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Homologs of t4288 gene of NC_004631_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) STY4594
( NP_458678.1 )

hypothetical protein

NC_003198
(Salmonella enterica CT18)

5e-132

100

2) SPC_4449
( YP_002639943.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

5e-132

100

3) t4288
( NP_807886.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

5e-132

100

4) TY21A_21845
( YP_007928529.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

5e-132

100

5) STBHUCCB_45450
( YP_005219963.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

2e-131

6) plu1159
( NP_928471.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

6e-52

7) PAU_03298
( YP_003042128.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-50

8) ECA0599
( YP_048716.1 )

hypothetical protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

3e-45

• Sequence Alignments

1) SPC_4449 in NC_012125


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  463 bits (1746),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 299/299 (100%), Positives = 299/299 (100%), Gaps = 0/299 (0%)

Query  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60
            MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60

Query  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120
            SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE
Sbjct  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120

Query  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180
            ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT
Sbjct  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180

Query  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240
            TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY
Sbjct  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240

Query  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEqpvidqpvpqqpRLAA  299
            YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA
Sbjct  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA  299

2) STY4594 in NC_003198


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  463 bits (1746),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 299/299 (100%), Positives = 299/299 (100%), Gaps = 0/299 (0%)

Query  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60
            MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60

Query  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120
            SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE
Sbjct  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120

Query  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180
            ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT
Sbjct  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180

Query  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240
            TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY
Sbjct  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240

Query  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEqpvidqpvpqqpRLAA  299
            YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA
Sbjct  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA  299

3) TY21A_21845 in NC_021176


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  463 bits (1746),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 299/299 (100%), Positives = 299/299 (100%), Gaps = 0/299 (0%)

Query  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60
            MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60

Query  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120
            SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE
Sbjct  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120

Query  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180
            ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT
Sbjct  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180

Query  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240
            TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY
Sbjct  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240

Query  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEqpvidqpvpqqpRLAA  299
            YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA
Sbjct  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA  299

4) t4288 in NC_004631


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  463 bits (1746),  Expect = 5e-132, Method: Compositional matrix adjust.
 Identities = 299/299 (100%), Positives = 299/299 (100%), Gaps = 0/299 (0%)

Query  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60
            MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60

Query  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120
            SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE
Sbjct  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120

Query  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180
            ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT
Sbjct  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180

Query  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240
            TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY
Sbjct  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240

Query  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEqpvidqpvpqqpRLAA  299
            YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA
Sbjct  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA  299

5) STBHUCCB_45450 in NC_016832


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  461 bits (1738),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 298/299 (99%), Positives = 298/299 (99%), Gaps = 0/299 (0%)

Query  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60
            MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60

Query  61   SDETTLARCRQVLTLWIAGLDMLLKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120
            SDETTLARCRQVLTLWIAGLDML KEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE
Sbjct  61   SDETTLARCRQVLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADE  120

Query  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180
            ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT
Sbjct  121  ETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCT  180

Query  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240
            TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY
Sbjct  181  TEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVY  240

Query  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEqpvidqpvpqqpRLAA  299
            YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA
Sbjct  241  YKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA  299

6) plu1159 in NC_005126


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  197 bits (733),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 116/286 (41%), Positives = 187/286 (66%), Gaps = 3/286 (1%)

Query  1    MSLLRFYIRHQFVERMGLELDDDAIFCLFNESQGDYVNTHIKFTKELLLPVMTHLLDSLS  60
            MS++  YI ++F ER+ L++ ++ I   +  S++DYVNT+I+F +E L++VM  +L +L 
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60

Query  61   EDPANRARCRNSERILTLWIRGMDAISHVYQDPLLMPYTHPESSGRVDTLIRPDTAVLLN  120
             D +  ARCR+   +LTLWI G+D +S   ++P  +P  HP+SSG+ D L++ + A L +
Sbjct  61   SDETTLARCRQ---VLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTE  117

Query  121  LTAEEFLRLTAQDNLPEDEQIGLEQFSKTQKYWTRFMDYLDKQLTETCLYCFERLGQFLR  180
               E +LR+T+Q++LP + +I    FSKT +YW RF   L +QL +    C+++L  F+ 
Sbjct  118  ADEETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVA  177

Query  181  HLQVEPRLIRRFSFSVGYIDVFMGPQDLHNIDAEEFESGYLEDYIDEVSDGLMTPVQFQV  240
            +   EPR +R F    G + +F+GPQD+++ID  EF++ Y+   +D V+DGL TPV F V
Sbjct  178  NCTTEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVV  237

Query  241  DVVYKNGCVIESFRSDVDIENVNNPTLKDYRDVVDEAITWVDEQFG  286
            +V YKNG ++ESF  D +++N+N  T  DY + + +AI+WV EQF 
Sbjct  238  NVYYKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFE  283

7) PAU_03298 in NC_012962


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  193 bits (715),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 115/285 (41%), Positives = 187/285 (66%), Gaps = 3/285 (1%)

Query  1    MSLLRFYIRHQFVERMGLELDDDAIFCLFNESQGDYVNTHIKFTKALLLPVMTHLLDSLS  60
            MS++  YI ++F ER+ L++ ++ I   +  S++DYVNT+I+F +  L++VM  +L +L 
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLD  60

Query  61   EDPANRARCRNSERILTLWIRGMDAISHVYQDPLLMPYTHPESSGRVDTLIRPDTAVLLN  120
             D +  ARCR+   +LTLWI G+D +S   ++P  +P  HP+SSG+ D L++ + A L +
Sbjct  61   SDETTLARCRQ---VLTLWIAGLDMLSKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTE  117

Query  121  LTAEQFLRLTAQDNLPEDEQIGLEQFSKTQKYWTRFMDYLDKQLTETCLYCFERLGQFLR  180
               E +LR+T+Q++LP + +I    FSKT +YW RF   L +QL +    C+++L  F+ 
Sbjct  118  ADEETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVA  177

Query  181  HLQVEPRLIRRFSFSVGYIDVFMGPQDLHNIDAEEFESWYLEDYIDKVSDGLMTPVQFQV  240
            +   EPR +R F    G + +F+GPQD+++ID  EF++ Y+   +DKV+DGL TPV F V
Sbjct  178  NCTTEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVV  237

Query  241  DVVYKNGRVIESFRSDVDIENVNNPALKDYRDVVDEAITWVDEQF  285
            +V YKNG ++ESF  D +++N+N  +  DY + + +AI+WV EQF
Sbjct  238  NVYYKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQF  282

8) ECA0599 in NC_004547


> NC_004631_P3|61|G57|29144544|NP_807886.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|59970..60869|-|t4288|hypothetical 
protein
Length=299

 Score =  175 bits (648),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 119/288 (42%), Positives = 191/288 (67%), Gaps = 2/288 (0%)

Query  1    MCIIHEYIQQAYQRTLGYAPDYDDICWQLDENVGHTYVNTQMLFENEQLTAVMETMLERL  60
            M II+EYI Q +   L      +DI WQL  + ++ YVNT++ F+ E+L AVM+ ML  L
Sbjct  1    MSIIDEYISQHFSERLCLDVTEEDITWQLRGSRSD-YVNTRIQFDREKLMAVMDVMLSGL  59

Query  61   DTDDAKRERSRKVLTLWINATNWLANELEHGYMHLPRVHPQISGRTDQLLRADIMPLYEL  120
            D+D++   R R+VLTLWI + + L++E E+    LPRVHP+ SG+ D LL+++  +L E 
Sbjct  60   DSDETTLARCRQVLTLWIAGLDMLSKEAEQP-DWLPRVHPHSSGQCDLLLKGNPAALTEA  118

Query  121  DESVFREASGQGDSVPDEYVTLAQFRQSERYWFRFMDHLERSLRDVSHQCAETLTQFVSN  180
            DE  +   +GQ D  ++  +    F ++ RYW RF   L + L+D++++C + L  FV+N
Sbjct  119  DEETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVAN  178

Query  181  CTFEARRIRRWCGNTGDIRLYMAPQPideidimefeddfLTQHVDAIAAGIYVPVTFRAD  240
            CT E+R++R   G+ G +RL+++PQ IDEIDI+EF+ +++   VD +A G++ PV F  +
Sbjct  179  CTTEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVN  238

Query  241  IHYRNGAVMKSFTGDTEVNDPERPNTSDYYEVMVDAIGWIREESEHVV  288
            + Y+NG ++ SFT D+EV++ +R  +SDY E M +AI+W+RE+ E+ V
Sbjct  239  VYYKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPV  286