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Homologs of orf6 gene of AY144118

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PAU_02804
( YP_003041636.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

3e-87

2) plu1692
( NP_928974.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

5e-86

3) plu1652
( NP_928937.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

7e-85

4) plu1715
( NP_928996.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

1e-78

5) plu2399
( NP_929644.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

6e-74

6) afp16
( YP_003040844.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

9e-74

7) PAU_02099
( YP_003040935.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-69

8) plu2516
( NP_929752.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

7e-69

9) PAU_03338
( YP_003042168.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

7e-63

10) PAU_02231
( YP_003041067.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-42

• Sequence Alignments

1) PAU_02804 in NC_012962


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  314 bits (1177),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 198/222 (90%), Positives = 213/222 (96%), Gaps = 0/222 (0%)

Query  1    MTTLIASDNAIIEINQALNTILSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDIHE  60
            MTTLIASDNAIIE+N+ALNT+LSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDI+E
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  61   DLQLRSAEPRRYNPANNSLLPGWVNINCNYLITYWDVNKpssdgsspdsQPNNQAAQVMT  120
            DLQLRSAEPRRYNP  ++LLPGWVNINCNYLITYWD NKPSSD+SSPDSQPNNQAAQVMT
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  121  RVLNALINNRQLTGIPGAYTRVIPQQENLNSLGNFWQALGNRPRLSLLYSITVPMKLQDI  180
            RVLNALINNRQLTGIPGAYTR+IPQQENLNSLGNFWQALGNRPRLSL+YSITVPMKLQDI
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  181  QEGITPIKQISASVDHKQNLNNSQINQALADKLCTDLGGTED  222
            ++ ITPI QISASV +K +LNNSQINQAL+DKLC+DLGG E 
Sbjct  181  KDNITPISQISASVVQKPSLNNSQINQALTDKLCADLGGIEA  222

2) plu1692 in NC_005126


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  310 bits (1162),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 208/232 (90%), Positives = 221/232 (96%), Gaps = 0/232 (0%)

Query  1    MTILIASDNAIIEVNNALNTILSQHLNINGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60
            MT LIASDNAIIEVNNALNT+LSQ LN NGNKIDIRFDLPEINSIQSEPTVSVFLYDINE
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  61   DLQLRSAEPRRYNPMTSTLLPGWVNINCHYLITYWDANKPssdssspdsqpnnqAAQVMT  120
            DLQLRSAEPRRYNP+TSTLLPGWVNINC+YLITYWDANKPSSDSSSPDSQPNNQAAQVMT
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  121  RVLNALINNRQLTDIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQNI  180
            RVLNALINNRQLT+IPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQ+I
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  181  KDNITPINQISASVEQKPNLNNSQINQALVDKLCADLGGTEDARLALAKVNL  232
            KDNITPI+QISASV QKP+LNNSQINQAL DKLCADLGG E   ++  ++++
Sbjct  181  KDNITPISQISASVVQKPSLNNSQINQALTDKLCADLGGIEADTFTSKNIKV  232

3) plu1652 in NC_005126


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  306 bits (1147),  Expect = 7e-85, Method: Compositional matrix adjust.
 Identities = 199/222 (90%), Positives = 215/222 (97%), Gaps = 0/222 (0%)

Query  1    MTTIIASDNAIIEINQALNTILSQYLNINGNKIDIRFDLPEINSIQPEPTVSVFLYNIHE  60
            MTT+IASDNAIIE+N+ALNT+LSQYLN NGNKIDIRFDLPEINSIQ+EPTVSVFLY+I+E
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  61   DLQLRSAEPRRYNPATRSLLPGWVNINCNYLITYWDANKPssdssspdsqpnnqAAQVMT  120
            DLQLRSAEPRRYNP T +LLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  121  RVLNALINNRQLTGIPGAYTRVIPQQENLNSLGNFWQALGNRPRLSLLYSITAPMKLQDI  180
            RVLNALINNRQLTGIPGAYTR+IPQQENLNSLGNFWQALGNRPRLSL+YSIT PMKLQDI
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  181  KEDITPISQISASVDQKPNLDNSQINQALADKLCTDLGGTED  222
            K++ITPISQISASV QKP+L+NSQINQAL+DKLC+DLGG E 
Sbjct  181  KDNITPISQISASVVQKPSLNNSQINQALTDKLCADLGGIEA  222

4) plu1715 in NC_005126


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  286 bits (1069),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 177/219 (81%), Positives = 204/219 (94%), Gaps = 0/219 (0%)

Query  16   QALNTILSQYLNITGQNIDIRFDLPEINSIQSEPTVSVFLYEIHEDLQLRSAESRRYNPS  75
            +ALNT+LSQYLN  G++IDIRFDLPEINSIQSEPTVSVFLY+I+EDLQLRSAE+RRYNP 
Sbjct  16   NALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINEDLQLRSAEPRRYNPI  75

Query  76   TNTLLPGWVNINCNYLITYWDAskpssdssspdsQPNNQAAQVMTRILNALINNRQLTGL  135
            T+TLLPGWVNINCNYLITYWDA+KPSSDSSSPDSQPNNQAAQVMTR+LNALINNRQLTG+
Sbjct  76   TSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMTRVLNALINNRQLTGI  135

Query  136  PGAYTRIIPQQENLNSLGNFWQALGNRPRLSLLYSITVPMKLKNIEDNVIPVSKISASVD  195
            PGAYTRIIPQQENLNSLGNFWQALGNRPRLSL+YSITVPMKL++I DN+ P+S+ISASV 
Sbjct  136  PGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDIKDNITPISQISASVV  195

Query  196  QKPNLDNSQINQALIDKLCVELGGTEDVRLALAKVNLTT  234
            QKP+L+NSQINQAL DKLC +LGG E   ++  +++++ 
Sbjct  196  QKPSLNNSQINQALTDKLCADLGGIEADTFTSKNIKVSG  234

5) plu2399 in NC_005126


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  270 bits (1009),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 164/222 (74%), Positives = 198/222 (90%), Gaps = 0/222 (0%)

Query  1    MTNIIDPNNAIIAVNTALHEILSQHLNTSNQMIDIRFDLPEINSTPAKPTVSVFLYDIHE  60
            MT +I ++NAII VN AL+ +LSQ LNT+ + IDIRFDLPEINS  + PTVSVFLYDI+E
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  61   DLQLRSAEPKSYNPITSSLLSGWVNINYNYLITYWHSNQPSGDGSNPDSQPNNQAARVMT  120
            DLQLRSAEP+ YNPITS+LL+GWVNIN NYLITYW++N+PS+D+S+PDSQPNNQAA+VMT
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  121  AILNALVNNRQLPKIPGAYTRVIPPQENLNSLGNFWQALGNRPRLSLLYSITAPVKLQNI  180
             +LNAL+NNRQL  IPGAYTR+IP QENLNSLGNFWQALGNRPRLSL+YSIT P+KLQ+I
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  181  KDIIKPVSQISTSVDQKSNLDNSQIDQALFNKLCSNLGGTED  222
            KD I P+SQIS+SV QK++L+NSQI+QAL +KLC++LGG E 
Sbjct  181  KDNITPISQISASVVQKPSLNNSQINQALTDKLCADLGGIEA  222

6) afp16 in NC_012962


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  269 bits (1007),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 166/240 (70%), Positives = 208/240 (87%), Gaps = 1/240 (0%)

Query  1    MKNIIEPDNAIVEVNNALNEILSQYLNISGQKIDIRFDLPEMESIPSHPTVSVFLYDIHE  60
            M  +I +DNAI+EVNNALN +LSQYLN +G+KIDIRFDLPE++SI S+PTVSVFLYDI+E
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  61   DLQLRSAESRSYCPSSSTLLPGWVNINYNYLITYWHSNKPSSDSANPDSQPDNQAVKVMT  120
            DLQLRSAE+R Y P +STLLPGWVNIN NYLITYW++NKPSSDS++PDSQP+NQA +VMT
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  121  CVLNALINSRQLPTIPGAYTRVIPPQENLNSLGNFWQALSNRPRLSLLYSVTAPVKLLNI  180
             VLNALIN+RQL  IPGAYTR+IP QENLNSLGNFWQAL+NRPRLSL+YS+T P+KL +I
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  181  KDAIKPVNQIFSSVNQKSSLDNLQINQALAEKLYSDLGGTEDVRFALIKVNLKTEFHTKD  240
            KD I P++QI +SV QK+SL+N QINQAL++KL +DLGG E   F+  ++++ + ++ K+
Sbjct  181  KDNITPISQISASVVQKPSLNNSQINQALTDKLCADLGGIEADTFTSKNIKV-SGYNRKN  239

7) PAU_02099 in NC_012962


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  256 bits (955),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 170/234 (73%), Positives = 203/234 (87%), Gaps = 4/234 (1%)

Query  1    MTNIINPNNAILEVNNALNDILSQYLT----NIDIRFDLPEINSIPSTPTVSIFLYDIHE  56
            MT +I ++NAI+EVNNALN +LSQYL     +IDIRFDLPEINSI S PTVS+FLYDI+E
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  57   DLQLRSAEPRSYHPTTSSLLPGWVNINYNYLITYWHssnpssdsstpdsqpnnQAAQVMT  116
            DLQLRSAEPR Y+P TS+LLPGWVNIN NYLITYW++++PSSDSS+PDSQPNNQAAQVMT
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  117  AILNALVNNRQLPKIPGAYTRVIPPQENLNSLGNFWQALGNRPRLSLLYSITAPVKLQNI  176
             +LNAL+NNRQL  IPGAYTR+IP QENLNSLGNFWQALGNRPRLSL+YSIT P+KLQ+I
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  177  KDVIKPISQISTSVDQKSNLDNSQINQALFSKLGADLGGTQDVRLALAKVNLTT  230
            KD I PISQIS+SV QK++L+NSQINQAL  KL ADLGG +   ++  +++++ 
Sbjct  181  KDNITPISQISASVVQKPSLNNSQINQALTDKLCADLGGIEADTFTSKNIKVSG  234

8) plu2516 in NC_005126


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  253 bits (945),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 155/233 (67%), Positives = 195/233 (84%), Gaps = 4/233 (1%)

Query  1    MKDTIEPNNAIVEVNNALKDILSRYLN----NIDIRFDLPDIDSIPSKPTISVFLYDVHE  56
            M   I ++NAI+EVNNAL+ +LS+YLN    +IDIRFDLP+I+SI S PT+SVFLYD++E
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  57   DLQLRSAEPKRYNPVTNLLLPGWVNINYNYLITYWHSNKPSVDGSSPDSQPDNQAAKIMT  116
            DLQLRSAEP+RYNP+T+ LLPGWVNIN NYLITYW++NKPS D+SSPDSQP+NQAA++MT
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  117  SILNALINHRQLPKIPGAYTKVIPPQENLNSLGNFWQALGNRPRLSLLYSITAPVKLQDI  176
             +LNALIN+RQL  IPGAYT++IP QENLNSLGNFWQALGNRPRLSL+YSIT P+KLQDI
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  177  TNIVEPVMDISHSVDQKLYLTSSQICQELLEKLCVDLGGTEDIRLALTKVNLT  229
             + + P+ +IS SV QK  L +SQI Q L +KLC DLGG E   ++  +++++
Sbjct  181  KDNITPISQISASVVQKPSLNNSQINQALTDKLCADLGGIEADTFTSKNIKVS  233

9) PAU_03338 in NC_012962


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  233 bits (869),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 130/228 (58%), Positives = 194/228 (86%), Gaps = 3/228 (1%)

Query  3    NTQTIIDVNKAMDAMLRAYLNQD---IAIRFDLPELDTMQSDAMVSIFLYDIHEDLQLRS  59
            + ++II+VN+A++++L  YLN +   I IRFDLPE++++QS++ VS+FLYDI+EDLQLRS
Sbjct  7    SDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINEDLQLRS  66

Query  60   AESRGFDVYAGRLLPGWVNIKCNYLITYWEASKPATDASSPDSQPDNQAIQVMSQVLNAL  119
            AE+R ++  ++ LLPGWVNI+CNYLITYW+A+KP++D+SSPDSQP+NQA QVM++VLNAL
Sbjct  67   AEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMTRVLNAL  126

Query  120  INNRQLAGIPGAYTQVVPPKESLNSLGNFWQSLGNRPRLSLNYSVTVPVSLNDGQDSATP  179
            INNRQL+GIPGAYT+++P +E+LNSLGNFWQ+LGNRPRLSL YS+TVP+ L+D +D+ TP
Sbjct  127  INNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDIKDNITP  186

Query  180  VTAVSSTVEQTASLSQEVVSHALRELLITELGGGEDNRLVLSKVELSA  227
            ++ +S++V Q +SL++  +++AL + L ++LGG E + +   ++ +S+
Sbjct  187  ISQISASVVQKPSLNNSQINQALTDKLCADLGGIEADTFTSKNIKVSG  234

10) PAU_02231 in NC_012962


> AY144118|6|G6|27497181|AAN64210.1|Photorhabdus_luminescens_W14|+|5721..6452|orf6|-|Orf6
Length=243

 Score =  166 bits (613),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 95/218 (44%), Positives = 154/218 (71%), Gaps = 8/218 (3%)

Query  1    MVKNIKSDETLLILNSKIEDALKAYLP--GEDVVIRFDMFGKNENPDSPTVCVFLYDIQE  58
            M   I SD++++ +N+ ++  L  YL   G+ + IRFD+   N     PTV VFLYDI+E
Sbjct  1    MTTLIASDNAIIEVNNALNTVLSQYLNTNGNKIDIRFDLPEINSIQSEPTVSVFLYDINE  60

Query  59   DLQLRVGEGRQYLPATGNFVPGCVNVRCNYLISYWEPEQSGGQGSPTI-RSNSQSMKIMN  117
            DLQLR +E R+Y P T+ ++PG VN+ CNYLI+YW+++++++++S+   ++N+Q+ ++M 
Sbjct  61   DLQLRSAEPRRYNPITSTLLPGWVNINCNYLITYWDANKPSSDSSSPDSQPNNQAAQVMT  120

Query  118  CVLNALINHRSFPGLPRTYTRVLPPNEQLNSLGNFWQSLDNKPRLCLSYMVTIPIQLTPP  177
             VLNALIN+R + G+P +YTR++P +E+LNSLGNFWQ+L+N+PRL L Y +T+P++L   
Sbjct  121  RVLNALINNRQLTGIPGAYTRIIPQQENLNSLGNFWQALGNRPRLSLMYSITVPMKLQDI  180

Query  178  TEKVSPVITSKTDITRKPSLNFYLEADEIIRQALVDAL  215
             ++++P+    + + +KPSLN     +  I QAL D L
Sbjct  181  KDNITPISQISASVVQKPSLN-----NSQINQALTDKL  213