Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
AraC family transcriptional regulator |
NC_017168 (Yersinia pestis A1122) |
2e-93 |
100 |
|
AraC family transcriptional regulator |
NC_008150 (Yersinia pestis Antiqua) |
2e-93 |
100 |
|
AraC family transcriptional regulator |
NC_003143 (Yersinia pestis CO92) |
2e-93 |
100 |
|
putative AraC-family regulatory protein |
NC_017154 (Yersinia pestis D106004) |
2e-93 |
100 |
|
putative AraC-family regulatory protein |
NC_017160 (Yersinia pestis D182038) |
2e-93 |
100 |
|
putative AraC-family regulatory protein |
NC_017265 (Yersinia pestis Harbin 35) |
2e-93 |
100 |
|
type III secretion system component |
NC_004088 (Yersinia pestis KIM) |
2e-93 |
100 |
|
AraC family transcription regulator |
NC_008149 (Yersinia pestis Nepal516) |
2e-93 |
100 |
|
putative AraC-family regulatory protein |
NC_014029 (Yersinia pestis Z176003) |
2e-93 |
100 |
|
AraC family transcriptional regulator |
NC_006155 (Yersinia pseudotuberculosis IP 32953) |
3e-93 |
99 |
|
AraC family transcriptional regulator |
NC_005810 (Yersinia pestis 91001) |
4e-93 |
99 |
|
AraC family transcriptional regulator |
NC_010159 (Yersinia pestis Angola) |
4e-93 |
99 |
|
AraC family transcription regulator |
NC_009381 (Yersinia pestis Pestoides F) |
4e-93 |
99 |
|
AraC family transcriptional regulator |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
4e-93 |
99 |
|
AraC family transcriptional regulator |
NC_010634 (Yersinia pseudotuberculosis PB1/+) |
4e-93 |
99 |
|
AraC family transcriptional regulator |
NC_010465 (Yersinia pseudotuberculosis YPIII) |
4e-93 |
99 |
|
AraC family transcriptional regulator |
NC_008800 (Yersinia enterocolitica 8081) |
6e-73 |
77 |
|
AraC family transcriptional regulator |
NC_015224 (Yersinia enterocolitica 105.5R(r)) |
8e-72 |
76 |
|
type III secretion thermoregulatory protein (LcrF,VirF,transcription regulation of virulence plasmid) |
NC_017564 (Yersinia enterocolitica Y11) |
8e-72 |
76 |
|
AraC family transcriptional regulator |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
2e-56 |
60 |
|
Helix-turn-helix, AraC domain-containing protein |
NC_017571 (Shewanella baltica BA175) |
3e-36 |
41 |
|
Helix-turn-helix, AraC domain-containing protein |
NC_017579 (Shewanella baltica OS117) |
3e-36 |
41 |
|
helix-turn-helix domain-containing protein |
NC_009052 (Shewanella baltica OS155) |
3e-36 |
41 |
|
AraC family transcriptional regulator |
NC_014012 (Shewanella violacea DSS12) |
3e-34 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_003143_P1' AND ph.id_pai_orf='6' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc