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Homologs of EFAU085_00740 gene of NC_021994_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EFAU004_02772
( YP_005355970.1 )

Helix-turn-helix domain protein

NC_017022
(Enterococcus faecium Aus0004)

2e-31

100

2) EFAU085_00740
( YP_008394264.1 )

Helix-turn-helix domain protein

NC_021994
(Enterococcus faecium AUS0085)

2e-31

100

3) CK3_31060
( YP_007825031.1 )

hypothetical protein

NC_021035
(butyrate-producing bacterium SS3/4)

3e-20

4) FPR_01280
( YP_007798981.1 )

hypothetical protein

NC_021020
(Faecalibacterium prausnitzii SL3/3)

4e-17

5) CK5_36080
( YP_007806751.1 )

hypothetical protein

NC_021022
([Ruminococcus] obeum A2-162)

8e-13

6) CK5_05210
( YP_007804081.1 )

hypothetical protein

NC_021022
([Ruminococcus] obeum A2-162)

9e-12

7) CK5_09010
( YP_007804395.1 )

hypothetical protein

NC_021022
([Ruminococcus] obeum A2-162)

9e-12

8) LMHCC_1339
( YP_002350298.1 )

conjugative transposon protein

NC_011660
(Listeria monocytogenes HCC23)

1e-11

9) lmo4a_1289
( YP_005926282.1 )

hypothetical protein

NC_017529
(Listeria monocytogenes L99)

1e-11

10) LMM7_1317
( YP_005947380.1 )

conjugative transposon protein

NC_017537
(Listeria monocytogenes M7)

1e-11

11) FP2_14310
( YP_007837210.1 )

hypothetical protein

NC_021042
(Faecalibacterium prausnitzii L2/6)

5e-11

12) CLS_30000
( YP_007850286.1 )

hypothetical protein

NC_021047
(Clostridium saccharolyticum K10)

2e-10

13) ES1_15140
( YP_007840001.1 )

hypothetical protein

NC_021043
(Eubacterium siraeum V10Sc8a)

2e-10

14) RBR_01110
( YP_007780344.1 )

hypothetical protein

NC_021013
(Ruminococcus bromii L2-63)

2e-10

15) RBR_21300
( YP_007782026.1 )

hypothetical protein

NC_021013
(Ruminococcus bromii L2-63)

1e-09

16) RTO_20850
( YP_007787115.1 )

hypothetical protein

NC_021015
([Ruminococcus] torques L2-14)

9e-10

17) Tresu_1934
( YP_004366113.1 )

conjugative transposon protein

NC_015385
(Treponema succinifaciens DSM 2489)

2e-09

18) CK3_34820
( YP_007825345.1 )

hypothetical protein

NC_021035
(butyrate-producing bacterium SS3/4)

2e-09

19) EC1_05710
( YP_007797812.1 )

hypothetical protein

NC_021019
(Eubacterium cylindroides T2-87)

3e-09

20) CD630_10921
( YP_001087576.1 )

conjugative transposon protein

NC_009089
(Clostridium difficile 630)

4e-09

21) CLS_07910
( YP_007848540.1 )

hypothetical protein

NC_021047
(Clostridium saccharolyticum K10)

1e-08

22) EFAU085_01569
( YP_008395091.1 )

Helix-turn-helix domain protein

NC_021994
(Enterococcus faecium AUS0085)

5e-07

23) EF1849
( NP_815541.1 )

hypothetical protein

NC_004668
(Enterococcus faecalis V583)

8e-07

24) EF0481
( NP_814264.1 )

hypothetical protein

NC_004668
(Enterococcus faecalis V583)

9e-07

25) CK5_22410
( YP_007805569.1 )

hypothetical protein

NC_021022
([Ruminococcus] obeum A2-162)

2e-05

26) SCI_0476
( YP_008498432.1 )

hypothetical protein

NC_022238
(Streptococcus constellatus C1050)

3e-05

27) SCRE_0456
( YP_008494877.1 )

hypothetical protein

NC_022236
(Streptococcus constellatus C232)

3e-05

28) SCR2_0456
( YP_008510640.1 )

hypothetical protein

NC_022245
(Streptococcus constellatus C818)

3e-05

• Sequence Alignments

1) EFAU004_02772 in NC_017022


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60
           MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  AMKRRLEIKLIHAIVTN  77
           AMKRRLEIKLIHAIVTN
Sbjct  61  AMKRRLEIKLIHAIVTN  77

2) EFAU085_00740 in NC_021994


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60
           MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  AMKRRLEIKLIHAIVTN  77
           AMKRRLEIKLIHAIVTN
Sbjct  61  AMKRRLEIKLIHAIVTN  77

3) CK3_31060 in NC_021035


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 91.5 bits (328),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 51/76 (68%), Positives = 64/76 (85%), Gaps = 0/76 (0%)

Query  1   MKQSSYKGKSPLPDFVIDAACAGNAEAVERVLQHYDGYINKLCTRTLYDGSGQPHICIDE  60
           MK+++YKG   LP  VI+AA AG+A AVERVLQ Y GY+NKLCTRTLYD +G PH+C+DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  YMKRRFQIKLIHSIVS  76
            MKRR++IKLIH+IV+
Sbjct  61  AMKRRLEIKLIHAIVT  76

4) FPR_01280 in NC_021020


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 81.3 bits (289),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 48/67 (72%), Positives = 57/67 (86%), Gaps = 0/67 (0%)

Query  10  ELLPLSVIRSACAGDTDAVEQVLQHYRGYINKLCTGILYDKHGQPHVCIDEYMKRHLEIK  69
           ELLPLSVI +A AGD++AVE+VLQ Y GY+NKLCT  LYD +G PHVC+DE MKR+LEIK
Sbjct  10  ELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIK  69

Query  70  LISSIVT  76
           LI +IVT
Sbjct  70  LIHAIVT  76

5) CK5_36080 in NC_021022


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 67.1 bits (235),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 33/67 (50%), Positives = 47/67 (71%), Gaps = 0/67 (0%)

Query  12  KLIPLWVIERALEGDIQAINKILKHYEGYIAKLSVRKMYDEYGCVHYCVDETLRRRLETK  71
            L+PL VIE A  GD  A++++L+ Y GY+ KL  R +YDE G  H C+DE+++RRLE K
Sbjct  10  ELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIK  69

Query  72  LIKTIIG  78
           LI +I+ 
Sbjct  70  LIHAIVT  76

6) CK5_05210 in NC_021022


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 63.7 bits (222),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 47/66 (72%), Gaps = 0/66 (0%)

Query  13  LISLCVIERALEGDIQAINKVLKHYEGYIAKLSIRKMYDEYGSVHYCVDETLRRRLETKL  72
           L++L VIE A  GD  A+++VL+ Y GY+ KL  R +YDE G  H C+DE+++RRLE KL
Sbjct  11  LLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKL  70

Query  73  IKTILG  78
           I +I+ 
Sbjct  71  IHAIVT  76

7) CK5_09010 in NC_021022


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 63.7 bits (222),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 49/64 (77%), Gaps = 0/64 (0%)

Query  10  AFDLLPFHVIEAASTGDTEAIQAVLKHYEGYITVLATRKMFDEFGQVHYCVDETLRQRLE  69
           +++LLP+ VIEAA +GD+ A++ VL+ Y GY+  L TR ++DE G  H C+DE++++RLE
Sbjct  8   GIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLE  67

Query  70  AKLI  73
            KLI
Sbjct  68  IKLI  71

8) LMHCC_1339 in NC_011660


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 62.9 bits (219),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 31/71 (44%), Positives = 45/71 (64%), Gaps = 0/71 (0%)

Query  1   MNETTQRKNRLVPYETIVAASEGDIEAIGAVLDHYTGYITTLSTRVLFDEYGNPHACVDE  60
           M++   +   L+P   I AA  GD  A+  VL+ Y+GY+  L TR L+DE G PH C+DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  DLRRRIEAKLV  71
            ++RR+E KL+
Sbjct  61  AMKRRLEIKLI  71

9) LMM7_1317 in NC_017537


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 62.9 bits (219),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 31/71 (44%), Positives = 45/71 (64%), Gaps = 0/71 (0%)

Query  1   MNETTQRKNRLVPYETIVAASEGDIEAIGAVLDHYTGYITTLSTRVLFDEYGNPHACVDE  60
           M++   +   L+P   I AA  GD  A+  VL+ Y+GY+  L TR L+DE G PH C+DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  DLRRRIEAKLV  71
            ++RR+E KL+
Sbjct  61  AMKRRLEIKLI  71

10) lmo4a_1289 in NC_017529


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 62.9 bits (219),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 31/71 (44%), Positives = 45/71 (64%), Gaps = 0/71 (0%)

Query  1   MNETTQRKNRLVPYETIVAASEGDIEAIGAVLDHYTGYITTLSTRVLFDEYGNPHACVDE  60
           M++   +   L+P   I AA  GD  A+  VL+ Y+GY+  L TR L+DE G PH C+DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  DLRRRIEAKLV  71
            ++RR+E KL+
Sbjct  61  AMKRRLEIKLI  71

11) FP2_14310 in NC_021042


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 61.0 bits (212),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 34/75 (46%), Positives = 52/75 (70%), Gaps = 0/75 (0%)

Query  1   MTKSACTRASLIPYPVIAAAVGGDPEAVNRVVRHYSGYIAALSTRTSYGPDGYPRPQVDE  60
           M ++      L+P +VI AA +GD+ AV+RV++ YSGY+  L TRT Y+ +GYP+  +DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  DLRGRLEAKLIISIL  75
            ++ RLE KLI +I+
Sbjct  61  AMKRRLEIKLIHAIV  75

12) CLS_30000 in NC_021047


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 33/71 (47%), Positives = 48/71 (68%), Gaps = 0/71 (0%)

Query  1   MMNTVRKSENLLPFPVISAAANGDTTAMCAILKHYEGYIAKLCTRTLKDDAGNTYSYVDE  60
           M N   K+ +LLP++VI AA  GD+ A+  +L+ Y GY+ KLCTRTL D+ G     +DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  EMRNRLQVRLI  71
            M+ RL+++LI
Sbjct  61  AMKRRLEIKLI  71

13) ES1_15140 in NC_021043


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 33/71 (47%), Positives = 48/71 (68%), Gaps = 0/71 (0%)

Query  1   MMNTVRKSENLLPFPVISAAANGDTTAMCAILKHYEGYIAKLCTRTLKDDAGNTYSYVDE  60
           M N   K+ +LLP++VI AA  GD+ A+  +L+ Y GY+ KLCTRTL D+ G     +DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  EMRNRLQVRLI  71
            M+ RL+++LI
Sbjct  61  AMKRRLEIKLI  71

14) RBR_01110 in NC_021013


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 33/71 (47%), Positives = 48/71 (68%), Gaps = 0/71 (0%)

Query  1   MMNTVRKSENLLPFPVISAAANGDTTAMCAILKHYEGYIAKLCTRTLKDDAGNTYSYVDE  60
           M N   K+ +LLP++VI AA  GD+ A+  +L+ Y GY+ KLCTRTL D+ G     +DE
Sbjct  1   MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE  60

Query  61  EMRNRLQVRLI  71
            M+ RL+++LI
Sbjct  61  AMKRRLEIKLI  71

15) RBR_21300 in NC_021013


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 56.8 bits (196),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 31/75 (42%), Positives = 49/75 (66%), Gaps = 0/75 (0%)

Query  7   NEPGYPENALVPYPVIVAATKGDPDAMKIVLQHFSGYIARLSMRKLYDERGNVYFGVDHD  66
           ++P Y    L+P +VI AA  GD++A+  VLQ +SGY+ +L  R LYDE G     +D+ 
Sbjct  2   KNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEA  61

Query  67  IRERLQAKLMMAVLT  81
           ++ RL+ KL+ A++T
Sbjct  62  MKRRLEIKLIHAIVT  76

16) RTO_20850 in NC_021015


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 56.8 bits (196),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 0/75 (0%)

Query  7   KPTEYPENALVPYPVILAASKGDPDAMKIVLQHFSGYIASLSMRKLYDERGNVYFGVDEE  66
           K  +Y    L+P +VI AA  GD++A+  VLQ +SGY+  L  R LYDE G     +DE 
Sbjct  2   KNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEA  61

Query  67  IRERLQAKLMRAILT  81
           ++ RL+ KL++AI+T
Sbjct  62  MKRRLEIKLIHAIVT  76

17) Tresu_1934 in NC_015385


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 56.1 bits (193),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 31/75 (42%), Positives = 49/75 (66%), Gaps = 0/75 (0%)

Query  7   NEPGYPEKALVPYPVILAATKGDPDAMKIVLQHFSGYIARLSMRKLYDERGNVYFGVDHD  66
           ++P Y    L+P +VI AA  GD++A+  VLQ +SGY+ +L  R LYDE G     +D+ 
Sbjct  2   KNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEA  61

Query  67  IRERLQAKLMMAVLT  81
           ++ RL+ KL+ A++T
Sbjct  62  MKRRLEIKLIHAIVT  76

18) CK3_34820 in NC_021035


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 55.5 bits (191),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 46/67 (69%), Gaps = 4/67 (5%)

Query  7   LPFEVIVSATEGDPEAITTVMNFYDGYISKLCLRKLYDEHG--NVCMVVDADLKNRVQTA  64
           LP+ VI +A  GD+ A+  V+++Y GY++KLC R LYDE+G  +VC+  D  +K R++  
Sbjct  12  LPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCL--DEAMKRRLEIK  69

Query  65  FLDMILN  71
           +++ I+ 
Sbjct  70  LIHAIVT  76

19) EC1_05710 in NC_021019


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 46/75 (62%), Gaps = 0/75 (0%)

Query  4   NKAVHKGNGLLPYPVIVSASQGDILAMNVVLSHYEPYIARLSMRTSIDEYGNPHTTVDED  63
           +++  KG  LLP +VI +A  GD  A++ VL  Y  Y+ +L  RT  DE G PH  +DE 
Sbjct  2   KNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEA  61

Query  64  MRSRLEAKLIEQVLN  78
           M+ RLE KLI+ ++ 
Sbjct  62  MKRRLEIKLIHAIVT  76

20) CD630_10921 in NC_009089


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 55.0 bits (189),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 31/75 (42%), Positives = 49/75 (66%), Gaps = 0/75 (0%)

Query  7   NQNDYPENALVPYPVILAASKGDPDAMKMVLQHFSGYIASLSMRKLYDERGNVYYGVDED  66
           ++ +Y    L+P +VI AA  GD++A+  VLQ +SGY+  L  R LYDE G     +DE 
Sbjct  2   KNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEA  61

Query  67  IRERLQARLMRAILT  81
           ++ RL+ +L++AI+T
Sbjct  62  MKRRLEIKLIHAIVT  76

21) CLS_07910 in NC_021047


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 53.2 bits (182),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 31/66 (47%), Positives = 44/66 (67%), Gaps = 0/66 (0%)

Query  8   IPVPVILAAVNGDEDALAAVVAHYQSYIRALATRPLKDDYGNTYLCVDEDMRLRLEAKLI  67
           +P++VI AA  GD +A+  V+  Y +Y+  L TR L D+ G   +C+DE M+ RLE KLI
Sbjct  12  LPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKLI  71

Query  68  HSIVTG  73
           H+IVT 
Sbjct  72  HAIVTN  77

22) EFAU085_01569 in NC_021994


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 47.9 bits (162),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 28/65 (44%), Positives = 43/65 (67%), Gaps = 0/65 (0%)

Query  12  LVPLSIILSALEGDPISIKMILKHYHSYMAKLCLTNGFNEVGQFVTYVDEYMISQLEIKL  71
           L+PLS+I +A  GD+ ++  +L+ Y +YM KLC    ++E G     +DE M  +LEIKL
Sbjct  11  LLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKL  70

Query  72  IEAIL  76
           I+AI+
Sbjct  71  IHAIV  75

23) EF1849 in NC_004668


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 47.1 bits (159),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 44/66 (67%), Gaps = 0/66 (0%)

Query  12  LVPISIILSALKEDPISIKMILKHYHGYITKLCLKNGFNEVGQFITYVDEYMLRQLEIKL  71
           L+P+S+I +A   D+ ++  +L+ Y GY+ KLC +  ++E G     +DE M R+LEIKL
Sbjct  11  LLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKL  70

Query  72  IEAILK  77
           I+AI+ 
Sbjct  71  IHAIVT  76

24) EF0481 in NC_004668


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 46.9 bits (158),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 43/66 (66%), Gaps = 0/66 (0%)

Query  12  LVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDEYMLRQLEIKL  71
           L+PLSVI++A   D+ ++  +L+ Y +Y+ KLC    ++E       +DE M R+LEIKL
Sbjct  11  LLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKL  70

Query  72  IEAILK  77
           I+AI+ 
Sbjct  71  IHAIVT  76

25) CK5_22410 in NC_021022


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 42.7 bits (142),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 28/65 (44%), Positives = 43/65 (67%), Gaps = 0/65 (0%)

Query  14  LLPYPVILAATKGDPEAMKIVVQHYASYIAYLSTRKVRDEYGNVYYGIDEDMRDRLQAKL  73
           LLP +VI AA  GD+ A+  V+Q Y++Y+  L TR + DE G     +DE M+ RL+ KL
Sbjct  11  LLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIKL  70

Query  74  MRAVL  78
           ++A++
Sbjct  71  IHAIV  75

26) SCI_0476 in NC_022238


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 41/66 (63%), Gaps = 0/66 (0%)

Query  16  GLLPYPVIIAATKGEPQAMNIVCQHYAGYITHLSMRKLRDERGNTYYGIDEDIRDRLRSK  75
            LLP +VI AA  G++ A++ V Q Y+GY+  L  R L DE G     +DE ++ RL  K
Sbjct  10  ELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIK  69

Query  76  LMQAVL  81
           L++A++
Sbjct  70  LIHAIV  75

27) SCRE_0456 in NC_022236


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 41/66 (63%), Gaps = 0/66 (0%)

Query  16  GLLPYPVIIAATKGEPQAMNIVCQHYAGYITHLSMRKLRDERGNTYYGIDEDIRDRLRSK  75
            LLP +VI AA  G++ A++ V Q Y+GY+  L  R L DE G     +DE ++ RL  K
Sbjct  10  ELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIK  69

Query  76  LMQAVL  81
           L++A++
Sbjct  70  LIHAIV  75

28) SCR2_0456 in NC_022245


> NC_021994_R1|58|G58|529233452|YP_008394264.1|Enterococcus_faecium_Aus0085|+|54929..55162|-|EFAU085_00740|Helix-turn-helix 
domain protein
Length=77

 Score = 41.9 bits (139),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 27/66 (41%), Positives = 41/66 (63%), Gaps = 0/66 (0%)

Query  16  GLLPYPVIIAATKGEPQAMNIVCQHYAGYITHLSMRKLRDERGNTYYGIDEDIRDRLRSK  75
            LLP +VI AA  G++ A++ V Q Y+GY+  L  R L DE G     +DE ++ RL  K
Sbjct  10  ELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDEAMKRRLEIK  69

Query  76  LMQAVL  81
           L++A++
Sbjct  70  LIHAIV  75