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Homologs of CPR_0319 gene of NC_008262_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CPR_0319
( YP_697648.1 )

lactococcin g processing and transport ATP-binding protein

NC_008262
(Clostridium perfringens SM101)

0.0

100

2) Athe_1399
( YP_002573270.1 )

ABC transporter

NC_012034
(Caldicellulosiruptor bescii DSM 6725)

9e-91

3) LOCK908_2449
( YP_008206926.1 )

Bacteriocin ABC-transporter, ATP-binding and permease component

NC_021725
(Lactobacillus rhamnosus LOCK908)

2e-68

4) MHY_00530
( YP_007833922.1 )

ABC-type multidrug transport system, ATPase and permease components

NC_021041
(Megamonas hypermegale ART12/1)

2e-45

• Sequence Alignments

1) CPR_0319 in NC_008262


> NC_008262_P1|6|G6|110803624|YP_697648.1|Clostridium_perfringens_SM101|+|4561..5928|-|CPR_0319|lactococcin 
g processing and 
transport ATP-binding protein
Length=455

 Score =  641 bits (2421),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 428/428 (100%), Positives = 428/428 (100%), Gaps = 0/428 (0%)

Query  15   LYYQSSLLFRITIVPLILYGIIVFIFKSNIEKVNRETMEGNAKLTSYLVESLNGIATIKA  74
            LYYQSSLLFRITIVPLILYGIIVFIFKSNIEKVNRETMEGNAKLTSYLVESLNGIATIKA
Sbjct  15   LYYQSSLLFRITIVPLILYGIIVFIFKSNIEKVNRETMEGNAKLTSYLVESLNGIATIKA  74

Query  75   FNAEREVNLETEERFIKFLKAIFKNEYINNIQVSLKSLVKGVFAIAILWIGTIQVLNGKI  134
            FNAEREVNLETEERFIKFLKAIFKNEYINNIQVSLKSLVKGVFAIAILWIGTIQVLNGKI
Sbjct  75   FNAEREVNLETEERFIKFLKAIFKNEYINNIQVSLKSLVKGVFAIAILWIGTIQVLNGKI  134

Query  135  SFGELLTFNALLSYFLSPVENIINLQPTLQTAVVAAERlseildleiekseeeykkiNPE  194
            SFGELLTFNALLSYFLSPVENIINLQPTLQTAVVAAERLSEILDLEIEKSEEEYKKINPE
Sbjct  135  SFGELLTFNALLSYFLSPVENIINLQPTLQTAVVAAERLSEILDLEIEKSEEEYKKINPE  194

Query  195  TLKGKIEFKNVDFRYGTRQLILKNINITIDKGERIALVGESGSGKTTLAKLLLNFYQCEN  254
            TLKGKIEFKNVDFRYGTRQLILKNINITIDKGERIALVGESGSGKTTLAKLLLNFYQCEN
Sbjct  195  TLKGKIEFKNVDFRYGTRQLILKNINITIDKGERIALVGESGSGKTTLAKLLLNFYQCEN  254

Query  255  GEIIVNDYNLLDINVETLRDKIAYISQETFLFNGTIIENLMLGNPYLTYEEIIEACKKAQ  314
            GEIIVNDYNLLDINVETLRDKIAYISQETFLFNGTIIENLMLGNPYLTYEEIIEACKKAQ
Sbjct  255  GEIIVNDYNLLDINVETLRDKIAYISQETFLFNGTIIENLMLGNPYLTYEEIIEACKKAQ  314

Query  315  IHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILRNPEILIMDEATSNLDSITEKA  374
            IHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILRNPEILIMDEATSNLDSITEKA
Sbjct  315  IHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILRNPEILIMDEATSNLDSITEKA  374

Query  375  IERTIHEFSKGMTTIIIAHRLSTIKRCDNIYILEKGEIKEKGNHKELLDKKGRYYELWKE  434
            IERTIHEFSKGMTTIIIAHRLSTIKRCDNIYILEKGEIKEKGNHKELLDKKGRYYELWKE
Sbjct  375  IERTIHEFSKGMTTIIIAHRLSTIKRCDNIYILEKGEIKEKGNHKELLDKKGRYYELWKE  434

Query  435  QLPEVDNI  442
            QLPEVDNI
Sbjct  435  QLPEVDNI  442

2) Athe_1399 in NC_012034


> NC_008262_P1|6|G6|110803624|YP_697648.1|Clostridium_perfringens_SM101|+|4561..5928|-|CPR_0319|lactococcin 
g processing and 
transport ATP-binding protein
Length=455

 Score =  327 bits (1228),  Expect = 9e-91, Method: Compositional matrix adjust.
 Identities = 217/376 (58%), Positives = 307/376 (82%), Gaps = 1/376 (0%)

Query  134  LHGIEVVKAFNIEEDVNFKTESkfvkllkdvfkvANLNNLQSNISSAIAAVGVMVILWVG  193
            L+GI  +KAFN E +VN+ TE +F+K+LK +FK   +NN+Q ++ S + +V  + ILW+G
Sbjct  66   LNGIATIKAFNAEREVNLETEERFIKFLKAIFKNEYINNIQVSLKSLVKGVFAIAILWIG  125

Query  194  AHKVINGQMSIGELFTFNALLAYFVDPIKNLIGLQPMLQTAIVAAerlseileleseFQD  253
            + +V+NG++S+GEL+TFNALL+YF+ P+ N+I LQP LQTA+VAAERLSEIL+LE E  +
Sbjct  126  TIQVLNGKISFGELLTFNALLSYFLSPVENIINLQPTLQTAVVAAERLSEILDLEIEKSE  185

Query  254  DEERKLSP-SLKGDIEIEGLNFRYGTRQLVLRDINLKIRRGEKIAIVGESGSGKTTLAKL  312
            +E +K++P +LKG IE+  ++FRYGTRQL+L++IN+ I +GE+IA+VGESGSGKTTLAKL
Sbjct  186  EEYKKINPETLKGKIEFKNVDFRYGTRQLILKNINITIDKGERIALVGESGSGKTTLAKL  245

Query  313  LLGFYDYESGEIRINGYNLKDINKKYLREKIAYISQDIFLFSGTIFENLVLGNRNIKMED  372
            LL FY+ E+GEI +N+YNL DIN   LR+KIAYISQ+ FLF+GTI+ENL+LGN  +  E+
Sbjct  246  LLNFYQCENGEIIVNDYNLLDINVETLRDKIAYISQETFLFNGTIIENLMLGNPYLTYEE  305

Query  373  IIEISRLTTLDEFVSKLPLRYNTMIEENGANLSGGQKQLIAITRALLKNPEIVIMDEATS  432
            IIE  + + +++F++ LPLRYNT++EENG+N+SGGQKQ ++I+RA+L+NPEI+IMDEATS
Sbjct  306  IIEACKKAQIHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILRNPEILIMDEATS  365

Query  433  NLDSVTEQAIGKVVEKVCEGITTIIIAHRLSTILKCDRVVVMHEGRIVEVGTHEELMRKK  492
            NLDS+TE+AI + ++    G+TTIIIAHRLSTI +CD + +++ G I E G H EL+ KK
Sbjct  366  NLDSITEKAIERTIHEFSKGMTTIIIAHRLSTIKRCDNIYILEKGEIKEKGNHKELLDKK  425

Query  493  GYYYNLWREQLMGLEQ  508
            G YY+LW+EQL  +++
Sbjct  426  GRYYELWKEQLPEVDN  441

3) LOCK908_2449 in NC_021725


> NC_008262_P1|6|G6|110803624|YP_697648.1|Clostridium_perfringens_SM101|+|4561..5928|-|CPR_0319|lactococcin 
g processing and 
transport ATP-binding protein
Length=455

 Score =  253 bits (945),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 175/417 (42%), Positives = 291/417 (70%), Gaps = 8/417 (1%)

Query  99   QNGTLFLVSLIAVPCYLVIVFAFQRPFDRLNQETMESNAILSSSIIEDLNGIETIKSLTG  158
            Q++ LF ++++++  Y +IVF F+  ++++N+ETME+NA L+S ++E LNGI TIK++ +
Sbjct  18   QSSLLFRITIVPLILYGIIVFIFKSNIEKVNRETMEGNAKLTSYLVESLNGIATIKAFNA  77

Query  159  ER-VSYERVDREFLTYLKRSFSYTKADQLQQAIKGLLKLALNVVVLWIGASLVIANRMSL  217
            ER V+ E  +R F+ +LK  F     +++Q ++K+L+K  + + +LWIG+  V+  ++S+
Sbjct  78   EREVNLETEER-FIKFLKAIFKNEYINNIQVSLKSLVKGVFAIAILWIGTIQVLNGKISF  136

Query  218  GQMLTFNALLSYFTNPLESIINLQPKLQMARVANNRLNEVYLVESEFKEQR-HLTERHLI  276
            G++LTFNALLSYF +P+E+IINLQP LQ A VA +RL+E+  +E E  E+     + + +
Sbjct  137  GELLTFNALLSYFLSPVENIINLQPTLQTAVVAAERLSEILDLEIEKSEEEYKKINPETL  196

Query  277  EGPIRVRDVSFKYGFGQDVLKNINLEVPENAKYTIVGMSGSGKSTLAKLLVGFYPVDADK  336
             G I  ++V F+YG  Q +LKNIN+ +    + ++VG SGSGK+TLAKLL+ FY  + ++
Sbjct  197  KGKIEFKNVDFRYGTRQLILKNINITIDKGERIALVGESGSGKTTLAKLLLNFY--QCEN  254

Query  337  GTITFNGIPVKDINLTTLRQYIEYVPQDPFIFSGTVLENLTLGSRSDVSEQDLTQaclaa  396
            G I  N+  + DIN+ TLR+ I Y++Q+ F+F+GT++ENL LG+   ++ +++ +AC  A
Sbjct  255  GEIIVNDYNLLDINVETLRDKIAYISQETFLFNGTIIENLMLGNPY-LTYEEIIEACKKA  313

Query  397  eiaadiaNLPQQWQTKLSESGSILSGGQKQRLAIARALLSPAKVLIFDESTSSLDTITER  456
            +I   I +LP + +T + E+GS +SGGQKQRL+IARA+L  + +LI DE+TS+LD+ITE+
Sbjct  314  QIHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILRNPEILIMDEATSNLDSITEK  373

Query  457  KIVDRLLAMT-DRTIIFVAHRLTIAAKTEQIVVMDHGKIVEQGDHATLLAQDG-YYA  511
             I   +   + + T I++AHRL+   + ++I +++ G I E+G+H  LL + G YY 
Sbjct  374  AIERTIHEFSKGMTTIIIAHRLSTIKRCDNIYILEKGEIKEKGNHKELLDKKGRYYE  430

4) MHY_00530 in NC_021041


> NC_008262_P1|6|G6|110803624|YP_697648.1|Clostridium_perfringens_SM101|+|4561..5928|-|CPR_0319|lactococcin 
g processing and 
transport ATP-binding protein
Length=455

 Score =  176 bits (650),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 131/325 (41%), Positives = 222/325 (69%), Gaps = 3/325 (0%)

Query  19   AVIVTVILWFGGYQVVNGALTAGALIAFLTYAVNLANPVKRISRVYGTINKAMAAAERVF  78
            +V+   ILW+G  QV+NG ++ G L++F +    + +PV  I  +  T++ A+ AAER+ 
Sbjct  115  GVFAIAILWIGTIQVLNGKISFGELLTFNALLSYFLSPVENIINLQPTLQTAVVAAERLS  174

Query  79   DVLDTQEDLKDKPEAKELP--KISGKVKFDHVSFGYKDGVNVLHDLSLTANPGQVIAFVG  136
            ++LD + + K   E K +    + GK+ F +V F Y     +L ++++T + G+ IA+VG
Sbjct  175  EILDLEIE-KSEEEYKKINPETLKGKIEFKNVDFRYGTRQLILKNINITIDKGERIALVG  233

Query  137  PSGAGKSTIANLIPRFYDVTEGAitiddidirdvtiKSLREQIGVVPQETMLFSGTIKEN  196
             SG+GK+T+A+L+  FY+  +G I ++D ++ D+ + +LR++I+ ++QET LF+GTI EN
Sbjct  234  ESGSGKTTLAKLLLNFYQCENGEIIVNDYNLLDINVETLRDKIAYISQETFLFNGTIIEN  293

Query  197  IRYGRLdatdeeiieaakaanaHNFIMNLSDGYDTKIGERGITLSGGQRQRMAIARAILK  256
            +  G    T EEIIEA K A+ H+FI +L+  Y+T + E G  +SGGQ+QR++IARAIL+
Sbjct  294  LMLGNPYLTYEEIIEACKKAQIHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILR  353

Query  257  NPRILILDEATSALDTESEEIVQEALDKLMVGRTSFVIAHRLSTIVHADKIVVLDNGRVQ  316
            NP ILI+DEATS LD+ +E  ++ +++ +  G T+++IAHRLSTI + D+I +L++G ++
Sbjct  354  NPEILIMDEATSNLDSITEKAIERTIHEFSKGMTTIIIAHRLSTIKRCDNIYILEKGEIK  413

Query  317  EMGTHQELMQTGGLYSHLYNIQFSN  341
            E G H+EL++  G Y +L + Q+++
Sbjct  414  EKGNHKELLDKKGRYYELWKEQLPE  438