Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
hypothetical protein |
NC_009778 (Cronobacter sakazakii ATCC BAA-894) |
1e-36 |
100 |
|
Bacteriophage 343 regulatory protein CII |
NC_011993 (Escherichia coli LF82) |
2e-28 |
82 |
|
Regulatory protein CII |
NC_017634 (Escherichia coli NRG 857C) |
2e-28 |
82 |
|
Bacteriophage CII protein |
NC_022370 (Escherichia coli PMV-1) |
2e-28 |
82 |
|
Regulatory protein CII |
NC_017632 (Escherichia coli UM146) |
2e-28 |
82 |
|
bacteriophage 343 regulatory protein CII |
NC_007946 (Escherichia coli UTI89) |
2e-28 |
82 |
|
phage regulatory protein |
NC_013941 (Escherichia coli CB9615) |
2e-28 |
82 |
|
cII antiterminator protein for prophage CP-933H |
NC_002655 (Escherichia coli EDL933) |
2e-28 |
82 |
|
phage regulatory protein |
NC_017656 (Escherichia coli RM12579) |
2e-28 |
82 |
|
phage regulatory protein |
NC_017656 (Escherichia coli RM12579) |
2e-28 |
82 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
2e-28 |
82 |
|
cII antiterminator protein for prophage CP-933H |
NC_013008 (Escherichia coli TW14359) |
2e-28 |
82 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
2e-28 |
82 |
|
Phage regulatory protein |
NC_017663 (Escherichia coli P12b) |
3e-28 |
84 |
|
bacteriophage CII family protein |
NC_022082 (Klebsiella pneumoniae JM45) |
3e-21 |
57 |
|
transcriptional regulator |
NC_021741 (Serratia liquefaciens ATCC 27592) |
3e-19 |
57 |
|
CII family protein |
NC_013850 (Klebsiella variicola At-22) |
4e-19 |
60 |
|
cII |
NC_021810 (Salmonella enterica 41578) |
8e-19 |
57 |
|
cII |
NC_017623 (Salmonella enterica B182) |
8e-19 |
57 |
|
transcriptional regulator |
NC_021814 (Salmonella enterica CFSAN001921) |
8e-19 |
57 |
|
transcriptional regulator |
NC_021812 (Salmonella enterica CFSAN002069) |
8e-19 |
57 |
|
transcriptional activator protein C1 |
NC_011083 (Salmonella enterica SL476) |
8e-19 |
57 |
|
phage regulatory protein CII |
NC_013361 (Escherichia coli 11368) |
1e-18 |
56 |
|
transcriptional activator protein |
NC_017633 (Escherichia coli ETEC H10407) |
2e-18 |
54 |
|
Transcriptional activator protein C1 (modular protein) |
NC_011748 (Escherichia coli 55989) |
8e-17 |
52 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
8e-17 |
53 |
|
bacteriophage CII family protein |
NC_009436 (Enterobacter sp. 638) |
1e-16 |
57 |
|
transcriptional activator protein |
NC_017626 (Escherichia coli 042) |
2e-16 |
50 |
|
phage transcriptional regulator |
NC_008800 (Yersinia enterocolitica 8081) |
2e-16 |
46 |
|
regulatory protein |
NC_021818 (Salmonella enterica CFSAN002050) |
1e-14 |
49 |
|
transcriptional activator |
NC_016854 (Salmonella enterica D23580) |
1e-14 |
49 |
|
regulatory protein |
NC_021984 (Salmonella enterica S06004) |
1e-14 |
49 |
|
transcriptional activator-regulatory protein |
NC_016860 (Salmonella enterica T000240) |
1e-14 |
49 |
|
transcriptional activator-regulatory protein |
NC_021151 (Salmonella enterica U288) |
1e-14 |
49 |
|
transcriptional activator-regulatory protein |
NC_011147 (Salmonella enterica AKU12601) |
2e-14 |
49 |
|
transcriptional activator-regulatory protein |
NC_006511 (Salmonella enterica ATCC 9150) |
2e-14 |
49 |
|
regulatory protein |
NC_021818 (Salmonella enterica CFSAN002050) |
2e-13 |
47 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_009778_P2' AND ph.id_pai_orf='61' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc