Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of hopPtoA2 gene of AF469470

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hopAA1-2
( NP_794461.1 )

type III effector HopAA1-2

NC_004578
(Pseudomonas syringae DC3000)

0.0

100

2) hopAA1-1
( NP_791199.1 )

type III effector HopAA1-1

NC_004578
(Pseudomonas syringae DC3000)

1e-152

3) Psyr_1183
( YP_234275.1 )

type III effector HopAA1

NC_007005
(Pseudomonas syringae B728a)

7e-131

• Sequence Alignments

1) hopAA1-2 in NC_004578


> AF469470|6|G6|28194204|AAO33453.1|Pseudomonas_syringae_pv._tomato_DC3000|+|9156..10619|hopPtoA2|-|Hrp-dependent 
outer protein 
A2
Length=487

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/487 (100%), Positives = 487/487 (100%), Gaps = 0/487 (0%)

Query  1    MHINQSAQQPPGVAMESFrtasdaslasssvrsvsttscrdLQAITDYLKHHVFAAHRFS  60
            MHINQSAQQPPGVAMESFRTASDASLASSSVRSVSTTSCRDLQAITDYLKHHVFAAHRFS
Sbjct  1    MHINQSAQQPPGVAMESFRTASDASLASSSVRSVSTTSCRDLQAITDYLKHHVFAAHRFS  60

Query  61   VIGSPDERDAALAHNEQIDALVETRANRLYSEGETPATIAETFAKAEKFDRLATTASSAF  120
            VIGSPDERDAALAHNEQIDALVETRANRLYSEGETPATIAETFAKAEKFDRLATTASSAF
Sbjct  61   VIGSPDERDAALAHNEQIDALVETRANRLYSEGETPATIAETFAKAEKFDRLATTASSAF  120

Query  121  ENTPFAAASVLQYMQPAINKGDWLATPLKPLTPLISGALSGAMDQVGTKMMDRARGDLHY  180
            ENTPFAAASVLQYMQPAINKGDWLATPLKPLTPLISGALSGAMDQVGTKMMDRARGDLHY
Sbjct  121  ENTPFAAASVLQYMQPAINKGDWLATPLKPLTPLISGALSGAMDQVGTKMMDRARGDLHY  180

Query  181  LSTSPDKLHDAMAVSVKRHSPALGRQVVDMGIAVQTFSALNVVRTVLAPALASRPSVQGA  240
            LSTSPDKLHDAMAVSVKRHSPALGRQVVDMGIAVQTFSALNVVRTVLAPALASRPSVQGA
Sbjct  181  LSTSPDKLHDAMAVSVKRHSPALGRQVVDMGIAVQTFSALNVVRTVLAPALASRPSVQGA  240

Query  241  VDFGVSTAGGLVANAGFGDRMLSVQSRDQLRGGAFVLGMKDKEPKAALSEETDWLDAYKA  300
            VDFGVSTAGGLVANAGFGDRMLSVQSRDQLRGGAFVLGMKDKEPKAALSEETDWLDAYKA
Sbjct  241  VDFGVSTAGGLVANAGFGDRMLSVQSRDQLRGGAFVLGMKDKEPKAALSEETDWLDAYKA  300

Query  301  IKSASYSGAALNAGKRMAGLPLDVATDGLKAVRSLVSATSLTKNGLALAGGYAGVSKLQK  360
            IKSASYSGAALNAGKRMAGLPLDVATDGLKAVRSLVSATSLTKNGLALAGGYAGVSKLQK
Sbjct  301  IKSASYSGAALNAGKRMAGLPLDVATDGLKAVRSLVSATSLTKNGLALAGGYAGVSKLQK  360

Query  361  MATKNITDSATKAAVSQLSNLVGSVGVFAGWTTAGLATDPAVKKAESFIQDKVKSTASST  420
            MATKNITDSATKAAVSQLSNLVGSVGVFAGWTTAGLATDPAVKKAESFIQDKVKSTASST
Sbjct  361  MATKNITDSATKAAVSQLSNLVGSVGVFAGWTTAGLATDPAVKKAESFIQDKVKSTASST  420

Query  421  TSYVADQTVKLAKTVKDMSGEAISSTGASLRSTVNNLRHRSAPEADIEEGGISAFSRSET  480
            TSYVADQTVKLAKTVKDMSGEAISSTGASLRSTVNNLRHRSAPEADIEEGGISAFSRSET
Sbjct  421  TSYVADQTVKLAKTVKDMSGEAISSTGASLRSTVNNLRHRSAPEADIEEGGISAFSRSET  480

Query  481  PFQLRRL  487
            PFQLRRL
Sbjct  481  PFQLRRL  487

2) hopAA1-1 in NC_004578


> AF469470|6|G6|28194204|AAO33453.1|Pseudomonas_syringae_pv._tomato_DC3000|+|9156..10619|hopPtoA2|-|Hrp-dependent 
outer protein 
A2
Length=487

 Score =  532 bits (2008),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 381/486 (79%), Positives = 440/486 (91%), Gaps = 1/486 (0%)

Query  1    MHINRRVQQPPVTATDSFRTAsdaslasssvrsvssdqqrEINAIADYLTDHVFAAHKLP  60
            MHIN+  QQPP  A +SFRTASDASLASSSVRSVS+   R+++AI+DYL +HVFAAH+++
Sbjct  1    MHINQSAQQPPGVAMESFRTASDASLASSSVRSVSTTSCRDLQAITDYLKHHVFAAHRFS  60

Query  61   PADSADGQAAVDVHNAQITALIETRASRLHFEGETPATIADTFAKAEKLDRLATTTSGAL  120
              +S+D + A   HN QI AL+ETRA+RL  EGETPATIA+TFAKAEK+DRLATT+S+A+
Sbjct  61   VIGSPDERDAALAHNEQIDALVETRANRLYSEGETPATIAETFAKAEKFDRLATTASSAF  120

Query  121  RATPFAMASLLQYMQPAINKGDWLPAPLKPLTPLISGALSGAMDQVGTKMMDRATGDLHY  180
              TPFA AS+LQYMQPAINKGDWL++PLKPLTPLISGALSGAMDQVGTKMMDRA GDLHY
Sbjct  121  ENTPFAAASVLQYMQPAINKGDWLATPLKPLTPLISGALSGAMDQVGTKMMDRARGDLHY  180

Query  181  LSASPDRLHDAMAASVKRHSPSLARQVLDTGVAVQTYSARNAVRTVLAPALASRPAVQGA  240
            LS+SPD+LHDAMA SVKRHSP+L+RQV+D G+AVQT+SA N VRTVLAPALASRP+VQGA
Sbjct  181  LSTSPDKLHDAMAVSVKRHSPALGRQVVDMGIAVQTFSALNVVRTVLAPALASRPSVQGA  240

Query  241  VDLGVSMagglaanagfgnrllSVQSRDHQRGGALVLGLKDKEPKAQLSEENDWLEAYKA  300
            VD+GVS AGGL ANAGFG+R+LSVQSRD+ RGGA+VLG+KDKEPKA LSEE DWL+AYKA
Sbjct  241  VDFGVSTAGGLVANAGFGDRMLSVQSRDQLRGGAFVLGMKDKEPKAALSEETDWLDAYKA  300

Query  301  IKSASYSGAALNAGKRMAGLPLDMATDAMGAVRSLVSASSLTQNglalaggfagvgklQE  360
            IKSASYSGAALNAGKRMAGLPLD+ATD++ AVRSLVSA+SLT+NGLALAGG+AGV+KLQ 
Sbjct  301  IKSASYSGAALNAGKRMAGLPLDVATDGLKAVRSLVSATSLTKNGLALAGGYAGVSKLQK  360

Query  361  MATKNITDPATKAAVSQLTNLAGSAAVFAGWTTAALTTDPAVKKAESFIQDTVKSTASST  420
            MATKNITD+ATKAAVSQL+NL GS +VFAGWTTA+L+TDPAVKKAESFIQD VKSTASST
Sbjct  361  MATKNITDSATKAAVSQLSNLVGSVGVFAGWTTAGLATDPAVKKAESFIQDKVKSTASST  420

Query  421  TGYVADQTVKLAKTVKDMGGEAITHTGASLRNTVNNLRQRPAREADIEEGGTAA-SPSEI  479
            T+YVADQTVKLAKTVKDM+GEAI+ TGASLR+TVNNLR+R+A EADIEEGG +A S SE 
Sbjct  421  TSYVADQTVKLAKTVKDMSGEAISSTGASLRSTVNNLRHRSAPEADIEEGGISAFSRSET  480

Query  480  PFRPMR  485
            PF+  R
Sbjct  481  PFQLRR  486

3) Psyr_1183 in NC_007005


> AF469470|6|G6|28194204|AAO33453.1|Pseudomonas_syringae_pv._tomato_DC3000|+|9156..10619|hopPtoA2|-|Hrp-dependent 
outer protein 
A2
Length=487

 Score =  460 bits (1733),  Expect = 7e-131, Method: Compositional matrix adjust.
 Identities = 347/483 (72%), Positives = 425/483 (88%), Gaps = 4/483 (0%)

Query  1    MHINRTGSSQPSIELERFYsasqslasssVRELSPAEHA-NLQAITDYLKDHVFAAHKLP  59
            MHIN+++   P++ +E F +AS++  +SS     ++    +LQAITDYLK+HVFAAH+++
Sbjct  1    MHINQSAQQPPGVAMESFRTASDASLASSSVRSVSTTSCRDLQAITDYLKHHVFAAHRFS  60

Query  60   LSESAVDQDAVHAHNEQLDKIIDARARRLLDEGETPATIADTFAKAEKFDRMATTASITL  119
            +  S+ ++DA  AHNEQ+D ++++RA RL  EGETPATIA+TFAKAEKFDR+ATTAS ++
Sbjct  61   VIGSPDERDAALAHNEQIDALVETRANRLYSEGETPATIAETFAKAEKFDRLATTASSAF  120

Query  120  RATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSGIMDQVGTTVMNRATGNLHY  179
              TPFAAASVLQYMQPAINKGDWL+ PLKPLTP++SGALSG MDQVGT +M+RA G+LHY
Sbjct  121  ENTPFAAASVLQYMQPAINKGDWLATPLKPLTPLISGALSGAMDQVGTKMMDRARGDLHY  180

Query  180  LSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGA  239
            LST+P+KLHDAMA SVKRHSP++ RQ VD+GIA+Q++SA N VRTVLAPALASRP+VQGA
Sbjct  181  LSTSPDKLHDAMAVSVKRHSPALGRQVVDMGIAVQTFSALNVVRTVLAPALASRPSVQGA  240

Query  240  VDISVSaagglaanagfgnRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKA  299
            VD++VS+AGGL ANAGFG+RM SVQ+RD+LRGGAFVLG+KD+EPKA LSEETDWL AYKA
Sbjct  241  VDFGVSTAGGLVANAGFGDRMLSVQSRDQLRGGAFVLGMKDKEPKAALSEETDWLDAYKA  300

Query  300  IKSASYSGAALNAGKRVAGLPLDVATDGLKAVRSLVSatglaqnglalaggfagvgklQE  359
            IKSASYSGAALNAGKR+AGLPLDVATDGLKAVRSLVSAT+L++NGLALAGG+AGV+KLQ 
Sbjct  301  IKSASYSGAALNAGKRMAGLPLDVATDGLKAVRSLVSATSLTKNGLALAGGYAGVSKLQK  360

Query  360  MATKNITDPATKAAVSQLTNMAASTGvfaawttaavatdpavkkaESFLQDTVKSAASSS  419
            MATKNITD+ATKAAVSQL+N+ +S GVFA+WTTA++ATDPAVKKAESF+QD VKS+ASS+
Sbjct  361  MATKNITDSATKAAVSQLSNLVGSVGVFAGWTTAGLATDPAVKKAESFIQDKVKSTASST  420

Query  420  TSYVADQTVKLAKAGIDASGEAIAATGASL---LDTLRRRNAREPDIEEGGIAAGSPSAV  476
            TSYVADQTVKLAK+  D SGEAI++TGASL   ++ LR+R+A E+DIEEGGI+A S S  
Sbjct  421  TSYVADQTVKLAKTVKDMSGEAISSTGASLRSTVNNLRHRSAPEADIEEGGISAFSRSET  480

Query  477  PFQ  479
            PFQ
Sbjct  481  PFQ  483