKYRHGGKEKRLAFGVYPEVTLraardrrdearrVLDQGGDPGELR  82
            ++L V + G+RYWR++YR  GKEK LA+GVYPEV+L  AR +RDEAR+++ +G DP E +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  83   KaakaqaaheaSNTFEAVARDWLTHQADSWEAVTLARIKAAFKADVFPQLGARPMAQIKP  142
            +A K  +  + S  FE +AR W + + + W      ++  ++ ++VFP +G R ++ ++ 
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  143  REVATVVKAIEARGAGDMAARVLQRIRAVFRFAVVHERIDSNPMLDLQPGELLKPRQVRH  202
             ++   V+A EA+   ++A+R+ QRI AV R+AV    I  NP LD+ +G L   ++ +H
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDM-AGALTTVKR-QH  175

Query  203  RAALADRDLPVFLEKLAAYDGDVSTSAALRLLMLTAVRPGELRGARWDEIDMDAAEWRIP  262
            R+AL    LP +L ++++Y G+  T  A+ L +L  +R++ELR ARW EID+D A W IP
Sbjct  176  RPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIP  235

Query  263  AER------------MKMRSPHVVPLSRQALDVLQLMQPLSGERELVFPSPYYPGKPLSE  310
            AER             KMR+PH+VPLS+Q + +L  +Q  +GE  L+F ++  P KP+SE
Sbjct  236  AEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISE  295

Query  311  NTLNSALARMGYKGL--ATAHGFRALFSTVANESGH-SPDVIERQLAHVERNAVRAAY-H  366
            NT+N AL  MGY       +HGFRA+  +   ESG  S D +ERQ++H ERN+VRAAY H
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  367  RSTYLKDRAQLMQWWADYLDGRRSGKVVPLSSARVA  402
            ++  L +R  ++QWWAD+LD+ R   + P+  A++ 
Sbjct  356  KAEHLEERRLMLQWWADFLDANRERFISPFEYAKIN  391

399) ELI_09990 in NC_007722


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  225 bits (838),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 157/390 (41%), Positives = 254/390 (66%), Gaps = 29/390 (7%)

Query  26   LFLLVERTGGKLWRMKYRIDGREKKLAIGRYPEIGlaearrrrdaareqlaqGKDPSREK  85
            +FLLV+  G++ WR++YRI G+EK LA+G YPE++L+EAR +RD AR  +++G DP  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   QRQKARAKLGAENNFASLAAEFCEKRKHDGSRAWAPATAKRCEYLLSVLNSS----IGHL  141
            + +K  + L  + +F  +A     +R H +++ WA + + +   +L  L++     IG+ 
Sbjct  61   RAKKVVPDL--QLSFEHIA-----RRWHASNKQWAQSHSDK---VLKSLETHVFPFIGNR  110

Query  142  PIADIEPADILTAVRRIESKGKLESAKRTLQLAGSVFRYAVATARLKSDPTRDLRGALMN  201
             I+ ++ +D+L +VR  E+K   E A R  Q  ++V RYAV ++ ++ +P+ D+ GAL  
Sbjct  111  DITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTT  170

Query  202  PTVTHYGAVLDPAGAGELLRAIDGYEGQPITKLAMQLAPHVFVRPGELRHAEWSEIDFDE  261
                H  + LD +   ELL  I++Y GQP+T+LA+ L   VF+R++ELR A WSEID+D+
Sbjct  171  VKRQH-RPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDN  229

Query  262  ALWTIPASK------------TKMRKDHLVPLSRQAIAILEMAHRLTGPDGYVFPSVRTR  309
            A+WTIPA +            +KMR  HLVPLS+Q +AIL   +  +G +G +F + +  
Sbjct  230  AMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDP  289

Query  310  KRPMSDNTINAGLRRLGY-ATDEMTAHGFRAMASTLLNESGKWNPDAIEGALAHGDSDKV  368
            ++P+S+NT+N +LR +GY +T+++ +HGFRAMA + L ESG W+ DA+E  ++H + + V
Sbjct  290  RKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGV  349

Query  369  RAAY-HRGAHWKERVKMMKWWSDYLDQLRE  397
            RAAY H++ H  ER  M++WW+D+LD  RE
Sbjct  350  RAAYIHKAEHLEERRLMLQWWADFLDANRE  379

400) P12B_c3788 in NC_017663


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  223 bits (830),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 156/383 (41%), Positives = 244/383 (64%), Gaps = 25/383 (6%)

Query  26   LYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVSlaearekreaakkllSAGSDPGELK  85
            ++L V  NGSRYWRL+YR  GKEK LA+GVYPEVSL+EAR KR+ A+KL+S G DP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAEKIAQKLNYKNTFEAIAREWHQLRADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            +A K+   L+   +FE IAR WH     +W+    D ++ ++E ++FP+IG+R I+ ++ 
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  MELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIVTGRAEYNpapdlatalatpKKTHFP  205
             +LL  +R  E +   E   +++QR + V R A+ +G   YNPA D+A AL+T K+ H P
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  FLTAEELPHFLRDLAGYTGSVITKTATQIIMLTGVRTQELRFARWEDINFEKRLWEIPAE  265
             L    LP++L  +++Y G  +T+ A  + +L  +R+ ELR+ARW +I++++ +W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  ------------VMKMKRPHIVPMSDQVVQLFGSLKPITGLNPLVFVGRNDRTKPISKES  313
                          KM+ PH+VP+S QVV +++ L+  +G N L+F G +D  KPIS ++
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEEGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN+ + ++GY     + GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354

Query  368  H-AQYLEGRREMMQWYADYITSN  389
            H A+ LE RR M+QW AD++ +N
Sbjct  355  HKAEHLEERRLMLQWWADFLDAN  377

401) XALc_1632 in NC_013722


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  221 bits (823),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 167/381 (44%), Positives = 245/381 (65%), Gaps = 23/381 (6%)

Query  1    MRPDGARWWRWDYRRPNTGKRNTLSLGTYPDTGladardkrdaarkllaaGVDPGEQRKR  60
            ++P+G+R WR  YR    GK +TL+LG YP+ +L++AR KRD ARKL++ GVDP EQ++ 
Sbjct  5    VHPNGSRYWRLRYR--ILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  61   AKEQAAMVAPAGETFETVARAWMARQTV-ARVTAEKNRWLLETFLFPEIGSRPIGEITPR  119
             K    +V+    +FE +AR W A +   A+  ++K    LET +FP IG+R I  +   
Sbjct  63   KK----VVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  120  ELLDALRKIEATGKLETAGRAKIKAGQVFRYAMLEGKAEIDPTASLRGALKTVKARHHAA  179
            +LL ++R  EA    E A+R + + + V RYA+  G    +P+  + GAL TVK R+H +
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVK-RQHRP  177

Query  180  VTDPVKIGQLLRAIEGFIGQPVTHAALKLAPLVFVRPGELRAAEWGEIDLDAAMWRIRPE  239
              D  ++ +LL  I ++ GQPVT+ A+ L  LVF+R++ELR A W+EID+D AMW I +E
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  240  R------------MKMKAAHLVPLSSQAVAILRDLHALTGGGPHVFPGLR-PNRPMSENT  286
            R             KM+++HLVPLS Q VAIL +L++ +G    +F G + P +P+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  287  INSALRALGY-SGDEMTGHGFRSMAATRLNEMG-WNADAIERQLAHAETNKVREAYTHAA  344
            +N ALR +GY + +++ GHGFR+MA + L E G W+ DA+ERQ++H E N VR AY H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  345  QYLPERVRMMQAWADYLDSLR  365
            + L ER  M+Q WAD+LD+ R
Sbjct  358  EHLEERRLMLQWWADFLDANR  378

402) Xaut_3444 in NC_009720


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 158/388 (41%), Positives = 250/388 (65%), Gaps = 30/388 (7%)

Query  26   LYLLVNPDGARYWRLNYRFAGKQKTLALGTYPITSLADARKGRETAKEQLAARIDPSear  85
            ++LLV+P+G+RYWRL YR+ GK+KTLALG YP  SL++AR  R+ A+  ++  +DP E +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   raekraarLHSSRIFEVVAQEWFAAKLPGWVPSYSDRLLSRLEADIYPTLGHRPIADIEP  145
            RA K  + L+ S  FE +A+ W A++   W  S SD++L  LE++++P +G+R I+ ++ 
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASN-KQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PEVLEVIRKVETRGAIELAKREMQVIGQIFHFAIASGRAKRDPTQDLRGALKSPGRQKHH  205
            P++L  +R  E++   E+A R  Q I+ + ++A+ SG  + +P+ D+ GAL +  RQ H+
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQ-HR  176

Query  206  RALPREDLPDFLKALDAYDGEPMTKLALKLMVLTFVRTTELRAARWSEFEGLDGPEPLWR  265
             AL    LP++L  +++Y G+P+T+LA+ L +L F+R++ELR ARWSE   +D  +++W 
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSE---IDIDNAMWT  233

Query  266  IPPER------------MKMRFEHLVPLSPQAVAVLQELRPLAGRSPQLFPSPSKE-GFM  312
            IP+ER             KMR  HLVPLS Q VA+L EL+  AG +  +F ++      +
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  313  SNNTMLFAMYRMGYHGRATV--HGFRGVASTWLNEAGYHPDW----IERQLAHDERNEVR  366
            S+NT+  A+  MGY+    V  HGFR++A + L E+G    W    +ERQ++H+ERN VR
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVR  350

Query  367  GAY-NSAQYLTGRRQMMCDWANFLDGLR  393
            +AY + A+ L  RR M+  WA+FLD+ R
Sbjct  351  AAYIHKAEHLEERRLMLQWWADFLDANR  378

403) BTH_I0928 in NC_007651


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  218 bits (812),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 165/380 (44%), Positives = 243/380 (64%), Gaps = 23/380 (6%)

Query  71   LYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEVSlaqarqaclaarkllaaGTDPTEQK  130
            ++L V PNGSRYWR++YR+ GKEK  ++GVYPEVSL++AR     ARKL++ G DP EQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  131  REIKRARAIEASSSFEAVAREWFESQKDGWTEVYANKVINSLEVDAFPRIGSKPLRDIEA  190
            R  K    ++ S  FE +AR W  S+K+ W++  ++KV++SLE + FP IG++ +  +++
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  191  PDMLEIVRAIEARGVRETAKRVLQRSRAVFQYGIMTGRCSRNPAADIDAETVLKKGQGVK  250
            PD+L  VRA EA+ + E A R+ QR  AV +Y++ +G    NPA D+ +     K Q   
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQ---  174

Query  251  HMARVKPVEIPQLMRDIAAYSGDRVTQLALRFMALTFTRTTEMINAEWDEFDERAAEWRI  310
            H + +    +P+L+  I++Y G+ VTQLA+ +  L F R++E+  A W E+D   A W I
Sbjct  175  HRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTI  234

Query  311  PPDR------------MKMRDPHIVPLSRQALEVLAALRELNGNQRLVFYSVQG-RSHIS  357
            P++R             KMR PH+VPLS+Q + +LA L+   G++ L+F + ++ R  IS
Sbjct  235  PAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPIS  294

Query  358  NNTMLYALYRMGYKSRMT--GHGFRGLAATVLRELGY-SRDVVDRQLAHAERNQVTAAYV  414
            +NT+  AL  MGY +     GHGFR++A + L E G  SRD V+RQ++H ERN V AAY+
Sbjct  295  ENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYI  354

Query  415  H-AEYLPERRKMMQHWADYL  433
            H AE L ERR M+Q WAD+L
Sbjct  355  HKAEHLEERRLMLQWWADFL  374

404) Fraau_2605 in NC_017033


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  218 bits (810),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 156/380 (42%), Positives = 244/380 (65%), Gaps = 19/380 (5%)

Query  27   LHLKVEATGRKYWRYDFRIAGKPDTFAVGVYPKVTLAEARLRHAEASALVSQGINPkahk  86
            + L V++ G +YWR  +RI GK  T+A+GVYP V+L+EAR ++ EA  L+S+G++P  +K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  87   rakqaaavvanantfqavaDEWMAQQKPKMAKATYDKAMWMLADLVYPWLGKRPISEIDA  146
            RAK+  + +  +    A    W A +K   A++  DK +  L   V+P +G+R I+ +++
Sbjct  61   RAKKVVPDLQLSFEHIARR--WHASNKQW-AQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  147  PELLAVLRRIEERGANETAHRTKQRCGQIFRYAIATGRAKHDPSGDLRGALAPPITKSRA  206
            P+LL  +R  E +   E A R +QR + + RYA+ +G  + +P+ D+ GAL+    + R+
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  207  AITDPQKVGELLRAIDGYSGSFSVICALRLAPMLFVRPGELRHAEWAEFDLDQGLWRIPA  266
            A+ D  ++ ELL  I++Y G      A+ L  ++F+R++ELR A W+E+D+D+++W IPA
Sbjct  178  AL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  267  EK------------MKMRDEHLVPLPDQALAILRDLLPLTGPDGYLFPGERSASRPMSEN  314
            E+             KMR  HLVPL+ Q +AIL +L   +G +G +F G + + +P+SEN
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  315  TVNAALRRLGYD-KDTMTGHGFRAMASTRLNELG-WSPDVIERQLAHAERNKVRAAY-NR  371
            TVN ALR +GYD  + + GHGFRAMA + L E G WS D +ERQ++H ERN VRAAY ++
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  372  AQYLPERQRMMQAWADYLDS  391
            A+ L ER+ M+Q WAD+LD+
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

405) Nmul_A2184 in NC_007614


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  217 bits (806),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 154/380 (41%), Positives = 246/380 (65%), Gaps = 22/380 (5%)

Query  26   LYLLLKPNGSRWWRFDYRYGGKRKTLSMGVYPDVSLKDARNRRDEARKLLASDVDPGENR  85
            ++LL+ PNGSR WR+ YR  GK KTL++GVYP+VSL +AR +RDEARKL++ +VDP E++
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAVKAAKLEKTTNSFEVITREWYAKFSPTWNESHGeriirrferdifPWIGSKPISEIAA  145
            +A K   +     SFE I+R W A  +  W +SH++++++ +E ++FP IG++ I+ + +
Sbjct  61   RAKKV--VPDLQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PELLATVRRIESRGAVETAHRALGNCGQVFRYAIATARATRDISADLRGALPPVKGEHFA  205
            P+LL  VR  E++   E A R     + V RYA+ ++    + + D+ GAL  VK +H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  AITEPKQVGALLRAIDGYTGSHVVRCALRLAPLVFVRPGELRKAEWKDIDLDGGEW----  261
            A+ +  ++  LL  I++Y G  V + A+ L  LVF+R++ELR A W +ID+D + W    
Sbjct  178  AL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  262  --------RYT--VTKTNTPHIVPLSTQAVEILKELQALTGRSRFVFPGARTNGRPMSDN  311
                    +++   +K  TPH+VPLS Q V IL ELQ+ +G + ++F GA+   +P+S+N
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  312  AILAALRRMGID-KEEMSGHGFRAMARTILDEVLGVRP-DFIEHQLAHSVRDPNGRAY-N  368
            ++  ALR MG D  +++ GHGFRAMA + L E  G+++ D +E+Q++H  R+    AY +
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIES-GLWSRDAVERQMSHQERNGVRAAYIH  355

Query  369  RTAHLPERRKMMQQWADYLD  388
            ++ HL ERR M+Q WAD+LD
Sbjct  356  KAEHLEERRLMLQWWADFLD  375

406) Bcep1808_2451 in NC_009256


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  215 bits (802),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 165/383 (44%), Positives = 253/383 (67%), Gaps = 25/383 (6%)

Query  26   LLLLITPAGGKRWIFKYRIDGKEKSLALGTYPDVSLaeararrdsareKLAAGVDPSEak  85
            ++LL+ P G++ W ++YRI GKEK+LALG YP+VSL+EAR++RD AR  ++ GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kadkraaqlaaaSSFEIVAREWFETQRGGWSEVYAGKVINCLEVDVFPRLGARPIANIDA  145
            +A K  ++L    SFE +AR W  +++  W++  ++KV++ LE +VFP +G R I+ +++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PELLAIIRAVESRGVRETAKRVLQRSRAVFQYGIMTGRCSRNPAADIDAE-TVLKKSTGV  204
            P+LL  +RA E++ + E A R+ QR  AV +Y++ +G    NPA D+ +  T +K+    
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR----  173

Query  205  QHMARVKVTEIPQLMRDIDEYSGDLVTRLALRFMALTFVRTKEMIQAEWHEIDVGAAEWR  264
            QH + + ++ +P+L+  I+ Y G+ VT+LA+ +  L F+R+ E+  A W EID++ A W 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  265  VPAER------------MKMRDPHIVPLSRQALDVLAQLREINGQRRFVFYSVQG-RSHI  311
            +PAER             KMR PH+VPLS+Q + +LA+L+   G+  ++F + ++ R  I
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  312  SNNTMLYALYRMGYKSR--MTGHGFRGLAATTLRELG-YSRDVVERQMAHAERNQVTAAY  368
            S+NT+  AL  MGY +   + GHGFR++A ++L E G  SRD VERQM+H ERN V AAY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  369  VH-AEYLPERRKMMQHWADHLDE  390
            +H AE L ERR M+Q WAD LD 
Sbjct  354  IHKAEHLEERRLMLQWWADFLDA  376

407) RD1_2228 in NC_008209


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  214 bits (798),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 244/387 (64%), Gaps = 28/387 (7%)

Query  40   LYVLVKPNGSKLWQMKYRLDGREKTLSIGAYPAVSLQQARKSRDAARSMIANGEDPSeek  99
            +++LV PNGS+ W+++YR+ G+EKTL++G YP VSL +AR  RD AR +I++G DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  100  qeqkrlkreASGQTFEKIGGMFL--DKQRKEGKSKATLDKTAYHLKLANHDF---GKKPI  154
            + +K +       +FE I+      +KQ+ ++ S   L        L  H F   G++ I
Sbjct  61   RAKKVVPDLQ--LSFEHIARRWHASNKQWAQSHSDKVLK------SLETHVFPFIGNRDI  112

Query  155  TAITAPMILRTLRKVEAKGNYETAHRLRARIGSVFRYAVASGLAETDPTYALRDALIRPT  214
            T++ +P +L  +R  EAK  YE A RL+ RI++V RYAV SG+   +P+  + +AL    
Sbjct  113  TTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVK  172

Query  215  RQHRAAITDPTAFGALLREIDVFDGQVTTRIalqllallaqRPGELRHAKWSEFDEADKV  274
            RQHR+A+ D + +  LL  I+ + GQ  T++A+ L  L+  R++ELR A+WSE+D  + +
Sbjct  173  RQHRPAL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAM  231

Query  275  WAIPAGK------------MKMRRDHFVPLADQAITLLNELRPLTGESEYLFPSLRSWHR  322
            W+IPA +             KMR  H+VPL+ Q +++L EL+  +GE+  +F + +  ++
Sbjct  232  WTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRK  291

Query  323  PMSENTMNAALRRMGY-SGDEMTAHGFRATFSTLANESGLWNPDAIERALAHEERNEVRR  381
            P+SENT+N ALR MGY + +++ +HGFRA   +   ESGLW+ DA+ER ++H+ERN VR 
Sbjct  292  PISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRA  351

Query  382  AYA-RGAHWEERVKLSDWWAGRLDDFR  407
            AY  ++ H EER  + +WWA+ LD  R
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANR  378

408) Bamb_2400 in NC_008390


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  214 bits (795),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 166/386 (44%), Positives = 256/386 (67%), Gaps = 25/386 (6%)

Query  26   LLLLITPAGGKRWVLKYRVDSKEKSLALGTYPDVSLaeararrdnareKLAAGVDPSEak  85
            ++LL+ P G++ W L+YR+ +KEK+LALG YP+VSL+EAR++RD+AR  ++ GVDP E K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kadkraaqlaaaSSFEIVAREWFDTQRGGWSEVYAGKVISCLEVDVFPRLGARPIASIDA  145
            +A K  ++L    SFE +AR W  +++  W++  ++KV+  LE +VFP +G R I+++++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PELLAIIRTVESRGVRETAKRVLQRSRAVFQYGIMTGRCARNPAADIDAE-TVLKKSTGV  204
            P+LL  +R+ E++ + E A R+ QR  AV +Y++ +G    NPA D+ +  T +K+    
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR----  173

Query  205  QHMARVKATEIPRLMRDIDEYSGDLVTRLALRFMALTFVRTKEMIQAEWPEIDVDAAEWR  264
            QH + +  + +P L+  I+ Y G+ VT+LA+ +  L F+R+ E+  A W+EID+D A W 
Sbjct  174  QHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  265  VPAER------------MKMRDPHIVPLSRQALGVLAQLREINGQQRFVFYSVQG-RSHI  311
            +PAER             KMR PH+VPLS+Q +++LA+L+   G++ ++F + ++ R  I
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPI  293

Query  312  SNNTMLYALYRMGYKSR--MTGHGFRGLAATALRELG-YSRDVVERQMAHAERNQVTAAY  368
            S+NT+  AL  MGY +   + GHGFR++A +AL E G  SRD VERQM+H ERN V AAY
Sbjct  294  SENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAY  353

Query  369  VH-AEYLPERREMMQHWADRLDELRA  393
            +H AE L ERR M+Q WAD LD  R 
Sbjct  354  IHKAEHLEERRLMLQWWADFLDANRE  379

409) Neut_2505 in NC_008344


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  213 bits (794),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 158/393 (41%), Positives = 247/393 (63%), Gaps = 34/393 (8%)

Query  29   LYLLIKPNNSKWWRFDYSIDGKRKTLSLGVYPTVSLKaardradaarqdVVNGIDPSTSR  88
            ++LL+ PN S+ WR+ Y I GK KTL+LGVYP VSL  AR + D AR+ + +G+DP   +
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  89   KDHKAKQATEREADRRIAEGLPAID-SFEDVAREWFSKFSTEWAPSHADKIIRRLERDIF  147
            +  K                +P ++ SFE++AR W +  + +WA SH+DK+++ LE ++F
Sbjct  61   RAKKV---------------VPDLQLSFEHIARRWHAS-NKQWAQSHSDKVLKSLETHVF  104

Query  148  PWIGKQHITDVNAPALLSVLGRIESRGAKETAHRALQNCGQIFRYAVATGRVELNPAPSL  207
            P IG+++IT +N+P LL  +   E++   E A R  Q  + + RYAV +G +  NPA  +
Sbjct  105  PFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDM  164

Query  208  RDFLPSPKPAHHAAIIEPQAVGELLRAIDSYQGYFVTKCALRIAPYVFVRPGELRNAEWV  267
             + L + K  H++A ++   + ELL  I+SY+G  VT+ A+ +   VF+R++ELR A W 
Sbjct  165  AGALTTVKRQHRPA-LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWS  223

Query  268  EINLDQAEWDIPAER------------MKMREPHLVPLATQVVEILRELYALTGSGRFVF  315
            EI++D+A W IPAER             KMR PHLVPL+ QVV IL EL + +G   ++F
Sbjct  224  EIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIF  283

Query  316  PGARTTSRPMSNNAVLAALRRMGFG-KDEMTGHGFRAMA-RTILDQELHVRPDFIEHQLA  373
             GA+   +P+S+N+V  ALR MG++  +++ GHGFRAMA  ++++  L  R D +E+Q++
Sbjct  284  TGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSR-DAVERQMS  342

Query  374  HAVRDANGRAY-NRTTHLPERKQMMQDWADYLD  405
            H  R++   AY +++ HL ER+ M+Q WAD+LD
Sbjct  343  HQERNGVRAAYIHKAEHLEERRLMLQWWADFLD  375

410) LFML04_0012 in NC_018649


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  212 bits (789),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 150/353 (43%), Positives = 228/353 (65%), Gaps = 17/353 (4%)

Query  1    MGVYPETSLrearerrdeakkkieSGIDPSHARKAKKESDSGADTFETIAREWFEKFSPT  60
            +GVYPE SL EAR +RDEA+K I  G+DP + ++AKK       +FE IAR W    +  
Sbjct  28   LGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHAS-NKQ  86

Query  61   WSPSHGDRIIRRLERDIFPWLGKRSIKDIKAPEFLAVLRRIESRGAVETAHRASQNCGQV  120
            W+ SH+D++++ LE ++FP +G+R I  +++P++L  +R  E++   E A R  Q  + V
Sbjct  87   WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAV  146

Query  121  FRYAAAMGRTEGDPSGDLRGAIPPTTTKHHASITDPKEIGGLLRAIDSYEGGLVVRCALK  180
             RYA   G    +P+ D+ GA+     +H++++  ++ +  LL  I+SY G  V + A+ 
Sbjct  147  MRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSR-LPELLSRIGSYKGQPVTQLAVM  205

Query  181  LAPLVFVRPGELRRAEWSEIDFEKMEWRIPAEK------------MKMREQHIVPLSRQA  228
            L  LVF+R++ELR A WSEID+++  W IPAE+             KMR  H+VPLS+Q 
Sbjct  206  LNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQV  265

Query  229  LGILRELQPLTGEGKYLFPSPRSWDRPMSENAVLAALRRMGY-SGDQMTGHGFRSMASTI  287
            ++IL ELQ  +GE   +F +++   +P+SEN+V  ALR MGY + +++ GHGFR+MA + 
Sbjct  266  VAILAELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSA  325

Query  288  LIEQG-WNRDAIERQLAHAERDEIRAAYNY-AQHLPERRKMMQAWANYLDELR  338
            LIE G W+RDA+ERQ++H ER+ +RAAY   A+HL ERR M+Q WA++LD  R
Sbjct  326  LIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANR  378

411) XCV2217 in NC_007508


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  212 bits (787),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 168/386 (44%), Positives = 252/386 (66%), Gaps = 24/386 (6%)

Query  26   LYLLMRPDGARWWRWDYRRPVTGKRNTLSLGTYPDTGladarekrdaarkllaaGVDPGE  85
            ++LL++P+G+R WR  YR  + GK +TL+LG YP+ +L++AR KRD ARKL++ GVDP E
Sbjct  1    MFLLVHPNGSRYWRLRYR--ILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE  58

Query  86   QRKQAKQERAALVDAAGETFEVVAREWMARQTV-ARVTAEKNRWLLETFLFPEIGSRPIG  144
            Q++  K     +V     +FE +AR W A +   A+  ++K    LET +FP IG+R I 
Sbjct  59   QKRAKK-----VVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDIT  113

Query  145  EITPRELLDALRKIEATGKLETAARAKIKAGQVFRYAMLEGKAEIDPTaslrgalkaaka  204
             +   +LL ++R  EA    E A+R + + + V RYA+  G    +P+  + GAL + K 
Sbjct  114  TLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKR  173

Query  205  rhhaaVTEPAKIGQLLRAIEGFSGQPVTHAALKLAPLVFVRPGELRAAEWAEIDLDAAMW  264
            +H++A+ + +++ +LL  I ++ GQPVT+ A+ L  LVF+R++ELR A W+EID+D AMW
Sbjct  174  QHRPAL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMW  232

Query  265  RIRPER------------MKMKAAHLVPLSSQAVAILRDLHALTGGGHHVFPGLR-PNRP  311
             I +ER             KM+++HLVPLS Q VAIL +L++ +G    +F G + P +P
Sbjct  233  TIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKP  292

Query  312  MSENTVNAALRALGY-SGDEMTGHGFRSMAATRLNELG-WNADAVERQLAHAETNKVREA  369
            +SENTVN ALR +GY + +++ GHGFR+MA + L E G W+ DAVERQ++H E N VR A
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  370  YTHAAQYLHERVRMMQAWADYLDGLR  395
            Y H A+ L+ER  M+Q WAD+LD+ R
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANR  378

412) Tbd_2005 in NC_007404


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  212 bits (787),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 159/380 (42%), Positives = 242/380 (64%), Gaps = 22/380 (5%)

Query  42   LYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDVSLararqkrddaraMLADGTDPGEQR  100
            ++LLV+  G +YWR+ YR+LGK KTLALGVY++VSL+ AR KRD+AR ++++G DP EQ+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  101  KETKRANQAAQANSFEAVAREWHAMKLKRKWTQSTADKTMAQLEAYVFPEMGHLPIASVK  160
            +  K   +     SFE +AR WHA +  ++W+QS +DK +  LE+ VFP +G+  I++++
Sbjct  61   RAKKVVPDLQL--SFEHIARRWHASN--KQWAQSHSDKVLKSLETHVFPFIGNRDITTLN  116

Query  161  ASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGVATGRAEDNPAAHLLGALHKPEVNHR  220
            +++LL  +R  E + I   A RL++  + + RY+V +G    NPA ++ GAL     +HR
Sbjct  117  TPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHR  176

Query  221  PAITDRRGFGAFLRDLREATGYDAVTRHAAYFALLTFVRAQEFRYAKWEEIDWQAKEWKV  280
            PA+   R +  +L  +    G ++VT+ A  + LL F+R+ E+RYA+W EID +   W +
Sbjct  177  PALDLSR-LPELLSRIGSYKG-QPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTI  234

Query  281  PAKR---------MKTGKALPAHTVPLSQQALALLTELKNLTGHSPYLFPKVKGYGDAEV  331
            PA R          + +K   +H VPLS+Q +A+L+EL+  +G++  +F    + +    
Sbjct  235  PAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFT--GAHDPRKP  292

Query  332  ISENTVGKMLNKMGYQGRQ--CVHGFRASARSILSEQG-WSREAMERQLDHKETDSTVAA  388
            ISENTV K L  MGY+  Q  C HGFRA A S L E G WSR+A+ERQ+ H+E ++  AA
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  389  YA-RSEHLPERRNMMQAWAD  407
            Y  ++EHL ERR M+Q WAD
Sbjct  353  YIHKAEHLEERRLMLQWWAD  372

413) int in NC_020409


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  211 bits (785),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 156/379 (42%), Positives = 233/379 (62%), Gaps = 17/379 (4%)

Query  28   LEVTPTGSKLWRLRYRYNDKGKMMALGKLTDVDLAQARDECRKWKRCLREGFDPALVKKE  87
            L V P GS+ WRLRYR  +K K +ALG   +V L++AR      ++ + EG DP   K+ 
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   EDARSSGKDSFETVTREWFAKFKQKWAEQTGVRKLARLESHVFPLIGSLPIDKVDAPQIR  147
                +  + SFE ++R W A  KQ WA+  + + L  LE+HVFP+IG+  I  +++P++ 
Sbjct  63   KKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLL  121

Query  148  RVVLRLESLEKLHTAHRVKNIIGEIMRYAVAMGLILHNPVPDLAGVLPPTKEIHRASIVD  207
              V   E+ +  + A R+++ I+ +MRYAV  G+I  NP  D+AG L   K  HR+++ D
Sbjct  122  IPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPAL-D  180

Query  208  PKGIGGLLRAIDEYQGSLVTRCALKLAPITFVRPGELRHAEWSEIDYEGKEWRIPAEK--  265
               +  LL  I+ Y+G  VT+ A+ L  + F+R++ELR A WSEID +   W IPAE+  
Sbjct  181  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240

Query  266  ----------MKMKRPHVVPLSRQAVEVLKEVELVTGHGGYIFPSERSSARPMSNNTINA  315
                       KM+ PH+VPLS+Q V +L E++  +G+ G IF + + + +P+S+NT+N 
Sbjct  241  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300

Query  316  ALRRMGY-TKDEMTGHGFRSMASTNLNELGF-HPDHIERQLAHVEANRVRAAYNY-AEHL  372
            ALR MGY T +++ GHGFR+MA + L E G+   D +ERQ++H E N VRAAY   AEHL
Sbjct  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360

Query  373  VERKKMMQAWADWLDGVKA  391
             ER+ M+Q WAD LD+ + 
Sbjct  361  EERRLMLQWWADFLDANRE  379

414) AvCA6_40500 in NC_021150


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  209 bits (777),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 151/377 (41%), Positives = 242/377 (65%), Gaps = 19/377 (5%)

Query  28   LEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVTLQKARQLRDAARQLLAEGKDPSAERKA  87
            L V P GS+ WR RYR+ G+ K LALGVYP V+L  AR  RD AR+L++EG DP  +++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   EQEAQQSDGLTFETLAREWHAYRAPRWAKSTADKTAAYLESDLLPVLGKRPVKAITRPEL  147
             +   + + L+FE +AR WHA    +WA+S +DK    LE++++P +G+R + ++  P+L
Sbjct  63   KKVVPDLQ-LSFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  148  VELLHGIEDRGAHNVAKKCRQWLSQIFRFGLAKGSVDANPATDLDvvaahapatrhhphv  207
            +  +++ E +   ++A + +Q++S + R+++  G +  NPA D+   A  +   +H+P +
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMA-GALTTVKRQHRPAL  179

Query  208  tFAELPELLGKIEGASINVLTRHAIRLLVLTGVRPGELRAAPWSEFDLKAAVWTIPKER-  266
             ++ LPELL++I +   + +T+ A+ L +L  +R++ELR A WSE+D+  A+WTIP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  267  -----------MKARRPHIVPLPRQAMAILRELQEITGAYELVFAGRNNSARPMSENTVN  315
                        K R PH+VPL++Q +AIL ELQ  +G   L+F+G +++ +P+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  316  KALADAGYRGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDQDEMRDTYNH-ATY  371
            KAL   GY   Q   GHGFR +  + L   G  +RD +ERQ++H +++ +R +Y H A  
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  372  LEQRRDMMQAWADSIDA  388
            LE+RR M+Q WAD +DA
Sbjct  360  LEERRLMLQWWADFLDA  376

415) AvCA_40500 in NC_021149


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  209 bits (777),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 151/377 (41%), Positives = 242/377 (65%), Gaps = 19/377 (5%)

Query  28   LEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVTLQKARQLRDAARQLLAEGKDPSAERKA  87
            L V P GS+ WR RYR+ G+ K LALGVYP V+L  AR  RD AR+L++EG DP  +++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   EQEAQQSDGLTFETLAREWHAYRAPRWAKSTADKTAAYLESDLLPVLGKRPVKAITRPEL  147
             +   + + L+FE +AR WHA    +WA+S +DK    LE++++P +G+R + ++  P+L
Sbjct  63   KKVVPDLQ-LSFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  148  VELLHGIEDRGAHNVAKKCRQWLSQIFRFGLAKGSVDANPATDLDvvaahapatrhhphv  207
            +  +++ E +   ++A + +Q++S + R+++  G +  NPA D+   A  +   +H+P +
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMA-GALTTVKRQHRPAL  179

Query  208  tFAELPELLGKIEGASINVLTRHAIRLLVLTGVRPGELRAAPWSEFDLKAAVWTIPKER-  266
             ++ LPELL++I +   + +T+ A+ L +L  +R++ELR A WSE+D+  A+WTIP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  267  -----------MKARRPHIVPLPRQAMAILRELQEITGAYELVFAGRNNSARPMSENTVN  315
                        K R PH+VPL++Q +AIL ELQ  +G   L+F+G +++ +P+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  316  KALADAGYRGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDQDEMRDTYNH-ATY  371
            KAL   GY   Q   GHGFR +  + L   G  +RD +ERQ++H +++ +R +Y H A  
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  372  LEQRRDMMQAWADSIDA  388
            LE+RR M+Q WAD +DA
Sbjct  360  LEERRLMLQWWADFLDA  376

416) Avin_40500 in NC_012560


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  209 bits (777),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 151/377 (41%), Positives = 242/377 (65%), Gaps = 19/377 (5%)

Query  28   LEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVTLQKARQLRDAARQLLAEGKDPSAERKA  87
            L V P GS+ WR RYR+ G+ K LALGVYP V+L  AR  RD AR+L++EG DP  +++A
Sbjct  3    LLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRA  62

Query  88   EQEAQQSDGLTFETLAREWHAYRAPRWAKSTADKTAAYLESDLLPVLGKRPVKAITRPEL  147
             +   + + L+FE +AR WHA    +WA+S +DK    LE++++P +G+R + ++  P+L
Sbjct  63   KKVVPDLQ-LSFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120

Query  148  VELLHGIEDRGAHNVAKKCRQWLSQIFRFGLAKGSVDANPATDLDvvaahapatrhhphv  207
            +  +++ E +   ++A + +Q++S + R+++  G +  NPA D+   A  +   +H+P +
Sbjct  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMA-GALTTVKRQHRPAL  179

Query  208  tFAELPELLGKIEGASINVLTRHAIRLLVLTGVRPGELRAAPWSEFDLKAAVWTIPKER-  266
             ++ LPELL++I +   + +T+ A+ L +L  +R++ELR A WSE+D+  A+WTIP ER 
Sbjct  180  DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERE  239

Query  267  -----------MKARRPHIVPLPRQAMAILRELQEITGAYELVFAGRNNSARPMSENTVN  315
                        K R PH+VPL++Q +AIL ELQ  +G   L+F+G +++ +P+SENTVN
Sbjct  240  PLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVN  299

Query  316  KALADAGYRGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDQDEMRDTYNH-ATY  371
            KAL   GY   Q   GHGFR +  + L   G  +RD +ERQ++H +++ +R +Y H A  
Sbjct  300  KALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  359

Query  372  LEQRRDMMQAWADSIDA  388
            LE+RR M+Q WAD +DA
Sbjct  360  LEERRLMLQWWADFLDA  376

417) DP0425 in NC_006138


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  209 bits (779),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 153/380 (41%), Positives = 233/380 (62%), Gaps = 28/380 (7%)

Query  28   VTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQARKIHREARALVREGCNPARERRRKK  87
            V  +G + W  RYR+ +K++   LG YPE+SL +AR  + EAR L+ EG +P  ++R KK
Sbjct  5    VHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKK  64

Query  88   QEVISKEKAERDDRSKSFEYIALEWIENNKESWSPSHQQAVLASLRNNVFSAFGNTPVDT  147
              V++       D   SFE IA  W  +NK+ W+ SH + VL SL  +VF+ +GN  + T
Sbjct  65   --VVP-------DLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITT  114

Query  148  ITPPDVLRTIRAIENRGSLEIVRKVLQRTNAVFRYAIQTGRATYNPAADMQGALKAKTVE  207
            +  PD+L  +RA E +   EI  ++ QR +AV RYA+Q+G   YNPA DM GAL +   +
Sbjct  115  LNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQ  174

Query  208  HMPAVFDSELAQLLQDISSNQKIHVTTKLAIQFTALTACRGGEVRNARWQEVNLDTNEWH  267
            H PA+  S L++LL  I+S  K +  T+LA+ +  L   R++E+R ARW E+++D   W 
Sbjct  175  HRPALDLSRLPELLSRIGSY-KGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWT  233

Query  268  IPAER------------MKMRRAHIVPLSIQALAILHRAGALW-GEDGFVFPSIRDRSKP  314
            IPAER             KMR +H+VPLS Q +AIL    + W GE+G++F + +D  KP
Sbjct  234  IPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQT-WAGENGLIFTGAHDPRKP  292

Query  315  MSDNAMGKAFRDMGYRGKAT--PHGFRSSFSSMAHEQSGFASEVIEKSLAHEEKNKVKGA  372
            +S+N++ KA+R MGY        HGFR+   S   E +  + + +E+ ++H+E+N V++A
Sbjct  293  ISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAA  352

Query  373  Y-NRAEYLEQRRELLQWWGE  391
            Y ++AE LE+RR +LQWW++
Sbjct  353  YIHKAEHLEERRLMLQWWAD  372

418) DVU1527 in NC_002937


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  207 bits (771),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 238/384 (62%), Gaps = 21/384 (5%)

Query  25   MYLEVPPSGNKRWRLKYRVNGKEKRLSLGVYPNVGLKEAREKRDELRRLIAEGIDPAAQR  84
            M+L V P+G++ WRL+YR+ GKEK L+LGVYP+V+L EAR KRDE R+LI+EG+DP  Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   CPQKVAPTAD-SFEMVAREWMDLRSPAWAPRHLSTTCQRLEAYIFPHIGPLPIDQIGPLD  143
             ++KV P  + SFE +AR W +  +  WA  H     + LE+ +FP IG   I  +   D
Sbjct  61   RAKKVVPDLQLSFEHIARRW-HASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  144  VLNALRIVEKRGAVEAARKTLSICSQVFRYAVASARIQSDPCRDLRGALKTRQPGHYAAI  203
            +L ++R  E +   E A +     S V RYAV S+ I+ +P  D+ GAL T +  H  + 
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQH-RPA  178

Query  204  VDPKDVGALMRAIDGYSGAMVVRCALRFLALTFVRPGELRAAEWNEFDMERRIWTIPAHK  263
            +D   +  L+  I++Y G  V + A+ +  L F+R++ELR A W+E+D++  +WTIPA++
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  264  ------------MKKRREHIVPLSTQALAVLRDVRATAPRLNSPMVFQSVRLRSDRGLSE  311
                         K R  H+VPLS Q +A+L ++++ A   ++ ++F + +  + + +SE
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAG--ENGLIFTGAH-DPRKPISE  295

Query  312  NTLLVALRSLGYGQG-TMTAHGFRAMASSLLNGLG-YNPDVIERQLAHIEGNKIRAAY-H  368
            NT+  ALR +GY+    + +HGFRAMA S L   G  + D +ERQ++H E N +RAAY H
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  369  RTEYLEERTAMMQAYADYLDSLRD  392
            ++E LEER  M+Q  AD+LD+ R+
Sbjct  356  KAEHLEERRLMLQWWADFLDANRE  379

419) Deval_1767 in NC_017310


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  207 bits (771),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 238/384 (62%), Gaps = 21/384 (5%)

Query  25   MYLEVPPSGNKRWRLKYRVNGKEKRLSLGVYPNVGLKEAREKRDELRRLIAEGIDPAAQR  84
            M+L V P+G++ WRL+YR+ GKEK L+LGVYP+V+L EAR KRDE R+LI+EG+DP  Q+
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  85   CPQKVAPTAD-SFEMVAREWMDLRSPAWAPRHLSTTCQRLEAYIFPHIGPLPIDQIGPLD  143
             ++KV P  + SFE +AR W +  +  WA  H     + LE+ +FP IG   I  +   D
Sbjct  61   RAKKVVPDLQLSFEHIARRW-HASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  144  VLNALRIVEKRGAVEAARKTLSICSQVFRYAVASARIQSDPCRDLRGALKTRQPGHYAAI  203
            +L ++R  E +   E A +     S V RYAV S+ I+ +P  D+ GAL T +  H  + 
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQH-RPA  178

Query  204  VDPKDVGALMRAIDGYSGAMVVRCALRFLALTFVRPGELRAAEWNEFDMERRIWTIPAHK  263
            +D   +  L+  I++Y G  V + A+ +  L F+R++ELR A W+E+D++  +WTIPA++
Sbjct  179  LDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAER  238

Query  264  ------------MKKRREHIVPLSTQALAVLRDVRATAPRLNSPMVFQSVRLRSDRGLSE  311
                         K R  H+VPLS Q +A+L ++++ A   ++ ++F + +  + + +SE
Sbjct  239  EPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAG--ENGLIFTGAH-DPRKPISE  295

Query  312  NTLLVALRSLGYGQG-TMTAHGFRAMASSLLNGLG-YNPDVIERQLAHIEGNKIRAAY-H  368
            NT+  ALR +GY+    + +HGFRAMA S L   G  + D +ERQ++H E N +RAAY H
Sbjct  296  NTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIH  355

Query  369  RTEYLEERTAMMQAYADYLDSLRD  392
            ++E LEER  M+Q  AD+LD+ R+
Sbjct  356  KAEHLEERRLMLQWWADFLDANRE  379

420) NAL212_2545 in NC_015222


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  205 bits (761),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 155/380 (41%), Positives = 246/380 (65%), Gaps = 19/380 (5%)

Query  26   MYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVTLADARDRRNEARKLLANGADPGAVk  85
            M++ V PNG++YWR+ YR+ +K+KTLALGVYP+V+L++AR +R+EARKL+++G DP    
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCE--  58

Query  86   qsqkkqakiaasnsFELIAREFHSLKTPMWSTNHAADWIKTLEREIFPKFGNYPISEIDA  145
            Q + K+       SFE IAR  H+ +   W+ +H+   +K+LE ++FP +GN  I+ +++
Sbjct  59   QKRAKKVVPDLQLSFEHIARRWHASNKQ-WAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  PAVLDAIRAIESRDAHEvaarvlqrvravcaYAIATGRARHNPASEIKGALAPQPKIKHF  205
            P +L ++RA E+++  E+A+R+ QR+ AV  YA+ +G  R NPA ++ GAL+   K +H 
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTT-VKRQHR  176

Query  206  AALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKIPA  265
            +AL    LP++L  +++Y   P+T+ A  L +L F+R++E+R A+W E+D+D  +W IPA
Sbjct  177  PALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPA  236

Query  266  ER------------MKSREPHIVPLAKQAIEILGELHPLTGHGEHLFPNRTGNGKVISEN  313
            ER             K R PH+VPL+KQ + IL+EL+  +G+   +F    +  K ISEN
Sbjct  237  EREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISEN  296

Query  314  TVLKVIERLGYKGR--MTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTEanatraa-ynr  370
            TV K +  +GY     + GHGFR++A + L   G+   D +E Q++H E N+ RAA  ++
Sbjct  297  TVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHK  356

Query  371  anyMEYRAAMMQFWADTLDA  390
            A+ +E R  M+Q WAD LDA
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

421) NCGM2_0360 in NC_017549


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  203 bits (756),  Expect = 9e-54, Method: Compositional matrix adjust.
 Identities = 156/379 (42%), Positives = 253/379 (67%), Gaps = 19/379 (5%)

Query  26   LYLLVNPNGSKLWRLKYRVGGKEKGLAFGAYPTVTLqqarqrrdearqqlaqGEDPGeqk  85
            ++LLV+PNGS+ WRL+YR+ GKEK LA+G YP V+L +AR +RDEAR+ +++G DP EQK
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kaskqakkvseLTFETLAREWYAYNAPRWAESTAYKAKLYLENDLIPGIGSRPIAAITRP  145
            +A K    +  L+FE +AR W A +  +WA+S + K    LE +++P IG+R I+++  P
Sbjct  61   RAKKVVPDLQ-LSFEHIARRWHA-SNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTP  118

Query  146  DLVDLVRKVEARGTLNAAGKIRQWLHQIYRYALAKGVVESNPATDLDVVaapakaarhhp  205
            DL+  VR  EA+   + A++++Q++  + RYA+  G++  NPA D+    +  K  ++ +
Sbjct  119  DLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  206  hlpFAELPELLEKLATAKLHTLTRSAIRLLMLTAVRPGELRAAPWCEFDLDTATWTIPAA  265
               ++ LPELL ++++ K + +T+ A+ L +L  +R++ELR A W E+D+D A WTIPA 
Sbjct  179  LD-LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKARRSHVVPLPRQAVTILRQLHELTGSYSLLFPGQQNAERPMSENT  313
            R             K R +H+VPL++Q V+IL +L+  +G  +L+F G +++ +P+SENT
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENT  297

Query  314  INKALRLVGYGGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDKDEIRGTYNH-A  369
            +NKALR++GY+  Q   GHGFR +  + L   G  +RD +ERQ++H +++ +R++Y H A
Sbjct  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKA  357

Query  370  TYLEQRRGMMQAWADSIDA  388
              LE+RR M+Q WAD +DA
Sbjct  358  EHLEERRLMLQWWADFLDA  376

422) XBJ1_1315 in NC_013892


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  188 bits (697),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 116/280 (42%), Positives = 186/280 (67%), Gaps = 15/280 (5%)

Query  26   LYLLVNPNGARYWRLKYRIAGKEKLLALGVYPDISLSDARTKRNEARRTLSDGNDPIeek  85
            ++LLV+PNG+RYWRL+YRI GKEK LALGVYP++SLS+ARTKR+EAR+ +S+G DP E+K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   kaekaakaFAVSNSFESIAIEWHEHKRPNWSKGYAEDILEYLKKDIFPYIGKRAVTEIKP  145
            +A K    + +S  FE IA  WH  ++ +W+++ ++ +L  L  ++FP+IG+R +T ++ 
Sbjct  61   RAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117

Query  146  AEMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVITGRAEFNPVTDLASALKAPKQKHFS  205
            +++L  +R  E + + +   + +Q    +  YAV +G   +NP  D+A+AL + K++H +
Sbjct  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177

Query  206  HLLADQMNAFLVALAGYSGSEVTQSATRLLMLTGVRTIELRESEWTEFDFDKDIWQIPAE  265
             L   ++  +L  +++Y G  VTQ A  L +L  +R+ ELR + W+E+D+D+ +W IPAE
Sbjct  178  ALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  266  R------------MKMRRPHIVPLSNQVKAILIKLHSITG  293
            R             KMR PH+VPLS+QV AIL  L++ +G
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAG  277

423) AMEC673_10230 in NC_018678


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  181 bits (670),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 113/282 (41%), Positives = 184/282 (66%), Gaps = 19/282 (6%)

Query  5    LKDNSFASLGKRPISTIRPRDVIETVRDIEKRGALDVAQRVLQDIGRVCRYAVQIERINF  64
            L  + F+ +G+R I+T+   D++  VR  E +   ++A R+ Q I+ V RYAVQ   I +
Sbjct  99   LETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRY  158

Query  65   NPASELSDVLKSRKVEHRASLPREQLPAFVKALSTYEEKGRLLTKYAIQLLVLTFVRPGE  124
            NPA ++++ L + K +HR++L   +LP ++  +++Y  KG+ +T+ A+ L +L F+R++E
Sbjct  159  NPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSY--KGQPVTQLAVMLNLLVFIRSSE  216

Query  125  LRGARWEEFNFEENIWRIPAER------------MKMRSEHIVPLSKQAIEVIDRIRSIT  172
            LR ARW E+++++ +W IPAER             KMR+ H+VPLSKQ + ++  +++ +
Sbjct  217  LRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWA  276

Query  173  HQYSLLFPSERDRNEPMSDNTMRRAIFKMGYDGTKPGKAKANPHGFRATASSILNEQGF-  231
             + +L+F + +D   P+S+NT+ +A+  MGYD T+        HGFRA A S L E G+ 
Sbjct  277  GENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQ----DVCGHGFRAMACSALIESGLW  332

Query  232  NPDAIERQLSHMERNGVRAAYTHHARYLDERKNMMQWWADYV  273
            + DA+ERQ+SH ERNGVRAAY H A  L+ER+ M+QWWAD++
Sbjct  333  SRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFL  374

424) A1S_2908 in NC_009085


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  178 bits (661),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 141/350 (41%), Positives = 222/350 (64%), Gaps = 15/350 (4%)

Query  1    MIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFP  60
            +I+EGVDP EQ        +   ++E++ R W    A  K  ++   +K L+ +E H+FP
Sbjct  49   LISEGVDPCEQKRAKKVVPDLQLSFEHIARRW---HASNKQWAQSHSDKVLKSLETHVFP  105

Query  61   KFKDKAIEQITLRDLKDALNV-----IYDHSPDNAQRIRASLIQVYSYAVQHSYIQTNIA  115
             + ++ I  +   DL  ++       IY+ ++   QRI A +     YAVQ + I+ N A
Sbjct  106  FIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVM----RYAVQSGIIRYNPA  161

Query  116  RDLEDMDLSARKNHRATFRSLDLIPQLIRRIKADSGNPltklclllglhtflRSSEIRFA  175
             D+ +   + +++HR+++  L  +P+L+ RI +  G+P+T+L ++L L  F+RSSE+R+A
Sbjct  162  LDMAGALTTVKRQHRPAL-DLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYA  220

Query  176  RWNEIDFEAEIWRIPPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCD  235
            RW+EID++  +W IP+ R  + GVK S+RG+KM+  HLVPLSKQ + IL  +   +G+ +
Sbjct  221  RWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENG  280

Query  236  FVFPSLNNKRIFISENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQ  294
            ++F + ++ R  ISENT N ALR MGY T +++  HGFRA+A SAL E ++ SRDA+E+Q
Sbjct  281  LIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQ  340

Query  295  MSHQERNETVGAYTHIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR  344
            MSHQERN   +AY H AE LEER  ++Q W+D L A +   +ISP EY++
Sbjct  341  MSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA-NRERFISPFEYAK  389

425) MCA0676 in NC_002977


> AJ277443|62|G59|17384684|CAC81896.1|Escherichia_coli_413/89-1|-|57909..59099|int|-|integrase
Length=396

 Score =  151 bits (558),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 124/280 (45%), Positives = 182/280 (65%), Gaps = 16/280 (5%)

Query  26   LFLHVMPGGARYWRLKYRIGGKEKLMALGVYPEVSLKEararrdkaraLLGQGIDPNDHK  85
            +FL V P G+RYWRL+YRI GKEK +ALGVYPEVSL EAR++RD AR L+++G+DP ++K
Sbjct  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60

Query  86   KAAKRTEAGEDSFERIALEWHARHMANKSESHATKTLERLRKDVFPWIGNRPVREITAPE  145
            +A K     + SFE+IA  WHA +  + ++SH+ K L  L  +VFP IGNR +  + +P+
Sbjct  61   RAKKVVPDLQLSFEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPD  119

Query  146  LLSVLRRIESRGAIEL-CHVTKRICGQVMRYAIATGRAERDPAADLKGALQPVKARHFAA  204
            LL  +R  E++   E+  ++ +RI + VMRYA+ +G    +PA D+ GAL  VK +H +A
Sbjct  120  LLIPVRAAEAKQIYEIASRLQQRISA-VMRYAVQSGIIRYNPALDMAGALTTVKRQHRPA  178

Query  205  ITDPKAIGELLRAIEEYTGHFATQCALKLSPLVMLRPGEVRQaewaeidieaaewRIPAA  264
            +  ++ + ELL  I  Y G+  TQ A+ L+ LV +R++E+R A W+EIDI+ A W IPA 
Sbjct  179  LDLSR-LPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237

Query  265  K------------MKMRDEHIVPLSRQAVEILESIRPLTG  292
            +             KMR  H+VPLS+Q V IL  ++  +G
Sbjct  238  REPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAG  277