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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AJ488511

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) S2180
( NP_837622.1 )

ISSfl3 orfB

NC_004741
(Shigella flexneri 2457T)

7e-14

2) AZL_f01510
( YP_003453455.1 )

transposase

NC_013860
(Azospirillum sp. B510)

3e-11

3) AZL_027920
( YP_003449974.1 )

transposase

NC_013854
(Azospirillum sp. B510)

1e-10

4) AZL_027800
( YP_003449962.1 )

transposase

NC_013854
(Azospirillum sp. B510)

4e-09

5) AZL_b05930
( YP_003451800.1 )

transposase

NC_013856
(Azospirillum sp. B510)

7e-09

6) AZL_b06090
( YP_003451816.1 )

transposase

NC_013856
(Azospirillum sp. B510)

7e-09

7) AZL_c03930
( YP_003452230.1 )

transposase

NC_013857
(Azospirillum sp. B510)

7e-09

8) Rvan_2478
( YP_004012792.1 )

IS66 Orf2 family protein

NC_014664
(Rhodomicrobium vannielii ATCC 17100)

4e-07

• Sequence Alignments

1) S2180 in NC_004741


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 70.0 bits (246),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 30/56 (54%), Positives = 50/56 (90%), Gaps = 0/56 (0%)

Query  1   MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKI  56
           MI+LP+GT+IW++AG++DMR +FNG+++++Q+ L +D+FSGH+++FRGR G  VK+
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGDTVKM  56

2) BC1003_0783 in NC_014539


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 66.3 bits (232),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 30/55 (55%), Positives = 46/55 (84%), Gaps = 0/55 (0%)

Query  1   MIGLPSGTRVWLAARVTDMRAGFNSLAAKVQTVLERDPFCGHVFVFRGKRGSLVT  55
           MI+LPSGTR+WL A V+DMR +FN++++++Q VL+ D+F GH+++FRG+RG  V 
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGDTVK  55

3) AZL_f01510 in NC_013860


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 61.6 bits (214),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 43/54 (80%), Gaps = 0/54 (0%)

Query  1   MIPVPAGVRVYLAMGATDMRKGFDGLALLVQEVLKKDPYSGHLFLFRGRRPNRV  54
           MI++P+G R+ L  G +DMRK+F+G++  +Q+VL  D++SGHL++FRGRR + V
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGDTV  54

4) AZL_027920 in NC_013854


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 59.2 bits (205),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 46/56 (83%), Gaps = 0/56 (0%)

Query  1   MISVPAGVRVYLAMGATDMRKGMDGLAMLAQQVLQQDPFAGHLFVFRGRQGHLVKV  56
           MIS+P+G R+ L  G +DMRK+ +G++   Q+VL++D+F+GHL++FRGR+G+ VK+
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGDTVKM  56

5) AZL_027800 in NC_013854


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 54.5 bits (187),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 42/52 (81%), Gaps = 0/52 (0%)

Query  1   MIPVPSGVRVWLATGHTDMRKGWASLALLVQERFAQDPHSGHLFLFRGRRGD  52
           MI++PSG R+WL +G +DMRK+  +++  +Q+ + +D+ SGHL++FRGRRGD
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGD  52

6) AZL_b05930 in NC_013856


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 53.4 bits (183),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 43/52 (83%), Gaps = 0/52 (0%)

Query  1   MIPVPSGVRVWLAGGVTDMRCGMNSLALKVQEGLGRDPHAGDLYVFRGRRGD  52
           MI++PSG R+WL +GV+DMR + N+++ ++Q+ L+ D+ +G+L +FRGRRGD
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGD  52

7) AZL_b06090 in NC_013856


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 53.4 bits (183),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 43/52 (83%), Gaps = 0/52 (0%)

Query  1   MIPVPSGVRVWLAGGVTDMRCGMNSLALKVQEGLGRDPHAGDLYVFRGRRGD  52
           MI++PSG R+WL +GV+DMR + N+++ ++Q+ L+ D+ +G+L +FRGRRGD
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGD  52

8) AZL_c03930 in NC_013857


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 53.4 bits (183),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 43/52 (83%), Gaps = 0/52 (0%)

Query  1   MIPVPSGVRVWLAGGVTDMRCGMNSLALKVQEGLGRDPHAGDLYVFRGRRGD  52
           MI++PSG R+WL +GV+DMR + N+++ ++Q+ L+ D+ +G+L +FRGRRGD
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGRRGD  52

9) Rvan_2478 in NC_014664


> AJ488511|60|G54|24528038|CAD33768.1|Escherichia_coli_536|+|58710..58880|-|-|hypothetical 
protein
Length=56

 Score = 47.7 bits (161),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 22/49 (45%), Positives = 39/49 (80%), Gaps = 0/49 (0%)

Query  1   MIPVPTGVRVWLATGHTDMRRGFPSLSLQVQEVLLREPLSGHLFACGGR  49
           MI++P+G R+WL +G +DMR++F +++ Q+Q+VL  +++SGHL+   GR
Sbjct  1   MISLPSGTRIWLVAGVADMRKSFNGVGGQIQHVLDEDSFSGHLLIFRGR  49