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Homologs of SERP1561 gene of NC_002976_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SERP1561
( YP_189126.1 )

hypothetical protein

NC_002976
(Staphylococcus epidermidis RP62A)

4e-37

100

2) join
( YP_005732071.1 )

phage protein (pseudogene)

NC_017331
(Staphylococcus aureus TW20)

2e-33

• Sequence Alignments

1) SERP1561 in NC_002976


> NC_002976_P2|61|G61|57867445|YP_189126.1|Staphylococcus_epidermidis_RP62A|-|36116..36400|-|SERP1561|hypothetical 
protein
Length=94

 Score =  147 bits (542),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)

Query  1   MAYDVDFWYQSQDACQITSDFTPFSDDDQESIYMKSEDFFTMIDEYSDTNMMYDAWRMLK  60
           MAYDVDFWYQSQDACQITSDFTPFSDDDQESIYMKSEDFFTMIDEYSDTNMMYDAWRMLK
Sbjct  1   MAYDVDFWYQSQDACQITSDFTPFSDDDQESIYMKSEDFFTMIDEYSDTNMMYDAWRMLK  60

Query  61  EQVDQNTLEIIKKIEEDFCIDVDKFYKEMGEKQL  94
           EQVDQNTLEIIKKIEEDFCIDVDKFYKEMGEKQL
Sbjct  61  EQVDQNTLEIIKKIEEDFCIDVDKFYKEMGEKQL  94

2) join in NC_017331


> NC_002976_P2|61|G61|57867445|YP_189126.1|Staphylococcus_epidermidis_RP62A|-|36116..36400|-|SERP1561|hypothetical 
protein
Length=94

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 88/94 (94%), Positives = 91/94 (97%), Gaps = 1/94 (1%)

Query  1   MAYDVDFWYQSQDACQITSDFTPFSDDDQESIFMKSEDFFTMIDEYSDTNMMYDA-RMLK  59
           MAYDVDFWYQSQDACQITSDFTPFSDDDQESI+MKSEDFFTMIDEYSDTNMMYDA RMLK
Sbjct  1   MAYDVDFWYQSQDACQITSDFTPFSDDDQESIYMKSEDFFTMIDEYSDTNMMYDAWRMLK  60

Query  60  EQVDQNALDIIKKIEEDFSIDVDKFYKEMREKQL  93
           EQVDQN+L+IIKKIEEDF IDVDKFYKEM EKQL
Sbjct  61  EQVDQNTLEIIKKIEEDFCIDVDKFYKEMGEKQL  94