Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
integrase |
NC_017022 (Enterococcus faecium Aus0004) |
0.0 |
100 |
|
integrase |
NC_021994 (Enterococcus faecium AUS0085) |
0.0 |
100 |
|
DNA integration/recombination/inversion protein |
NC_014638 (Bifidobacterium bifidum PRL2010) |
2e-163 |
82 |
|
integrase family protein |
NC_015385 (Treponema succinifaciens DSM 2489) |
2e-159 |
78 |
|
Site-specific recombinase XerD |
NC_021015 ([Ruminococcus] torques L2-14) |
1e-153 |
75 |
|
integrase Tn1549-like, CTn4-Orf34 |
NC_009089 (Clostridium difficile 630) |
3e-153 |
75 |
|
Site-specific recombinase XerD |
NC_021035 (butyrate-producing bacterium SS3/4) |
2e-140 |
69 |
|
putative transposon integrase |
NC_022238 (Streptococcus constellatus C1050) |
3e-138 |
73 |
|
putative transposon integrase |
NC_022236 (Streptococcus constellatus C232) |
3e-138 |
73 |
|
putative transposon integrase |
NC_022245 (Streptococcus constellatus C818) |
3e-138 |
73 |
|
DNA integration/recombination/inversion protein |
NC_018712 (Streptococcus dysgalactiae RE378) |
5e-137 |
72 |
|
Site-specific recombinase XerD |
NC_021019 (Eubacterium cylindroides T2-87) |
1e-133 |
68 |
|
Site-specific recombinase XerD |
NC_021015 ([Ruminococcus] torques L2-14) |
3e-132 |
62 |
|
transposase |
NC_016630 (Filifactor alocis ATCC 35896) |
5e-132 |
68 |
|
transposon integrase |
NC_018608 (Staphylococcus aureus 08BA02176) |
8e-132 |
68 |
|
transposase from transposon (Integrase) |
NC_017333 (Staphylococcus aureus ST398) |
8e-132 |
68 |
|
Mobile element protein |
NC_021485 (Streptococcus agalactiae 09mas018883) |
8e-132 |
68 |
|
Tn916, transposase |
NC_004116 (Streptococcus agalactiae 2603V/R) |
8e-132 |
68 |
|
putative transposon integrase |
NC_022239 (Streptococcus anginosus C238) |
8e-132 |
68 |
|
putative transposon integrase |
NC_022238 (Streptococcus constellatus C1050) |
8e-132 |
68 |
|
Tn916 ORF2 integrase |
NC_017576 (Streptococcus gallolyticus ATCC 43143) |
8e-132 |
68 |
|
integrase |
NC_013798 (Streptococcus gallolyticus UCN34) |
8e-132 |
68 |
|
putative transposon integrase |
NC_022237 (Streptococcus intermedius C270) |
8e-132 |
68 |
|
transposase |
NC_021900 (Streptococcus lutetiensis 033) |
8e-132 |
68 |
|
transposon integrase |
NC_021175 (Streptococcus oligofermentans AS 1.3089) |
8e-132 |
68 |
|
Tn916, transposase; site-specific recombinase,phage integrase family |
NC_015291 (Streptococcus oralis Uo5) |
8e-132 |
68 |
|
hypothetical protein |
NC_010582 (Streptococcus pneumoniae CGSP14) |
8e-132 |
68 |
|
transposase |
NC_010380 (Streptococcus pneumoniae Hungary19A-6) |
8e-132 |
68 |
|
transposase |
NC_012467 (Streptococcus pneumoniae P1031) |
8e-132 |
68 |
|
transposase |
NC_017769 (Streptococcus pneumoniae ST556) |
8e-132 |
68 |
|
transposase |
NC_012469 (Streptococcus pneumoniae Taiwan19F-14) |
8e-132 |
68 |
|
phage integrase family site-specific recombinase |
NC_014251 (Streptococcus pneumoniae TCH8431/19A) |
8e-132 |
68 |
|
Tn916, transposase; site-specific recombinase,phage integrase family protein |
NC_015875 (Streptococcus pseudopneumoniae IS7493) |
8e-132 |
68 |
|
Tn916, transposase |
NC_009442 (Streptococcus suis 05ZYH33) |
8e-132 |
68 |
|
Tn916, transposase |
NC_009443 (Streptococcus suis 98HAH33) |
8e-132 |
68 |
|
integrase |
NC_012926 (Streptococcus suis BM407) |
8e-132 |
68 |
|
integrase |
NC_012926 (Streptococcus suis BM407) |
8e-132 |
68 |
|
integrase |
NC_012924 (Streptococcus suis SC84) |
8e-132 |
68 |
|
Mobile element protein |
NC_021507 (Streptococcus agalactiae ILRI112) |
9e-132 |
68 |
|
Tn916 ORF3-like protein |
NC_021213 (Streptococcus suis TL13) |
9e-132 |
68 |
|
integrase, Int_1 |
NC_021994 (Enterococcus faecium AUS0085) |
1e-131 |
68 |
|
Tn916 ORF3-like transposon integrase |
NC_014925 (Staphylococcus pseudintermedius HKU10-03) |
2e-131 |
68 |
|
Site-specific recombinase XerD |
NC_021022 ([Ruminococcus] obeum A2-162) |
7e-131 |
62 |
|
Site-specific recombinase XerD |
NC_021016 (butyrate-producing bacterium SSC/2) |
2e-130 |
62 |
|
Site-specific recombinase XerD |
NC_021019 (Eubacterium cylindroides T2-87) |
3e-130 |
62 |
|
Site-specific recombinase XerD |
NC_021040 (Roseburia intestinalis M50/1) |
1e-129 |
65 |
|
integrase Tn916-like, CTn1-Orf1 |
NC_009089 (Clostridium difficile 630) |
2e-129 |
65 |
|
putative transposon integrase |
NC_017768 (Streptococcus mutans LJ23) |
2e-128 |
67 |
|
site-specific recombinase, phage integrase family |
NC_017218 (Bifidobacterium breve ACS-071-V-Sch8b) |
1e-126 |
60 |
|
integrase |
NC_013315 (Clostridium difficile CD196) |
2e-125 |
66 |
|
integrase |
NC_013316 (Clostridium difficile R20291) |
2e-125 |
66 |
|
transposon integrase; Tn916 ORF3-like |
NC_004350 (Streptococcus mutans UA159) |
1e-123 |
68 |
|
integrase |
NC_014498 (Streptococcus pneumoniae 670-6B) |
3e-110 |
66 |
|
hypothetical protein |
NC_010582 (Streptococcus pneumoniae CGSP14) |
1e-102 |
66 |
|
phage integrase family site-specific recombinase |
NC_013895 (Clostridiales genomosp. UPII9-5) |
4e-92 |
67 |
|
Site-specific recombinase XerD |
NC_021047 (Clostridium saccharolyticum K10) |
3e-89 |
49 |
|
Site-specific recombinase XerD |
NC_021035 (butyrate-producing bacterium SS3/4) |
2e-84 |
47 |
|
Site-specific recombinase XerD |
NC_021022 ([Ruminococcus] obeum A2-162) |
2e-81 |
45 |
|
Site-specific recombinase XerD |
NC_021010 (Eubacterium rectale DSM 17629) |
2e-75 |
45 |
|
Site-specific recombinase XerD |
NC_021012 (Roseburia intestinalis XB6B4) |
2e-75 |
45 |
|
Site-specific recombinase XerD |
NC_021009 (Coprococcus catus GD/7) |
7e-75 |
43 |
|
DNA binding domain of tn916 integrase./Phage integrase family. |
NC_021014 (Ruminococcus sp. SR1/5) |
2e-71 |
47 |
|
integrase family protein |
NC_013740 (Acidaminococcus fermentans DSM 20731) |
1e-69 |
41 |
|
Site-specific recombinase XerD |
NC_021020 (Faecalibacterium prausnitzii SL3/3) |
1e-66 |
41 |
|
integrase family protein |
NC_013740 (Acidaminococcus fermentans DSM 20731) |
8e-66 |
41 |
|
Site-specific recombinase XerD |
NC_021015 ([Ruminococcus] torques L2-14) |
4e-61 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_021994_R1' AND ph.id_pai_orf='60' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc