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Homologs of ctrA gene of NC_003112_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ctrA
( YP_005877669.1 )

polysialic acid capsule export outer-membrane lipoprotein CtrA

NC_017501
(Neisseria meningitidis 8013)

4e-177

100

2) NMBB_0075
( YP_005881743.1 )

capsule polysaccharide export outer membrane protein

NC_017505
(Neisseria meningitidis alpha710)

4e-177

100

3) ctrA
( YP_974197.1 )

capsule polysaccharide export outer membrane protein

NC_008767
(Neisseria meningitidis FAM18)

4e-177

100

4) NMBG2136_0072
( YP_005892998.1 )

capsule polysaccharide export outer membrane protein CtrA

NC_017513
(Neisseria meningitidis G2136)

4e-177

100

5) NMBH4476_0071
( YP_005898807.1 )

capsule polysaccharide export outer membrane protein CtrA

NC_017516
(Neisseria meningitidis H44/76)

4e-177

100

6) NMBM01240149_0070
( YP_005894923.1 )

capsule polysaccharide export outer membrane protein CtrA

NC_017514
(Neisseria meningitidis M01-240149)

4e-177

100

7) NMBM01240355_0073
( YP_005900769.1 )

capsule polysaccharide export outer membrane protein CtrA

NC_017517
(Neisseria meningitidis M01-240355)

4e-177

100

8) ctrA
( YP_005896864.1 )

capsule polysaccharide export outer membrane protein CtrA

NC_017515
(Neisseria meningitidis M04-240196)

4e-177

100

9) ctrA
( NP_273135.1 )

capsule polysaccharide export outer membrane protein

NC_003112
(Neisseria meningitidis MC58)

4e-177

100

10) ctrA
( YP_005902740.1 )

capsule polysaccharide export outer membrane protein CtrA

NC_017518
(Neisseria meningitidis NZ-05/33)

4e-177

100

11) ctrA
( YP_001598256.1 )

capsule polysaccharide export outer membrane protein

NC_010120
(Neisseria meningitidis 053442)

5e-176

12) ctrA
( YP_005892895.1 )

capsule export outer-membrane lipoprotein CtrA

NC_017512
(Neisseria meningitidis WUE 2594)

1e-163

13) NMA0198
( YP_002341741.1 )

capsule polysaccharide export outer membrane protein

NC_003116
(Neisseria meningitidis Z2491)

8e-164

14) WQG_4200
( YP_007547491.1 )

Capsule polysaccharide export protein BexD

NC_020515
(Bibersteinia trehalosi USDA-ARS-USMARC-192)

2e-106

15) F382_08090
( YP_008234455.1 )

sugar ABC transporter substrate-binding protein

NC_021743
(Mannheimia haemolytica D153)

3e-97

16) bexD
( YP_007882371.1 )

capsule polysaccharide export protein BexD

NC_021082
(Mannheimia haemolytica M42548)

3e-97

17) D650_670
( YP_007664849.1 )

Capsule polysaccharide export protein BexD

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

3e-97

18) N220_13955
( YP_008340176.1 )

sugar ABC transporter substrate-binding protein

NC_021883
(Mannheimia haemolytica USMARC_2286)

3e-97

19) HIB_11700
( YP_005179196.1 )

hypothetical protein

NC_016809
(Haemophilus influenzae 10810)

1e-96

20) bexD
( YP_005179211.1 )

polysaccharide export protein BexD

NC_016809
(Haemophilus influenzae 10810)

1e-96

21) J451_07885
( YP_008222919.1 )

sugar ABC transporter substrate-binding protein

NC_021739
(Mannheimia haemolytica D174)

4e-96

22) D648_70
( YP_007667520.1 )

Capsule polysaccharide export protein BexD

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

4e-96

23) bexD
( YP_008543801.1 )

BexD

NC_022356
(Haemophilus influenzae KR494)

6e-96

24) J450_07010
( YP_008220410.1 )

sugar ABC transporter substrate-binding protein

NC_021738
(Mannheimia haemolytica D171)

1e-95

25) APP7_1644
( YP_001969438.1 )

capsule polysaccharide export protein

NC_010939
(Actinobacillus pleuropneumoniae AP76)

3e-93

26) cpxD
( YP_001652611.1 )

HexD, capsule biosynthetic locus protein

NC_010278
(Actinobacillus pleuropneumoniae JL03)

3e-93

27) hexD
( YP_005176728.1 )

protein HexD

NC_016808
(Pasteurella multocida 36950)

1e-89

28) hexD
( YP_005363268.1 )

HexD, capsule biosynthetic locus protein

NC_017027
(Pasteurella multocida HN06)

1e-89

29) NT08PM_0485
( YP_006239387.1 )

protein HexD

NC_017764
(Pasteurella multocida 3480)

9e-90

30) hexD
( NP_245715.1 )

protein HexD

NC_002663
(Pasteurella multocida Pm70)

9e-90

31) ASU2_10110
( YP_006818389.1 )

capsule polysaccharide export protein

NC_018690
(Actinobacillus suis H91-0380)

2e-87

32) cpxD
( YP_001054271.1 )

capsule polysaccharide export protein

NC_009053
(Actinobacillus pleuropneumoniae L20)

3e-87

33) Fraau_2816
( YP_005378833.1 )

periplasmic protein involved in polysaccharide export

NC_017033
(Frateuria aurantia DSM 6220)

2e-69

34) PP1Y_Lpl773
( YP_004532667.1 )

polysaccharide export protein

NC_015579
(Novosphingobium sp. PP1Y)

6e-69

35) GBP346_A3433
( YP_002898107.1 )

capsule polysaccharide export protein, BexD/CtrA/VexA family

NC_012695
(Burkholderia pseudomallei MSHR346)

9e-66

36) Glov_1533
( YP_001951769.1 )

polysaccharide export protein

NC_010814
(Geobacter lovleyi SZ)

1e-63

37) Cpha266_2347
( YP_912759.1 )

polysaccharide export protein

NC_008639
(Chlorobium phaeobacteroides DSM 266)

2e-53

38) RPSI07_2513
( YP_003753143.1 )

putative capsule polysaccharide export protein bexD

NC_014311
(Ralstonia solanacearum PSI07)

4e-52

39) rkpU/wza
( YP_007549559.1 )

capsular polysaccharide export protein

NC_020516
(Azoarcus sp. KH32C)

8e-46

• Sequence Alignments

1) ctrA in NC_017501


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

2) NMBB_0075 in NC_017505


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

3) ctrA in NC_008767


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

4) NMBG2136_0072 in NC_017513


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

5) NMBH4476_0071 in NC_017516


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

6) NMBM01240149_0070 in NC_017514


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

7) NMBM01240355_0073 in NC_017517


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

8) ctrA in NC_017515


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

9) ctrA in NC_003112


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

10) ctrA in NC_017518


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  614 bits (2319),  Expect = 4e-177, Method: Compositional matrix adjust.
 Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

11) ctrA in NC_010120


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  610 bits (2305),  Expect = 5e-176, Method: Compositional matrix adjust.
 Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%)

Query  1    MFKVKFYIRHAVLLWCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60
            MFKVKFYIRHAVLL CGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAHQTK  120
            QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

12) ctrA in NC_017512


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  569 bits (2149),  Expect = 1e-163, Method: Compositional matrix adjust.
 Identities = 368/391 (95%), Positives = 380/391 (98%), Gaps = 4/391 (1%)

Query  1    MLKLKFCIVISFLILGSA----CSAIPSSGPSAKKVVSLGQQSEAQIPEVELIDVNHAVA  56
            M+K+KF I  + L+L ++    CSAIPSSGPSAKK+VSLGQQSE QIPEVELIDVNH+VA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  57   QSLYKAQVNQSFTQFGDGYASTGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAQQTK  116
            Q LYKAQ+NQSFTQFGDGYAS+GTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSA+QTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  117  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  176
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  177  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  236
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  237  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDTRGV  296
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSD+RGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  297  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  356
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  357  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  387
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

13) NMA0198 in NC_003116


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  569 bits (2150),  Expect = 8e-164, Method: Compositional matrix adjust.
 Identities = 369/391 (95%), Positives = 380/391 (98%), Gaps = 4/391 (1%)

Query  1    MLKLKFCIVISFLILGSA----CSAIPSSGPSAKKVVSLGQQSEAQIPEVELIDVNHAVA  56
            M+K+KF I  + L+L ++    CSAIPSSGPSAKK+VSLGQQSE QIPEVELIDVNH+VA
Sbjct  1    MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA  60

Query  57   QSLYKAQVNQSFTQFGDGYASTGTLNIGDVLDIMIWEAPPAVLFggglssmgsgsAQQTK  116
            Q LYKAQ+NQSFTQFGDGYAS+GTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSA+QTK
Sbjct  61   QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK  120

Query  117  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  176
            LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
Sbjct  121  LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS  180

Query  177  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  236
            VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
Sbjct  181  VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ  240

Query  237  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  296
            NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
Sbjct  241  NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV  300

Query  297  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  356
            FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
Sbjct  301  FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV  360

Query  357  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  387
            SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
Sbjct  361  SNAPLAEVQKFLSFVFSPVTSGANSINNLTN  391

14) WQG_4200 in NC_020515


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  379 bits (1423),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 216/381 (57%), Positives = 304/381 (80%), Gaps = 11/381 (2%)

Query  16   SALLTACSSLPTSGPSHSRVLEVNSNTQ-QTPEVNVVDLDHATVNGMYRLQESQQFSGFA  74
            ++L+ +CS++P+SGPS  +++ +  +++ Q PEV+++D++H+  + +Y+ Q +Q F+ F+
Sbjct  17   GSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFG  76

Query  75   GTGGNAGYA--GMVNVGDVLEISIWEAPPAVLFGGTFDSEGQGSGHLTRLPEQMVNSKGT  132
            +     GYA  G +N+GDVL+I IWEAPPAVLFGG + S G GS+H T+LPEQ+V ++GT
Sbjct  77   D-----GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGT  131

Query  133  VTVPFVGAISVVGKTPEAIQAQIVNRLKRKANQPQVVVRIVNNNSADVTVIRQGNSIRMP  192
            V+VPFVG ISVVGKTP  +Q  I  RLK+ ANQPQV+VR+V+NN+A+V+VIR GNS+RMP
Sbjct  132  VSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMP  191

Query  193  LTANNERVLDAIAAVGGSGADIQDVTIQLTRGNQVKTLPFETLIAEPYQNIALRAGDVVT  252
            LTA  ERVLDA+AAVGGS A++QD  +QLTRGN V+T+++E L+A+P QNI LR GDVVT
Sbjct  192  LTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVT  251

Query  253  MLTTPYSFTGLGAVGNNQQVKFSTKGLTLAEAIGKMGGLIDTRSDPRGIFVFRYVPFGQL  312
            M+T PY+FT++GAVG  Q++ FS++GL+L+EAIG+MGGL D RSD+RG+FVFRY P+ +L
Sbjct  252  MITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVEL  311

Query  313  DMAKQIEWEKHGYGAGMDVPTVYRVNLLEPKSMFLMQRFPMQDKDIVYVSNAPLAEFQKF  372
               +Q  W  +GYG+  ++PTVYRVN+ ++ S+F MQRFP+++KD++YVSNAPLAE QKF
Sbjct  312  PAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKF  371

Query  373  LRMIFSITSPVTSTVNSVHNL  393
            L  +F   SPVTS  NS++NL
Sbjct  372  LSFVF---SPVTSGANSINNL  389

15) F382_08090 in NC_021743


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  348 bits (1308),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 195/374 (53%), Positives = 291/374 (78%), Gaps = 11/374 (2%)

Query  20   ACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMG  79
            +CS++P+SGPS   I++  +++ E Q+PEV+LI +++   Q LY+ Q +Q F+ F++   
Sbjct  22   GCSAIPSSGPSAKKIVSLGQQS-EVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGD---  77

Query  80   VGGYA--GTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVP  137
              GYA  GT+N+GD+L+I IWEAPPAVLFGG +S+ G G++H T+LP+Q+V   GTV+VP
Sbjct  78   --GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVP  135

Query  138  FIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSAN  197
            F+G+I V GKTP  +Q+ I G L + ANQPQ +VR+ +N +++V+VIR GNS+RMPL+A 
Sbjct  136  FVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAA  195

Query  198  NERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADPSQNITLRSGDVIALMNT  257
             ER+LDAVAAVGG++ N++D  V+LTRGN VR++A+E L+A+P QNI LR GDV++++  
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  258  PYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYDN  317
            PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L  + 
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  318  QAQWREKGYAEGMDVPTVYQVNLLKPQSMFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMI  377
            Q +W  +GY+   ++PTVY+VN+  ++S+F +QRFP+++KD++YVSNAPL+E QKFL  +
Sbjct  316  QDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

Query  378  FSITTPITGTANTI  391
            FS   P+T+ AN+I
Sbjct  376  FS---PVTSGANSI  386

16) bexD in NC_021082


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  348 bits (1308),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 195/374 (53%), Positives = 291/374 (78%), Gaps = 11/374 (2%)

Query  20   ACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMG  79
            +CS++P+SGPS   I++  +++ E Q+PEV+LI +++   Q LY+ Q +Q F+ F++   
Sbjct  22   GCSAIPSSGPSAKKIVSLGQQS-EVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGD---  77

Query  80   VGGYA--GTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVP  137
              GYA  GT+N+GD+L+I IWEAPPAVLFGG +S+ G G++H T+LP+Q+V   GTV+VP
Sbjct  78   --GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVP  135

Query  138  FIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSAN  197
            F+G+I V GKTP  +Q+ I G L + ANQPQ +VR+ +N +++V+VIR GNS+RMPL+A 
Sbjct  136  FVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAA  195

Query  198  NERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADPSQNITLRSGDVIALMNT  257
             ER+LDAVAAVGG++ N++D  V+LTRGN VR++A+E L+A+P QNI LR GDV++++  
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  258  PYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYDN  317
            PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L  + 
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  318  QAQWREKGYAEGMDVPTVYQVNLLKPQSMFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMI  377
            Q +W  +GY+   ++PTVY+VN+  ++S+F +QRFP+++KD++YVSNAPL+E QKFL  +
Sbjct  316  QDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

Query  378  FSITTPITGTANTI  391
            FS   P+T+ AN+I
Sbjct  376  FS---PVTSGANSI  386

17) D650_670 in NC_020833


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  348 bits (1308),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 195/374 (53%), Positives = 291/374 (78%), Gaps = 11/374 (2%)

Query  20   ACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMG  79
            +CS++P+SGPS   I++  +++ E Q+PEV+LI +++   Q LY+ Q +Q F+ F++   
Sbjct  22   GCSAIPSSGPSAKKIVSLGQQS-EVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGD---  77

Query  80   VGGYA--GTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVP  137
              GYA  GT+N+GD+L+I IWEAPPAVLFGG +S+ G G++H T+LP+Q+V   GTV+VP
Sbjct  78   --GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVP  135

Query  138  FIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSAN  197
            F+G+I V GKTP  +Q+ I G L + ANQPQ +VR+ +N +++V+VIR GNS+RMPL+A 
Sbjct  136  FVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAA  195

Query  198  NERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADPSQNITLRSGDVIALMNT  257
             ER+LDAVAAVGG++ N++D  V+LTRGN VR++A+E L+A+P QNI LR GDV++++  
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  258  PYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYDN  317
            PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L  + 
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  318  QAQWREKGYAEGMDVPTVYQVNLLKPQSMFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMI  377
            Q +W  +GY+   ++PTVY+VN+  ++S+F +QRFP+++KD++YVSNAPL+E QKFL  +
Sbjct  316  QDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

Query  378  FSITTPITGTANTI  391
            FS   P+T+ AN+I
Sbjct  376  FS---PVTSGANSI  386

18) N220_13955 in NC_021883


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  348 bits (1308),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 195/374 (53%), Positives = 291/374 (78%), Gaps = 11/374 (2%)

Query  20   ACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMG  79
            +CS++P+SGPS   I++  +++ E Q+PEV+LI +++   Q LY+ Q +Q F+ F++   
Sbjct  22   GCSAIPSSGPSAKKIVSLGQQS-EVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGD---  77

Query  80   VGGYA--GTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVP  137
              GYA  GT+N+GD+L+I IWEAPPAVLFGG +S+ G G++H T+LP+Q+V   GTV+VP
Sbjct  78   --GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVP  135

Query  138  FIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSAN  197
            F+G+I V GKTP  +Q+ I G L + ANQPQ +VR+ +N +++V+VIR GNS+RMPL+A 
Sbjct  136  FVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAA  195

Query  198  NERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADPSQNITLRSGDVIALMNT  257
             ER+LDAVAAVGG++ N++D  V+LTRGN VR++A+E L+A+P QNI LR GDV++++  
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  258  PYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYDN  317
            PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L  + 
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  318  QAQWREKGYAEGMDVPTVYQVNLLKPQSMFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMI  377
            Q +W  +GY+   ++PTVY+VN+  ++S+F +QRFP+++KD++YVSNAPL+E QKFL  +
Sbjct  316  QDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

Query  378  FSITTPITGTANTI  391
            FS   P+T+ AN+I
Sbjct  376  FS---PVTSGANSI  386

19) HIB_11700 in NC_016809


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  346 bits (1299),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 202/385 (53%), Positives = 301/385 (79%), Gaps = 11/385 (2%)

Query  9    VCAVLMLGLSACSSLPTSGPSHSAVLEINQGADASELAAKVNVIELNESLVQQIYAAQQS  68
            +C+ L++G   CS++P+SGPS   ++ + Q ++     + V++I++N+++ Q +Y AQ +
Sbjct  15   LCGSLIVG---CSAIPSSGPSAKKIVSLGQQSEVQ--IPEVELIDVNHTVAQLLYKAQIN  69

Query  69   QRFSGFADVRgnggyagavnvgDVLEISIWEAPPAVLFGTTFSSEGQGSGHVTQLPSQIV  128
            Q F+ F+D     + AG++N+GDVL+I IWEAPPAVLFG  +SS G GS+H T+LP Q+V
Sbjct  70   QSFTQFGD---GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLV  126

Query  129  NKNGTVTVPFVGNISVAGKTPEAIQAQIVASLSRKANQPQAVVKIANNNSSDVTVIRQGS  188
               GTV+VPFVG+ISV GKTP  +Q  I + L + ANQPQ +V++ +NN+++V+VIR G+
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGN  186

Query  189  AVRMPLTANDERVLDAVAAIGGSTGNIEDVTVQLTRGNQVKTLAFETLIADPKQNIVLRA  248
            +VRMPLTA +ERVLDAVAA+GGST+N++D  VQLTRGN V+T+A+E L+A+P+QNI+LR 
Sbjct  187  SVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRR  246

Query  249  GDVVSLLNTPYKFTGLGAVGNNQQLRFSSSGITLAEAIGKMGGLIDTRSDPRGVFVFRYM  308
            GDVV+++  PY FT++GAVG  Q++ FS+ G++L+EAIG+MGGL D RSD+RGVFVFRY 
Sbjct  247  GDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYT  306

Query  309  PFAQLDSKAQQEWAAKGYGNGMEVPTVYHANLLQPETMFLLQRFPIQDKDIVYVSNAPLS  368
            P+ +L +  Q+ W A+GYG+  E+PTVY+ N+ +++++F +QRFP+++KD++YVSNAPL+
Sbjct  307  PLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLA  366

Query  369  EFQKFLRIIFSITSPVTSTTNTIRS  393
            E QKFL ++F   SPVTS +N+I +
Sbjct  367  EVQKFLSFVF---SPVTSGANSINN  388

20) bexD in NC_016809


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  346 bits (1299),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 202/385 (53%), Positives = 301/385 (79%), Gaps = 11/385 (2%)

Query  9    VCAVLMLGLSACSSLPTSGPSHSAVLEINQGADASELAAKVNVIELNESLVQQIYAAQQS  68
            +C+ L++G   CS++P+SGPS   ++ + Q ++     + V++I++N+++ Q +Y AQ +
Sbjct  15   LCGSLIVG---CSAIPSSGPSAKKIVSLGQQSEVQ--IPEVELIDVNHTVAQLLYKAQIN  69

Query  69   QRFSGFADVRgnggyagavnvgDVLEISIWEAPPAVLFGTTFSSEGQGSGHVTQLPSQIV  128
            Q F+ F+D     + AG++N+GDVL+I IWEAPPAVLFG  +SS G GS+H T+LP Q+V
Sbjct  70   QSFTQFGD---GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLV  126

Query  129  NKNGTVTVPFVGNISVAGKTPEAIQAQIVASLSRKANQPQAVVKIANNNSSDVTVIRQGS  188
               GTV+VPFVG+ISV GKTP  +Q  I + L + ANQPQ +V++ +NN+++V+VIR G+
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGN  186

Query  189  AVRMPLTANDERVLDAVAAIGGSTGNIEDVTVQLTRGNQVKTLAFETLIADPKQNIVLRA  248
            +VRMPLTA +ERVLDAVAA+GGST+N++D  VQLTRGN V+T+A+E L+A+P+QNI+LR 
Sbjct  187  SVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRR  246

Query  249  GDVVSLLNTPYKFTGLGAVGNNQQLRFSSSGITLAEAIGKMGGLIDTRSDPRGVFVFRYM  308
            GDVV+++  PY FT++GAVG  Q++ FS+ G++L+EAIG+MGGL D RSD+RGVFVFRY 
Sbjct  247  GDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYT  306

Query  309  PFAQLDSKAQQEWAAKGYGNGMEVPTVYHANLLQPETMFLLQRFPIQDKDIVYVSNAPLS  368
            P+ +L +  Q+ W A+GYG+  E+PTVY+ N+ +++++F +QRFP+++KD++YVSNAPL+
Sbjct  307  PLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLA  366

Query  369  EFQKFLRIIFSITSPVTSTTNTIRS  393
            E QKFL ++F   SPVTS +N+I +
Sbjct  367  EVQKFLSFVF---SPVTSGANSINN  388

21) J451_07885 in NC_021739


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  344 bits (1293),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 196/374 (53%), Positives = 289/374 (78%), Gaps = 11/374 (2%)

Query  20   ACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMG  79
            +CS++P+SGPS   I++  +++ E Q+PEV+LI +++   Q LY+ Q +Q F+ F++   
Sbjct  22   GCSAIPSSGPSAKKIVSLGQQS-EVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGD---  77

Query  80   VGGYA--GTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVP  137
              GYA  GT+N+GD+L+I IWEAPPAVLFGG +S+ G G++H T+LP+Q+V   GTV+VP
Sbjct  78   --GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVP  135

Query  138  FIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSAN  197
            F+G+I V GKTP  +Q+ I G L + ANQPQ +VR+ +N +++V+VIR GNS+RMPL+A 
Sbjct  136  FVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAA  195

Query  198  NERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADPSQNITLRSGDVIALMNT  257
             ER+LDAVAAVGG++ N++D  V+LTRGN VR++A+E L+A+P QNI LR GDV++++  
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  258  PYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYTS  317
            PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L    
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  318  QAHWREKGYYEGMDIPTVYQVNLLEPQSIFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMI  377
            Q  W  +GY    +IPTVY+VN+ +++S+F +QRFP+++KD++YVSNAPL+E QKFL  +
Sbjct  316  QDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

Query  378  FSITTPITGTANTI  391
            FS   P+T+ AN+I
Sbjct  376  FS---PVTSGANSI  386

22) D648_70 in NC_020834


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  344 bits (1293),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 196/374 (53%), Positives = 289/374 (78%), Gaps = 11/374 (2%)

Query  20   ACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMG  79
            +CS++P+SGPS   I++  +++ E Q+PEV+LI +++   Q LY+ Q +Q F+ F++   
Sbjct  22   GCSAIPSSGPSAKKIVSLGQQS-EVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGD---  77

Query  80   VGGYA--GTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVP  137
              GYA  GT+N+GD+L+I IWEAPPAVLFGG +S+ G G++H T+LP+Q+V   GTV+VP
Sbjct  78   --GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVP  135

Query  138  FIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSAN  197
            F+G+I V GKTP  +Q+ I G L + ANQPQ +VR+ +N +++V+VIR GNS+RMPL+A 
Sbjct  136  FVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAA  195

Query  198  NERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADPSQNITLRSGDVIALMNT  257
             ER+LDAVAAVGG++ N++D  V+LTRGN VR++A+E L+A+P QNI LR GDV++++  
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  258  PYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYTS  317
            PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L    
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  318  QAHWREKGYYEGMDIPTVYQVNLLEPQSIFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMI  377
            Q  W  +GY    +IPTVY+VN+ +++S+F +QRFP+++KD++YVSNAPL+E QKFL  +
Sbjct  316  QDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

Query  378  FSITTPITGTANTI  391
            FS   P+T+ AN+I
Sbjct  376  FS---PVTSGANSI  386

23) bexD in NC_022356


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  344 bits (1291),  Expect = 6e-96, Method: Compositional matrix adjust.
 Identities = 202/379 (54%), Positives = 294/379 (78%), Gaps = 12/379 (3%)

Query  17   LSACSSLPTSGPSHSAVLDINQGADASELAAKvnvvelnellvQQMYMAQQSQRFSGFAD  76
            + +CS++P+SGPS   ++ + Q ++     + V+++++N+ + Q +Y AQ +Q F+ F+D
Sbjct  20   IVGCSAIPSSGPSAKKIVSLGQQSEVQ--IPEVELIDVNHTVAQLLYKAQINQSFTQFGD  77

Query  77   VSGSSGYA--GAVNVGDVLEISIWEAPPAVLFGTTFSSEGQGSGHVTQLPSQIVNKNGTV  134
                 GYA  G++N+GDVL+I IWEAPPAVLFG  +SS G GS+H T+LP Q+V   GTV
Sbjct  78   -----GYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTV  132

Query  135  TVPFVGNISVAGKTPEVIQAQIVASLRRKANQPQAVVKIANNNSSDVIVIRQGSTVRMPL  194
            +VPFVG+ISV GKTP  +Q  I + L++ ANQPQ +V++ +NN+++V VIR G++VRMPL
Sbjct  133  SVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPL  192

Query  195  TANDERVLDAVAAVGGSTENIEDVTVQLTRGNQVKTLAFETLIADPKQNIVLRAGDVVSL  254
            TA +ERVLDAVAAVGGST N++D  VQLTRGN V+T+A+E L+A+P+QNI+LR GDVV++
Sbjct  193  TAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTM  252

Query  255  LNTPYKFTGLGAVGNNQQLRFSSSGITLAEAIGKMGGLIDTRSDPRGVFVFRYMPFAQLD  314
            +  PY FT++GAVG  Q++ FS+ G++L+EAIG+MGGL D RSD+RGVFVFRY P+ +L 
Sbjct  253  ITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELP  312

Query  315  SKAQQEWAAKGYGNGMEVPTVYRANLLQPETMFLLQRFPIQDKDIVYVSNAPLSEFQKFL  374
            +  Q+ W A+GYG+  E+PTVYR N+ +++++F +QRFP+++KD++YVSNAPL+E QKFL
Sbjct  313  AERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFL  372

Query  375  RMIFSITSPVTSTTNTIRS  393
              +F   SPVTS +N+I +
Sbjct  373  SFVF---SPVTSGANSINN  388

24) J450_07010 in NC_021738


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  343 bits (1286),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 194/369 (53%), Positives = 287/369 (78%), Gaps = 11/369 (2%)

Query  22   PTSGPSYSEVLASNENNAETQLPEVNLIKLDNITVQNLYQAQQSQRFSGFDGSIGVGGYA  81
            P+SGPS   +++  ++ +E Q+PEV+LI +++   Q LY+AQ +Q F+ F++     GYA
Sbjct  27   PSSGPSAKKIVSLGQQ-SEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGD-----GYA  80

Query  82   --GTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVPFIGNI  139
              GT+N+GD+L+I IWEAPPAVLFGG +S+ G G++H T+LP+Q+V   GTV+VPF+G+I
Sbjct  81   SAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDI  140

Query  140  KVAGKTPEAIQNQIVGALSRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSANNERIL  199
             V GKTP  +Q+ I G L + ANQPQ +VR+ +N +++V+VIR GNS+RMPL+A  ER+L
Sbjct  141  SVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVL  200

Query  200  DAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADPSQNITLRSGDVVALMNTPYSFT  259
            DAVAAVGG++ N++D  V+LTRGN VR++A+E L+A+P QNI LR GDVV+++  PY+FT
Sbjct  201  DAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFT  260

Query  260  GLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDDRSDPRGVFVFRHIPFTQLDYDNQAQWR  319
            ++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L  + Q +W 
Sbjct  261  SMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWI  320

Query  320  EKGYAEGMDVPTVYQVNLLKPQSMFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMIFSITT  379
             +GY+   ++PTVY+VN+  ++S+F +QRFP+++KD++YVSNAPL+E QKFL  +FS   
Sbjct  321  AQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFS---  377

Query  380  PITGTANTI  388
            P+T+ AN+I
Sbjct  378  PVTSGANSI  386

25) cpxD in NC_010278


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  335 bits (1257),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 205/392 (53%), Positives = 304/392 (78%), Gaps = 11/392 (2%)

Query  3    IKKYNSIIGLALTTLFLSACSSLPTSGPSHSAILEANSQSSDKPLPEVNVVELDNGLVqq  62
            +K Y     L L   ++ +CS++P+SGPS   I+ + +Q S+  +PEV+++++++ + Q 
Sbjct  4    VKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIV-SLGQQSEVQIPEVELIDVNHTVAQL  62

Query  63   lyqtqqsqqfsgflgtVGSAGYA--GAVNVGDVLEISIWEAPPAVLFGGTFSSEGQGSGH  120
            LY++Q +Q F+ F     + GYA  G++N+GDVL+I IWEAPPAVLFGG +SS G GS+H
Sbjct  63   LYKAQINQSFTQF-----GDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAH  117

Query  121  LTQLPAQMVNQNGTVTVPFVGNIRVAGKTPEAIQSQIIGALQRKANHPQALVKIANNNSA  180
             T+LP Q+V   GTV+VPFVG+I V GKTP  +Q  I G L++ AN+PQ +V++ +NN+A
Sbjct  118  QTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAA  177

Query  181  DVTVIRQGNSIRMPLTANNERVLDAVAAVGGTTENIEDVTVKLTRGSEVKTLAFETLISD  240
            +V+VIR GNS+RMPLTA  ERVLDAVAAVGG+T N++D  V+LTRG+ V+T+A+E L+++
Sbjct  178  NVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVAN  237

Query  241  PAQNIMLRAGDVVSLLNTPYSFTGLGAVGNNQQMKFSSKGITLAEAIGKMGGLIDTRSDP  300
            P QNI+LR GDVV+++  PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+
Sbjct  238  PRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDA  297

Query  301  RGVFVFRHVPFAQLSLEQQAQWQAKGYAIGMDVPTVYRVNLLEPQSMFLLQRFPMQDKDI  360
            RGVFVFR  P+ +L+ E+Q +W A+GY+   ++PTVYRVN+ +++S+F +QRFP+++KD+
Sbjct  298  RGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDV  357

Query  361  VYVSNAPLSEFQKFLRMIFSITSPVTSTTNAV  392
            +YVSNAPL+E QKFL  +F   SPVTS +N++
Sbjct  358  LYVSNAPLAEVQKFLSFVF---SPVTSGANSI  386

26) APP7_1644 in NC_010939


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  335 bits (1257),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 206/392 (53%), Positives = 304/392 (78%), Gaps = 11/392 (2%)

Query  3    IKKYNSIIGLALTTLFLSACSSLPTSGPSHSAILEANSQSSDKPLPEVNVVELDNGLVqq  62
            +K Y     L L   ++ +CS++P+SGPS   I+ + +Q S+  +PEV+++++++ + Q 
Sbjct  4    VKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIV-SLGQQSEVQIPEVELIDVNHTVAQL  62

Query  63   lyqtqqsqqfsgflgtVGSAGYA--GAVNVGDVLEISIWEAPPAVLFGGTFSSEGQGSGH  120
            LY++Q +Q F+ F     + GYA  G++N+GDVL+I IWEAPPAVLFGG +SS G GS+H
Sbjct  63   LYKAQINQSFTQF-----GDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAH  117

Query  121  LTQLPAQMVNQNGTVTVPFVGNIRVAGKTPETIQSQIVGALQRKANQPQALVKIANNNSA  180
             T+LP Q+V   GTV+VPFVG+I V GKTP  +Q  I G L++ ANQPQ +V++ +NN+A
Sbjct  118  QTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAA  177

Query  181  DVTVIRQGNSIRMPLTANNERVLDAVAAVGGTTENIEDVTVKLTRGSEVKTLAFETLISD  240
            +V+VIR GNS+RMPLTA  ERVLDAVAAVGG+T N++D  V+LTRG+ V+T+A+E L+++
Sbjct  178  NVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVAN  237

Query  241  PAQNIMLRAGDVVSLLNTPYSFTGLGAVGNNQQMKFSSKGITLAEAIGKMGGLIDTRSDP  300
            P QNI+LR GDVV+++  PY+FT++GAVG  Q++ FS++G++L+EAIG+MGGL D RSD+
Sbjct  238  PRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDA  297

Query  301  RGVFVFRHVPFAQLSLEQQAQWQAKGYAIGMDVPTVYRVNLLEPQSMFLLQRFPMQDKDI  360
            RGVFVFR  P+ +L+ E+Q +W A+GY+   ++PTVYRVN+ +++S+F +QRFP+++KD+
Sbjct  298  RGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDV  357

Query  361  VYVSNAPLSEFQKFLRMIFSITSPVTSTTNAV  392
            +YVSNAPL+E QKFL  +F   SPVTS +N++
Sbjct  358  LYVSNAPLAEVQKFLSFVF---SPVTSGANSI  386

27) hexD in NC_016808


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  323 bits (1213),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 190/373 (51%), Positives = 293/373 (79%), Gaps = 1/373 (0%)

Query  16   ILAGCHSMPTSGPAQNHIIGLKKPQNKSLPSVDVIEMNDKVAHTLfkqkqsqsftqfkqq  75
            ++ GC ++P+SGP+ + I++L +  +  +P V++I++N+ VA+ L+K + +QSFTQF + 
Sbjct  19   LIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDG  78

Query  76   nsnYADIINVGDTLDVLIWEAAPAILFGSVLSQTGSGGANLTTLPEQIVARNGKITIPFL  135
             ++ A+ +N+GD LD++IWEA+PA+LFG+ LS  GSG+A+ T LPEQ+V+  G +++PF+
Sbjct  79   YAS-AGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFV  137

Query  136  GPILVKGKTPEQIQRDIAHALSSLANKPQVIVRLNKNNSKNVTILRQGNSVRMPLTSQGE  195
            G I V GKTP Q+Q  I   L  +AN+PQV+VRL +NN+ NV+++R GNSVRMPLT+ GE
Sbjct  138  GDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGE  197

Query  196  RVLDAIAAVGGATENLQDISVQLTRGKEVKMLSLEKLATHPEENILLRSNDVVTLLNKPL  255
            RVLDA+AAVGG+T N+QD +VQLTRG+ V+ ++LE L ++P +NILLR  DVVT++ +P 
Sbjct  198  RVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPY  257

Query  256  SFTGLGALGTNKQVKFSANGLTLAEGIGEMGGLLDNRADPKGVFVFRYIPFNKLSLAEQT  315
            +FT++GA+G  +++ FSA GL+L+E+IG MGGL D R+D++GVFVFRY P+  L+   Q 
Sbjct  258  TFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQD  317

Query  316  KWKARGYDNDMEIPTVYSVNLLNPNALFWLQRFPIQDKDLVYVSNAPMAEFQKFLKLVFS  375
            KW A+GY+++ EIPTVY VN+ ++++LF +QRFP+++KD++YVSNAP+AE QKFL +VFS
Sbjct  318  KWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFS  377

Query  376  ITSPVTGTLHNIN  388
              ++ + +++N+ 
Sbjct  378  PVTSGANSINNLT  390

28) hexD in NC_017027


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  323 bits (1211),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 190/373 (51%), Positives = 293/373 (79%), Gaps = 1/373 (0%)

Query  16   ILAGCHSMPTSGPAQNHIIGLKKPQNESLPSVDVIEMNDKVAHTLfkqkqsqsftqfkqq  75
            ++ GC ++P+SGP+ + I++L +  +  +P V++I++N+ VA+ L+K + +QSFTQF + 
Sbjct  19   LIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDG  78

Query  76   nsnYADIINVGDTLDVLIWEAAPAILFGSVLSQTGSGGANLTTLPEQIVARNGKITIPFL  135
             ++ A+ +N+GD LD++IWEA+PA+LFG+ LS  GSG+A+ T LPEQ+V+  G +++PF+
Sbjct  79   YAS-AGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFV  137

Query  136  GPILVKGKTPEQIQRDIAHALSSLANKPQVIVRLNKNNSKNVTILRQGNSVRMPLTSQGE  195
            G I V GKTP Q+Q  I   L  +AN+PQV+VRL +NN+ NV+++R GNSVRMPLT+ GE
Sbjct  138  GDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGE  197

Query  196  RVLDAIAAVGGATENLQDISVQLTRGKEVKMLSLEKLATHPEENILLRSNDVVTLLNKPL  255
            RVLDA+AAVGG+T N+QD +VQLTRG+ V+ ++LE L ++P +NILLR  DVVT++ +P 
Sbjct  198  RVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPY  257

Query  256  SFTGLGALGTNKQVKFSANGLTLAEGIGEMGGLLDNRADPKGVFVFRYIPFNKLSLAEQT  315
            +FT++GA+G  +++ FSA GL+L+E+IG MGGL D R+D++GVFVFRY P+  L+   Q 
Sbjct  258  TFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQD  317

Query  316  KWKARGYDNDMEIPTVYSVNLLNPNALFWLQRFPIQDKDLVYVSNAPMAEFQKFLKLVFS  375
            KW A+GY+++ EIPTVY VN+ ++++LF +QRFP+++KD++YVSNAP+AE QKFL +VFS
Sbjct  318  KWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFS  377

Query  376  ITSPVTGTLHNIN  388
              ++ + +++N+ 
Sbjct  378  PVTSGANSINNLT  390

29) NT08PM_0485 in NC_017764


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  323 bits (1213),  Expect = 9e-90, Method: Compositional matrix adjust.
 Identities = 190/373 (51%), Positives = 293/373 (79%), Gaps = 1/373 (0%)

Query  16   ILAGCHSMPTSGPAQNHIIGLKKPQNESLPSVDVIEMNDKVAHTLfkqkqsqsftqfkqq  75
            ++ GC ++P+SGP+ + I++L +  +  +P V++I++N+ VA+ L+K + +QSFTQF + 
Sbjct  19   LIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDG  78

Query  76   nsnYADIINVGDTLDVLIWEAAPAILFGSVLSQTGSGGANLTTLPEQIVARNGKITIPFL  135
             ++ A+ +N+GD LD++IWEA+PA+LFG+ LS  GSG+A+ T LPEQ+V+  G +++PF+
Sbjct  79   YAS-AGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFV  137

Query  136  GPILVKGKTPEQIQRDIAHALSSLANKPQVIVRLNKNNSKNVTILRQGNSVRMPLTSQGE  195
            G I V GKTP Q+Q  I   L  +AN+PQV+VRL +NN+ NV+++R GNSVRMPLT+ GE
Sbjct  138  GDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGE  197

Query  196  RVLDAIAAVGGATENLQDISVQLTRGKEVKMLSLEKLATHPEENILLRSNDVVTLLNKPL  255
            RVLDA+AAVGG+T N+QD +VQLTRG+ V+ ++LE L ++P +NILLR  DVVT++ +P 
Sbjct  198  RVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPY  257

Query  256  SFTGLGALGTNKQVKFSANGLTLAEGIGEMGGLLDNRADPKGVFVFRYIPFNKLSLAEQT  315
            +FT++GA+G  +++ FSA GL+L+E+IG MGGL D R+D++GVFVFRY P+  L+   Q 
Sbjct  258  TFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQD  317

Query  316  KWKARGYDNDMEIPTVYSVNLLNPNALFWLQRFPIQDKDLVYVSNAPMAEFQKFLKLVFS  375
            KW A+GY+++ EIPTVY VN+ ++++LF +QRFP+++KD++YVSNAP+AE QKFL +VFS
Sbjct  318  KWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFS  377

Query  376  ITSPVTGTLHNIN  388
              ++ + +++N+ 
Sbjct  378  PVTSGANSINNLT  390

30) hexD in NC_002663


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  323 bits (1213),  Expect = 9e-90, Method: Compositional matrix adjust.
 Identities = 190/373 (51%), Positives = 293/373 (79%), Gaps = 1/373 (0%)

Query  16   ILAGCHSMPTSGPAQNHIIGLKKPQNESLPSVDVIEMNDKVAHTLfkqkqsqsftqfkqq  75
            ++ GC ++P+SGP+ + I++L +  +  +P V++I++N+ VA+ L+K + +QSFTQF + 
Sbjct  19   LIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDG  78

Query  76   nsnYADIINVGDTLDVLIWEAAPAILFGSVLSQTGSGGANLTTLPEQIVARNGKITIPFL  135
             ++ A+ +N+GD LD++IWEA+PA+LFG+ LS  GSG+A+ T LPEQ+V+  G +++PF+
Sbjct  79   YAS-AGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFV  137

Query  136  GPILVKGKTPEQIQRDIAHALSSLANKPQVIVRLNKNNSKNVTILRQGNSVRMPLTSQGE  195
            G I V GKTP Q+Q  I   L  +AN+PQV+VRL +NN+ NV+++R GNSVRMPLT+ GE
Sbjct  138  GDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGE  197

Query  196  RVLDAIAAVGGATENLQDISVQLTRGKEVKMLSLEKLATHPEENILLRSNDVVTLLNKPL  255
            RVLDA+AAVGG+T N+QD +VQLTRG+ V+ ++LE L ++P +NILLR  DVVT++ +P 
Sbjct  198  RVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPY  257

Query  256  SFTGLGALGTNKQVKFSANGLTLAEGIGEMGGLLDNRADPKGVFVFRYIPFNKLSLAEQT  315
            +FT++GA+G  +++ FSA GL+L+E+IG MGGL D R+D++GVFVFRY P+  L+   Q 
Sbjct  258  TFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQD  317

Query  316  KWKARGYDNDMEIPTVYSVNLLNPNALFWLQRFPIQDKDLVYVSNAPMAEFQKFLKLVFS  375
            KW A+GY+++ EIPTVY VN+ ++++LF +QRFP+++KD++YVSNAP+AE QKFL +VFS
Sbjct  318  KWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFS  377

Query  376  ITSPVTGTLHNIN  388
              ++ + +++N+ 
Sbjct  378  PVTSGANSINNLT  390

31) ASU2_10110 in NC_018690


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  315 bits (1182),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 176/301 (59%), Positives = 246/301 (82%), Gaps = 3/301 (0%)

Query  92   LEISIWEAPPAVLFGGTFSSEGQGSGHLTQLPAQMVNQNGTVTVPFVGNIRVAGKTPEAI  151
            L+I IWEAPPAVLFGG +SS G GS+H T+LP Q+V   GTV+VPFVG+I V GKTP  +
Sbjct  91   LDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQV  150

Query  152  QSQIVGALQRKANQPQVLVKIANNNSADVTVIRQGNSIRMPLTANNERVLDAVAAVGGTT  211
            Q  I G L++ ANQPQV+V++ +NN+A+V+VIR GNS+RMPLTA  ERVLDAVAAVGG+T
Sbjct  151  QEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGST  210

Query  212  ENIEDVTVKLTRGSQVKTLAFETLISDPAQNIMLRAGDVVSLLNTPYSFTGLGAVGNNQQ  271
             N++D  V+LTRG+ V+T+A+E L+++P QNI+LR GDVV+++  PY+FT++GAVG  Q+
Sbjct  211  ANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQE  270

Query  272  MKFSSKGITLAEAIGKMGGLIDTRSDPRGVFVFRHVPFAQLSLDQQAQWEAKGYGIGMDV  331
            + FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L+ ++Q +W A+GYG   ++
Sbjct  271  IGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEI  330

Query  332  PTVYRVNLLEPQSMFLLQRFPMQDKDIVYVSNAPLSEFQKFLRMIFSVTSPITSTTNSIR  391
            PTVYRVN+ +++S+F +QRFP+++KD++YVSNAPL+E QKFL  +F   SP+TS +NSI 
Sbjct  331  PTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVF---SPVTSGANSIN  387

Query  392  S  392
            +
Sbjct  388  N  388

32) cpxD in NC_009053


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  315 bits (1181),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 176/299 (59%), Positives = 245/299 (82%), Gaps = 3/299 (1%)

Query  93   LEISIWEAPPAVLFGGTFSSEGQGSGHLTQLPAQMVNQNGTVTVPFVGNIRVAGKTPEAI  152
            L+I IWEAPPAVLFGG +SS G GS+H T+LP Q+V   GTV+VPFVG+I V GKTP  +
Sbjct  91   LDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQV  150

Query  153  QSQIVGALQRKANQPQVLVKIANNNSADVTVIRQGNSIRMPLSANNERVLDAVAAVGGTT  212
            Q  I G L++ ANQPQV+V++ +NN+A+V+VIR GNS+RMPL+A  ERVLDAVAAVGG+T
Sbjct  151  QEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGST  210

Query  213  ENIEDVTVKLTRGSQVKTLAFETLISDPAQNIMLRAGDVVSLLNTPYSFTGLGAVGNNQQ  272
             N++D  V+LTRG+ V+T+A+E L+++P QNI+LR GDVV+++  PY+FT++GAVG  Q+
Sbjct  211  ANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQE  270

Query  273  MKFSSKGITLAEAIGKMGGLIDTRSDPRGVFVFRHVPFSQLSLDQQTQWGAKGYGMGMDV  332
            + FS++G++L+EAIG+MGGL D RSD+RGVFVFR  P+ +L+ ++Q +W A+GYG   ++
Sbjct  271  IGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEI  330

Query  333  PTVYRVNLLEPQSLFLLQRFPMQDKDIVYVSNAPLSEFQKFLRMIFSITSPVTSTTNAI  391
            PTVYRVN+ +++SLF +QRFP+++KD++YVSNAPL+E QKFL  +F   SPVTS +N+I
Sbjct  331  PTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVF---SPVTSGANSI  386

33) wcbC in NC_014006


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  264 bits (988),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 162/384 (43%), Positives = 266/384 (70%), Gaps = 18/384 (4%)

Query  26   CLAMALSGCAIMSSSGPSARAVRA-ERDHMVDDAQIKVIDVTDAVARDIIANTPHSSFVE  84
            C ++ + GC+ ++SSGPSA+ + +  ++  V+ +++ +IDV ++VA+ +     + SF +
Sbjct  16   CGSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQ  74

Query  85   DLGEGRPIGSVIGQGDVLDIAIWEAPPATLFgssgsdlrlgsvssgslsrgTPLPEQMVD  144
             +G+G + ++ +  GDVLDI IWEAPPA LFG++ S +  GS         T LPEQ+V 
Sbjct  75   -FGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ------TKLPEQLVT  127

Query  145  SDGQITIPFVGRVQAAGRTPQQIAQTITSRLVGKAHQPQAIVRLSRNAAANVTVVGEVAN  204
            + G +++PFVG +   G+TP Q+ + I +RL   A+QPQ +VRL +N AANV+V+   +N
Sbjct  128  ARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGN  186

Query  205  SARVPLTSRGERILDVLATAGGVRQPVGKMTVQITRGMKVSALPLETVIRDPRQNVRLEP  264
            S R+PLT+ GER+LD +A+ GG    V    VQ+TRG  V +++LE ++ +PRQN+ L  
Sbjct  187  SVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRR  246

Query  265  DDVMTLLYQPYSFTALGAIGKNDEVNFEATGLTLAQALGRIAGLQDARANLKGVFIFRFE  324
            +DV+T++ +PY+FT++GA+G+ +E+ F A GL+L++A+GR++GLQD R++ +GVF+FR+ 
Sbjct  247  GDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYT  306

Query  325  DPAALDPAIRTAARTT----PDGKVPVIYRINMKEPSSLFIAQSFPIRNKDVLYVSNAPL  380
                L PA R   + +    +++ +P +YR+NM ++ SLF  Q FP++NKDVLYVSNAPL
Sbjct  307  PLVEL-PAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPL  365

Query  381  ADIQKFVSVIYSTFLPVATTATTL  404
            A++QKF+S ++S   PV++ A ++
Sbjct  366  AEVQKFLSFVFS---PVTSGANSI  386

34) Bcenmc03_0740 in NC_010508


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  263 bits (984),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 157/386 (41%), Positives = 266/386 (69%), Gaps = 19/386 (4%)

Query  1    MLCCGVVWLAGCSAIPTSGPSRAQIDGAGQARN-NASGIQIVDVTDEVARQLYADRKQTD  59
            +LC +++   GCSAIP+SGPS  +I + GQ  + + + ++++DV + VA+ LY  + +  
Sbjct  14   LLCGSLI--VGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQS  71

Query  60   FFSTLGGGAEFQQQLGTGDTVSVSIWEAPPAALFGAGQQLESASGVNGARVTVLPDQMID  119
            F + +G+G      L  GD + + IWEAPPA LFG+G    ++++ + ++   LP+Q++ 
Sbjct  72   F-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK---LPEQLVT  127

Query  120  ADGNINVPFIGAVKAAGSTSSQLQERIAARLRGMAHNPQVLVKLSKNVTSYVTIVGDVAA  179
            A G ++VPF+G +   G T++Q+QE I +RL+ MA++PQV+V+L +N ++ V+++   + 
Sbjct  128  ARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGN  186

Query  180  SNRMQLTARGERLLDALATAGGVRESINKVTIQVTRGNTVVSQPLEAIIRDPRQNVVLRA  239
            S RM LTA GER+LDA+A+ GG   +++   +Q+TRGN V + +LE ++ +PRQN++LR 
Sbjct  187  SVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRR  246

Query  240  GDVVTALYQPYSFTALGATGKNQEVNFEAQGITLAQALARAGGLEDSRSDAQGVFIFR--  297
            GDVVT + +PY+FT++GA G+ QE+ F A+G++L++A++R GGL+D RSDA+GVF+FR  
Sbjct  247  GDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYT  306

Query  298  ----LEDQNAITWPNSPVRTTADGKVPVIYRVNLRDPNAFFVAQSFMMDNKDLLYVSNAP  353
                L  +    W        +++ +P +YRVN+ D++++F  Q F + NKD+LYVSNAP
Sbjct  307  PLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAP  364

Query  354  VTEIQKVLNLVFSVAYPVVTGVQNFK  379
            ++E+QK L++VFS   PV +G ++++
Sbjct  365  LAEVQKFLSFVFS---PVTSGANSIN  387

35) bgla_1g06940 in NC_015381


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  260 bits (972),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 157/375 (42%), Positives = 265/375 (71%), Gaps = 18/375 (4%)

Query  14   FVCVALLFSGCSTLPNSGPSRSQVMNI-NSGNHDIPGVQLVDVTDDIARQLYREHDRNNF  72
            ++C +L+  GCS++P+SGPS  +++++ + ++ +IP V+L+DV + +A+ LY+ +  ++F
Sbjct  14   LLCGSLI-VGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSF  72

Query  73   AQVFGSKPIFNQKLGIGDVVEISIWEAPPATLFGAGQNLSAAQGIAAPSGSHVTVLPDQA  132
            +Q FG        L IGDV++I IWEAPPA LF      +++ +  +++++H T LP+Q 
Sbjct  73   TQ-FGDGYASAGTLNIGDVLDIMIWEAPPAVLF------GGGLSSMGSGSAHQTKLPEQL  125

Query  133  IDGSGNVNIPFVGDVHAADSTISELQRHIVARLKNMAHDPQVQVRLSRNETSYVTVIGNV  192
            + + G V++PFVGD+   + T +++Q  I +RLK+MA++PQV VRL +N+++ V+VI   
Sbjct  126  VTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RA  184

Query  193  EKSTRMQLTARGERILDALASAGGVRQAVGKETVQLTRNDKLVSMPLDTVIRDPKQNIPL  252
             +S RM LTA GER+LDA+A+ GG    V    VQLTR + + +++L+ ++ +P+QNI L
Sbjct  185  GNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILL  244

Query  253  EAGDVVTALYQPFSFSVIGAAGKSQEVDFETQGITLAQALARSGGLDDTRADAQGVFVFR  312
              GDVVT + +P++F+ +GA G++QE++F ++G++L++A++R GGL+D R+DA+GVFVFR
Sbjct  245  RRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFR  304

Query  313  LEDANALP------WPQTPVRTLSDGRVPVVYRVNLRDPNSFFALQGFLMKDKDLLYVSN  366
                  LP      W        S++ +P VYRVN+ D++S+F++Q F +K+KD+LYVSN
Sbjct  305  YTPLVELPAERQDKWIAQGYG--SEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSN  362

Query  367  APIAELQKVLNLIFS  381
            AP+AE+QK L+++FS
Sbjct  363  APLAEVQKFLSFVFS  377

36) Bcep18194_A3859 in NC_007510


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  259 bits (966),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 163/389 (42%), Positives = 266/389 (69%), Gaps = 21/389 (5%)

Query  18   VTIIVGGVIALSACSTVPTSGPSRSQINSAGAQSNPD--GIQVVDVTDEVARKLYAERGR  75
            V ++ G++I   +CS++P+SGPS  +I S G QS+ +   ++++DV + VA+ LY  +  
Sbjct  12   VLLLCGSLIV--GCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  76   TDFSAILGSDTAFRQQLGVGDGVEISIWEAPPATLFGGGAAETSVTSAPSGARVTTLPAQ  135
              F+  +G + A    L +GD ++I IWEAPPA LF    +    + ++++A+ T LP Q
Sbjct  70   QSFTQ-FGDGYASAGTLNIGDVLDIMIWEAPPAVLF----GGGLSSMGSGSAHQTKLPEQ  124

Query  136  VVDGDGNINVPFVGAVRAAGRTPTQLQNYIVSQLKNKAHDPQVLVRLAKNETSYVTVVGD  195
            +V + G ++VPFVG +   G+TP Q+Q+ I ++LK+ A++PQV+VRL +N+++ V+V+  
Sbjct  125  LVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-R  183

Query  196  VPGSTRMQLSARGERLLDALAAAGGVRQPIDKITLQVTRGNTVASLPLESVIRNPRENVP  255
               S RM L+A GER+LDA+AA GG    ++   +Q+TRGN V +++LE ++ NPR+N+ 
Sbjct  184  AGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNIL  243

Query  256  LRAGDVVTVLFQPYSFTALGATGKNEEVNFEAQGITLAQALGRSGGLQDSRSDAQGVFVF  315
            LR GDVVT++ +PY+FT++GA G+ +E+ F A+G++L++A+GR GGLQD RSDA+GVFVF
Sbjct  244  LRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVF  303

Query  316  RLENASAL------NWPNQPVRTTVDGKVPVIYRINLRDPNSFFVAQSFMMDNKDLLYVS  369
            R      L      +W  Q      ++ +P +YR+N+ D++S+F  Q F + NKD+LYVS
Sbjct  304  RYTPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVS  361

Query  370  NAPVTEIQKVLNLVFSVAYPVVTGVQTFK  398
            NAP++E+QK L++VFS   PV +G ++++
Sbjct  362  NAPLAEVQKFLSFVFS---PVTSGANSIN  387

37) Fraau_2816 in NC_017033


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  256 bits (957),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 158/359 (45%), Positives = 259/359 (73%), Gaps = 14/359 (3%)

Query  25   GIPTSGPSTKDINNVAKQT--KAAGIQIVDVNEAVAQKLLNERQQDDFTRTLGTKPSFQQ  82
            +IP+SGPS+K I ++++Q+  + + ++++DVN++VAQ L + + ++ FT+ +G   +   
Sbjct  25   AIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQ-FGDGYASAG  83

Query  83   QFGIGDTLDISIWEAPPATLFgassadgsamsgtsHVTNLPVQMIDANGKVNVPFAGEIT  142
             + IGD LDI IWEAPPA LFG++ +  ++ S+  H T+LP Q++ A G V+VPF G+I+
Sbjct  84   TLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSA--HQTKLPEQLVTARGTVSVPFVGDIS  141

Query  143  AAGKTAVQLEQLIANRLKGKANQPQVLVRLGRNSNSYVTVMGDIPNSARMELTPKGERIL  202
              GKT+ Q++++I  RLK  ANQPQV+VRL +N+ + V+V+    NS RM LT+ GER+L
Sbjct  142  VVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAAGERVL  200

Query  203  DAVASAGGIRQPINKMTVQVTRGDKVVSLPLETVIREPKENVPLKADDVVTLLYQPYSFT  262
            DAVA+ GG    ++   VQ+TRG+ V +++LE ++ +P++N+ L+ +DVVT++ +PY+FT
Sbjct  201  DAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFT  260

Query  263  TLGAVGQTHEVNFEVQGITLAQALSRSGGLEDSRSDARGVFVFRFEKPDALP------WP  316
            ++GAVG+T+E+ F  +G++L++A++R GGL+D RSDARGVFVFR+     LP      W 
Sbjct  261  SMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWI  320

Query  317  NQPVKARADGRVPVIYRFNLKDPTSLFVAQTFMMDDKDMLYISNAPIADMQKLMNIIFS  375
             Q   + A+  +P +YR N+ D+ SLF  Q F + +KD+LY+SNAP+A++QK+++++FS
Sbjct  321  AQGYGSEAE--IPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFS  377

38) BTI_798 in NC_021173


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  254 bits (947),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 166/391 (43%), Positives = 273/391 (70%), Gaps = 22/391 (5%)

Query  13   LAVSAALLAGCSSIASSGPSRSQIDRAPSHSQDEAQVRANLPAIQVVDVTDGVARQLYVE  72
            L + ++L+ GCS+I+SSGPS  +I     +S+       ++P ++++DV + VA+ LY  
Sbjct  13   LLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE------VQIPEVELIDVNHTVAQLLYKA  66

Query  73   RRHGDFSELLGNDARFQQQLGVGDTIEVSIWEAPPATLFGVAQTSDTKAGATNAKVTVLP  132
            + +  F+++ G++      L +GD +++ IWEAPPA LFG + +S   ++A ++K   LP
Sbjct  67   QINQSFTQF-GDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK---LP  122

Query  133  DQVIDGDGTINVPFAGQIKAVGHTPAELQRIIAARLKNIAHDPQVLVKLSRNATSYVTIV  192
            +Q++ + GT++VPF G+I  VG TP+++Q II +RLK++A++PQV+V+L +N ++ V+++
Sbjct  123  EQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI  182

Query  193  GDVARSDRMPLSARGERLLDALATAGGVRQPVDKMTIQVTRGNVVASLPLESVIRDPRQN  252
               + S RMPL+A GER+LDA+A+ GG    V+   +Q+TRGNVV +++LE ++ +PRQN
Sbjct  183  -RAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQN  241

Query  253  VPLRAGDVVTALFQPYSFTALGATGKNEEINFEAQGITlaqalaragglqDSRSDAMGVF  312
            + LR GDVVT + +PY+FT++GA G+ +EI F A+G++L++A++R GGLQD RSDA GVF
Sbjct  242  ILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVF  301

Query  313  IFR------LEDANALQWPNKPVRTTADGKVPVVYRVNLRDPSSFFVAQSFMMDNKDLLY  366
            +FR      L      +W  +     +++ +P VYRVN+ D+ S+F  Q F + NKD+LY
Sbjct  302  VFRYTPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLY  359

Query  367  VSNAPIAELQKFLNLVFSVAYPVVTGVQTFK  397
            VSNAP+AE+QKFL++VFS   PV +G ++++
Sbjct  360  VSNAPLAEVQKFLSFVFS---PVTSGANSIN  387

39) PP1Y_Lpl773 in NC_015579


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  254 bits (950),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 158/372 (43%), Positives = 261/372 (71%), Gaps = 11/372 (2%)

Query  27   PSSGPSTGQIARAAKAQSAIEAGIAIIDVNDAVAREIVTANRQVPFSESLGEAPPIGSVI  86
            PSSGPS+ +I   ++      + + +IDVN++VA+ +  A+ + +F++ +G++ + ++ +
Sbjct  27   PSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQ-FGDGYASAGTL  85

Query  87   GKGDVLDIAIWEAPPAALFGVAGGVTQLTASGATARGTSLPEQMVDSDGLITVPFVGRIQ  146
              GDVLDI IWEAPPA LFG + +    + ++++A+ T LPEQ+V + G ++VPFVG I 
Sbjct  86   NIGDVLDIMIWEAPPAVLFGGGLS----SMGSGSAHQTKLPEQLVTARGTVSVPFVGDIS  141

Query  147  AAGRTPQEIGRDINRHLIGKAHQPQTIVRLVRNAAANVTVVGDVATSARVPLTARGERVL  206
              G+TP ++   I+ +L   A+QPQ +VRLV+N AANV+V+   + S R+PLTA GERVL
Sbjct  142  VVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAAGERVL  200

Query  207  DVLATAGGVKQPVGKMVIQITRGASVSALPLETVIRDPRQNVRLQPDDVMTLLFQPYSFT  266
            D +A+ GG    V    +Q+TRG  V +++LE ++ +PRQN+ L+ +DV+T++ +PY+FT
Sbjct  201  DAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFT  260

Query  267  ALGAVGRNGELPFEATGLTLAQALGRISGLDDARANAKGAFIFRFERPEALPQNLRQLGR  326
            ++GAVGR  E+ F A GL+L++A+GR++GL+D R++A+G F+FR+     LP + RQ  +
Sbjct  261  SMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAE-RQDKW  319

Query  327  PT----PDGRIPVIYRINLKDPATLFVAQSFPIQDKDVLYVSNAPLADFQKFLGAVFSTI  382
             +    +++ IP +YR+N+ D+ +LF  Q FP+++KDVLYVSNAPLA+ QKFL+ VFS +
Sbjct  320  IAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPV  379

Query  383  LPAATTAAVISQ  394
             ++A +   +++
Sbjct  380  TSGANSINNLTN  391

40) wcbC in NC_011000


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  254 bits (950),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 160/387 (42%), Positives = 269/387 (70%), Gaps = 21/387 (5%)

Query  12   LIAGGVIGLSACSSIPTSGPSRSQISDAGAQNSPQ--GIQIVDLTEQVARRLYAERSNAD  69
            L+ G++I   +CS+IP+SGPS  +I   G Q+  Q   ++++D+ + VA+ LY  + N  
Sbjct  14   LLCGSLI--VGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQS  71

Query  70   FASVLGDDTSFQQQLGVGDVVEVSIWEAPPATLFGGSTADMATGSVPTGARVTKLPVQVI  129
            F+  +GD+ +    L +GDV+++ IWEAPPA LFGG+ + M++     +A+ TKLP Q++
Sbjct  72   FTQ-FGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGS----GSAHQTKLPEQLV  126

Query  130  DGDGNINIPFVGAVKARGRSPSELQAYIAGRLKPIAHDPQVLVQLARNETSYVTVVGDVV  189
             + G +++PFVG +   G++P+++Q  I GRLK +A++PQV+V+L +N+++ V+V+    
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  190  SSTRMQLSARRERVLDALASAGGAKQPVDKVLIQVTRGQAVASEPLQSIIRNPRQNVHLR  249
            +S RM L+A  ERVLDA+A+ GG+   V+   +Q+TRG+ V + +L+ ++ NPRQN+ LR
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  250  AGDVVTALYEPYSLTAFGATGKNAEINFEGQGITLAQAMARAGGLQDSRADVQGVFVFR-  308
             GDVVT + +PY++T+ GA G+  EI F ++G++L++A++R GGLQD R+D +GVFVFR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  309  -----LEDQRALNWPTEPVRTTVDGKVPVIYRVNLKDPNSFFVAQSFMMNNKDLLYVSNA  363
                 L  +R  +W ++      ++ +P +YRVN+ D++S+F  Q F ++NKD+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  364  PITELQKVLNLVFSVAYPIVSGVQTFK  390
            P++E+QK L++VFS   P+ SG ++++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSIN  387

41) Bcen_0287 in NC_008060


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  248 bits (925),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 257/384 (67%), Gaps = 17/384 (4%)

Query  32   LIVGVLAGCSVVPTSGPSTARINQVADSSSNTADAVGIQVVDMTDGVARKLYAERGQTDF  91
            L  +++ GCS +P+SGPS+ +I  +++ S    +   ++++D+ + VA+ LY  + +  F
Sbjct  15   LCGSLIVGCSAIPSSGPSAKKIVSLGQQSE--VQIPEVELIDVNHTVAQLLYKAQINQSF  72

Query  92   ATALGDVAQFRQQLGVGDSIEVSIWEAPPATLFGALQGDSRGGPSNARVTVLPDQTIDGS  151
             T +GD       L +GD +++ IWEAPPA LFG+  +   +G+++   T LP+Q + + 
Sbjct  73   -TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTAR  129

Query  152  GMINVPFVGNVKAVGRTPVQLAADITGRLKNIAHSPQVLVKLSRNATSYVTVVGDVVNSN  211
            G ++VPFVG++  VG+TP Q+   I GRLK++A+ PQV+V+L +N ++ V+V+    NS 
Sbjct  130  GTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSV  188

Query  212  RMQLSARGERLLDALANAGGVRQPIDKITLQVTRGNEVASLPLQTVIRDPRQNVPLRAGD  271
            RM L+A GER+LDA+A  GG    ++   +Q+TRGN V +++L+ ++ +PRQN+ LR GD
Sbjct  189  RMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGD  248

Query  272  VVTALFQPYSFMALGATGKNQEINFEAQGITLAQALARAGGLEDSRSDAKGVFVFR----  327
            VVT + +PY+F ++GA G+ QEI F A+G++L++A++R GGL+D RSDA+GVFVFR    
Sbjct  249  VVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPL  308

Query  328  --MEKANALTWPKSPVRTTVDGKVPVIYRLNLHDPNSFFVSQSFMMDNKDLLYVSNAPIT  385
              +       W         ++ +P +YR+N+ D++S+F  Q F + NKD+LYVSNAP++
Sbjct  309  VELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLA  366

Query  386  DIQKVLNLVFSVAYPVVTGVQTFK  409
            ++QK L++VFS   PV +G ++++
Sbjct  367  EVQKFLSFVFS---PVTSGANSIN  387

42) Bcen2424_0771 in NC_008542


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  248 bits (925),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 257/384 (67%), Gaps = 17/384 (4%)

Query  32   LIVGVLAGCSVVPTSGPSTARINQVADSSSNTADAVGIQVVDMTDGVARKLYAERGQTDF  91
            L  +++ GCS +P+SGPS+ +I  +++ S    +   ++++D+ + VA+ LY  + +  F
Sbjct  15   LCGSLIVGCSAIPSSGPSAKKIVSLGQQSE--VQIPEVELIDVNHTVAQLLYKAQINQSF  72

Query  92   ATALGDVAQFRQQLGVGDSIEVSIWEAPPATLFGALQGDSRGGPSNARVTVLPDQTIDGS  151
             T +GD       L +GD +++ IWEAPPA LFG+  +   +G+++   T LP+Q + + 
Sbjct  73   -TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTAR  129

Query  152  GMINVPFVGNVKAVGRTPVQLAADITGRLKNIAHSPQVLVKLSRNATSYVTVVGDVVNSN  211
            G ++VPFVG++  VG+TP Q+   I GRLK++A+ PQV+V+L +N ++ V+V+    NS 
Sbjct  130  GTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSV  188

Query  212  RMQLSARGERLLDALANAGGVRQPIDKITLQVTRGNEVASLPLQTVIRDPRQNVPLRAGD  271
            RM L+A GER+LDA+A  GG    ++   +Q+TRGN V +++L+ ++ +PRQN+ LR GD
Sbjct  189  RMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGD  248

Query  272  VVTALFQPYSFMALGATGKNQEINFEAQGITLAQALARAGGLEDSRSDAKGVFVFR----  327
            VVT + +PY+F ++GA G+ QEI F A+G++L++A++R GGL+D RSDA+GVFVFR    
Sbjct  249  VVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPL  308

Query  328  --MEKANALTWPKSPVRTTVDGKVPVIYRLNLHDPNSFFVSQSFMMDNKDLLYVSNAPIT  385
              +       W         ++ +P +YR+N+ D++S+F  Q F + NKD+LYVSNAP++
Sbjct  309  VELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLA  366

Query  386  DIQKVLNLVFSVAYPVVTGVQTFK  409
            ++QK L++VFS   PV +G ++++
Sbjct  367  EVQKFLSFVFS---PVTSGANSIN  387

43) bglu_1g06520 in NC_012724


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  245 bits (914),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 162/403 (41%), Positives = 270/403 (67%), Gaps = 30/403 (7%)

Query  14   QHMSLLLRGVTCSVLVSGALVGCSIIPTSGPSRSAIVQSANGSAEATAGMAGIQVVDLTD  73
            +H  LLL    C+ L+    VGCS IP+SGPS   IV  ++   ++   ++ ++++D+ +
Sbjct  9    RHAVLLL----CGSLI----VGCSAIPSSGPSAKKIVSLGQ---QSEVQIPEVELIDVNH  57

Query  74   SIARRLYAEREQGDFATTLGIDTHFRQQLGIGDTIEVSIWEAPPATLFGAAQADTRSSGA  133
            ++A+ LY  + +  F T +G +      L IGD +++ IWEAPPA LFG++ +      +
Sbjct  58   TVAQLLYKAQINQSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLS------S  110

Query  134  SAPSNARVTVLPDQTIDGDGNINVPFVGAVKAQGKTPTQLERDITLRLKNMAHDPQVLVK  193
             ++++A+ T LP+Q + + G ++VPFVG +   GKTP Q++  I  RLK+MA++PQV+V+
Sbjct  111  MGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVR  170

Query  194  LSRNvtsyvtvvgdvvssNRMQLSARGERLLDALASAGGVRQPIDKITLQVTRGDKVASL  253
            L +N ++ V+V+    S  RM L+A GER+LDA+A+ GG    ++   +Q+TRG+ V ++
Sbjct  171  LVQNNAANVSVIRAGNSV-RMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTV  229

Query  254  PLQTVIRDPRQNVPLHAGDVVTALYQPYSFTALGATGKNQEINFEAQGISLAQAIARAGG  313
            +L+ ++ +PRQN+ L+ GDVVT + +PY+FT++GA G+ QEI F A+G+SL++AI+R GG
Sbjct  230  ALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGG  289

Query  314  LEDSRSDAQGVFIFRLEDANALP------WPVKPVRTTADGKVPVIYRMNLKDPSAFFTA  367
            L+D RSDA+GVF+FR      LP      W  +     +++ +P +YR+N+ D+ ++F+ 
Sbjct  290  LQDRRSDARGVFVFRYTPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSM  347

Query  368  QSFVMDNKDLLYVSNAPITELQKVLNLVFSVAYPVVTGVQSFK  410
            Q F + NKD+LYVSNAP++E+QK L++VFS   PV +G +S++
Sbjct  348  QRFPVKNKDVLYVSNAPLAEVQKFLSFVFS---PVTSGANSIN  387

44) BMASAVP1_A0521 in NC_008785


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (910),  Expect = 8e-66, Method: Compositional matrix adjust.
 Identities = 157/376 (42%), Positives = 263/376 (70%), Gaps = 19/376 (5%)

Query  6    LAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNTADFVTALGGG  61
            + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +    F T +G+G
Sbjct  20   IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSF-TQFGDG  78

Query  62   ASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPF  121
             +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q + + G V++PF
Sbjct  79   YASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTARGTVSVPF  136

Query  122  AGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVAENARMALTAR  181
             G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +++ RM+LTA 
Sbjct  137  VGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAA  195

Query  182  GERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLHAGDVVTVLFQ  241
            GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+ GDVVT++ +
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  242  PYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR------LEDAN  295
            PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR      L    
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  296  ALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLN  355
              KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNAP+AE+QKFL+
Sbjct  316  QDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLS  373

Query  356  VVFSVAYPVITGVQTV  371
             VFS   PV +G +++
Sbjct  374  FVFS---PVTSGANSI  386

45) BURPS1106A_3289 in NC_009076


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (910),  Expect = 8e-66, Method: Compositional matrix adjust.
 Identities = 157/376 (42%), Positives = 263/376 (70%), Gaps = 19/376 (5%)

Query  6    LAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNTADFVTALGGG  61
            + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +    F T +G+G
Sbjct  20   IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSF-TQFGDG  78

Query  62   ASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPF  121
             +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q + + G V++PF
Sbjct  79   YASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTARGTVSVPF  136

Query  122  AGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVAENARMALTAR  181
             G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +++ RM+LTA 
Sbjct  137  VGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAA  195

Query  182  GERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLHAGDVVTVLFQ  241
            GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+ GDVVT++ +
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  242  PYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR------LEDAN  295
            PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR      L    
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  296  ALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLN  355
              KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNAP+AE+QKFL+
Sbjct  316  QDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLS  373

Query  356  VVFSVAYPVITGVQTV  371
             VFS   PV +G +++
Sbjct  374  FVFS---PVTSGANSI  386

46) BPC006_I3337 in NC_018527


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (910),  Expect = 8e-66, Method: Compositional matrix adjust.
 Identities = 157/376 (42%), Positives = 263/376 (70%), Gaps = 19/376 (5%)

Query  6    LAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNTADFVTALGGG  61
            + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +    F T +G+G
Sbjct  20   IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSF-TQFGDG  78

Query  62   ASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPF  121
             +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q + + G V++PF
Sbjct  79   YASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTARGTVSVPF  136

Query  122  AGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVAENARMALTAR  181
             G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +++ RM+LTA 
Sbjct  137  VGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAA  195

Query  182  GERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLHAGDVVTVLFQ  241
            GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+ GDVVT++ +
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  242  PYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR------LEDAN  295
            PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR      L    
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  296  ALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLN  355
              KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNAP+AE+QKFL+
Sbjct  316  QDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLS  373

Query  356  VVFSVAYPVITGVQTV  371
             VFS   PV +G +++
Sbjct  374  FVFS---PVTSGANSI  386

47) BDL_2637 in NC_021884


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (910),  Expect = 8e-66, Method: Compositional matrix adjust.
 Identities = 157/376 (42%), Positives = 263/376 (70%), Gaps = 19/376 (5%)

Query  6    LAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNTADFVTALGGG  61
            + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +    F T +G+G
Sbjct  20   IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSF-TQFGDG  78

Query  62   ASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPF  121
             +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q + + G V++PF
Sbjct  79   YASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTARGTVSVPF  136

Query  122  AGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVAENARMALTAR  181
             G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +++ RM+LTA 
Sbjct  137  VGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAA  195

Query  182  GERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLHAGDVVTVLFQ  241
            GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+ GDVVT++ +
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  242  PYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR------LEDAN  295
            PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR      L    
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  296  ALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLN  355
              KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNAP+AE+QKFL+
Sbjct  316  QDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLS  373

Query  356  VVFSVAYPVITGVQTV  371
             VFS   PV +G +++
Sbjct  374  FVFS---PVTSGANSI  386

48) BMA2307 in NC_006348


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 269/386 (70%), Gaps = 22/386 (5%)

Query  10   LIACVMGAVTLAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNT  65
            L+ C  G++ + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +  
Sbjct  13   LLLC--GSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  66   ADFVTALGGGASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAI  125
              F T +G+G +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q +
Sbjct  70   QSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLV  126

Query  126  DGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVA  185
             + G V++PF G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  186  ENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLH  245
            ++ RM+LTA GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  246  AGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR-  304
             GDVVT++ +PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  305  -----LEDANALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNA  359
                 L      KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  360  PIAELQKFLNVVFSVAYPVITGVQTV  385
            P+AE+QKFL+ VFS   PV +G +++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSI  386

49) BMA10229_A1078 in NC_008836


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 157/376 (42%), Positives = 263/376 (70%), Gaps = 19/376 (5%)

Query  11   LAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNTADFVTALGGG  66
            + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +    F T +G+G
Sbjct  20   IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSF-TQFGDG  78

Query  67   ASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPF  126
             +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q + + G V++PF
Sbjct  79   YASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTARGTVSVPF  136

Query  127  AGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVAENARMALTAR  186
             G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +++ RM+LTA 
Sbjct  137  VGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAA  195

Query  187  GERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLHAGDVVTVLFQ  246
            GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+ GDVVT++ +
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  247  PYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR------LEDAN  300
            PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR      L    
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  301  ALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLN  360
              KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNAP+AE+QKFL+
Sbjct  316  QDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLS  373

Query  361  VVFSVAYPVITGVQTV  376
             VFS   PV +G +++
Sbjct  374  FVFS---PVTSGANSI  386

50) BMA10247_2185 in NC_009080


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 269/386 (70%), Gaps = 22/386 (5%)

Query  10   LIACVMGAVTLAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNT  65
            L+ C  G++ + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +  
Sbjct  13   LLLC--GSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  66   ADFVTALGGGASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAI  125
              F T +G+G +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q +
Sbjct  70   QSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLV  126

Query  126  DGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVA  185
             + G V++PF G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  186  ENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLH  245
            ++ RM+LTA GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  246  AGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR-  304
             GDVVT++ +PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  305  -----LEDANALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNA  359
                 L      KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  360  PIAELQKFLNVVFSVAYPVITGVQTV  385
            P+AE+QKFL+ VFS   PV +G +++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSI  386

51) wcbC in NC_017831


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 269/386 (70%), Gaps = 22/386 (5%)

Query  10   LIACVMGAVTLAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNT  65
            L+ C  G++ + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +  
Sbjct  13   LLLC--GSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  66   ADFVTALGGGASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAI  125
              F T +G+G +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q +
Sbjct  70   QSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLV  126

Query  126  DGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVA  185
             + G V++PF G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  186  ENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLH  245
            ++ RM+LTA GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  246  AGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR-  304
             GDVVT++ +PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  305  -----LEDANALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNA  359
                 L      KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  360  PIAELQKFLNVVFSVAYPVITGVQTV  385
            P+AE+QKFL+ VFS   PV +G +++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSI  386

52) wcbC in NC_007434


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 269/386 (70%), Gaps = 22/386 (5%)

Query  10   LIACVMGAVTLAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNT  65
            L+ C  G++ + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +  
Sbjct  13   LLLC--GSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  66   ADFVTALGGGASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAI  125
              F T +G+G +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q +
Sbjct  70   QSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLV  126

Query  126  DGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVA  185
             + G V++PF G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  186  ENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLH  245
            ++ RM+LTA GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  246  AGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR-  304
             GDVVT++ +PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  305  -----LEDANALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNA  359
                 L      KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  360  PIAELQKFLNVVFSVAYPVITGVQTV  385
            P+AE+QKFL+ VFS   PV +G +++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSI  386

53) BURPS668_3254 in NC_009074


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 269/386 (70%), Gaps = 22/386 (5%)

Query  10   LIACVMGAVTLAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNT  65
            L+ C  G++ + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +  
Sbjct  13   LLLC--GSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  66   ADFVTALGGGASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAI  125
              F T +G+G +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q +
Sbjct  70   QSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLV  126

Query  126  DGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVA  185
             + G V++PF G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  186  ENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLH  245
            ++ RM+LTA GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  246  AGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR-  304
             GDVVT++ +PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  305  -----LEDANALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNA  359
                 L      KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  360  PIAELQKFLNVVFSVAYPVITGVQTV  385
            P+AE+QKFL+ VFS   PV +G +++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSI  386

54) wcbC in NC_006350


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 269/386 (70%), Gaps = 22/386 (5%)

Query  10   LIACVMGAVTLAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNT  65
            L+ C  G++ + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +  
Sbjct  13   LLLC--GSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  66   ADFVTALGGGASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAI  125
              F T +G+G +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q +
Sbjct  70   QSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLV  126

Query  126  DGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVA  185
             + G V++PF G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  186  ENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLH  245
            ++ RM+LTA GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  246  AGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR-  304
             GDVVT++ +PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  305  -----LEDANALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNA  359
                 L      KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  360  PIAELQKFLNVVFSVAYPVITGVQTV  385
            P+AE+QKFL+ VFS   PV +G +++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSI  386

55) GBP346_A3433 in NC_012695


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  244 bits (909),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 160/386 (42%), Positives = 269/386 (70%), Gaps = 22/386 (5%)

Query  10   LIACVMGAVTLAGCSSIPTSGASGAQIARAAQSP----SGIQIVDVTEDVARQLFADRNT  65
            L+ C  G++ + GCS+IP+SG+S+ +I   +Q +    + ++++DV + VA+ L+  +  
Sbjct  13   LLLC--GSL-IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQIN  69

Query  66   ADFVTALGGGASFRQQLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAI  125
              F T +G+G +    L +GD +++ IWEAPPA LFG++ S  +SG+A+   T LP+Q +
Sbjct  70   QSF-TQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLV  126

Query  126  DGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNETSYVTVVGDVA  185
             + G V++PF G++   G++P Q+   I +RLK MA++PQV+V+L +N+++ V+V+   +
Sbjct  127  TARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAG  185

Query  186  ENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLH  245
            ++ RM+LTA GER+LDA+A+ GG+   V+   +Q+TRG+ V +++L+ ++ +PRQN+ L+
Sbjct  186  NSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLR  245

Query  246  AGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITlaqalaragglqDSRADAKGVFIFR-  304
             GDVVT++ +PY+FT +GA G+ +EI F A+G++L++A++R GGLQD R+DA+GVF+FR 
Sbjct  246  RGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRY  305

Query  305  -----LEDANALKWPTAPVRTTADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNA  359
                 L      KW +      +++ +P VYRVN+ D++S+F  Q F V N+D+LYVSNA
Sbjct  306  TPLVELPAERQDKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNA  363

Query  360  PIAELQKFLNVVFSVAYPVITGVQTV  385
            P+AE+QKFL+ VFS   PV +G +++
Sbjct  364  PLAEVQKFLSFVFS---PVTSGANSI  386

56) Rpic_1161 in NC_010682


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  241 bits (898),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 156/362 (44%), Positives = 247/362 (69%), Gaps = 9/362 (2%)

Query  19   LTACSSVPSSGPT-RSQvtdaatdasvtaGIQIVDVTEEVAQRLLAERQTADFARTLggg  77
            + +CS++PSSGP+ +  V+ +       + ++++DV + VAQ L   +    F++ +G+G
Sbjct  20   IVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQ-FGDG  78

Query  78   aqfqqqlgvgDVIEVSVWEAPPATLFGATGMDPRVAPSNARVSVLPEQMISGDGYINVPF  137
                  L +GDV+++ +WEAPPA LFG+       ++++   + LPEQ++++ G ++VPF
Sbjct  79   YASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQ--TKLPEQLVTARGTVSVPF  136

Query  138  AGQIKAAGRTTTQLEKDITAALKGKANQPQVLVRLSKNVTSYVTVVGDVATSTRMQLTAR  197
             G+I   G+T  Q++  I + LK  ANQPQV+VRL +N ++ V+V+   + S RM LTA 
Sbjct  137  VGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAA  195

Query  198  GERLLDAVASAGGVRQPVDKITIQVTRGNAAQTLPLQTIIRDPRQNVPLRAGDVVTALFQ  257
            GER+LDAVA+ GG    V+   +Q+TRGN  +T++L+ ++ +PRQN+ LR GDVVT + +
Sbjct  196  GERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITN  255

Query  258  PLSFTALGATGKNQEINFEAQGITLAQAIARAGGLEDSRADARGVFIFRFEDANALPWPR  317
            P +FT++GA G+ QEI F A+G++L++AI+R GGL+D R+DARGVF+FR+     LP  R
Sbjct  256  PYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAER  315

Query  318  QPVRTTQ----NGKVPVVYRLNLKDPGSFFVAQTFVMDNKDLLYVSNAPIAELQKFLNVV  373
            Q  + +Q    ++ +P VYR+N+ D+ S+F  Q F + NKD+LYVSNAP+AE+QKFL+ V
Sbjct  316  QDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

Query  374  FS  375
            FS
Sbjct  376  FS  377

57) BTH_I1327 in NC_007651


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  238 bits (889),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 156/356 (44%), Positives = 252/356 (71%), Gaps = 16/356 (4%)

Query  73   QVRANLPAIQVVDVTDGVARQLYTERRHGDFSSLLGNDARFQQQLGVGDTIEVSIWEAPP  132
            Q   ++P ++++DV + VA+ LY  + +  F+ + G++      L +GD +++ IWEAPP
Sbjct  42   QSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQF-GDGYASAGTLNIGDVLDIMIWEAPP  100

Query  133  ATLFGVAQTSDAKAGATNAKVTVLPDQVIDGDGTINVPFAGQIKAVGHTPAELQRIIAAR  192
            A LFG + +S + ++A ++K   LP+Q++ + GT++VPF G+I  VG TP+++Q II +R
Sbjct  101  AVLFGGGLSSMGSGSAHQTK---LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGR  157

Query  193  LKNIAHDPQVLVKLSRNATSYVTIVGDVAKSDRMPLSARGERLLDALAAAGGVRQPVDKI  252
            LK++A++PQV+V+L +N ++ V+++   ++S RMPL+A GER+LDA+AA GG    V+  
Sbjct  158  LKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDT  216

Query  253  TIQVTRGNVVASLPLESVIRDPRQNVPLRAGDVVTALFQPYSFTALGATGKNEEINFEAQ  312
             +Q+TRGNVV +++LE ++ +PRQN+ LR GDVVT + +PY+FT++GA G+ +EI F A+
Sbjct  217  NVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR  276

Query  313  GITLaqalaragglqdarSDATGVFIFR------LEDANALKWPNTPVRTTADGKVPVVY  366
            G++L++A++R GGLQD RSDA GVF+FR      L      KW        +++ +P VY
Sbjct  277  GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQG--YGSEAEIPTVY  334

Query  367  RVNLRDPSSFFVAQSFMMDNKDLLYVSNAPIAELQKFLNLVFSVAYPVVTGVQTFK  422
            RVN+ D+ S+F  Q F + NKD+LYVSNAP+AE+QKFL++VFS   PV +G ++++
Sbjct  335  RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFS---PVTSGANSIN  387

58) Glov_1533 in NC_010814


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 150/363 (42%), Positives = 255/363 (71%), Gaps = 15/363 (4%)

Query  30   GCVGWLPSSGPSVSEVK--DAAGSQRLSGIQLVDLNDSVARRLLAQRKQELFSEKIGVGK  87
            GC + +PSSGPS   +   +  +  +++ ++L+D+N++VA+ L   + ++ F++ +G G 
Sbjct  22   GCSA-IPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQ-FGDGY  79

Query  88   PVNWLIGVGDVVEVSVWEAPPGTLFSPSMSDLKSAPASSRVTPFPEQMVDSDGLITIPFA  147
            +    + +GDV+++ +WEAPP+ LF+ ++S    +++S++ T +PEQ+V + G +++PF 
Sbjct  80   ASAGTLNIGDVLDIMIWEAPPAVLFGGGLS--SMGSGSAHQTKLPEQLVTARGTVSVPFV  137

Query  148  GKIMVAGRSPQQVEADIVERLKGLANQPQVLVRVLRNNYATVTVVGEVANSSRIPLTPRG  207
            G I V G++P QV+  I  RLK +ANQPQV+VR+++NN A V+V+   +NS R+PLT+ G
Sbjct  138  GDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAAG  196

Query  208  ERLLDALASAGGVRQPVNKMTVQVTRGDLVQSMPLETVIRDPRQNITLQPGDVLTALYQP  267
            ER+LDA+A+ GG    V+   VQ+TRG++V++++LE ++ +PRQNI L+ GDV+T + +P
Sbjct  197  ERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNP  256

Query  268  SSFTILGATGKNEEVNFEAQGISLAQALARGGGLQDSRANAQGVFVFRLESADAL-----  322
             +FT +GA G+ +E+ F A+G+SL++A++R GGLQD R++A+GVFVFR  +   L     
Sbjct  257  YTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQ  316

Query  323  -DWPAKPVRTTPDGKVPVIYRADLNDPASFFIAQSFPVHNKDVLYVANAPSVELQKFLNI  381
              W A+     +++ +P +YR ++ D+ S+F  Q FPV NKDVLYV+NAP  E+QKFL++
Sbjct  317  DKWIAQG--YGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSF  374

Query  382  IMT  384
            + +
Sbjct  375  VFS  377

59) Cpha266_2347 in NC_008639


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  202 bits (752),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 146/357 (41%), Positives = 252/357 (71%), Gaps = 17/357 (4%)

Query  2    LPGSGPKTGSVMD-ADRSE-RLRNIKVIDLSqqvvtqlaqaqqqllFSEVFNTVQQPNLL  59
            +P+SGP +  ++  +++SE ++ ++ +ID+++ V   L +AQ +  F++ F     +   
Sbjct  26   IPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQ-FGDGYASAGT  84

Query  60   IGAGDILEVSIWEVPPA-LFSGVFIDQRSGAGATQKITFPEQMVTQDGTINIPFAGHIPV  118
            +  GD+L++ IWE PPA LF+G       G+G++++  +PEQ+VT  GT+++PF G+I+V
Sbjct  85   LNIGDVLDIMIWEAPPAVLFGGG--LSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISV  142

Query  119  TGKTTRQIESVITGRLNGKANQPQvlvrtvrnntanvtvvGEVASSTRMPLTSRTERLLD  178
             GKT  Q++ +I GRL+  ANQPQV+VR V+NN+ANV+V+   ++S RMPLT+  ER+LD
Sbjct  143  VGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAAGERVLD  201

Query  179  ALAAAGGVRQPVSKMTLQLTRGKTVQAMPLDHIIRDPLQNVVLQSDDVVTLMHQPLSFTA  238
            A+AA GG    V    +QLTRG+ V++++L++++ +P QN++L+ +DVVT++ +P +FT+
Sbjct  202  AVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTS  261

Query  239  FGATGKNEEVNFEAQGISLAQALARVGGIQDNRADAKGVFVFRF-------GQKAEEGLT  291
             GA G+ +E+ F A+G+SL++A++R+GG+QD R+DA+GVFVFR+       +++ +  ++
Sbjct  262  MGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIA  321

Query  292  AGMPGASSLYKQPVIYSVNLRDPASFFLAQNFMMQNKDILYVSNAPSSDLQKFLNMV  348
             G  + + +   P +Y VN+ D+ S+F  Q F ++NKD+LYVSNAP +++QKFL+ V
Sbjct  322  QGYGSEAEI---PTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375

60) RPSI07_2513 in NC_014311


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  199 bits (738),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 152/366 (42%), Positives = 254/366 (70%), Gaps = 11/366 (3%)

Query  35   LPSAGPSRAQIEQAPAAPASN--SVQIVAITDGVTRRLLASRQQVMLSSAFGEPSRPGYV  92
            +PS+GPS  +I      +  +   V+++ + + V++ L  ++ +  ++  FG+   ++  
Sbjct  26   IPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQ-FGDGYASAGT  84

Query  93   IGAGDMVEVSVWEAPPAVLFGGALPDsrtttstlrattlPEQMVSADGTIDVPFASRIRA  152
            +  GD++++ +WEAPPAVLFGG+   S   +++ + T LPEQ+V+A GT+ VPF + I  
Sbjct  85   LNIGDVLDIMIWEAPPAVLFGGG--LSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISV  142

Query  153  AGRTPQQVSTEIVQHLRRKANDPQvlvrvtnnntanvtvvgevnRSLRMPLTAKGERLLD  212
             G+TP QV   I  +L++ AN+PQV+VR+ +NN+ANV+V+     S+RMPLTA GER+LD
Sbjct  143  VGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIRAG-NSVRMPLTAAGERVLD  201

Query  213  ALAAAGGVRQPVNKMTLQVARAGRVQAMPLEAIIRDPQQNIVLQPGDVVTALYQPLSFTV  272
            A+AA GG    V+   +Q++R+  V++++LE ++ +P+QNI+L+ GDVVT + +P +FT 
Sbjct  202  AVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTS  261

Query  273  LGAAGKNEEINFEAQGISLAQALARTGGLQDIRADARGVFLFRFESPEVLGL--HDK-VP  329
            +GA G+ +EI F A+G+SL++A++R GGLQD R+DARGVF+FR+ +   L    +DK ++
Sbjct  262  MGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIA  321

Query  330  A--TPEGKVPVVYQADLKDPATFFVAQNFPVQNGDVLYVSNAPAAELQKFLNILTSSIYS  387
                +E+ +P VY+ ++ D+ ++F  Q FPV+N DVLYVSNAP AE+QKFL+++ S++ S
Sbjct  322  QGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTS  381

Query  388  VSNAVA  393
             +N++ 
Sbjct  382  GANSIN  387

61) rkpU/wza in NC_020516


> NC_003112_P1|6|G6|15676007|NP_273135.1|Neisseria_meningitidis_MC58|+|4689..5864|ctrA|NMB0071|capsule 
polysaccharide export 
outer membrane protein
Length=391

 Score =  177 bits (656),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 140/333 (43%), Positives = 240/333 (73%), Gaps = 14/333 (4%)

Query  9    VQIVDISDGLAR---RLQESDKRLRFSEVLSTQGVESYLIGPGDVVQVSIWEAPPAALFG  65
            V+++D+++ +A+   + Q ++   +F++  ++ G     +  GDV+++ IWEAPPA LFG
Sbjct  50   VELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGT----LNIGDVLDIMIWEAPPAVLFG  105

Query  66   ATMLDarangagtatttLPEQMVASDGTITIPFAGVIAAGGSSPQQIEREITKRLTGQAN  125
            + +  +   ++++  T LPEQ+V++ GT+++PF G I+  G +P Q++  I  RL   AN
Sbjct  106  GGL--SSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMAN  163

Query  126  QPQvlvrvvrnntsnvtvvGDVASSTRMPLTARGERLLDALAAAGGVRQPVGKMTIQVTR  185
            QPQV+VR+V+NN++NV+V+   ++S RMPLTA GER+LDA+AA GG    V    +Q+TR
Sbjct  164  QPQVMVRLVQNNAANVSVI-RAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTR  222

Query  186  GSLVNAMPLDQIIQDPHQNIILRPGDVVTALHQPLSLTVLGATGKNEDIPFEANGITlaq  245
            G++V +++L++++ +P+QNI+LR GDVVT + +P ++T +GA G+ ++I F A G++L++
Sbjct  223  GNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSE  282

Query  246  alaragglqdaradargVFLFRFEDPSVLGAQGSNSLLT----PDNKVPVVYRVDLTDPR  301
            A++R GGLQD R+DARGVF+FR+     L A+  +  ++    ++  +P VYRV+++D++
Sbjct  283  AIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAH  342

Query  302  SFFIAQGFPVRNKDVMYVANAPASELQKFLNIL  334
            S+F  Q FPV+NKDV+YV+NAP +E+QKFL+++
Sbjct  343  SLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFV  375