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Homologs of kpsC gene of NC_008563_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) kpsC
( YP_854335.1 )

capsule polysaccharide export protein KpsC

NC_008563
(Escherichia coli APEC O1)

0.0

100

2) ECOK1_3363
( YP_006102478.1 )

capsular polysaccharide biosynthesis protein

NC_017628
(Escherichia coli IHE3034)

0.0

100

3) ECOPMV1_03246
( YP_008573021.1 )

Capsule polysaccharide biosynthesis protein

NC_022370
(Escherichia coli PMV-1)

0.0

100

4) kpsC
( YP_002392933.1 )

Capsule polysaccharide export protein

NC_011742
(Escherichia coli S88)

0.0

100

5) UM146_01650
( YP_006109269.1 )

Capsule polysaccharide export protein

NC_017632
(Escherichia coli UM146)

0.0

100

6) kpsC
( YP_542344.1 )

capsule polysaccharide export protein KpsC

NC_007946
(Escherichia coli UTI89)

0.0

100

7) ECSF_2775
( YP_003350765.1 )

capsule polysaccharide export protein KpsC

NC_013654
(Escherichia coli SE15)

0.0

8) kpsC
( YP_006145484.1 )

capsule polysaccharide export protein

NC_017646
(Escherichia coli CE10)

0.0

9) kpsC
( YP_002409347.1 )

capsule polysaccharide export protein

NC_011750
(Escherichia coli IAI39)

0.0

10) kpsC
( YP_006097527.1 )

capsule polysaccharide export protein

NC_017626
(Escherichia coli 042)

0.0

11) LF82_465
( YP_002557800.1 )

KpsC protein

NC_011993
(Escherichia coli LF82)

0.0

12) NRG857_14605
( YP_006121265.1 )

Capsule polysaccharide export protein

NC_017634
(Escherichia coli NRG 857C)

0.0

13) kpsC
( YP_002399452.1 )

Capsule polysaccharide export protein

NC_011745
(Escherichia coli ED1a)

0.0

14) kpsC
( YP_002414088.1 )

Capsule polysaccharide export protein

NC_011751
(Escherichia coli UMN026)

0.0

15) kpsC
( YP_006107343.1 )

polysialic acid capsule polysaccharide export protein KpsC

NC_017631
(Escherichia coli ABU 83972)

0.0

16) kpsC
( YP_006155450.1 )

KpsC protein

NC_017652
(Escherichia coli clone D i14)

0.0

17) kpsC
( YP_006150531.1 )

KpsC protein

NC_017651
(Escherichia coli clone D i2)

0.0

18) kspC
( YP_006140145.1 )

Capsular polysaccharide export system protein

NC_017644
(Escherichia coli NA114)

0.0

19) kpsC
( YP_003000532.1 )

kpsC

NC_012892
(Escherichia coli BL21(DE3))

0.0

20) ECD_02818
( YP_003055394.1 )

capsule polysaccharide export protein KpsC

NC_012971
(Escherichia coli BL21(DE3))

0.0

21) ECB_02818
( YP_003046005.1 )

Capsule polysaccharide export protein KpsC

NC_012967
(Escherichia coli REL606)

0.0

22) kpsC
( YP_001745206.1 )

polysialic acid capsule polysaccharide export protein KpsC

NC_010498
(Escherichia coli SMS-3-5)

0.0

23) kpsC
( NP_755565.1 )

KpsC protein

NC_004431
(Escherichia coli CFT073)

0.0

24) Q7S_06565
( YP_005401124.1 )

capsular polysaccharide biosynthesis protein

NC_017047
(Rahnella aquatilis HX2)

0.0

25) Rahaq_1360
( YP_004212110.1 )

capsular polysaccharide biosynthesis protein

NC_015061
(Rahnella sp. Y9602)

0.0

26) Entcl_3735
( YP_003943260.1 )

capsular polysaccharide biosynthesis protein

NC_014618
(Enterobacter cloacae SCF1)

0.0

27) kpsC
( YP_003539605.1 )

capsule polysaccharide export protein

NC_013971
(Erwinia amylovora ATCC 49946)

0.0

28) kpsC
( YP_003532003.1 )

capsule polysaccharide export protein kpsc

NC_013961
(Erwinia amylovora CFBP1430)

0.0

29) kpsC
( YP_005801781.1 )

capsule polysaccharide export protein kpsC

NC_017390
(Erwinia pyrifoliae DSM 12163)

0.0

30) kpsC
( YP_002648006.1 )

KpsC protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

0.0

31) kpsC
( YP_005816680.1 )

KpsC protein

NC_017445
(Erwinia sp. Ejp617)

0.0

32) kpsC
( YP_003208976.1 )

capsule polysaccharide export protein kpsC

NC_013282
(Cronobacter turicensis z3032)

2e-177

33) ESA_03352
( YP_001439409.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

9e-172

34) kpsC
( YP_006344413.1 )

capsule polysaccharide export protein KpsC

NC_017933
(Cronobacter sakazakii ES15)

1e-170

35) lipA2
( YP_001652723.1 )

capsule polysaccharide modification protein

NC_010278
(Actinobacillus pleuropneumoniae JL03)

1e-141

36) APP7_1756
( YP_001969550.1 )

capsule polysaccharide modification protein LipA

NC_010939
(Actinobacillus pleuropneumoniae AP76)

3e-141

37) kpsC
( YP_001054384.1 )

capsule polysaccharide modification protein LipA

NC_009053
(Actinobacillus pleuropneumoniae L20)

1e-140

38) F382_08125
( YP_008234462.1 )

capsule polysaccharide transporter

NC_021743
(Mannheimia haemolytica D153)

2e-137

39) phyA
( YP_007882364.1 )

capsule polysaccharide modification protein PhyA

NC_021082
(Mannheimia haemolytica M42548)

2e-137

40) D650_740
( YP_007664856.1 )

Capsule polysaccharide modification protein LipA

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

2e-137

41) N220_13920
( YP_008340169.1 )

capsule polysaccharide transporter

NC_021883
(Mannheimia haemolytica USMARC_2286)

2e-137

42) J450_06985
( YP_008220405.1 )

capsule polysaccharide transporter

NC_021738
(Mannheimia haemolytica D171)

5e-137

43) NMBB_0086
( YP_005881752.1 )

capsule polysaccharide modification protein

NC_017505
(Neisseria meningitidis alpha710)

2e-136

44) NMBNZ0533_0087
( YP_005902749.1 )

capsule polysaccharide modification protein LipA

NC_017518
(Neisseria meningitidis NZ-05/33)

2e-136

45) J451_07850
( YP_008222912.1 )

capsule polysaccharide transporter

NC_021739
(Mannheimia haemolytica D174)

3e-136

46) NMBH4476_0082
( YP_005898815.1 )

capsule polysaccharide modification protein LipA

NC_017516
(Neisseria meningitidis H44/76)

7e-134

47) lipA
( NP_273145.1 )

capsule polysaccharide modification protein

NC_003112
(Neisseria meningitidis MC58)

7e-134

48) lipA
( YP_001598266.1 )

capsule polysaccharide modification protein

NC_010120
(Neisseria meningitidis 053442)

7e-134

49) NMA0186
( YP_002341732.1 )

capsule polysaccharide modification protein

NC_003116
(Neisseria meningitidis Z2491)

9e-134

50) lipA
( YP_005892886.1 )

polysialic acid capsule modification protein LipA

NC_017512
(Neisseria meningitidis WUE 2594)

1e-133

51) lipA
( YP_005877677.1 )

polysialic acid capsule modification protein LipA

NC_017501
(Neisseria meningitidis 8013)

2e-133

52) NMBM01240355_0084
( YP_005900778.1 )

capsule polysaccharide modification protein LipA

NC_017517
(Neisseria meningitidis M01-240355)

2e-133

53) NMBG2136_0083
( YP_005893009.1 )

capsule polysaccharide modification protein LipA

NC_017513
(Neisseria meningitidis G2136)

4e-133

54) lipA
( YP_974205.1 )

capsule polysaccharide modification protein

NC_008767
(Neisseria meningitidis FAM18)

1e-132

55) NMBM04240196_0091
( YP_005896877.1 )

capsule polysaccharide modification protein LipA

NC_017515
(Neisseria meningitidis M04-240196)

9e-133

56) hcsA'
( YP_005179191.1 )

capsule biosynthesis protein HcsA

NC_016809
(Haemophilus influenzae 10810)

3e-132

57) hcsA'
( YP_005179206.1 )

capsule biosynthesis protein HcsA

NC_016809
(Haemophilus influenzae 10810)

3e-132

58) ASU2_09035
( YP_006818176.1 )

capsule polysaccharide modification protein

NC_018690
(Actinobacillus suis H91-0380)

1e-131

59) hcsA
( YP_008543805.1 )

HcsA

NC_022356
(Haemophilus influenzae KR494)

8e-131

60) NMBM01240149_0081
( YP_005894932.1 )

capsule polysaccharide modification protein lipA

NC_017514
(Neisseria meningitidis M01-240149)

9e-129

61) WQG_2620
( YP_007547337.1 )

Capsule polysaccharide modification protein LipA

NC_020515
(Bibersteinia trehalosi USDA-ARS-USMARC-192)

3e-128

62) NT08PM_0490
( YP_006239392.1 )

protein PhyA

NC_017764
(Pasteurella multocida 3480)

1e-125

63) phyA
( NP_245710.1 )

protein PhyA

NC_002663
(Pasteurella multocida Pm70)

9e-126

64) phyA
( YP_005176723.1 )

protein PhyA

NC_016808
(Pasteurella multocida 36950)

5e-125

65) phyA
( YP_005363262.1 )

PhyA,Capsule polysaccharide export protein

NC_017027
(Pasteurella multocida HN06)

4e-124

66) Cpha266_2331
( YP_912745.1 )

capsule polysaccharide biosynthesis

NC_008639
(Chlorobium phaeobacteroides DSM 266)

3e-112

67) wcbA
( YP_001630919.1 )

protein involved in capsular polysaccharide export

NC_010170
(Bordetella petrii DSM 12804)

9e-112

68) kpsC
( YP_587864.1 )

capsule polysaccharide modification protein

NC_007974
(Cupriavidus metallidurans CH34)

2e-110

69) Hoch_5948
( YP_003270316.1 )

capsule polysaccharide biosynthesis protein

NC_013440
(Haliangium ochraceum DSM 14365)

2e-106

70) Alvin_0211
( YP_003442210.1 )

capsule polysaccharide biosynthesis protein

NC_013851
(Allochromatium vinosum DSM 180)

3e-101

71) Dvul_2595
( YP_968037.1 )

capsule polysaccharide biosynthesis

NC_008751
(Desulfovibrio vulgaris DP4)

2e-100

72) Meso_2755
( YP_675297.1 )

capsule polysaccharide biosynthesis

NC_008254
(Chelativorans sp. BNC1)

5e-98

73) TKWG_23315
( YP_006381242.1 )

capsule polysaccharide biosynthesis protein

NC_017964
(Advenella kashmirensis WT001)

2e-97

74) GU3_14830
( YP_005093469.1 )

capsule export protein KpsC

NC_016745
(Oceanimonas sp. GK1)

7e-97

75) CtCNB1_2753
( YP_003278795.1 )

capsule polysaccharide export protein kpsS

NC_013446
(Comamonas testosteroni CNB-1)

4e-94

76) Tgr7_1314
( YP_002513386.1 )

capsular polysaccharide biosynthesis protein

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

9e-94

77) Bresu_2762
( YP_003819692.1 )

capsule polysaccharide biosynthesis protein

NC_014375
(Brevundimonas subvibrioides ATCC 15264)

6e-93

78) MARHY2548
( YP_005430435.1 )

capsule polysaccharide export protein kpsC

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

2e-91

79) kpsC
( YP_007703794.1 )

capsule polysaccharide export protein KpsC

NC_020911
(Octadecabacter antarcticus 307)

1e-90

80) kpsC
( YP_166993.1 )

capsular polysaccharide export protein KpsC

NC_003911
(Ruegeria pomeroyi DSS-3)

8e-89

81) Syncc9902_0463
( YP_376475.1 )

polysaccharide export protein

NC_007513
(Synechococcus sp. CC9902)

2e-87

82) Pput_3912
( YP_001269220.1 )

capsule polysaccharide biosynthesis protein

NC_009512
(Pseudomonas putida F1)

1e-86

83) G157_01775
( YP_008533079.1 )

capsular polysaccharide export protein KpsC

NC_022347
(Campylobacter coli CVM N29710)

2e-86

84) lipA
( YP_003897468.1 )

capsular polysaccharide export protein

NC_014532
(Halomonas elongata DSM 2581)

2e-85

85) Syncc9605_2216
( YP_382510.1 )

polysaccharide export protein

NC_007516
(Synechococcus sp. CC9605)

1e-84

86) lipA
( YP_003897480.1 )

capsule polysaccharide modification protein

NC_014532
(Halomonas elongata DSM 2581)

3e-84

87) kpsC
( YP_006562120.1 )

capsule polysaccharide export protein KpsC

NC_018286
(Phaeobacter gallaeciensis 2.10)

2e-82

88) kpsC
( YP_006572333.1 )

capsule polysaccharide export protein KpsC

NC_018290
(Phaeobacter gallaeciensis DSM 17395)

4e-82

89) kpsC
( YP_003964182.1 )

capsular polysaccharide export protein KpsC

NC_014625
(Ketogulonicigenium vulgare Y25)

6e-82

90) kpsC
( YP_005795064.1 )

capsular polysaccharide biosynthesis protein

NC_017384
(Ketogulonicigenium vulgare WSH-001)

9e-82

91) wcbA
( YP_005589755.1 )

capsular polysaccharide export protein

NC_017223
(Bordetella pertussis CS)

2e-81

92) wcbA
( NP_880359.1 )

capsular polysaccharide export protein

NC_002929
(Bordetella pertussis Tohama I)

2e-81

93) wcbA
( YP_006966807.1 )

capsular polysaccharide export protein

NC_019382
(Bordetella bronchiseptica 253)

1e-80

94) wcbA
( NP_889459.1 )

capsular polysaccharide export protein

NC_002927
(Bordetella bronchiseptica RB50)

1e-80

95) wcbA
( NP_885145.1 )

capsular polysaccharide export protein

NC_002928
(Bordetella parapertussis 12822)

2e-80

96) wcbA
( YP_006626407.1 )

capsular polysaccharide export protein

NC_018518
(Bordetella pertussis 18323)

3e-80

97) wcbA
( YP_006900458.1 )

capsular polysaccharide export protein

NC_018829
(Bordetella bronchiseptica MO149)

2e-77

98) PPUBIRD1_3815
( YP_005931607.1 )

capsular polysaccharide biosynthesis protein

NC_017530
(Pseudomonas putida BIRD-1)

3e-77

99) SYNW0399
( NP_896494.1 )

polysaccharide export protein

NC_005070
(Synechococcus sp. WH 8102)

8e-72

• Sequence Alignments

1) kpsC in NC_008563


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  987 bits (3739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

2) ECOK1_3363 in NC_017628


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  987 bits (3739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

3) ECOPMV1_03246 in NC_022370


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  987 bits (3739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

4) kpsC in NC_011742


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  987 bits (3739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

5) UM146_01650 in NC_017632


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  987 bits (3739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

6) kpsC in NC_007946


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  987 bits (3739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/675 (100%), Positives = 675/675 (100%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

7) ECSF_2775 in NC_013654


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  977 bits (3703),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 664/675 (99%), Positives = 672/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrnhqqqrnGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQR H QQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQ+MRAEKLRQRLVESKLSKYNLGADFSLPA AKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

8) kpsC in NC_011750


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  975 bits (3695),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 662/675 (99%), Positives = 674/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERADIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSQVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVS+VYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrDGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQR+GYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQ+MRAEKLRQRLVESKLSKYNLGADFSLPA AKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYSGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFY+GWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPLFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKP+FITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

9) kpsC in NC_017646


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  975 bits (3695),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 662/675 (99%), Positives = 674/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERADIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSQVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVS+VYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrDGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQR+GYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQ+MRAEKLRQRLVESKLSKYNLGADFSLPA AKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYSGWGLTVDEHRC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFY+GWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPLFITRKKAGRVI  660
            PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKP+FITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

10) kpsC in NC_017626


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  973 bits (3687),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 659/675 (98%), Positives = 674/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQNVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQ+V+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLRTATNRLSYSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRT+TNRLS+SRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAATACVVWGVKGEQQWRAEAQQKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAA+ACVVWGVKGEQQWRAEAQ+KSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGDISAELTA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKGDI+AELTA
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRREQKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRE+KLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

11) LF82_465 in NC_011993


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  969 bits (3672),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 658/675 (98%), Positives = 672/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQ+MRAEKLRQRLVESKLSKYNLGADFSLPA AKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPAELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IPAEL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYCRKLIMFCKVRFG  675
            RY RKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

12) NRG857_14605 in NC_017634


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  969 bits (3672),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 658/675 (98%), Positives = 672/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQ+MRAEKLRQRLVESKLSKYNLGADFSLPA AKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPAELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IPAEL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYCRKLIMFCKVRFG  675
            RY RKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

13) kpsC in NC_011745


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  967 bits (3664),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 655/675 (98%), Positives = 671/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERADIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHISRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRH+SRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSDLFTVlqwlqlqrrhlqqrDGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVSDLFTVLQWLQLQRRHLQQR+GYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPCDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKGKKVIL  480
            YDATRP DLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AK+KKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPAELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IPAEL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYCRKLIMFCKVRFG  675
            RY RKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

14) kpsC in NC_011751


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  964 bits (3652),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 653/675 (97%), Positives = 670/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCCIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDC IYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFAALRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFA LRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPTELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IP+EL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAAWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYA+WGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYCRKLIMFCKVRFG  675
            RY RKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

15) kpsC in NC_017631


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  963 bits (3650),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 653/675 (97%), Positives = 669/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCCIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDC IYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFAALRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFA LRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERTPHAYIIYKPHPDVLVGNRKGNIPTELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRER PHAYI+YKPHPDVLVGNRKG+IP+EL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRREQKLTIADLIYQALIVYPTYIHPTLLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRE+KLT+ADLIYQALIVYPTYIHPT LQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

16) kpsC in NC_017652


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  963 bits (3650),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 653/675 (97%), Positives = 669/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCCIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDC IYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFAALRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFA LRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERTPHAYIIYKPHPDVLVGNRKGNIPTELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRER PHAYI+YKPHPDVLVGNRKG+IP+EL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRREQKLTIADLIYQALIVYPTYIHPTLLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRE+KLT+ADLIYQALIVYPTYIHPT LQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

17) kpsC in NC_017651


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  963 bits (3650),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 653/675 (97%), Positives = 669/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCCIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDC IYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFAALRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFA LRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERTPHAYIIYKPHPDVLVGNRKGNIPTELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRER PHAYI+YKPHPDVLVGNRKG+IP+EL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRREQKLTIADLIYQALIVYPTYIHPTLLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRE+KLT+ADLIYQALIVYPTYIHPT LQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

18) kspC in NC_017644


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  963 bits (3650),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 653/675 (97%), Positives = 669/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCCIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDC IYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFAALRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFA LRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            DPQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERTPHAYIIYKPHPDVLVGNRKGNIPTELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRER PHAYI+YKPHPDVLVGNRKG+IP+EL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRREQKLTIADLIYQALIVYPTYIHPTLLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRE+KLT+ADLIYQALIVYPTYIHPT LQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

19) ECD_02818 in NC_012971


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  959 bits (3632),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 650/675 (97%), Positives = 668/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIFSSGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGI+S+GIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVKDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV+DKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLCATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADL ATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DLQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            D QTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLINHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVL+NHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPAKLIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IPA L A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTADEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLT DEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPIRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHP RLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

20) kpsC in NC_012892


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  959 bits (3632),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 650/675 (97%), Positives = 668/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIFSSGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGI+S+GIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVKDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV+DKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLCATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADL ATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DLQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            D QTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLINHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVL+NHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPAKLIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IPA L A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTADEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLT DEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPIRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHP RLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

21) ECB_02818 in NC_012967


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  959 bits (3632),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 650/675 (97%), Positives = 668/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIFSSGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSaakpvaiakaagk  60
            MIGI+S+GIWRIPHLEKFLAQPCQKLSLLRPVPQEV+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVKDKAGNTALISQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV+DKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLCATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADL ATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DLQTGEVSDLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
            D QTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLINHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVL+NHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPAKLIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IPA L A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTADEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLT DEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPIRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHP RLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

22) kpsC in NC_010498


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  956 bits (3623),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 653/675 (97%), Positives = 669/675 (99%), Gaps = 2/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQNVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQ+V+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLGLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120
            PVIRLEDGFVRSL+LGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFNDMSVTYGNAGPHEFaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  maeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  YPQTGEVSNLFTVlqwlqlqrrhlqqrNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRR  360
             PQTGEVS+LFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFL+T+TNRLSFSRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL  480
            YDATRPSDLEVLLNHSQLTLAQ+MRAEKLRQRLVESKLSKYNLGADFSLPA AKDKKVIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPTELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IP+EL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCILRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600
            ELADYQALDADIIQCI RADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERKLTLADLIYQALIVYPTYIHPTWLQPITVEEAAEYLIKTPRKPMFITRKKA--VI  658
            PRRERKLTLADLIYQALIVYPTYIHPT+LQPITVEEAAEYLI+TPRKPMFITRKKA  VI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  659  RYYRKLIMFCKVRFG  673
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

23) kpsC in NC_004431


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  950 bits (3601),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 644/675 (96%), Positives = 663/675 (99%), Gaps = 0/675 (0%)

Query  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQNVDAIAVWGHRPSaakpvaiakaagk  60
            MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQ+V+AIAVWGHRPSAAKPVAIAKAAGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   pviRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNAALADQAR  120
            PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGN+AL  QAR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  EAMHTIVTGDLSKYNLAPAFVADESERADIVLVVDQTFNDMSVTYGNAGPHefaamleaa  180
            EAMHTIVTGD+SKYNLAPAFVADESER++IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  meeNPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240
            M ENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300
            YGFEALLAGKPVTCFGQPWYA+WGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  DPLTGAASDLFTVlqwlqlqrnhqqqrnGYLWAPGLTLWKSAILKPFLCTATNRLSYSRR  360
            DP TG  SDLFTVLQWLQLQR H QQRNGYLWAPGLTLWKSAILKPFL T+TNRLS+SRR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CTAATACVVWGVKGEQQWLAEAQQKSLPLWRMEDGFlrssglgsdllpplslvldKRGIY  420
            CTAA+ACVVWGVKGEQQW AEAQ+KSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL  480
            YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA AKDKK+IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPTELIA  540
            VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYI+YKPHPDVLVGNRKG+IP+EL A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHC  600
            ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGK+VHCYGLPFYAGWGLTVDEH+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  601  PRRERRLTIADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660
            PRRER+LT+ADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  661  RYYRKLIMFCKVRFG  675
            RYYRKLIMFCKVRFG
Sbjct  661  RYYRKLIMFCKVRFG  675

24) Q7S_06565 in NC_017047


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  732 bits (2771),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 455/676 (68%), Positives = 561/676 (83%), Gaps = 5/676 (0%)

Query  1    MIGIFSAGIQRIPHLEAFLGEPCRKLSLLRPVPDGITRIAVWGYRPTGGKAVARAEQSGL  60
            MIGI+S+GI RIPHLE FL++PC+KLSLLRPVP+ +  IAVWG RP+++K+VA A  +G 
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   PVLRLEDGFIRSLGLGVSGCPPFSMVLETQGMYYDASKPSTLEMLIRQREENQPLQDTAR  120
            PV+RLEDGF+RSL+LGV+G PP+S+V++  G+YYDASKPS+LE L++++  N +L   AR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  QAMQIIVEGDLSKYNQAPACTKAKPE-CGAVLVVDQTFGDMAVVYGNAGAEQFEQMLQAA  179
            +AM+ IV GD+SKYN APA     +E    VLVVDQTF DM+V YGNAG+++F  ML+AA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  180  MAENPTSEIWVKIHPDVLQGKKAGYFTQITELAQQDPRIKLLAENVSPQsllrvvsrvyv  239
            MAENP +EIWVK+HPDVL+GKK+GYF+++    +   R++L+AENVSPQSLLR VSRVYV
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADL----RATQRVRLIAENVSPQSLLRHVSRVYV  236

Query  240  vTSNYGFEALIAGKPVSVFGQPWYAGWGLTDDRHPQSASLRARRGTASVEELFSAACLRY  299
            VTS+YGFEAL+AGKPV+ FGQPWYA+WGLTDDRHPQSA L ARRG+A++EELF+AA LRY
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRY  296

Query  300  SRYINPANGKSGTLFDVLSWLLMQRKHQQQRAGRLWSPGLTLWKRSILGPFLRTKSNKVN  359
             RYI+P  G  + LF VL WL +QR+H QQR G LW+PGLTLWK +IL PFLRT +N+++
Sbjct  297  CRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLS  356

Query  360  FSKRYAGEVACVVWGIKGEARWGAQAQQRQIPQWRMEDGFLRSAGLGSDLHPPLSLVLDK  419
            FS+R ++  ACVVWG+KGE +W A+AQ++ +P WRMEDGFLRS+GLGSDL PPLSLVLDK
Sbjct  357  FSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDK  416

Query  420  TGIYYDATRPSDLELLLSHSNLAPCqqqraatlrqrlVASKVSKYNLGAAFTLPAEATNK  479
             GIYYDATRPSDLE+LL+HS+L+  QQ RA  LRQRLV SK+SKYNLGA F+LPA A +K
Sbjct  417  RGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDK  476

Query  480  TVILVPGQVEDDASILTGTISLRTNSALLRTVRERNPGAYIIYKPHPDVLVGNRQGHIPA  539
             VILVPGQVEDDASI TGT+S+++N  LLRTVRERNP AYI+YKPHPDVLVGNR+G+IPA
Sbjct  477  KVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPA  536

Query  540  EDVSRWADSQALDADIIQCIQAADELHTLTSLSGFEALLHGKKVVCYGMPFYAGWGLTQD  599
            E  +  AD QALDADIIQCIQ ADE+HT+TSLSGFEALLHGK V CYG+PFYAGWGLT D
Sbjct  537  ELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVD  596

Query  600  EHACSRRLRSLTLDDVVYQALIAYPSYINPQSREPILAEQAVELLAATPRAQMQFTRVKA  659
            EH C+RR R LTL D++YQALI YP+YI+P   +PI  E+A E L  TPR  M +TR KA
Sbjct  597  EHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKA  656

Query  660  GRIVRYYRKLLMLVRV  675
            GR++RYYRKL+M+ +V
Sbjct  657  GRVIRYYRKLIMFCKV  672

25) Rahaq_1360 in NC_015061


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  732 bits (2771),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 455/676 (68%), Positives = 561/676 (83%), Gaps = 5/676 (0%)

Query  1    MIGIFSAGIQRIPHLEAFLGEPCRKLSLLRPVPDGITRIAVWGYRPTGGKAVARAEQSGL  60
            MIGI+S+GI RIPHLE FL++PC+KLSLLRPVP+ +  IAVWG RP+++K+VA A  +G 
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   PVLRLEDGFIRSLGLGVSGCPPFSMVLETQGMYYDASKPSTLEMLIRQREENQPLQDTAR  120
            PV+RLEDGF+RSL+LGV+G PP+S+V++  G+YYDASKPS+LE L++++  N +L   AR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  QAMQIIVEGDLSKYNQAPACTKAKPE-CGAVLVVDQTFGDMAVVYGNAGAEQFEQMLQAA  179
            +AM+ IV GD+SKYN APA     +E    VLVVDQTF DM+V YGNAG+++F  ML+AA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  180  MAENPTSEIWVKIHPDVLQGKKAGYFTQITELAQQDPRIKLLAENVSPQsllrvvsrvyv  239
            MAENP +EIWVK+HPDVL+GKK+GYF+++    +   R++L+AENVSPQSLLR VSRVYV
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADL----RATQRVRLIAENVSPQSLLRHVSRVYV  236

Query  240  vTSNYGFEALIAGKPVSVFGQPWYAGWGLTDDRHPQSASLRARRGTASVEELFSAACLRY  299
            VTS+YGFEAL+AGKPV+ FGQPWYA+WGLTDDRHPQSA L ARRG+A++EELF+AA LRY
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRY  296

Query  300  SRYINPANGKSGTLFDVLSWLLMQRKHQQQRAGRLWSPGLTLWKRSILGPFLRTKSNKVN  359
             RYI+P  G  + LF VL WL +QR+H QQR G LW+PGLTLWK +IL PFLRT +N+++
Sbjct  297  CRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLS  356

Query  360  FSKRYAGEVACVVWGIKGEARWGAQAQQRQIPQWRMEDGFLRSAGLGSDLHPPLSLVLDK  419
            FS+R ++  ACVVWG+KGE +W A+AQ++ +P WRMEDGFLRS+GLGSDL PPLSLVLDK
Sbjct  357  FSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDK  416

Query  420  TGIYYDATRPSDLELLLSHSNLAPCqqqraatlrqrlVASKVSKYNLGAAFTLPAEATNK  479
             GIYYDATRPSDLE+LL+HS+L+  QQ RA  LRQRLV SK+SKYNLGA F+LPA A +K
Sbjct  417  RGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDK  476

Query  480  TVILVPGQVEDDASILTGTISLRTNSALLRTVRERNPGAYIIYKPHPDVLVGNRQGHIPA  539
             VILVPGQVEDDASI TGT+S+++N  LLRTVRERNP AYI+YKPHPDVLVGNR+G+IPA
Sbjct  477  KVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPA  536

Query  540  EDVSRWADSQALDADIIQCIQAADELHTLTSLSGFEALLHGKKVVCYGMPFYAGWGLTQD  599
            E  +  AD QALDADIIQCIQ ADE+HT+TSLSGFEALLHGK V CYG+PFYAGWGLT D
Sbjct  537  ELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVD  596

Query  600  EHACSRRLRSLTLDDVVYQALIAYPSYINPQSREPILAEQAVELLAATPRAQMQFTRVKA  659
            EH C+RR R LTL D++YQALI YP+YI+P   +PI  E+A E L  TPR  M +TR KA
Sbjct  597  EHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKA  656

Query  660  GRIVRYYRKLLMLVRV  675
            GR++RYYRKL+M+ +V
Sbjct  657  GRVIRYYRKLIMFCKV  672

26) Entcl_3735 in NC_014618


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  709 bits (2683),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 418/675 (62%), Positives = 546/675 (81%), Gaps = 1/675 (0%)

Query  1    MIGIFSSGIWRIPHLEALLGQPCRRLSSLSAKARGLQAIAVWGERPTSQRPIALAKKAGL  60
            MIGI+S+GIWRIPHLE +L+QPC++LS L + ++ ++AIAVWG+RP++ +P+A+AK AG 
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   PVIRLEDGFIRSLGLGINGDPPLSIVTDDLGIYYDASRASRLEKLIQDSAGNAAFAARTL  120
            PVIRLEDGF+RSL+LG+NG+PPLS+V DD GIYYDAS++S LEKL+QD AGN+A+ +++ 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  QAIDMVVQNDLSKYNHAPPFSGSPTGK-ETVLVVDQTQGDVSVTLGGATERQFAAMLSRA  179
            +A++ +V  D+SKYN AP+F +  + + + VLVVDQT  D+SVT G A  ++FAAML  A
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  180  IAEHPDADIWVKTHPDVLCGKKRGYLSVLPDSSQVRLLAQDVSPQSLLRHVGHVYTVTSQ  239
            +AE+P+A+IWVK HPDVL GKK GY++ L  + +VRL+A++VSPQSLLRHV++VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  240  YGFEALIAGKKVTCFGLPWYAGWGLTDDRHPLAARLAERRGNASLSDLVSAAWFRYARYV  299
            YGFEAL+AGK VTCFG PWYA+WGLTDDRHP +A L+ RRG+A+L +L +AA +RY RY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  300  DPQTGTPCSLFRVLEHLKLQRAHHIIRRGALWAPGMTLWKGSIIKPFLKTTDNQLIFSKH  359
            DPQTG    LF VL+ L+LQR H   R G LWAPG+TLWK++I+KPFL+T  N+L FS++
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  360  PGNASVCIAWGVNGEKRWQPSAEKLGIPVWRMEDGFLRSAGLGSDLQPPLSLVLDKTGIY  419
               AS C+ WGV+GE++W++ A++ ++P+WRMEDGFLRS+GLGSDL PPLSLVLDK GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  420  YDATRPSDLEHLLNHSQLTPAQRLRAGALQQTLVTSKVSKYNLGARWRLPPEAAGRRVLL  479
            YDATRPSDLE LLNHSQLT AQ++RA  L+Q LV SK+SKYNLGA   LP+ A +++V+L
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  480  VPGQVENDASIATGTFSVNTNLSLLQTARSANPDAFIIYKPHPDVLAGNRPGHIPEETAG  539
            VPGQVE+DASI TGT S+++NL LL+T R  NP+A+I+YKPHPDVL GNR G+IP E ++
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  540  CLADIIVRDADIIECIQQVDEVHTMTSLCGFEALIHGKAVHCYGMPFYAGWGLTHDIHHC  599
             LAD    DADII+CIQ+ DEVHTMTSL GFEAL+HGK VHCYG+PFYAGWGLT D H+C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  600  QRRIRKLTLLDLIYQTLIIYPTYINPANKVIINVEQAIEILSFLPKEKLAGTKPKSSRCR  659
             RR RKLTL DLIYQ+LI+YPTYI+P+    I VE+A E L   P+  +  T+ K++R  
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  660  RVLKKAINLYKIKFD  674
            R  +K I + K++F+
Sbjct  661  RYYRKLIMFCKVRFG  675

27) kpsC in NC_013971


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  682 bits (2578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 388/674 (58%), Positives = 533/674 (80%), Gaps = 1/674 (0%)

Query  1    MIGIYSSGIWRIPHLANFLRERCHKVALRHALPAEVDAIAVWGYRPSGKKEVRAAQSAGK  60
            MIGIYS+GIWRIPHL +FL + C+K++L +++P EV+AIAVWG RPS+ K V  A++AGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   TLMRLEDGFIRSQGLGVEGASPFSMVVDRLGMYYDAGRPSTLERMIQDTPGNSVLAAEAE  120
             ++RLEDGF+RS +LGV+G +P+S+VVD  G+YYDA++PS+LE+++QD +GN+ L ++A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  DAMRTIVNEDLSKFNHALPFKRTTPIPSEVVLVVDQTAGDLSVKWGGGGATDFSRMVNAA  180
            +AM+TIV  D+SK+N A +F    +  +++VLVVDQT  D+SV  G +G+ +F+ M++AA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  LSENPNATIWVKVHPDVLSGSRQGYLGAVELDDRVHLFTEDVSPQSLLRVVTKVYVVTSQ  240
            ++ENP+A IWVKVHPDVL G + GY++ +   +RV+L++E+VSPQSLLR V++VYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  LGFEALLAGKPVVCFGLPWYAAWGLTDDRHSGAVCLAQRRGRASLTALFTAAYLRYSRYI  300
             GFEALLAGKPV CFG PWYA+WGLTDDRH+ +  L+ RRG A+L  LF+AAYLRY RYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  HPSNGQPARLSEVLEWLVRERQHGLQRVGHLWAPGLPLWKATMVKPFLHTRDNQLTMARR  360
            +P  G+ + L  VL+WL  +R+H  QR G LWAPGL LWK++++KPFL+T  N+L+ +RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CRPAEACVVWGIKGERRWSKLAQQRGIPVWRMENGLLRSSGHGSAQKPPLSLVLDKQGIY  420
            C +A ACVVWG+KGE++W   AQ++++P+WRME+G+LRSSG GS   PPLSLVLDK+GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDARRPSDLEQMLNNSQLSAQQATRAQRLHQRLVEQRTGKQNVG-HFRLPDAAAHRLAIL  479
            YDA RPSDLE +LN+SQL+  Q  RA++L+QRLVE + +K N+G +F LP  A ++  IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  480  VLGQVEDDISLATGALGVRTNHDLLHRVREDYPQAFIFYKPHPDALTGDMKGDISPDALS  539
            V GQVEDD S+ TG++++++N +LL+ VRE  P+A+I YKPHPD L G+ KGDI+++  +
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  540  GLADFDARDVDIIQCIMQADEVHTMTSLWGFEALLHGKRVHCYGLPFYAGWGLTDDEFPC  599
             LAD++A D DIIQCI +ADEVHTMTSL GFEALLHGK+VHCYGLPFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  600  ARRTRKLTRNDLIYQGLIAYPTYLDPHNYTVISPEDAVEILVETPHGRPCTMKrirrrir  659
            +RR RKLT  DLIYQ+LI YPTY++P     I+ E+A E L++TP+      ++   R+ 
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  660  HYFRQLMMFIKLKL  673
            +Y+R+L+MF K+++
Sbjct  661  RYYRKLIMFCKVRF  674

28) kpsC in NC_013961


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  682 bits (2578),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 388/674 (58%), Positives = 533/674 (80%), Gaps = 1/674 (0%)

Query  1    MIGIYSSGIWRIPHLANFLRERCHKVALRHALPAEVDAIAVWGYRPSGKKEVRAAQSAGK  60
            MIGIYS+GIWRIPHL +FL + C+K++L +++P EV+AIAVWG RPS+ K V  A++AGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   TLMRLEDGFIRSQGLGVEGASPFSMVVDRLGMYYDAGRPSTLERMIQDTPGNSVLAAEAE  120
             ++RLEDGF+RS +LGV+G +P+S+VVD  G+YYDA++PS+LE+++QD +GN+ L ++A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  DAMRTIVNEDLSKFNHALPFKRTTPIPSEVVLVVDQTAGDLSVKWGGGGATDFSRMVNAA  180
            +AM+TIV  D+SK+N A +F    +  +++VLVVDQT  D+SV  G +G+ +F+ M++AA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  LSENPNATIWVKVHPDVLSGSRQGYLGAVELDDRVHLFTEDVSPQSLLRVVTKVYVVTSQ  240
            ++ENP+A IWVKVHPDVL G + GY++ +   +RV+L++E+VSPQSLLR V++VYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  LGFEALLAGKPVVCFGLPWYAAWGLTDDRHSGAVCLAQRRGRASLTALFTAAYLRYSRYI  300
             GFEALLAGKPV CFG PWYA+WGLTDDRH+ +  L+ RRG A+L  LF+AAYLRY RYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  HPSNGQPARLSEVLEWLVRERQHGLQRVGHLWAPGLPLWKATMVKPFLHTRDNQLTMARR  360
            +P  G+ + L  VL+WL  +R+H  QR G LWAPGL LWK++++KPFL+T  N+L+ +RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CRPAEACVVWGIKGERRWSKLAQQRGIPVWRMENGLLRSSGHGSAQKPPLSLVLDKQGIY  420
            C +A ACVVWG+KGE++W   AQ++++P+WRME+G+LRSSG GS   PPLSLVLDK+GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDARRPSDLEQMLNNSQLSAQQATRAQRLHQRLVEQRTGKQNVG-HFRLPDAAAHRLAIL  479
            YDA RPSDLE +LN+SQL+  Q  RA++L+QRLVE + +K N+G +F LP  A ++  IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  480  VLGQVEDDISLATGALGVRTNHDLLHRVREDYPQAFIFYKPHPDALTGDMKGDISPDALS  539
            V GQVEDD S+ TG++++++N +LL+ VRE  P+A+I YKPHPD L G+ KGDI+++  +
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  540  GLADFDARDVDIIQCIMQADEVHTMTSLWGFEALLHGKRVHCYGLPFYAGWGLTDDEFPC  599
             LAD++A D DIIQCI +ADEVHTMTSL GFEALLHGK+VHCYGLPFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  600  ARRTRKLTRNDLIYQGLIAYPTYLDPHNYTVISPEDAVEILVETPHGRPCTMKrirrrir  659
            +RR RKLT  DLIYQ+LI YPTY++P     I+ E+A E L++TP+      ++   R+ 
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  660  HYFRQLMMFIKLKL  673
            +Y+R+L+MF K+++
Sbjct  661  RYYRKLIMFCKVRF  674

29) kpsC in NC_017445


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  680 bits (2572),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 387/674 (58%), Positives = 533/674 (80%), Gaps = 1/674 (0%)

Query  1    MIGIYSSGIWRIPYLANFLRERCHKVALRHALPAEVDAIAVWGYRPSGKKEVRAAQSAGK  60
            MIGIYS+GIWRIP L +FL + C+K++L +++P EV+AIAVWG RPS+ K V  A++AGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   TLMRLEDGFIRSLGLGVEGASPFSMVVDRLGMYYDAGRPSTLERLIQDTPGSSVLVAEAE  120
             ++RLEDGF+RSL+LGV+G +P+S+VVD  G+YYDA++PS+LE+L+QD +G++ L+++A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  DAMRTIVNEDLSKFNHALPFKRTTPMPSDVVLVVDQTAGDLSVKWGGGGATDFTRMVNAA  180
            +AM+TIV  D+SK+N A +F    +  +++VLVVDQT  D+SV  G +G+ +F+ M++AA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  LSENPYATIWVKVHPDVLSGSKQGYLGAVELDERVHLFTEDVSPQSLLRVVTKVYVVTSQ  240
            ++ENP A IWVKVHPDVL G K GY++ +   +RV+L++E+VSPQSLLR V++VYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  LGFEALLAGKPVVCFGLPWYAAWGLTDDRHSGAACLAERRGRASLTALFTAAYLRYSRYI  300
             GFEALLAGKPV CFG PWYA+WGLTDDRH+ +A L+ RRG A+L  LF+AAYLRY RYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  HPASGQPARLTEVLEWLVRERRHGLQRVGHLWAPGLPLWKATMVKPFLHTRDNQLTMARR  360
            +P +G+ + L  VL+WL  +RRH  QR G LWAPGL LWK++++KPFL+T  N+L+ +RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CRPAEACVVWGIKGEHRWGRLAQQRGIPVWRMENGLLRSSGHGAAQKPPLSLVLDKQGIY  420
            C +A ACVVWG+KGE++W   AQ++++P+WRME+G+LRSSG G+   PPLSLVLDK+GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDARRPSDLEQMLNNSQLSAQQATRAQRLHQRLVEQRTVKQDVD-HFQLPAAAANRLAIL  479
            YDA RPSDLE +LN+SQL+  Q  RA++L+QRLVE +  K +++ +F LPA A ++  IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  480  VLGQVEDDISLATGALGVRTNHDLLHRVRESYPQAFIFYKPHPNALAGDLKGDISSDALS  539
            V GQVEDD S+ TG++++++N +LL+ VRE  P+A+I YKPHP+ L G+ KGDI+++  +
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  540  RLADFDARDVDIIPCIMQADEVHTMTSLWGFEALLHGKRVHCYGLPFYAGWGLTDDELPC  599
             LAD++A D DII CI +ADEVHTMTSL GFEALLHGK+VHCYGLPFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  600  ARRTRKLTPNDLIYQGLIAYPTYLDPHTYTVISPEDAVAILVEAPHGRPCTMKKIRRRLR  659
            +RR RKLT  DLIYQ+LI YPTY++P     I+ E+A   L+++P+      +K   R+ 
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  660  HYFRQLMMFIKLRL  673
            +Y+R+L+MF K+R+
Sbjct  661  RYYRKLIMFCKVRF  674

30) kpsC in NC_017390


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  680 bits (2571),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/674 (58%), Positives = 533/674 (80%), Gaps = 1/674 (0%)

Query  1    MIGIYSSGIWRIPYLANFLRERCHKVALRHALPAEVDAIAVWGYRPSGKKEVRAAQSAGK  60
            MIGIYS+GIWRIP L +FL + C+K++L +++P EV+AIAVWG RPS+ K V  A++AGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   TLMRLEDGFIRSLGLGVEGASPFSMVVDRLGMYYDAGRPSTLERLIQDTPGSSVLVAEAE  120
             ++RLEDGF+RSL+LGV+G +P+S+VVD  G+YYDA++PS+LE+L+QD +G++ L+++A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  DAMRTIVNEDLSKFNHALPFKRTTPMPSDVVLVVDQTAGDLSVKWGGGGATDFTRMVNAA  180
            +AM+TIV  D+SK+N A +F    +  +++VLVVDQT  D+SV  G +G+ +F+ M++AA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  LSENPYATIWVKVHPDVLSGSKQGYLGAVELDERVHLFTEDVSPQSLLRVVTKVYVVTSQ  240
            ++ENP A IWVKVHPDVL G K GY++ +   +RV+L++E+VSPQSLLR V++VYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  LGFEALLAGKPVVCFGLPWYSAWGLTDDRHSGAACLAERRGRASLTALFTAAYLRYSRYI  300
             GFEALLAGKPV CFG PWY++WGLTDDRH+ +A L+ RRG A+L  LF+AAYLRY RYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  HPASGQPARLTEVLEWLVRERRHGLQRVGHLWAPGLPLWKATMVKPFLHTRDNQLTMARR  360
            +P +G+ + L  VL+WL  +RRH  QR G LWAPGL LWK++++KPFL+T  N+L+ +RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CRPAEACVVWGIKGEHRWGRLAQQRGIPVWRMENGLLRSSGHGAAQKPPLSLVLDKQGIY  420
            C +A ACVVWG+KGE++W   AQ++++P+WRME+G+LRSSG G+   PPLSLVLDK+GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDARRPSDLEQMLNNSQLSAQQATRAQRLHQRLVEQRTVKQDVD-HFQLPAAAANRLAIL  479
            YDA RPSDLE +LN+SQL+  Q  RA++L+QRLVE +  K +++ +F LPA A ++  IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  480  VLGQVEDDISLATGALGVRTNHDLLHRVRENYPQAFIFYKPHPNALAGDLKGDISPDALS  539
            V GQVEDD S+ TG++++++N +LL+ VRE  P+A+I YKPHP+ L G+ KGDI+++  +
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  540  RLADFDARDVDIIPCIMQADEVHTMTSLWGFEALLHGKRVHCYGLPFYAGWGLTDDELPC  599
             LAD++A D DII CI +ADEVHTMTSL GFEALLHGK+VHCYGLPFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  600  ARRTRKLTPNDLIYQGLIAYPTYLDPHTYTVISPEDAVAILVEAPHGRPCTMKKIRRRLR  659
            +RR RKLT  DLIYQ+LI YPTY++P     I+ E+A   L+++P+      +K   R+ 
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  660  HYFRQLMMFIKLRL  673
            +Y+R+L+MF K+R+
Sbjct  661  RYYRKLIMFCKVRF  674

31) kpsC in NC_012214


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  680 bits (2571),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/674 (58%), Positives = 533/674 (80%), Gaps = 1/674 (0%)

Query  1    MIGIYSSGIWRIPYLANFLRERCHKVALRHALPAEVDAIAVWGYRPSGKKEVRAAQSAGK  60
            MIGIYS+GIWRIP L +FL + C+K++L +++P EV+AIAVWG RPS+ K V  A++AGK
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  61   TLMRLEDGFIRSLGLGVEGASPFSMVVDRLGMYYDAGRPSTLERLIQDTPGSSVLVAEAE  120
             ++RLEDGF+RSL+LGV+G +P+S+VVD  G+YYDA++PS+LE+L+QD +G++ L+++A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  121  DAMRTIVNEDLSKFNHALPFKRTTPMPSDVVLVVDQTAGDLSVKWGGGGATDFTRMVNAA  180
            +AM+TIV  D+SK+N A +F    +  +++VLVVDQT  D+SV  G +G+ +F+ M++AA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  181  LSENPYATIWVKVHPDVLSGSKQGYLGAVELDERVHLFTEDVSPQSLLRVVTKVYVVTSQ  240
            ++ENP A IWVKVHPDVL G K GY++ +   +RV+L++E+VSPQSLLR V++VYVVTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  241  LGFEALLAGKPVVCFGLPWYSAWGLTDDRHSGAACLAERRGRASLTALFTAAYLRYSRYI  300
             GFEALLAGKPV CFG PWY++WGLTDDRH+ +A L+ RRG A+L  LF+AAYLRY RYI
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  301  HPASGQPARLTEVLEWLVRERRHGLQRVGHLWAPGLPLWKATMVKPFLHTRDNQLTMARR  360
            +P +G+ + L  VL+WL  +RRH  QR G LWAPGL LWK++++KPFL+T  N+L+ +RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  361  CRPAEACVVWGIKGEHRWGRLAQQRGIPVWRMENGLLRSSGHGAAQKPPLSLVLDKQGIY  420
            C +A ACVVWG+KGE++W   AQ++++P+WRME+G+LRSSG G+   PPLSLVLDK+GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  421  YDARRPSDLEQMLNNSQLSAQQATRAQRLHQRLVEQRTVKQDVD-HFQLPAAAANRLAIL  479
            YDA RPSDLE +LN+SQL+  Q  RA++L+QRLVE +  K +++ +F LPA A ++  IL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  480  VLGQVEDDISLATGALGVRTNHDLLHRVRENYPQAFIFYKPHPNALAGDLKGDISPDALS  539
            V GQVEDD S+ TG++++++N +LL+ VRE  P+A+I YKPHP+ L G+ KGDI+++  +
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  540  RLADFDARDVDIIPCIMQADEVHTMTSLWGFEALLHGKRVHCYGLPFYAGWGLTDDELPC  599
             LAD++A D DII CI +ADEVHTMTSL GFEALLHGK+VHCYGLPFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  600  ARRTRKLTPNDLIYQGLIAYPTYLDPHTYTVISPEDAVAILVEAPHGRPCTMKKIRRRLR  659
            +RR RKLT  DLIYQ+LI YPTY++P     I+ E+A   L+++P+      +K   R+ 
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

Query  660  HYFRQLMMFIKLRL  673
            +Y+R+L+MF K+R+
Sbjct  661  RYYRKLIMFCKVRF  674

32) kpsC in NC_013282


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  616 bits (2327),  Expect = 2e-177, Method: Compositional matrix adjust.
 Identities = 399/645 (62%), Positives = 500/645 (78%), Gaps = 2/645 (0%)

Query  2    VTGIFSKGIWRIPGLAHLLPMPCRKLTPRRAIPDDITAIAVWGHRPSaaaaeararqagr  61
            + GI+S GIWRIP L  +L+ PC+KL+  R++P+++ AIAVWGHRPSAA + A A+ AG+
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  62   aVIRLEDGFIRSAGPAVHGHPPLSLVIDYDGIYYDASKQSTLEKLIQDRPGNDAHCEAAQ  121
            +VIRLEDGF+RS + +V+G+PPLSLV+D  GIYYDASK S+LEKL+QD++GN A    A+
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  122  EAMRLIVQGDLAKYNHAPPF--DGAPETRAVLVVDQTAGDMSVTLGNASAASFRLMLEVA  179
            EAM+ IV GD++KYN AP+F  D +  T  VLVVDQT  DMSVT GNA++  F  MLE A
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  180  CAENPGAEIWVKTHPDVVSGHKRGYLRDMCADGRVRQIAQDASPQSLLRCVERVYTVTSH  239
             AENP AEIWVK HPDV+ G K GY+ D+ A  RVR IA++ SPQSLLR V RVY VTS+
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  240  YGFEALMAGKPVVCFGQPWYAGWGLTDDRHPaaatlaarrgkatlltlFSAAYLRYARYL  299
            YGFEAL+AGKPV CFGQPWYA+WGLTDDRHP +A L+ARRG ATL  LF+AAYLRY RY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  300  NPQTGEPGTLFDVLSWLTLQRRHQLALRGTLWTPGLTLWKRSIVKPFLATPYNRLRFMRR  359
            +PQTGE + LF VL WL LQRRH     G LW+PGLTLWK +I+KPFL TP NRL F RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  360  VPQADACVVWGTAGEARWQVAAQAHGLPVWRMEDAFLRSAGLGSDLFAPLSLVLDKRGLY  419
               A ACVVWG  GE +W+  AQ  +LP+WRMED+FLRS+GLGSDL++PLSLVLDKRG+Y
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  420  YDATRASDLEVALSEAHLTPAQEMRAERLRQQIIENGVSKYNAGGAWRLPSSAWGRRVLL  479
            YDATR+SDLEV L++++LT AQ+MRAE+LRQ+++E+ +SKYN G+   LP+ A +++V+L
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  480  VPGQVSDDASLAGGTKDIrtltallrlvrarNPRAYIVFKAHPDVAAGNRSGEPSEQDAL  539
            VPGQV DDAS+  GT  I++   LLR VR RNP+AYIV+K+HPDV  GNR G+ + + + 
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  540  RWADCLATQADIAGVLEQVDEVHTLTSLTGFEALLRGKTVYCYGMPFYAGWGLTHDEYTC  599
              AD  A +ADI   +++ DEVHT+TSL+GFEALL+GK V CYG+PFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  600  PRRTRRLTLNALIHATLIDYPFYLHPTRKTPMSAEEAVARLSVSP  644
            PRR R+LTL  LI  +LI YP Y+HPTR  P++ EEA   L  +P
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTP  645

33) ESA_03352 in NC_009778


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  597 bits (2255),  Expect = 9e-172, Method: Compositional matrix adjust.
 Identities = 394/655 (61%), Positives = 515/655 (79%), Gaps = 2/655 (0%)

Query  5    VTGIFSKGIWRIAGLHHLLPMPCRKLAPRRAIPDDVTAIAVWGRRPSaaaavaraskagl  64
            + GI+S GIWRI+ L+ +L+ PC+KL+  R++P++V AIAVWG+RPSAA +VA A  AG 
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  65   aVIRLEDGFIRSCGPAAHGYPPLSLVIDYDGIYYDASQPSTLENLIQDTAGNAALREAAQ  124
            +VIRLEDGF+RS + + +G PPLSLV+D  GIYYDAS+PS+LE+L+QD AGN+AL   A+
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  125  EAMRLIVEGDLAKYNHAPPFDGSPDARA--VLVVDQTAGDMSVTFGNASAASFRLMLESA  182
            EAM+ IV GD++KYN AP+F +    R+  VLVVDQT  DMSVT+GNA++  F  MLE+A
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  183  LAENPDAEIWVKTHPDVVHGGKRGYLRDIRANTRLRLITEDASPQSLLRCVSRVYTVTSH  242
            +AENP+AEIWVK HPDV++G K GY+ D+RA  R+RLI+E+ SPQSLLR VSRVY VTS+
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  243  FGFEALMAGKPVVCFGQPWYAGWGLTddrhpaaatlaarrgdaSLLTLFSAAYLRYARYL  302
            +GFEAL+AGKPV CFGQPWYA+WGLTDDRHP +A L+ARRG A+L  LF+AAYLRY RY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  303  NPQTNQPGTLFDVLTWlalqrrhhlalrGTLWVPGLTLWKRSVVKPFLSTPRNQLRFTRR  362
            +PQT + + LF VL WL LQRRH     G LW PGLTLWK +++KPFL TP N+L F+RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  363  APQADACVVWGTAGEARWQSTAQARGMPVWRMEDAFLRSVGLGSDLFAPLSLVLDKRGLY  422
               A ACVVWG  GE +W++ AQ +++P+WRMED+FLRS GLGSDL++PLSLVLDKRG+Y
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  423  YDATRASDLEIALNRVHLTPaeearaaalrrQIIESRVSKYNAGGAWRLPASAWGRRILL  482
            YDATR+SDLE+ LN+ +LT A++ RA  LR++++ES++SKYN G+   LPA A +++++L
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  483  VPGQVSDDASLVGGTQGIRTIAALLRMVRARNPQAYIVFKPHPDVACGNRQGEPSTRDAL  542
            VPGQV DDAS+  GT +I++   LLR VR RNP+AYIV+KPHPDV  GNR+G+ ++  + 
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  543  RWADCLATQADIVDVLDQVDEVHTLTSLAGFEALLRGKTVFCYGMPFYAGWGLTHDEYPC  602
              AD  A +ADI++ +++ DEVHT+TSL+GFEALL+GK V CYG+PFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  603  PRRTRRLTLNALIHTTLIDYPFYLHPTRKTPIaaeeavallsasPRRNVTQHRRR  657
            PRR R+LTL  LI  +LI YP Y+HPTR  PI+ EEA   L  +PR+ +   R++
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKK  655

34) kpsC in NC_017933


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  593 bits (2240),  Expect = 1e-170, Method: Compositional matrix adjust.
 Identities = 394/655 (61%), Positives = 514/655 (79%), Gaps = 2/655 (0%)

Query  5    VTGIFSKGIWRIAGLHHLLPMPCRKLAPRRAIPDDVTAIAVWGrrpsaaaavararkaGL  64
            + GI+S GIWRI+ L+ +L+ PC+KL+  R++P++V AIAVWG+RPSAA +VA A+ AG 
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  65   TVIRLEDGFIRSCGPAAHGYPTLSLVIDYDGIYYDASQPSTLENLIQDTAGNAALREAAQ  124
             VIRLEDGF+RS + + +G P LSLV+D  GIYYDAS+PS+LE+L+QD AGN+AL   A+
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  125  EAMRLIVEGDLAKYNHAPPFDGSPDARA--VLVVDQTAGDMSVTFGNASAASFRLMLESA  182
            EAM+ IV GD++KYN AP+F +    R+  VLVVDQT  DMSVT+GNA++  F  MLE+A
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  183  LAENPDAEIWVKTHPDVVHGGKRGYLRDIRANTRLRLITEDASPQSLLRCVSRVYTVTSH  242
            +AENP+AEIWVK HPDV++G K GY+ D+RA  R+RLI+E+ SPQSLLR VSRVY VTS+
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  243  FGFEALMAGKPVVCFGQPWYAGWGLTDDrhpaaatlaarrgnaSLLTLFSAAYLRYARYL  302
            +GFEAL+AGKPV CFGQPWYA+WGLTDDRHP +A L+ARRG+A+L  LF+AAYLRY RY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  303  NPQTNQPGTLFDVLTWlalqrrhhlalrGTLWVPGLTLWKRSVVKPFLSTPYNRLRFTRR  362
            +PQT + + LF VL WL LQRRH     G LW PGLTLWK +++KPFL TP NRL F+RR
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  363  APQADACVVWGTAGEARWQSTTQARGMPVWRMEDAFLRSVGLGSDLFAPLSLVLDKRGLY  422
               A ACVVWG  GE +W++ +Q +++P+WRMED+FLRS GLGSDL++PLSLVLDKRG+Y
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  423  YDATRASDLEIALNRVHLTPaeearaaalrrQIIESRVSKYNAGGAWRLPASAWGRRILL  482
            YDATR+SDLE+ LN+ +LT A++ RA  LR++++ES++SKYN G+   LPA A +++++L
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  483  VPGQVSDDASLVDGTQGIRTIAALLRMVRARNPQAYIVFKPHPDVACGNRQGEPSARDAL  542
            VPGQV DDAS+  GT +I++   LLR VR RNP+AYIV+KPHPDV  GNR+G+ +A  + 
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  543  RWADCLATQADIVDVLDQVDEVHTLTSLAGFEALLRGKTVFCYGMPFYAGWGLTHDEYPC  602
              AD  A +ADI++ +++ DEVHT+TSL+GFEALL+GK V CYG+PFYAGWGLT DE  C
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC  600

Query  603  PRRTRRLTLNALIHTTLIDYPFYRHPTRKTPIaaeeavallsasPRRNVTHHRRR  657
            PRR R+LTL  LI  +LI YP Y HPTR  PI+ EEA   L  +PR+ +   R++
Sbjct  601  PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKK  655

35) lipA2 in NC_010278


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  497 bits (1873),  Expect = 1e-141, Method: Compositional matrix adjust.
 Identities = 314/636 (50%), Positives = 455/636 (72%), Gaps = 17/636 (2%)

Query  11   IFSRGILKIPHLNAFLHDS--ELISYSRLTKTIRADNVIGWGLRPSAGKARAYAEQHYLP  68
            I+S GI +IPHL+ FL ++   L     + + +  + +  WG RPSA+K+ A A     P
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV--NAIAVWGHRPSAAKPVAIAKAAGKP  61

Query  69   YIALEDGFLRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQ  128
             I LEDGF+RSL+LGV G PP+S+V DD GIYYD++++S LE+L+     +++ + QA +
Sbjct  62   VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQARE  121

Query  129  AVRLIVRHQLSKYNHNPDYVSNGPKTSEIVLVIDQTFGDMAVKYGRANESDFQQMLDAAI  188
            A++ IV  ++SKYN  P +V++ +  ++IVLV+DQTF DM+V YG A   +F  ML+AA+
Sbjct  122  AMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  189  GENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEDVNPISLLNRIDKVYCVTSQ  248
            +ENP+A+IWVK HPDV+ GKK GY++DL R  +R+RL+AE+V+P SLL ++ +VY VTSQ
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADL-RATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  249  MGFEALLLGKPVITFGIPWFAGWGVTEDRHPDIDVLKRSQRRENRSFLQLFAAAYLQYSR  308
             GFEALL GKPV  FG PW+A+WG+T+DRHP+  +L  S RR + ++ +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  309  YINPYSGKVGTIFDVIDYLSKAKILNQRLGGHLYCIGMSLWKRAVIKPFFNLPLCQLHFV  368
            YI+P +G V+ +F V++ L   +   Q+  G L   G++LWK A++KPF+  P  +L F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSF-  357

Query  369  GSLKTLEKRTLEKDAKLLIWS-QGKPEVLAYSEKHHIPLLRMEDGFIRSVGLGSNLVAPL  427
                   +R     A + +W+ +G  +  A +++  +PL RMEDGF+RS GLGS+L++PL
Sbjct  358  ------SRRCTAASACV-VWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  428  SLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNVGSA-GFQ  486
            SLV+D  GIY++A  PS LE +L H +++  + + A KL+ RL+E++++KYN+G+  ++ 
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLP  470

Query  487  LNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPDVVSGNR  546
             +  DK+ ILVPGQVEDDASI+ G+  IK NL+LLR VRE NP+AYI+YKPHPDV+ GNR
Sbjct  471  AKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNR  530

Query  547  QGHIPTEQAVEFADEIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYGLPFYSN  606
            +G+IP+E + E+AD    +A+I++CI++ DEVHTMTSL+GFEALL+GK VHCYGLPFY+ 
Sbjct  531  KGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAG  590

Query  607  WGLTEDYLSLERRHRKLCLEELISAVLVYYPQYVDP  642
            WGLT D     RR+RKL L +LI   L+ YP Y++P
Sbjct  591  WGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHP  626


 Score =  119 bits (433),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 114/336 (34%), Positives = 196/336 (59%), Gaps = 28/336 (8%)

Query  18   KIPHLNAFLHD-SELISYSRLTKTIRADNVIGWGLRPSAGKARAYAEQHYLPYIALEDGF  76
            K + L++FL+  ++ +S+SR  +   A   + WG++ +  + RA A++  LP   +EDGF
Sbjct  340  KSAILKPFLRTPTNRLSFSR--RCTAASACVVWGVK-GEQQWRAEAQRKSLPLWRMEDGF  396

Query  77   LRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQAVRLIVRH  136
            LRS GLG    PP+S+V D  GIYYD+TR+S LE L+  S+++ ++  +AE+  + +V  
Sbjct  397  LRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVES  456

Query  137  QLSKYNHNPDY-VSNGPKTSEIVLVIDQTFGDMAVKYGRANESDFQQMLDAAIGENPDAQ  195
            +LSKYN  +D+ ++  +K   ++LV +Q  +D ++K G  +     ++L +    NP+A 
Sbjct  457  KLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAY  516

Query  196  IWVKTHPDVISGKKKGYL-----TDLHRYGNRIRLFAEDVNPISLLNRIDKVYCVTSQMG  250
            I  K HPDV+ G++KG +     ++L  Y       A D + I  ++R D V  +TS  G
Sbjct  517  IVYKPHPDVLVGNRKGDIPAELTAELADYQ------ALDADIIQCIQRADEVHTMTSLSG  570

Query  251  FEALLLGKPVITFGIPWFAGWGVTEDRHPDIDVLKRSQRRENR-SFLQLFAAAYLQYSRY  309
            FEALL GK V  +G+P +AGWG+T D H       R  RRE + ++ +L+  A + Y+ Y
Sbjct  571  FEALLHGKHVHCYGLPFYAGWGLTVDEH-------RCPRRERKLTLADLIYQALIVYPTY  623

Query  310  INPYSGKVGTIFDVIDYL----SKAKILNQRLGGHL  341
            I+P   +  T+ +  +YL     K+ ++ ++ +G++
Sbjct  624  IHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRV  659


 Score =  116 bits (423),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 100/314 (32%), Positives = 180/314 (58%), Gaps = 23/314 (7%)

Query  347  SLWKRAVIKPFFNLPLCQLHFVGSLKTLEKRTLEKDAKLLIWSQ--GKPEVLAYSEKHHI  404
            ++W+ + +  F+  P CQ      L  L +   +    + +W++  + +  +A +     
Sbjct  8    GIWRIPHLEKFLAQP-CQ-----KLSLL-RPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  405  PLLRMEDGFIRSVGLGSNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLV-LA  463
            P++R+EDGF+RS++LG N  +PLSLV+DD GIY++A  PS LE  L+++  ++  L+  A
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEK-LVQDKAGNTALISQA  119

Query  464  KKLQTRLLEANIGKYNVGSAGFQLNVTDKRTI-LVPGQVEDDASIRFGSPEIKKNLDLLR  522
            +     ++ ++++KYN+++A F  + +++  I LV +Q  +D S+ +G++       +L 
Sbjct  120  REAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  523  KVRELNPNAYIIYKPHPDVVSGNRQG---HIPTEQAVEFADEIVENANILDCINQVDEVH  579
                 NP+A I  K HPDV+ G++ G   ++ + Q V +  E V   ++L    +V  V 
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLL---RHVSRVY  235

Query  580  TMTSLAGFEALLRGKIVHCYGLPFYSNWGLTEDYLS----LERRHRKLCLEELISAVLVY  635
             +TS  GFEALL GK V C+G P Y++WGLT+D  +    L  R+    LEEL++A  + 
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLR  295

Query  636  YPQYVDPENATMIN  649
            Y +Y+DP+ + + +
Sbjct  296  YCRYIDPQTGEVSD  309

36) APP7_1756 in NC_010939


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  495 bits (1868),  Expect = 3e-141, Method: Compositional matrix adjust.
 Identities = 319/637 (51%), Positives = 458/637 (72%), Gaps = 19/637 (2%)

Query  11   IFSRGILKIPHLNAFLHDS--ELISYSRLTKTIRADNVIGWGLRPSADKARAYAEQHYLP  68
            I+S GI +IPHL+ FL ++   L     + + +  + +  WG RPSA K+ A A     P
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV--NAIAVWGHRPSAAKPVAIAKAAGKP  61

Query  69   YIALEDGFLRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQ  128
             I LEDGF+RSL+LGV G PP+S+V DD GIYYD++++S LE+L+     +++ + QA +
Sbjct  62   VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQARE  121

Query  129  AVRLIVRHQLSKYNHNLDYVSNEPKTSEIVLVIDQTFGDMAVKYGRANESDFQQMLDAAI  188
            A++ IV  ++SKYN    +V++E+  ++IVLV+DQTF DM+V YG A   +F  ML+AA+
Sbjct  122  AMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  189  GENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEDVNPISLLSRVDKVYCVTSQ  248
            +ENP+A+IWVK HPDV+ GKK GY++DL R  +R+RL+AE+V+P SLL +V +VY VTSQ
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADL-RATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  249  MGFEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFAAAYLQYSR  308
             GFEALL GK V  FG PW+A+WG+TDDRHP+  +L    RR + ++ +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  309  YINPYSGKVGTIFDVIDYLS-KVKILNQRLSGHLYCVGMSLWKRAVIKPFFNLPLCRLHF  367
            YI+P +G V+ +F V++ L  + + L+QR +G L   G++LWK A++KPF+  P  RL F
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQR-NGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  368  VGSLKSLEKRVFEKNARLLLWS-QGKPEILAFAEKHNLPLLRMEDGFIRSVGLGSNLVAP  426
                    +R    +A ++ W+ +G  +  A A++ +LPL RMEDGF+RS GLGS+L++P
Sbjct  358  -------SRRCTAASACVV-WGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPP  409

Query  427  LSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNVGSA-GF  485
            LSLV+D  GIY++A  PS LE +L H +++  + + A KL+ RL+E++++KYN+G+  ++
Sbjct  410  LSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSL  469

Query  486  QLNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPDVVSGN  545
              +  DK+ ILVPGQVEDDASI+ G+  IK NL+LLR VRE NP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  546  RQGHIPTEQAVEFADEIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYGLPFYS  605
            R+G+IP+E + E+AD    +A+I++CI++ DEVHTMTSL+GFEALL+GK VHCYGLPFY+
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  606  NWGLTEDYLSLERRHRKLCLEELISAVLVYYPQYVDP  642
             WGLT D     RR+RKL L +LI   L+ YP Y++P
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHP  626


 Score =  116 bits (425),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 102/314 (33%), Positives = 183/314 (59%), Gaps = 23/314 (7%)

Query  347  SLWKRAVIKPFFNLPLCRLHFVGSLKSLEKRVFEKNARLLLWSQ--GKPEILAFAEKHNL  404
            ++W+ + +  F+  P C+      L SL + V +    + +W++  + +  +A+A     
Sbjct  8    GIWRIPHLEKFLAQP-CQ-----KL-SLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  405  PLLRMEDGFIRSVGLGSNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLV-LA  463
            P++R+EDGF+RS++LG N  +PLSLV+DD GIY++A  PS LE  L+++  ++  L+  A
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEK-LVQDKAGNTALISQA  119

Query  464  KKLQTRLLEANIGKYNVGSAGFQLNVTDKRTI-LVPGQVEDDASIRFGSPEIKKNLDLLR  522
            +     ++ ++++KYN+++A F  + +++  I LV +Q  +D S+ +G++       +L 
Sbjct  120  REAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  523  KVRELNPNAYIIYKPHPDVVSGNRQG---HIPTEQAVEFADEIVENANILDCINQVDEVH  579
                 NP+A I  K HPDV+ G++ G   ++ + Q V +  E V   ++L    +V  V 
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLL---RHVSRVY  235

Query  580  TMTSLAGFEALLRGKIVHCYGLPFYSNWGLTEDYLS----LERRHRKLCLEELISAVLVY  635
             +TS  GFEALL GK V C+G P Y++WGLT+D  +    L  R+    LEEL++A  + 
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLR  295

Query  636  YPQYVDPENATMIN  649
            Y +Y+DP+ + + +
Sbjct  296  YCRYIDPQTGEVSD  309


 Score =  116 bits (423),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 109/317 (35%), Positives = 185/317 (59%), Gaps = 22/317 (6%)

Query  18   KIPHLNAFLHD-SELISYSRLTKTIRADNVIGWGLRPSADKARAYAEQHYLPYIALEDGF  76
            K + L++FL+  ++ +S+SR  +   A   + WG++ + ++ RA A++  LP   +EDGF
Sbjct  340  KSAILKPFLRTPTNRLSFSR--RCTAASACVVWGVK-GEQQWRAEAQRKSLPLWRMEDGF  396

Query  77   LRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQAVRLIVRH  136
            LRS GLG    PP+S+V D  GIYYD+TR+S LE L+  S+++ ++  +AE+  + +V  
Sbjct  397  LRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVES  456

Query  137  QLSKYNHNLDY-VSNEPKTSEIVLVIDQTFGDMAVKYGRANESDFQQMLDAAIGENPDAQ  195
            +LSKYN   D+ ++  +K   ++LV +Q  +D ++K G  +     ++L +    NP+A 
Sbjct  457  KLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAY  516

Query  196  IWVKTHPDVISGKKKGYL-----TDLHRYGNRIRLFAEDVNPISLLSRVDKVYCVTSQMG  250
            I  K HPDV+ G++KG +     ++L  Y       A D + I  + R D V  +TS  G
Sbjct  517  IVYKPHPDVLVGNRKGDIPAELTAELADYQ------ALDADIIQCIQRADEVHTMTSLSG  570

Query  251  FEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFAAAYLQYSRYI  310
            FEALL GK V  +G+P +AGWG+T D H      +  +R ++ ++ +L+  A + Y+ YI
Sbjct  571  FEALLHGKHVHCYGLPFYAGWGLTVDEH------RCPRRERKLTLADLIYQALIVYPTYI  624

Query  311  NPYSGKVGTIFDVIDYL  327
            +P   +  T+ +  +YL
Sbjct  625  HPTRLQPITVEEAAEYL  641

37) kpsC in NC_009053


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  494 bits (1862),  Expect = 1e-140, Method: Compositional matrix adjust.
 Identities = 319/637 (51%), Positives = 457/637 (72%), Gaps = 19/637 (2%)

Query  11   IFSRGILKIPHLNAFLHDS--ELISYSRLTKTIRADNVIGWGLRPSADKARAYAEQHYLP  68
            I+S GI +IPHL+ FL ++   L     + + +  + +  WG RPSA K+ A A     P
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEV--NAIAVWGHRPSAAKPVAIAKAAGKP  61

Query  69   YIALEDGFLRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQ  128
             I LEDGF+RSL+LGV G PP+S+V DD GIYYD++++S LE+L+     +++ + QA +
Sbjct  62   VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQARE  121

Query  129  AVRLIVRHQLSKYNHNLDYVSNEPKTSEIVLVIDQTFGDMAVKYGRANESDFQQMLDAAI  188
            A++ IV  ++SKYN    +V++E+  ++IVLV+DQTF DM+V YG A   +F  ML+AA+
Sbjct  122  AMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  189  GENPDAQIWVKTHPDVISGKKKGYLTDLHRYGNRIRLFAEYVNPISLLSRVDKVYCVTSQ  248
            +ENP+A+IWVK HPDV+ GKK GY++DL R  +R+RL+AE V+P SLL +V +VY VTSQ
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADL-RATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  249  MGFEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFAAAYLQYSR  308
             GFEALL GK V  FG PW+A+WG+TDDRHP+  +L    RR + ++ +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  309  YINPYSGKVGTIFDVIDYLS-KVKILNQRLSGHLYCVGMSLWKRAVIKPFFNLPLCRLHF  367
            YI+P +G V+ +F V++ L  + + L+QR +G L   G++LWK A++KPF+  P  RL F
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQR-NGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  368  VGSLKSLEKRVFEKNARLLLWS-QGKPEILAFAEKHNLPLLRMEDGFIRSVGLGSNLVAP  426
                    +R    +A ++ W+ +G  +  A A++ +LPL RMEDGF+RS GLGS+L++P
Sbjct  358  -------SRRCTAASACVV-WGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPP  409

Query  427  LSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLVLAKKLQTRLLEANIGKYNVGSA-GF  485
            LSLV+D  GIY++A  PS LE +L H +++  + + A KL+ RL+E++++KYN+G+  ++
Sbjct  410  LSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSL  469

Query  486  QLNVTDKRTILVPGQVEDDASIRFGSPEIKKNLDLLRKVRELNPNAYIIYKPHPDVVSGN  545
              +  DK+ ILVPGQVEDDASI+ G+  IK NL+LLR VRE NP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  546  RQGHIPTEQAVEFADEIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYGLPFYS  605
            R+G+IP+E + E+AD    +A+I++CI++ DEVHTMTSL+GFEALL+GK VHCYGLPFY+
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  606  NWGLTEDYLSLERRHRKLCLEELISAVLVYYPQYVDP  642
             WGLT D     RR+RKL L +LI   L+ YP Y++P
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHP  626


 Score =  116 bits (424),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 102/314 (33%), Positives = 183/314 (59%), Gaps = 23/314 (7%)

Query  347  SLWKRAVIKPFFNLPLCRLHFVGSLKSLEKRVFEKNARLLLWSQ--GKPEILAFAEKHNL  404
            ++W+ + +  F+  P C+      L SL + V +    + +W++  + +  +A+A     
Sbjct  8    GIWRIPHLEKFLAQP-CQ-----KL-SLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  405  PLLRMEDGFIRSVGLGSNLVAPLSLVIDDLGIYFNAQTPSRLEEILLHQEFSEQDLV-LA  463
            P++R+EDGF+RS++LG N  +PLSLV+DD GIY++A  PS LE  L+++  ++  L+  A
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEK-LVQDKAGNTALISQA  119

Query  464  KKLQTRLLEANIGKYNVGSAGFQLNVTDKRTI-LVPGQVEDDASIRFGSPEIKKNLDLLR  522
            +     ++ ++++KYN+++A F  + +++  I LV +Q  +D S+ +G++       +L 
Sbjct  120  REAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  523  KVRELNPNAYIIYKPHPDVVSGNRQG---HIPTEQAVEFADEIVENANILDCINQVDEVH  579
                 NP+A I  K HPDV+ G++ G   ++ + Q V +  E V   ++L    +V  V 
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLL---RHVSRVY  235

Query  580  TMTSLAGFEALLRGKIVHCYGLPFYSNWGLTEDYLS----LERRHRKLCLEELISAVLVY  635
             +TS  GFEALL GK V C+G P Y++WGLT+D  +    L  R+    LEEL++A  + 
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLR  295

Query  636  YPQYVDPENATMIN  649
            Y +Y+DP+ + + +
Sbjct  296  YCRYIDPQTGEVSD  309


 Score =  115 bits (421),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 109/317 (35%), Positives = 186/317 (59%), Gaps = 22/317 (6%)

Query  18   KIPHLNAFLHD-SELISYSRLTKTIRADNVIGWGLRPSADKARAYAEQHYLPYIALEDGF  76
            K + L++FL+  ++ +S+SR  +   A   + WG++ + ++ RA A++  LP   +EDGF
Sbjct  340  KSAILKPFLRTPTNRLSFSR--RCTAASACVVWGVK-GEQQWRAEAQRKSLPLWRMEDGF  396

Query  77   LRSLGLGVMGYPPFSVVYDDVGIYYDTTRSSRLEQLILSSHFSATDLQQAEQAVRLIVRH  136
            LRS GLG    PP+S+V D  GIYYD+TR+S LE L+  S+++ ++  +AE+  + +V  
Sbjct  397  LRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVES  456

Query  137  QLSKYNHNLDY-VSNEPKTSEIVLVIDQTFGDMAVKYGRANESDFQQMLDAAIGENPDAQ  195
            +LSKYN   D+ ++  +K   ++LV +Q  +D ++K G  +     ++L +    NP+A 
Sbjct  457  KLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAY  516

Query  196  IWVKTHPDVISGKKKGYL-----TDLHRYGNRIRLFAEYVNPISLLSRVDKVYCVTSQMG  250
            I  K HPDV+ G++KG +     ++L  Y     L A+ ++ I    R D V  +TS  G
Sbjct  517  IVYKPHPDVLVGNRKGDIPAELTAELADYQA---LDADIIQCIQ---RADEVHTMTSLSG  570

Query  251  FEALLLGKKVVTFGIPWFAGWGITDDRHPDIDILKLEQRRKNRSFIQLFAAAYLQYSRYI  310
            FEALL GK V  +G+P +AGWG+T D H      +  +R ++ ++ +L+  A + Y+ YI
Sbjct  571  FEALLHGKHVHCYGLPFYAGWGLTVDEH------RCPRRERKLTLADLIYQALIVYPTYI  624

Query  311  NPYSGKVGTIFDVIDYL  327
            +P   +  T+ +  +YL
Sbjct  625  HPTRLQPITVEEAAEYL  641

38) F382_08125 in NC_021743


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  483 bits (1820),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 332/681 (49%), Positives = 471/681 (70%), Gaps = 22/681 (3%)

Query  6    VFFSKIIKIPNLKGFLPH-CEIRRRPLVGKTFIAQKRPNQIIGWGLRPSAVGSRAYAQKH  64
            ++ + I +IP+L  FL++ C+  + +L+       +  N I  WG RPSA  + A A+  
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQ--KLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAA  58

Query  65   QLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDTTCPSRLEKLLLEKPLQDQEQIK  124
              P I LEDGF+RSL+LGV+G PP+SLV DD GIYYD++ PS LEKL+ +K+  +   I 
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALIS  117

Query  125  LAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLVIDQTFGDMAVKYGQASEVDFNKML  184
             A  A+  I+T ++SKYN A  F    S + +IVLV+DQTF DM+V YG+A+  +F  ML
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAML  177

Query  185  ETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYTDRVRIITEDVNPASLIKLCEKVYC  244
            E+A++ENP+A+IWVK HPDVL GKK GY++DL   T+RVR+I+E+V+P SL++   +VY 
Sbjct  178  EAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYV  236

Query  245  VTSQMGFEALLLGKKVVTFGVPWFAGWGVTDDRNEAVQLLVQQNRRKDRSLLQLFYAAYF  304
            VTSQ GFEALL GK V  FG PW+A+WG+TDDR+    LL    RR   +L +LF AAY+
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYL  294

Query  305  DYSRYINPNTGEKGSIFDVIDYLYKAKRLNQRLSGNLYCIGMSLWKQAVIKPFFNLPQCR  364
             Y RYI+P+TGE + +F V++ L   +R  Q+ +G L   G++LWK A++KPF+  P  R
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  365  LHFVRSLNSLKKRPLADNAKILVWS-NGKADVLQFAQQNNIPLLRMEDGFIRSVGLGANL  423
            L F         R  +  +  +VW+ +G  +    AQ++++PL RMEDGF+RS GLG++L
Sbjct  355  LSF--------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  424  VAPLSLVVDDLGIYFNAENTSRLEQILLSAEHFSETDLSYAETLRQKLVASHIGKYNVGG  483
            ++PLSLV+D  GIY++A   S LE +LL+  +++ ++   AE LRQ+LV S ++KYN+G+
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLE-VLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  484  G-DVKFNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDV  542
            +  +  +A++KK+ILVPGQVEDDASIK+G+  IK NL+LL+ VRE NP AYI+YKPHPDV
Sbjct  466  DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDV  525

Query  543  VSGNRVGQIPTAETRRFADQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGL  602
            + GNR G+IP+  T  +AD    +A+I++CI  ADEVHTMTSL+GFEALL+GK VHCYGL
Sbjct  526  LVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGL  585

Query  603  PFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQ-Q  661
            PFYAGWGLT D  + +RR + LTL++LI  +LI YP Y++P   Q I  ++A + L Q  
Sbjct  586  PFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTP  645

Query  662  KRNLTNQRIKRSWVSKQYGKL  682
            ++ +   R K ++V + Y KL
Sbjct  646  RKPMFITRKKAGRVIRYYRKL  666

39) phyA in NC_021082


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  483 bits (1820),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 332/681 (49%), Positives = 471/681 (70%), Gaps = 22/681 (3%)

Query  6    VFFSKIIKIPNLKGFLPH-CEIRRRPLVGKTFIAQKRPNQIIGWGLRPSAVGSRAYAQKH  64
            ++ + I +IP+L  FL++ C+  + +L+       +  N I  WG RPSA  + A A+  
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQ--KLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAA  58

Query  65   QLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDTTCPSRLEKLLLEKPLQDQEQIK  124
              P I LEDGF+RSL+LGV+G PP+SLV DD GIYYD++ PS LEKL+ +K+  +   I 
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALIS  117

Query  125  LAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLVIDQTFGDMAVKYGQASEVDFNKML  184
             A  A+  I+T ++SKYN A  F    S + +IVLV+DQTF DM+V YG+A+  +F  ML
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAML  177

Query  185  ETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYTDRVRIITEDVNPASLIKLCEKVYC  244
            E+A++ENP+A+IWVK HPDVL GKK GY++DL   T+RVR+I+E+V+P SL++   +VY 
Sbjct  178  EAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYV  236

Query  245  VTSQMGFEALLLGKKVVTFGVPWFAGWGVTDDRNEAVQLLVQQNRRKDRSLLQLFYAAYF  304
            VTSQ GFEALL GK V  FG PW+A+WG+TDDR+    LL    RR   +L +LF AAY+
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYL  294

Query  305  DYSRYINPNTGEKGSIFDVIDYLYKAKRLNQRLSGNLYCIGMSLWKQAVIKPFFNLPQCR  364
             Y RYI+P+TGE + +F V++ L   +R  Q+ +G L   G++LWK A++KPF+  P  R
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  365  LHFVRSLNSLKKRPLADNAKILVWS-NGKADVLQFAQQNNIPLLRMEDGFIRSVGLGANL  423
            L F         R  +  +  +VW+ +G  +    AQ++++PL RMEDGF+RS GLG++L
Sbjct  355  LSF--------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  424  VAPLSLVVDDLGIYFNAENTSRLEQILLSAEHFSETDLSYAETLRQKLVASHIGKYNVGG  483
            ++PLSLV+D  GIY++A   S LE +LL+  +++ ++   AE LRQ+LV S ++KYN+G+
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLE-VLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  484  G-DVKFNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDV  542
            +  +  +A++KK+ILVPGQVEDDASIK+G+  IK NL+LL+ VRE NP AYI+YKPHPDV
Sbjct  466  DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDV  525

Query  543  VSGNRVGQIPTAETRRFADQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGL  602
            + GNR G+IP+  T  +AD    +A+I++CI  ADEVHTMTSL+GFEALL+GK VHCYGL
Sbjct  526  LVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGL  585

Query  603  PFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQ-Q  661
            PFYAGWGLT D  + +RR + LTL++LI  +LI YP Y++P   Q I  ++A + L Q  
Sbjct  586  PFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTP  645

Query  662  KRNLTNQRIKRSWVSKQYGKL  682
            ++ +   R K ++V + Y KL
Sbjct  646  RKPMFITRKKAGRVIRYYRKL  666

40) D650_740 in NC_020833


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  483 bits (1820),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 332/681 (49%), Positives = 471/681 (70%), Gaps = 22/681 (3%)

Query  6    VFFSKIIKIPNLKGFLPH-CEIRRRPLVGKTFIAQKRPNQIIGWGLRPSAVGSRAYAQKH  64
            ++ + I +IP+L  FL++ C+  + +L+       +  N I  WG RPSA  + A A+  
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQ--KLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAA  58

Query  65   QLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDTTCPSRLEKLLLEKPLQDQEQIK  124
              P I LEDGF+RSL+LGV+G PP+SLV DD GIYYD++ PS LEKL+ +K+  +   I 
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALIS  117

Query  125  LAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLVIDQTFGDMAVKYGQASEVDFNKML  184
             A  A+  I+T ++SKYN A  F    S + +IVLV+DQTF DM+V YG+A+  +F  ML
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAML  177

Query  185  ETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYTDRVRIITEDVNPASLIKLCEKVYC  244
            E+A++ENP+A+IWVK HPDVL GKK GY++DL   T+RVR+I+E+V+P SL++   +VY 
Sbjct  178  EAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYV  236

Query  245  VTSQMGFEALLLGKKVVTFGVPWFAGWGVTDDRNEAVQLLVQQNRRKDRSLLQLFYAAYF  304
            VTSQ GFEALL GK V  FG PW+A+WG+TDDR+    LL    RR   +L +LF AAY+
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYL  294

Query  305  DYSRYINPNTGEKGSIFDVIDYLYKAKRLNQRLSGNLYCIGMSLWKQAVIKPFFNLPQCR  364
             Y RYI+P+TGE + +F V++ L   +R  Q+ +G L   G++LWK A++KPF+  P  R
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  365  LHFVRSLNSLKKRPLADNAKILVWS-NGKADVLQFAQQNNIPLLRMEDGFIRSVGLGANL  423
            L F         R  +  +  +VW+ +G  +    AQ++++PL RMEDGF+RS GLG++L
Sbjct  355  LSF--------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  424  VAPLSLVVDDLGIYFNAENTSRLEQILLSAEHFSETDLSYAETLRQKLVASHIGKYNVGG  483
            ++PLSLV+D  GIY++A   S LE +LL+  +++ ++   AE LRQ+LV S ++KYN+G+
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLE-VLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  484  G-DVKFNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDV  542
            +  +  +A++KK+ILVPGQVEDDASIK+G+  IK NL+LL+ VRE NP AYI+YKPHPDV
Sbjct  466  DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDV  525

Query  543  VSGNRVGQIPTAETRRFADQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGL  602
            + GNR G+IP+  T  +AD    +A+I++CI  ADEVHTMTSL+GFEALL+GK VHCYGL
Sbjct  526  LVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGL  585

Query  603  PFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQ-Q  661
            PFYAGWGLT D  + +RR + LTL++LI  +LI YP Y++P   Q I  ++A + L Q  
Sbjct  586  PFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTP  645

Query  662  KRNLTNQRIKRSWVSKQYGKL  682
            ++ +   R K ++V + Y KL
Sbjct  646  RKPMFITRKKAGRVIRYYRKL  666

41) N220_13920 in NC_021883


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  483 bits (1820),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 332/681 (49%), Positives = 471/681 (70%), Gaps = 22/681 (3%)

Query  6    VFFSKIIKIPNLKGFLPH-CEIRRRPLVGKTFIAQKRPNQIIGWGLRPSAVGSRAYAQKH  64
            ++ + I +IP+L  FL++ C+  + +L+       +  N I  WG RPSA  + A A+  
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQ--KLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAA  58

Query  65   QLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDTTCPSRLEKLLLEKPLQDQEQIK  124
              P I LEDGF+RSL+LGV+G PP+SLV DD GIYYD++ PS LEKL+ +K+  +   I 
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALIS  117

Query  125  LAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLVIDQTFGDMAVKYGQASEVDFNKML  184
             A  A+  I+T ++SKYN A  F    S + +IVLV+DQTF DM+V YG+A+  +F  ML
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAML  177

Query  185  ETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYTDRVRIITEDVNPASLIKLCEKVYC  244
            E+A++ENP+A+IWVK HPDVL GKK GY++DL   T+RVR+I+E+V+P SL++   +VY 
Sbjct  178  EAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYV  236

Query  245  VTSQMGFEALLLGKKVVTFGVPWFAGWGVTDDRNEAVQLLVQQNRRKDRSLLQLFYAAYF  304
            VTSQ GFEALL GK V  FG PW+A+WG+TDDR+    LL    RR   +L +LF AAY+
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYL  294

Query  305  DYSRYINPNTGEKGSIFDVIDYLYKAKRLNQRLSGNLYCIGMSLWKQAVIKPFFNLPQCR  364
             Y RYI+P+TGE + +F V++ L   +R  Q+ +G L   G++LWK A++KPF+  P  R
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  365  LHFVRSLNSLKKRPLADNAKILVWS-NGKADVLQFAQQNNIPLLRMEDGFIRSVGLGANL  423
            L F         R  +  +  +VW+ +G  +    AQ++++PL RMEDGF+RS GLG++L
Sbjct  355  LSF--------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  424  VAPLSLVVDDLGIYFNAENTSRLEQILLSAEHFSETDLSYAETLRQKLVASHIGKYNVGG  483
            ++PLSLV+D  GIY++A   S LE +LL+  +++ ++   AE LRQ+LV S ++KYN+G+
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLE-VLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  484  G-DVKFNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDV  542
            +  +  +A++KK+ILVPGQVEDDASIK+G+  IK NL+LL+ VRE NP AYI+YKPHPDV
Sbjct  466  DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDV  525

Query  543  VSGNRVGQIPTAETRRFADQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGL  602
            + GNR G+IP+  T  +AD    +A+I++CI  ADEVHTMTSL+GFEALL+GK VHCYGL
Sbjct  526  LVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGL  585

Query  603  PFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQ-Q  661
            PFYAGWGLT D  + +RR + LTL++LI  +LI YP Y++P   Q I  ++A + L Q  
Sbjct  586  PFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTP  645

Query  662  KRNLTNQRIKRSWVSKQYGKL  682
            ++ +   R K ++V + Y KL
Sbjct  646  RKPMFITRKKAGRVIRYYRKL  666

42) J450_06985 in NC_021738


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  482 bits (1816),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 330/681 (49%), Positives = 468/681 (69%), Gaps = 22/681 (3%)

Query  6    IFSNGICRIPNLEHFLPD-CRIIRIPSWRKKLGNKAKVDQIIGWGLRPSAVGARAYAQKH  64
            I+S GI RIP+LE FL++ C+ + +            V+ I  WG RPSA  + A A+  
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLR-----PVPQEVNAIAVWGHRPSAAKPVAIAKAA  58

Query  65   QLPYIALEDGFLRSLGLGVKGYPPFSLVYDDVGIYYDTTCPSRLEKFLLEQPLQDQEQIK  124
              P I LEDGF+RSL+LGV+G PP+SLV DD GIYYD++ PS LEK L+++   +   I 
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEK-LVQDKAGNTALIS  117

Query  125  LAEKALSQILTYQLSKYNHALDFSEIPSIKEKIVLVIDQTFGDMAVKYGQASEVDFNKML  184
             A  A+  I+T ++SKYN A  F    S + +IVLV+DQTF DM+V YG+A+  +F  ML
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAML  177

Query  185  ETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYADRVRIITEDVNPASLIKWCEKVYC  244
            E+A++ENP+A+IWVK HPDVL GKK GY++DL   ++RVR+I+E+V+P SL++   +VY 
Sbjct  178  EAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYV  236

Query  245  VTSQMGFEALLLGKKVVTFGVSWFAGWGVTDDRHNSVQLLIQQKRRQARSLLQLFYAAYF  304
            VTSQ GFEALL GK V  FG +W+A+WG+TDDRH    LL    RR + +L +LF AAY+
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYL  294

Query  305  DYSRYINPNTGEKGSIFDVIEYLHKATILNRRLSGNVYCIGMSLWKQAVIKPFFNLPQCR  364
             Y RYI+P+TGE + +F V++ L+      ++ +G +   G++LWK A++KPF+  P  R
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  365  LHFVRSLNSLKKRPLAENAKILVWS-NGKPEIIQFAKENHIPLLRMEDGFIRSVGLGANL  423
            L F         R  +  +  +VW+ +G  +    A+ + +PL RMEDGF+RS GLG++L
Sbjct  355  LSF--------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  424  VAPLSLVVDDLGIYFNAENPSRLEQILLEAEDFSENDLSYAEALRQKLVATHIGKYNVGS  483
            ++PLSLV+D  GIY++A  PS LE +LL+  +++  +   AE LRQ+LV + ++KYN+G+
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLE-VLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  484  G-EVQVNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDV  542
            +  +  +A++KK+ILVPGQVEDDASIK+G+  IK NL+LL+ VRE NP AYI+YKPHPDV
Sbjct  466  DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDV  525

Query  543  VSGNRVGQIPTAETRRFADQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGL  602
            + GNR G+IP+  T  +AD    +A+I++CI  ADEVHTMTSL+GFEALL+GK VHCYGL
Sbjct  526  LVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGL  585

Query  603  PFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQ-Q  661
            PFYAGWGLT D  + +RR + LTL++LI  +LI YP Y++P   Q I  ++A + L Q  
Sbjct  586  PFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTP  645

Query  662  KRNLTNQRIKRSWVSKQYGKL  682
            ++ +   R K ++V + Y KL
Sbjct  646  RKPMFITRKKAGRVIRYYRKL  666

43) NMBB_0086 in NC_017505


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 336/690 (49%), Positives = 474/690 (69%), Gaps = 33/690 (4%)

Query  1    MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVF-----NAQTIIGWGLRPTTHQARAFAQ  55
            MI  Y P    GI++IP++ +FL++   + +++     + ++I  WG RP++ ++ A+A+
Sbjct  1    MIGIYSP----GIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAK  56

Query  56   SHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLEQLILAANMPSEML  115
            + G P + LEDGF+RSL+LGV G PP++LV DD GIYYD+++PS LE+L+      + ++
Sbjct  57   AAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALI  116

Query  116  NQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGDMAIQYGGADEATFRQ  175
            +QA++A++ I+T  +SKYN A  F  +   +  NIVLV+DQTF DM++ YG A+   F  
Sbjct  117  SQAREAMHTIVTGDMSKYNLAPAFVAD-ESERTNIVLVVDQTFNDMSVTYGNAGPHEFAA  175

Query  176  MFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLLAEDINPISLLQAVDKVY  235
            M+++A+AENP+AEIWVK HPDVL GKK GY++DL    RVRL+AE+++P SLL+ V +VY
Sbjct  176  MLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVY  235

Query  236  CVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPKIDSLVQTQRRAPRNllqlfaaay  295
             VTSQ GFEALL GKP+  FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAY
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAY  293

Query  296  lqySRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSC  355
            L+Y RY++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ 
Sbjct  294  LRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTN  353

Query  356  RLKFISSTQKLAGVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSN  414
            RL F            +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+
Sbjct  354  RLSFSRRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSD  405

Query  415  LVPPLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGS  474
            L+PPLSLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+
Sbjct  406  LLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  475  SDFTAPST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPD  532
             DF+ P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPD
Sbjct  466  -DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPD  524

Query  533  VVSGNRIGHISPEDAARYADQTAEQTDILTCLQYADEVHTMTSLTGFEALLRGKKVSCYG  592
            V+ GNR G+I++E +A  AD  A ++DI+ C+Q ADEVHTMTSL+GFEALL+GK V CYG
Sbjct  525  VLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYG  584

Query  593  LPFYAGWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQ  652
            LPFYAGWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+ 
Sbjct  585  LPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQT  644

Query  653  KNMQKNNNGLHRGYFA-KKLGKIKQLYRSF  681
                         +++ KK G++ + YR +
Sbjct  645  PRKPM--------FITRKKAGRVIRYYRKL  666

44) NMBNZ0533_0087 in NC_017518


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 336/690 (49%), Positives = 474/690 (69%), Gaps = 33/690 (4%)

Query  1    MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVF-----NAQTIIGWGLRPTTHQARAFAQ  55
            MI  Y P    GI++IP++ +FL++   + +++     + ++I  WG RP++ ++ A+A+
Sbjct  1    MIGIYSP----GIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAK  56

Query  56   SHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLEQLILAANMPSEML  115
            + G P + LEDGF+RSL+LGV G PP++LV DD GIYYD+++PS LE+L+      + ++
Sbjct  57   AAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALI  116

Query  116  NQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGDMAIQYGGADEATFRQ  175
            +QA++A++ I+T  +SKYN A  F  +   +  NIVLV+DQTF DM++ YG A+   F  
Sbjct  117  SQAREAMHTIVTGDMSKYNLAPAFVAD-ESERTNIVLVVDQTFNDMSVTYGNAGPHEFAA  175

Query  176  MFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLLAEDINPISLLQAVDKVY  235
            M+++A+AENP+AEIWVK HPDVL GKK GY++DL    RVRL+AE+++P SLL+ V +VY
Sbjct  176  MLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVY  235

Query  236  CVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPKIDSLVQTQRRAPRNllqlfaaay  295
             VTSQ GFEALL GKP+  FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAY
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAY  293

Query  296  lqySRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSC  355
            L+Y RY++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ 
Sbjct  294  LRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTN  353

Query  356  RLKFISSTQKLAGVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSN  414
            RL F            +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+
Sbjct  354  RLSFSRRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSD  405

Query  415  LVPPLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGS  474
            L+PPLSLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+
Sbjct  406  LLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  475  SDFTAPST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPD  532
             DF+ P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPD
Sbjct  466  -DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPD  524

Query  533  VVSGNRIGHISPEDAARYADQTAEQTDILTCLQYADEVHTMTSLTGFEALLRGKKVSCYG  592
            V+ GNR G+I++E +A  AD  A ++DI+ C+Q ADEVHTMTSL+GFEALL+GK V CYG
Sbjct  525  VLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYG  584

Query  593  LPFYAGWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQ  652
            LPFYAGWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+ 
Sbjct  585  LPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQT  644

Query  653  KNMQKNNNGLHRGYFA-KKLGKIKQLYRSF  681
                         +++ KK G++ + YR +
Sbjct  645  PRKPM--------FITRKKAGRVIRYYRKL  666

45) J451_07850 in NC_021739


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  479 bits (1806),  Expect = 3e-136, Method: Compositional matrix adjust.
 Identities = 329/681 (49%), Positives = 470/681 (70%), Gaps = 22/681 (3%)

Query  6    VFFSKIIKIPNLKGFLPH-CEIRRRPLVGKTFIAQKRPNQIIGWGLRPSAVGARAYAQKH  64
            ++ + I +IP+L  FL++ C+  + +L+       +  N I  WG RPSA  + A A+  
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQ--KLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAA  58

Query  65   QLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDTTCPSRLEKLLLEKPLQDQEQIK  124
              P I LEDGF+RSL+LGV+G PP+SLV DD GIYYD++ PS LEKL+ +K+  +   I 
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALIS  117

Query  125  LAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLVIDQTFGDMAVKYGQASEVDFNKML  184
             A  A+  I+T ++SKYN A  F    S + +IVLV+DQTF DM+V YG+A+  +F  ML
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAML  177

Query  185  ETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYTDRVRIITEDVNPASLIKLCEKVYC  244
            E+A++ENP+A+IWVK HPDVL GKK GY++DL   T+RVR+I+E+V+P SL++   +VY 
Sbjct  178  EAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYV  236

Query  245  VTSQMGFEALLLGKKVVTFGVPWFAGWGVTDDRNEAVQLLVQQNRRKDRSLLQLFYAAYF  304
            VTSQ GFEALL GK V  FG PW+A+WG+TDDR+    LL    RR   +L +LF AAY+
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYL  294

Query  305  DYSRYINPNTGEKGSIFDVIEYLHKATILNRRLSGNVYCIGMSLWKQAVIKPFFNLPQCR  364
             Y RYI+P+TGE + +F V++ L+      ++ +G +   G++LWK A++KPF+  P  R
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  365  LHFVRSLNSLKKRPLADNAKILVWS-NGKADVLQFAQQNNIPLLRMEDGFIRSVGLGANL  423
            L F         R  +  +  +VW+ +G  +    AQ++++PL RMEDGF+RS GLG++L
Sbjct  355  LSF--------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  424  VAPLSLVVDDLGIYFNAENTSRLEQILLSAEHFSETDLSYAETLRQKLVASHIGKYNVGG  483
            ++PLSLV+D  GIY++A   S LE +LL+  +++ ++   AE LRQ+LV S ++KYN+G+
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLE-VLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA  465

Query  484  G-DVKFNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDV  542
            +  +  +A++KK+ILVPGQVEDDASIK+G+  IK NL+LL+ VRE NP AYI+YKPHPDV
Sbjct  466  DFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDV  525

Query  543  VSGNRVGQIPTAETRRFADQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGL  602
            + GNR G+IP+  T  +AD    +A+I++CI  ADEVHTMTSL+GFEALL+GK VHCYGL
Sbjct  526  LVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGL  585

Query  603  PFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQ-Q  661
            PFYAGWGLT D  + +RR + LTL++LI  +LI YP Y++P   Q I  ++A + L Q  
Sbjct  586  PFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTP  645

Query  662  KRNLTNQRIKRSWVSKQYGKL  682
            ++ +   R K ++V + Y KL
Sbjct  646  RKPMFITRKKAGRVIRYYRKL  666

46) NMBH4476_0082 in NC_017516


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  471 bits (1775),  Expect = 7e-134, Method: Compositional matrix adjust.
 Identities = 328/656 (50%), Positives = 458/656 (70%), Gaps = 28/656 (4%)

Query  28   SRGIRKIPHLSTLLPEFHICKD-------GKEAEAVVGWGLRPTTHKARAFAAEHQLPFI  80
            S GI++IPHL  +L+  + C+         +E +A+  WG RP++ K+ A+A     P I
Sbjct  6    SPGIWRIPHLEKFLA--QPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  81   ALEDGFLRSLGLGVAGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQA  140
             LEDGF+RSL+LGV G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QA++A
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREA  122

Query  141  MDFILQHHLSKYNHAPELSDDHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQ  200
            M+ I+  ++SKYN AP +  D++     + + VL++DQTF DM++ YG A++  F  M++
Sbjct  123  MHTIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  201  TALNENPQADIWVKTHPDVLCGKKQGYLTQLAQQHRVHLLAEDINPISLLQNVDKVYCVT  260
            +A+ ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VT
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  261  SQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPEINRLVQTQRRATRNllqlfaaaylqy  320
            SQ GFEALL GKP+T FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAYL+Y
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRY  296

Query  321  SRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLK  380
             RY++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL 
Sbjct  297  CRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLS  356

Query  381  FISSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVP  439
            F            +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+P
Sbjct  357  FSRRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  440  PLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDF  499
            PLSLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DF  467

Query  500  TAPST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVS  557
            + P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  558  GNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPF  617
            GNR G+I++E +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  618  YAGWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIR  673
            YAGWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643


 Score =  115 bits (420),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 103/334 (31%), Positives = 189/334 (57%), Gaps = 24/334 (7%)

Query  361  SLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAI--VRFAEQHHI  418
            ++W+ +    F+  P  +L ++ +  +       +   I  WG+   A   V +A     
Sbjct  8    GIWRIPHLEKFLAQPCQKLSLLRPVPQ-------EVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  419  PLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTAL  478
            P++R+EDGF+RS++LG N  PPLSLV DD +IY++A  PS LE ++Q++  +   +  A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  479  KLQKMLTENHISKYNVGSSDFTAPSTDKT-VILVPGQVEDDASIRYG--SPQIYRNLDLL  535
                 +   ++SKYN++++ F A  +++T ++LV +Q  +D S+ YG  +P+ +  +   
Sbjct  121  EAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  536  RTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTM  595
                + +++  +  K HPDV+ G++ G ++   A++     AE+    + L+    +  +
Sbjct  180  AMAENPQAEIWV--KVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVV  237

Query  596  TSLTGFEALLRGKKVSCYGLPFYAGWGLTQD------LLPIPRRSRRLELWQLIAGTLIH  649
            TS  GFEALL GK V+C+G P YA+WGLT+D      LL+  R S  LE  +L+A++ ++
Sbjct  238  TSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLE--ELFAAAYLR  295

Query  650  YPDYIHPETHQAINAETAAQIL-IRQKNMQKNNN  682
            Y  YI+P+T +  +  T  Q L ++++++Q+ N 
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNG  329

47) lipA in NC_003112


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  471 bits (1775),  Expect = 7e-134, Method: Compositional matrix adjust.
 Identities = 328/656 (50%), Positives = 458/656 (70%), Gaps = 28/656 (4%)

Query  28   SRGIRKIPHLSTLLPEFHICKD-------GKEAEAVVGWGLRPTTHKARAFAAEHQLPFI  80
            S GI++IPHL  +L+  + C+         +E +A+  WG RP++ K+ A+A     P I
Sbjct  6    SPGIWRIPHLEKFLA--QPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  81   ALEDGFLRSLGLGVAGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQA  140
             LEDGF+RSL+LGV G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QA++A
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREA  122

Query  141  MDFILQHHLSKYNHAPELSDDHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQ  200
            M+ I+  ++SKYN AP +  D++     + + VL++DQTF DM++ YG A++  F  M++
Sbjct  123  MHTIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  201  TALNENPQADIWVKTHPDVLCGKKQGYLTQLAQQHRVHLLAEDINPISLLQNVDKVYCVT  260
            +A+ ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VT
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  261  SQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPEINRLVQTQRRATRNllqlfaaaylqy  320
            SQ GFEALL GKP+T FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAYL+Y
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRY  296

Query  321  SRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLK  380
             RY++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL 
Sbjct  297  CRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLS  356

Query  381  FISSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVP  439
            F            +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+P
Sbjct  357  FSRRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  440  PLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDF  499
            PLSLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DF  467

Query  500  TAPST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVS  557
            + P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  558  GNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPF  617
            GNR G+I++E +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  618  YAGWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIR  673
            YAGWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643


 Score =  115 bits (420),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 103/334 (31%), Positives = 189/334 (57%), Gaps = 24/334 (7%)

Query  361  SLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAI--VRFAEQHHI  418
            ++W+ +    F+  P  +L ++ +  +       +   I  WG+   A   V +A     
Sbjct  8    GIWRIPHLEKFLAQPCQKLSLLRPVPQ-------EVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  419  PLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTAL  478
            P++R+EDGF+RS++LG N  PPLSLV DD +IY++A  PS LE ++Q++  +   +  A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  479  KLQKMLTENHISKYNVGSSDFTAPSTDKT-VILVPGQVEDDASIRYG--SPQIYRNLDLL  535
                 +   ++SKYN++++ F A  +++T ++LV +Q  +D S+ YG  +P+ +  +   
Sbjct  121  EAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  536  RTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTM  595
                + +++  +  K HPDV+ G++ G ++   A++     AE+    + L+    +  +
Sbjct  180  AMAENPQAEIWV--KVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVV  237

Query  596  TSLTGFEALLRGKKVSCYGLPFYAGWGLTQD------LLPIPRRSRRLELWQLIAGTLIH  649
            TS  GFEALL GK V+C+G P YA+WGLT+D      LL+  R S  LE  +L+A++ ++
Sbjct  238  TSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLE--ELFAAAYLR  295

Query  650  YPDYIHPETHQAINAETAAQIL-IRQKNMQKNNN  682
            Y  YI+P+T +  +  T  Q L ++++++Q+ N 
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNG  329

48) lipA in NC_010120


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  471 bits (1776),  Expect = 7e-134, Method: Compositional matrix adjust.
 Identities = 332/685 (49%), Positives = 473/685 (70%), Gaps = 33/685 (4%)

Query  28   SRGIRKIPHLSTLLPE----FHIYKD-GKGAEAVVGWGLRPTTHKARAFATEHQLPFIAL  82
            S GI++IPHL  +L++    + + +   +  +A+  WG RP++ K+ A+A     P I L
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRL  65

Query  83   EDGFLRSLGLGVSGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQARQAMD  142
            EDGF+RSL+LGV+G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QAR+AM+
Sbjct  66   EDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREAMH  124

Query  143  FILQHHLSKYNHAPELSDDHPLRSPSKSETVLIIDQTFGDMAIQYGGADASTFELMFQTA  202
             I+  ++SKYN AP +  D++     +++ VL++DQTF DM++ YG A++  F  M+++A
Sbjct  125  TIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  203  LNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVHLLAEDINPISLLQNVDKVYCVTSQ  262
            + ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  263  MGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIGSLIQTQRRAPRNllqlfaaaylqySR  322
             GFEALL GKP+T FG PWYA+WG++DDRHP+ + L  + RR++  L +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  323  YLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFI  382
            Y++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS  358

Query  383  SSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVPPL  441
                       +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+PPL
Sbjct  359  RRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  442  SLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDFTA  501
            SLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF+ 
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DFSL  469

Query  502  PST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGN  559
            P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  560  RIGHISPEDAARYADQTAEQTDILTCLQYADEVHTMTSLTGFEALLRGKKVSCYGLPFYA  619
            R G+I++E +A  AD  A ++DI+ C+Q ADEVHTMTSL+GFEALL+GK V CYGLPFYA
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  620  GWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQK  679
            GWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+      
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPM  649

Query  680  NNNGLHRGYFA-KKLGKIKQLYRSF  703
                    +++ KK G++ + YR +
Sbjct  650  --------FITRKKAGRVIRYYRKL  666

49) NMA0186 in NC_003116


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  471 bits (1774),  Expect = 9e-134, Method: Compositional matrix adjust.
 Identities = 325/654 (50%), Positives = 461/654 (71%), Gaps = 24/654 (3%)

Query  28   SRGIRKIPHLSTLLPE----FHIYKD-GKGAEAVVGWGLRPTTHKARAFATEHQLPFIAL  82
            S GI++IPHL  +L++    + + +   +  +A+  WG RP++ K+ A+A     P I L
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRL  65

Query  83   EDGFLRSLGLGVSGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQARQAMD  142
            EDGF+RSL+LGV+G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QAR+AM+
Sbjct  66   EDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREAMH  124

Query  143  FILQHHLSKYNHAPELSDDHPLRSPSKSETVLIIDQTFGDMAIQYGGADASTFELMFQTA  202
             I+  ++SKYN AP +  D++     +++ VL++DQTF DM++ YG A++  F  M+++A
Sbjct  125  TIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  203  LNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVHLLAEDINPISLLQNVDKVYCVTSQ  262
            + ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  263  MGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIGSLIQTQRRAPRNllqlfaaaylqySR  322
             GFEALL GKP+T FG PWYA+WG++DDRHP+ + L  + RR++  L +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  323  YLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFI  382
            Y++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS  358

Query  383  SSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVPPL  441
                       +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+PPL
Sbjct  359  RRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  442  SLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDFTA  501
            SLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF+ 
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DFSL  469

Query  502  PST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGN  559
            P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  560  RIGHISPDDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYA  619
            R G+I+++ +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPFYA
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  620  GWGLTQDLLPIPRRSRRLELWQLVAGTLIYYPDYIHPKTHQAINAETAAQILIR  673
            GWGLT D    PRR R+L L +L+  +LI YP YIHP   Q+I  E AA+ LI+
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643

50) lipA in NC_017512


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  470 bits (1773),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 325/654 (50%), Positives = 461/654 (71%), Gaps = 24/654 (3%)

Query  28   SRGIRKIPHLSTLLPE----FHIYKD-GKGAEAVVGWGLRPTTHKARAFATEHQLPFIAL  82
            S GI++IPHL  +L++    + + +   +  +A+  WG RP++ K+ A+A     P I L
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRL  65

Query  83   EDGFLRSLGLGVSGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTIPSETLAQARQAMD  142
            EDGF+RSL+LGV+G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QAR+AM+
Sbjct  66   EDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREAMH  124

Query  143  FILQHHLSKYNHAPELSDDHPLRSPSKSETVLIIDQTFGDMAIQYGGADASTFELMFQTA  202
             I+  ++SKYN AP +  D++     +++ VL++DQTF DM++ YG A++  F  M+++A
Sbjct  125  TIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  203  LNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVHLLAEDINPISLLQNVDKVYCVTSQ  262
            + ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  263  MGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIGSLIQTQRRAPRNllqlfaaaylqySR  322
             GFEALL GKP+T FG PWYA+WG++DDRHP+ + L  + RR++  L +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  323  YLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFI  382
            Y++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS  358

Query  383  SSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVPPL  441
                       +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+PPL
Sbjct  359  RRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  442  SLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDFTA  501
            SLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF+ 
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DFSL  469

Query  502  PST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGN  559
            P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  560  RIGHISPDDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYA  619
            R G+I+++ +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPFYA
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  620  GWGLTQDLLPIPRRSRRLELWQLVAGTLIYYPDYIHPKTHQAINAETAAQILIR  673
            GWGLT D    PRR R+L L +L+  +LI YP YIHP   Q+I  E AA+ LI+
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643

51) lipA in NC_017501


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  470 bits (1770),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 331/685 (49%), Positives = 473/685 (70%), Gaps = 33/685 (4%)

Query  28   SRGIRKIPHLSTLLPE----FHIYKD-GKGAEAVVGWGLRPTTHKARAFATEHQLPFIAL  82
            S GI++IPHL  +L++    + + +   +  +A+  WG RP++ K+ A+A     P I L
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRL  65

Query  83   EDGFLRSLGLGVSGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQARQAMD  142
            EDGF+RSL+LGV+G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QAR+AM+
Sbjct  66   EDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREAMH  124

Query  143  FILQHHLSKYNHAPELSDDHPLRSPSKSETVLIIDQTFGDMAIQYGGADASTFELMFQTA  202
             I+  ++SKYN AP +  D++     +++ VL++DQTF DM++ YG A++  F  M+++A
Sbjct  125  TIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  203  LNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVHLLAEDINPISLLQNVDKVYCVTSQ  262
            + ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  263  MGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIGSLIQTQRRAPRNllqlfaaaylqySR  322
             GFEALL GKP+T FG PWYA+WG++DDRHP+ + L  + RR++  L +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  323  YLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCHLKFI  382
            Y++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ +L F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS  358

Query  383  SSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVPPL  441
                       +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+PPL
Sbjct  359  RRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  442  SLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDFTA  501
            SLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF+ 
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DFSL  469

Query  502  PST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGN  559
            P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  560  RIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYA  619
            R G+I++E +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPFYA
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  620  GWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQK  679
            GWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+      
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPM  649

Query  680  NNNGLHRGYFA-KKLGKIKQLYRSF  703
                    +++ KK G++ + YR +
Sbjct  650  --------FITRKKAGRVIRYYRKL  666

52) NMBM01240355_0084 in NC_017517


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  469 bits (1769),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 325/654 (50%), Positives = 459/654 (71%), Gaps = 24/654 (3%)

Query  28   SRGIRKIPHLSTLLPE----FHIYKD-GKGAEAVVGWGLRPTTHKARAFATEHQLPFIAL  82
            S GI++IPHL  +L++    + + +   +  +A+  WG RP++ K+ A+A     P I L
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRL  65

Query  83   EDGFLRSLGLGVSGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQTMD  142
            EDGF+RSL+LGV+G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QA+++M+
Sbjct  66   EDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREAMH  124

Query  143  FILQHHLSKYNHAPELSDDHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQTA  202
             I+  ++SKYN AP +  D++     + + VL++DQTF DM++ YG A++  F  M+++A
Sbjct  125  TIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  203  LNENPQADIWVKTHPDVLCGKKQGYLTQLAQQHRVHLLAEDINPISLLQNVDKVYCVTSQ  262
            + ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  263  MGFEALLCGKPLTTFGLPWYAGWGVSDDRHPEINRLVQTQRRATRNllqlfaaaylqySR  322
             GFEALL GKP+T FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  323  YLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFI  382
            Y++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS  358

Query  383  SSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVPPL  441
                       +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+PPL
Sbjct  359  RRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  442  SLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDFTA  501
            SLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF+ 
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DFSL  469

Query  502  PST--DKTVILVPGQVEDDASIRYGSPKIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGN  559
            P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  560  RIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYA  619
            R G+I++E +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPFYA
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  620  GWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIR  673
            GWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643


 Score =  115 bits (418),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 107/332 (33%), Positives = 189/332 (57%), Gaps = 20/332 (6%)

Query  361  SLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAI--VRFAEQHHI  418
            ++W+ +    F+  P  +L ++ +  +       +   I  WG+   A   V +A     
Sbjct  8    GIWRIPHLEKFLAQPCQKLSLLRPVPQ-------EVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  419  PLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTAL  478
            P++R+EDGF+RS++LG N  PPLSLV DD +IY++A  PS LE ++Q++  +   +  A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  479  KLQKMLTENHISKYNVGSSDFTAPSTDKT-VILVPGQVEDDASIRYGSPKIYRNLDLLRT  537
                 +   ++SKYN++++ F A  +++T ++LV +Q  +D S+ YG++       +L +
Sbjct  121  EAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  538  VRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTS  597
                NP+A I  K HPDV+ G++ G ++   A++     AE+    + L+    +  +TS
Sbjct  180  AMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTS  239

Query  598  LTGFEALLRGKKVSCYGLPFYAGWGLTQD------LLPIPRRSRRLELWQLIAGTLIHYP  651
              GFEALL GK V+C+G P YA+WGLT+D      LL+  R S  LE  +L+A++ ++Y 
Sbjct  240  QYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLE--ELFAAAYLRYC  297

Query  652  DYIHPETHQAINAETAAQIL-IRQKNMQKNNN  682
             YI+P+T +  +  T  Q L ++++++Q+ N 
Sbjct  298  RYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNG  329

53) NMBG2136_0083 in NC_017513


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  469 bits (1766),  Expect = 4e-133, Method: Compositional matrix adjust.
 Identities = 325/654 (50%), Positives = 458/654 (71%), Gaps = 24/654 (3%)

Query  28   SRGIRKIPHLSTLLPE----FHIYKD-GKGAEAVIGWGLRPTTHKARAFAAEHQLPFIAL  82
            S GI++IPHL  +L++    + + +   +  +A+  WG RP++ K+ A+A     P I L
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRL  65

Query  83   EDGFLRSLGLGVAGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQTMD  142
            EDGF+RSL+LGV G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QA+++M+
Sbjct  66   EDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREAMH  124

Query  143  FILQHHLSKYNHAPELSDDHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQTA  202
             I+  ++SKYN AP +  D++     + + VL++DQTF DM++ YG A++  F  M+++A
Sbjct  125  TIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  203  LNENPQADIWVKTHPDVLCGKKQGYLTQLAQQHRVHLLAEDINPISLLQNVDKVYCVTSQ  262
            + ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  263  MGFEALLCGKPLTTFGLPWYAGWGVSDDRHPEINRLVQTQRRATRNllqlfaaaylqySR  322
             GFEALL GKP+T FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAYL+Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  323  YLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFI  382
            Y++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS  358

Query  383  SSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVPPL  441
                       +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+PPL
Sbjct  359  RRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  442  SLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDFTA  501
            SLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF+ 
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DFSL  469

Query  502  PST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGN  559
            P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  560  RIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYA  619
            R G+I++E +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPFYA
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  620  GWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIR  673
            GWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643


 Score =  115 bits (420),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 103/334 (31%), Positives = 189/334 (57%), Gaps = 24/334 (7%)

Query  361  SLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAI--VRFAEQHHI  418
            ++W+ +    F+  P  +L ++ +  +       +   I  WG+   A   V +A     
Sbjct  8    GIWRIPHLEKFLAQPCQKLSLLRPVPQ-------EVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  419  PLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTAL  478
            P++R+EDGF+RS++LG N  PPLSLV DD +IY++A  PS LE ++Q++  +   +  A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  479  KLQKMLTENHISKYNVGSSDFTAPSTDKT-VILVPGQVEDDASIRYG--SPQIYRNLDLL  535
                 +   ++SKYN++++ F A  +++T ++LV +Q  +D S+ YG  +P+ +  +   
Sbjct  121  EAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  536  RTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTM  595
                + +++  +  K HPDV+ G++ G ++   A++     AE+    + L+    +  +
Sbjct  180  AMAENPQAEIWV--KVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVV  237

Query  596  TSLTGFEALLRGKKVSCYGLPFYAGWGLTQD------LLPIPRRSRRLELWQLIAGTLIH  649
            TS  GFEALL GK V+C+G P YA+WGLT+D      LL+  R S  LE  +L+A++ ++
Sbjct  238  TSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLE--ELFAAAYLR  295

Query  650  YPDYIHPETHQAINAETAAQIL-IRQKNMQKNNN  682
            Y  YI+P+T +  +  T  Q L ++++++Q+ N 
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNG  329

54) lipA in NC_008767


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  467 bits (1760),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 331/687 (49%), Positives = 469/687 (69%), Gaps = 37/687 (5%)

Query  28   SRGIRKIPHLFTLLPEFHICKD-------GKGAEAVIGWGLRPTTHKARAFAAEHQLPFI  80
            S GI++IPHL  +L+  + C+         +  +A+  WG RP++ K+ A+A     P I
Sbjct  6    SPGIWRIPHLEKFLA--QPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  81   ALEDGFLRSLGLGVAGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQT  140
             LEDGF+RSL+LGV G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QA+++
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREA  122

Query  141  MDFILQHHLSKYNHAPELSDDHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQ  200
            M+ I+  ++SKYN AP +  D++     + + VL++DQTF DM++ YG A++  F  M++
Sbjct  123  MHTIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  201  TALNENPQADIWVKTHPDVLCGKKQGYLTQLAQQHRVHLLAEDINPISLLQNVDKVYCVT  260
            +A+ ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL++V +VY VT
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  261  SQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPEINRLVQTQRRATRNllqlfaaaylqy  320
            SQ GFEALL GKP+T FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAYL+Y
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRY  296

Query  321  SRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLK  380
             RY++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL 
Sbjct  297  CRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLS  356

Query  381  FISSTQKLARVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVP  439
            F            +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+P
Sbjct  357  FSRRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  440  PLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGNSDF  499
            PLSLV D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G +DF
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADF  467

Query  500  SAPST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERHPDAYIIYKPHPDVVS  557
            S P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRER+P+AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  558  GNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPF  617
            GNR G+I++E +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  618  YAGWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNM  677
            YAGWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+    
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRK  647

Query  678  QKNNNGLHRGYFA-KKLGKIKQLYRSF  703
                      +++ KK G++ + YR +
Sbjct  648  PM--------FITRKKAGRVIRYYRKL  666

55) NMBM04240196_0091 in NC_017515


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  467 bits (1761),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 327/656 (50%), Positives = 457/656 (70%), Gaps = 28/656 (4%)

Query  28   SRGIRKIPHLFTLLPEFHICKD-------GKGAEAVIGWGLRPTTHKARAFAAEHQLPFI  80
            S GI++IPHL  +L+  + C+         +  +A+  WG RP++ K+ A+A     P I
Sbjct  6    SPGIWRIPHLEKFLA--QPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  81   ALEDGFLRSLGLGVAGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQA  140
             LEDGF+RSL+LGV G PP S+V DD GIYYD+++PS LE+L+    +  +  ++QA++A
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQAREA  122

Query  141  MDFILQHHLSKYNHAPELSDDHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQ  200
            M+ I+  ++SKYN AP +  D++     + + VL++DQTF DM++ YG A++  F  M++
Sbjct  123  MHTIVTGDMSKYNLAPAFVADES----ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  201  TALNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVHLLAEDINPISLLQNIDKVYCVT  260
            +A+ ENPQA+IWVK HPDVL GKK GY+++L   +RV+L+AE+++P SLL+++ +VY VT
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  261  SQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIDSLVQTQRRAPRNllqlfaaaylqy  320
            SQ GFEALL GKP+T FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAYL+Y
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRY  296

Query  321  SRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLK  380
             RY++P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL 
Sbjct  297  CRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLS  356

Query  381  FISSTQKLAGVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVP  439
            F            +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+P
Sbjct  357  FSRRC--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  440  PLSLVTDDMGIYFNAEAPSRLEHILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDF  499
            PLSLV D  GIY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DF  467

Query  500  TAPST--DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVS  557
            + P+   DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  558  GNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPF  617
            GNR G+I++E +A  AD  A +ADI+ C+Q ADE+HTMTSL+GFEALL+GK V CYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  618  YAGWGLTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIR  673
            YAGWGLT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643


 Score =  118 bits (430),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 104/334 (32%), Positives = 189/334 (57%), Gaps = 24/334 (7%)

Query  361  SLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDDARILAWGNGKEAI--VRFAEQHHI  418
            ++W+ +    F+  P  +L ++ +  +       +   I  WG+   A   V +A     
Sbjct  8    GIWRIPHLEKFLAQPCQKLSLLRPVPQ-------EVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  419  PLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGIYFNAEAPSRLEHILqnqnfddqdfqTAL  478
            P++R+EDGF+RS++LG N  PPLSLV DD GIY++A  PS LE ++Q++  +   +  A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  479  KLQKMLTENHISKYNVGSSDFTAPSTDKT-VILVPGQVEDDASIRYG--SPQIYRNLDLL  535
                 +   ++SKYN++++ F A  +++T ++LV +Q  +D S+ YG  +P+ +  +   
Sbjct  121  EAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  536  RTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQYADEIHTM  595
                + +++  +  K HPDV+ G++ G ++   A++     AE+    + L+    +  +
Sbjct  180  AMAENPQAEIWV--KVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVV  237

Query  596  TSLTGFEALLRGKKVSCYGLPFYAGWGLTQD------LLPIPRRSRRLELWQLIAGTLIH  649
            TS  GFEALL GK V+C+G P YA+WGLT+D      LL+  R S  LE  +L+A++ ++
Sbjct  238  TSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLE--ELFAAAYLR  295

Query  650  YPDYIHPETHQAINAETAAQIL-IRQKNMQKNNN  682
            Y  YI+P+T +  +  T  Q L ++++++Q+ N 
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNG  329

56) hcsA' in NC_016809


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  465 bits (1754),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 312/653 (48%), Positives = 453/653 (70%), Gaps = 26/653 (3%)

Query  6    IFSHGIKKIPHLASFF--PNEELAFARIFSVSKADSVLGWGLRPSTKKSRAYAQKYNLPF  63
            I+S GI +IPHL  F+  P + L++ R  +    +++  WG RPS+ K+ A A+    P 
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVP-QEVNAIAVWGHRPSAAKPVAIAKAAGKPV  62

Query  64   IALEDGFLRSLGLGVDGYPPLSMVVDKLGIYYDTTRPSTLEQLIQAGECDEVLAEKARSQ  123
            I LEDGF+RSL+LGV+G PPLS+VVD  GIYYD+++PS+LE+L+Q    +  L  +AR  
Sbjct  63   IRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREA  122

Query  124  ---IVTHQLSKYN--QTLVDYEKEGDEPLVLVIDQTFGDMAVKYGQADAEHFAQMLQAAI  178
               IVT ++SKYN   ++V  E E  + +VLV+DQTF DM+V YG+A++++FA ML+AA+
Sbjct  123  MHTIVTGDMSKYNLAPAFVADESERTN-IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  179  SENPNAKILVKTHPDVLSGKKQGYFSPNENYPSNVHFFSNPVNPISLIKAVEKVYCVTSQ  238
            +ENP+A I VK HPDVL GKK GYF+        V+++++ V+P SL++ V +VY VTSQ
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  239  MGFEALLMGKPVVTFGVPWFAGWGVTDDRHPNAKALTQSERRKVRSVLQLFYAAYFQYTR  298
             GFEALL GKPV  FG PW+A+WG+TDDRHP++  L  S RR   ++ +LF AAY++Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  299  YLNPNTGKSGTIFDVINHI-IHTKALNLRLQGNLYCVGISLWKRAVIKPFFRLPSCKLHF  357
            Y++P+TG  + +F V++ + ++ + L+ R +G L   G++LWK A++KPF+R P+ +L F
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQR-NGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  358  VTDVSKLNGKTFTKNDRLLLWGTGKEAALNY-AKAHNINVLRMEDGFIRSVGLGSNLVAP  416
                    ++  T     ++WG   E      A+  ++ + RMEDGF+RS GLGS+L++P
Sbjct  358  --------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPP  409

Query  417  LSLVCDDLGIYFNAESPSRLEEILQHQQFTEADLIEAKQLQHALVSQHIGKYNVGEGTFS  476
            LSLV D  GIY++A  PS LE +L+H Q+T A+ + A +L++ LV   ++KYN+G + FS
Sbjct  410  LSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADFS  468

Query  477  LPNT--DKKKILVVGQVEDDASIRTGSPNIRTNLDLLKTVRAANPEAYIVYKPHSDVVSG  534
            LP    DKK ILV GQVEDDASI+TG+ +I++NL+LL+TVR  NP+AYIVYKPH+DV+ G
Sbjct  469  LPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVG  528

Query  535  NRIGHIAESQAVKLADQIAKTENVLDCINAVDELHTMTSLAGFEALLRNKTVHCYGLPFY  594
            NR G+I+   +  LAD  A   ++++CI+  DE+HTMTSL+GFEALL+ K VHCYGLPFY
Sbjct  529  NRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFY  588

Query  595  SHWGLTVDHCSFNRRNRKLSLLELIAGTLVYYPQYVNPNTGELTNAQTTIEIL  647
            + WGLTVD+    RR+RKL+L +LI  +L+ YP Y++P   +    + + E L
Sbjct  589  AGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYL  641

57) hcsA' in NC_016809


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  465 bits (1754),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 312/653 (48%), Positives = 453/653 (70%), Gaps = 26/653 (3%)

Query  6    IFSHGIKKIPHLASFF--PNEELAFARIFSVSKADSVLGWGLRPSTKKSRAYAQKYNLPF  63
            I+S GI +IPHL  F+  P + L++ R  +    +++  WG RPS+ K+ A A+    P 
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVP-QEVNAIAVWGHRPSAAKPVAIAKAAGKPV  62

Query  64   IALEDGFLRSLGLGVDGYPPLSMVVDKLGIYYDTTRPSTLEQLIQAGECDEVLAEKARSQ  123
            I LEDGF+RSL+LGV+G PPLS+VVD  GIYYD+++PS+LE+L+Q    +  L  +AR  
Sbjct  63   IRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREA  122

Query  124  ---IVTHQLSKYN--QTLVDYEKEGDEPLVLVIDQTFGDMAVKYGQADAEHFAQMLQAAI  178
               IVT ++SKYN   ++V  E E  + +VLV+DQTF DM+V YG+A++++FA ML+AA+
Sbjct  123  MHTIVTGDMSKYNLAPAFVADESERTN-IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  179  SENPNAKILVKTHPDVLSGKKQGYFSPNENYPSNVHFFSNPVNPISLIKAVEKVYCVTSQ  238
            +ENP+A I VK HPDVL GKK GYF+        V+++++ V+P SL++ V +VY VTSQ
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  239  MGFEALLMGKPVVTFGVPWFAGWGVTDDRHPNAKALTQSERRKVRSVLQLFYAAYFQYTR  298
             GFEALL GKPV  FG PW+A+WG+TDDRHP++  L  S RR   ++ +LF AAY++Y R
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCR  298

Query  299  YLNPNTGKSGTIFDVINHI-IHTKALNLRLQGNLYCVGISLWKRAVIKPFFRLPSCKLHF  357
            Y++P+TG  + +F V++ + ++ + L+ R +G L   G++LWK A++KPF+R P+ +L F
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQR-NGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  358  VTDVSKLNGKTFTKNDRLLLWGTGKEAALNY-AKAHNINVLRMEDGFIRSVGLGSNLVAP  416
                    ++  T     ++WG   E      A+  ++ + RMEDGF+RS GLGS+L++P
Sbjct  358  --------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPP  409

Query  417  LSLVCDDLGIYFNAESPSRLEEILQHQQFTEADLIEAKQLQHALVSQHIGKYNVGEGTFS  476
            LSLV D  GIY++A  PS LE +L+H Q+T A+ + A +L++ LV   ++KYN+G + FS
Sbjct  410  LSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADFS  468

Query  477  LPNT--DKKKILVVGQVEDDASIRTGSPNIRTNLDLLKTVRAANPEAYIVYKPHSDVVSG  534
            LP    DKK ILV GQVEDDASI+TG+ +I++NL+LL+TVR  NP+AYIVYKPH+DV+ G
Sbjct  469  LPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVG  528

Query  535  NRIGHIAESQAVKLADQIAKTENVLDCINAVDELHTMTSLAGFEALLRNKTVHCYGLPFY  594
            NR G+I+   +  LAD  A   ++++CI+  DE+HTMTSL+GFEALL+ K VHCYGLPFY
Sbjct  529  NRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFY  588

Query  595  SHWGLTVDHCSFNRRNRKLSLLELIAGTLVYYPQYVNPNTGELTNAQTTIEIL  647
            + WGLTVD+    RR+RKL+L +LI  +L+ YP Y++P   +    + + E L
Sbjct  589  AGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYL  641

58) ASU2_09035 in NC_018690


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  464 bits (1747),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 307/639 (49%), Positives = 447/639 (70%), Gaps = 19/639 (2%)

Query  6    IFSRGILKIPHLNAFL-HDSEIIAFPHLGTAPLVDNVIGWGLRPSTQKARDYAQKHGLLY  64
            I+S GI +IPHL+ FL +  + +++ +   +  V+ +  WG RPS+ K+   A+  G   
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLR-PVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPV  62

Query  65   IALEDGFLRSLGLGVMGYPPFSIVYDDVGIYYDTTRPSRLEALILHSQLTPEQMCAAERA  124
            I LEDGF+RSL+LGV G PP+S+V DD GIYYD+++PS LE L+ +       +  A  A
Sbjct  63   IRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREA  122

Query  125  ISLIQQHQLSKYNHNVDFDVPLDTAAPIVLVIDQTFGDMAVKFGSAGEEQFRQMLEAAIR  184
            +  I   ++SKYN    F       + IVLV+DQTF DM+V +G+AG ++F  MLEAA+ 
Sbjct  123  MHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMA  182

Query  185  ENPQAQIWVKTHPDVISGKKKGYLIDLHSYGNRIRLFAEDVNPLSLLKQVDKVYCVTSQM  244
            ENPQA+IWVK HPDV+ GKK GY+ DL++  +R+RL+AE+V+P SLL++V +VY VTSQ 
Sbjct  183  ENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYVVTSQY  241

Query  245  GFEALLLGKQVITFGVPWFAGWGVTDDRHPDIEILKQAQRRKNRSFIQLFAAAYLQYSRY  304
            GFEALL GK V  FG PW+A+WG+TDDRHP+  +L  + RR + ++ +LFAAAYL+Y RY
Sbjct  242  GFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCRY  299

Query  305  INPNNGKIGTIFDVIDYLS-KTKALNQRLSGSLYCIGMSLWKQAVIKPFFDLPLCKLHFV  363
            I+P+ G ++ +F V++ L  + + L+QR +G L   G++LWK A++KPF+  P  +L F 
Sbjct  300  IDPQTGEVSDLFTVLQWLQLQRRHLQQR-NGYLWAPGLTLWKSAILKPFLRTPTNRLSF-  357

Query  364  RSLKKLENRPLASDAKLLIWS-QGKPEILAFAAKHQLPILRMEDGFIRSVGLGSNLVAPL  422
                   +R  ++ +  ++W+ +G  +  A A +  LP+ RMEDGF+RS GLGS+L++PL
Sbjct  358  -------SRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  423  SLVVDDLGIYFNAQTPSRLEEILQYQEFSEQDLALAKQLRQRLIQANIGKYNVGNTGFRL  482
            SLV+D  GIY++A  PS LE +L+  +++  +   A +LRQRL++++++KYN+G ++F L
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADFSL  469

Query  483  SVT--DKKTILVPGQVEDDASIRFGSPQLKRNVDLLEKVRELNPDAYIIYKPHPDVVSGN  540
            +    DKK ILVPGQVEDDASI+ G+  +K N++LL  VRE NP+AYI+YKPHPDV+ GN
Sbjct  470  PAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGN  529

Query  541  RQGLVVHEQAVKFADEIVENANILDCINQVDEVHTMTSLAGFEALLRGKIVHCYGLPFYS  600
            R+G +  E +  +AD    +A+I++CI++ DEVHTMTSL+GFEALL+GK VHCYGLPFY+
Sbjct  530  RKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYA  589

Query  601  NWGLTQDHIPltrrtrqlrleelIAAVLVYYPQYVDPEK  639
             WGLT D+    RR R+L L +LI   L+ YP Y++P +
Sbjct  590  GWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTR  628


 Score =  122 bits (445),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 113/320 (36%), Positives = 187/320 (59%), Gaps = 22/320 (6%)

Query  13   KIPHLNAFLHD-SEIIAFPHLGTAPLVDNVIGWGLRPSTQKARDYAQKHGLLYIALEDGF  71
            K + L++FL+  ++ ++F++  TA+     + WG++ + Q+ R  AQ+ +L    +EDGF
Sbjct  340  KSAILKPFLRTPTNRLSFSRRCTAA--SACVVWGVK-GEQQWRAEAQRKSLPLWRMEDGF  396

Query  72   LRSLGLGVMGYPPFSIVYDDVGIYYDTTRPSRLEALILHSQLTPEQMCAAERAISLIQQH  131
            LRS GLG    PP+S+V D  GIYYD+TRPS LE L+ HSQLT  Q   AE+    + + 
Sbjct  397  LRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVES  456

Query  132  QLSKYNHNVDFDVPLDTAAP-IVLVIDQTFGDMAVKFGSAGEEQFRQMLEAAIRENPQAQ  190
            +LSKYN   DF +P  +    ++LV +Q  +D ++K G+ +     ++L +    NP+A 
Sbjct  457  KLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAY  516

Query  191  IWVKTHPDVISGKKKGYL-----IDLHSYGNRIRLFAEDVNPLSLLKQVDKVYCVTSQMG  245
            I  K HPDV+ G++KG +      +L  Y       A D + +  +++ D V  +TS  G
Sbjct  517  IVYKPHPDVLVGNRKGDIPAELTAELADYQ------ALDADIIQCIQRADEVHTMTSLSG  570

Query  246  FEALLLGKQVITFGVPWFAGWGVTDDRHPDIEILKQAQRRKNRSFIQLFAAAYLQYSRYI  305
            FEALL GK+V  +G+P +AGWG+T D H      + ++R ++ ++ +L+  A + Y+ YI
Sbjct  571  FEALLHGKHVHCYGLPFYAGWGLTVDEH------RCPRRERKLTLADLIYQALIVYPTYI  624

Query  306  NPNNGKIGTIFDVIDYLSKT  325
            +P   +  T+ +  +YL +T
Sbjct  625  HPTRLQPITVEEAAEYLIQT  644

59) hcsA in NC_022356


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  461 bits (1736),  Expect = 8e-131, Method: Compositional matrix adjust.
 Identities = 309/654 (48%), Positives = 454/654 (70%), Gaps = 28/654 (4%)

Query  6    IFSHGIKKIPHLASFFPN--QKLAFARIFSVPKA-DSVLGWGLRPSTKKSRAYAQKHNLP  62
            I+S GI +IPHL  F+++  QKL++ R  +VP+  +++  WG RPS+ K+ A A+    P
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLR--PVPQEVNAIAVWGHRPSAAKPVAIAKAAGKP  61

Query  63   FIALEDGFLRSLGLGVDGYPPLSMIVDKLGIYYDTTRPSTLEQLVLAGECDEVLAEKVRS  122
             I LEDGF+RSL+LGV+G PPLS++VD  GIYYD+++PS+LE+LV     +  L  + R 
Sbjct  62   VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQARE  121

Query  123  Q---IMTHQLSKYN--QTLVDYEKEGDEPLVLVIDQTFGDMAVKYGQADAEHFAQMLQAA  177
                I+T ++SKYN   ++V  E E  + +VLV+DQTF DM+V YG+A++++FA ML+AA
Sbjct  122  AMHTIVTGDMSKYNLAPAFVADESERTN-IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  178  ITENPKAKILVKTHPDVLSGKKQGYFSPNENYPSNVHFFSDPVNPISLIKAVEKVYCVTS  237
            ++ENP+A I VK HPDVL GKK GYF+        V+++++ V+P SL++ V +VY VTS
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYVVTS  239

Query  238  QMGFEALLAGKPVVTFGVPWFAGWGVTDDRHQNAKALAQSERRKVRSVLQLFYAAYFQYT  297
            Q GFEALLAGKPV  FG PW+A+WG+TDDRH ++  L  S RR   ++ +LF AAY++Y 
Sbjct  240  QYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYC  297

Query  298  RYLNPNTGTAGTIFDVINHI-IHTKALNLCLQGNLYCVGMSLWKRAVIKPFFRLPSCKLH  356
            RY++P+TG  + +F V++ + ++ + L+   +G L   G++LWK A++KPF+R P+ +L 
Sbjct  298  RYIDPQTGEVSDLFTVLQWLQLQRRHLQQR-NGYLWAPGLTLWKSAILKPFLRTPTNRLS  356

Query  357  FVKDVSKLNGKTFTKNDRLLLWGTGKEAALNY-AKAHNINMLRMEDGFIRSVGLGSNLVA  415
            F +  +  ++         ++WG   E      A+  ++ + RMEDGF+RS GLGS+L++
Sbjct  357  FSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  416  PLSLVCDDLGIYFNAESPSRLEEILQHQQFTEADLIEASQLQHALVSQHIGKYNVGEGTF  475
            PLSLV D  GIY++A  PS LE +L+H Q+T A+ + A +L++ LV   ++KYN+G + F
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADF  467

Query  476  SLPNTVKKK--ILVVGQVEDDASIRTASPNIRTNLDLLKTVCAANPQAYIVYKPHPDVVS  533
            SLP   K K  ILV GQVEDDASI+T++ +I++NL+LL+TV   NP+AYIVYKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  534  GNRIGHIAESQAVKLADQIAKTENVLDCINAVDELHTMTSLAGFEALLRNKTVHCYGLPF  593
            GNR G+I+   +  LAD  A   ++++CI+  DE+HTMTSL+GFEALL+ K VHCYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  594  YSHWGLTVDHCSFNRRNRKLSLLELISGTLVYYPQYVNPNTGELTNAQTAIEIL  647
            Y+ WGLTVD+    RR+RKL+L +LI  +L+ YP Y++P   +    + A E L
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYL  641

60) NMBM01240149_0081 in NC_017514


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  454 bits (1710),  Expect = 9e-129, Method: Compositional matrix adjust.
 Identities = 316/622 (51%), Positives = 433/622 (70%), Gaps = 24/622 (3%)

Query  1    MEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLEQLILAANMPSEMLNQAQQAID  60
            +EDGF+RSL+LGV G PP++LV DD GIYYD+++PS LE+L+      + +++QA++A++
Sbjct  65   LEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMH  124

Query  61   LILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGDMAIQYGGADEATFRQMFQTALAE  120
             I+T  +SKYN A  F  +   +  NIVLV+DQTF DM++ YG A+   F  M+++A+AE
Sbjct  125  TIVTGDMSKYNLAPAFVAD-ESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAE  183

Query  121  NPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLLAEDINPISLLQAVDKVYCVTSQMGF  180
            NP+AEIWVK HPDVL GKK GY++DL    RVRL+AE+++P SLL+ V +VY VTSQ GF
Sbjct  184  NPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGF  243

Query  181  EALLCGKPLVTFGLPWYAGWGVSDDRHPKIDSLVQTQRRAPRNllqlfaaaylqySRYLN  240
            EALL GKP+  FG PWYA+WG++DDRHP+   L  + RR++  L +LFAAAYL+Y RY++
Sbjct  244  EALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCRYID  301

Query  241  PNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISST  300
            P+TGE + LF V++ L   +R  ++  G L   G++LWK A+ KPF+  P+ RL F    
Sbjct  302  PQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRRC  361

Query  301  QKLAGVKLSDDARILAWGNGKEAIVRFAEQHH-IPLLRMEDGFIRSVGLGSNLVPPLSLV  359
                    +  +  + WG   E   R   Q+  +PL RMEDGF+RS GLGS+L+PPLSLV
Sbjct  362  --------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLV  413

Query  360  TDDMSIYFNAETPSRLEYILqnqnfddqdfqTALKLQKMLTENHISKYNVGSSDFTAPST  419
             D  +IY++A  PS LE +L++ ++   +   A KL++ L E+ +SKYN+G+ DF+ P+ 
Sbjct  414  LDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA-DFSLPAK  472

Query  420  --DKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGNRIG  477
              DK VILVPGQVEDDASI+ G+  I  NL+LLRTVRERNP+AYI+YKPHPDV+ GNR G
Sbjct  473  AKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKG  532

Query  478  HISPEDAARYADQTAEQTDILTCLQYADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWG  537
            +I++E +A  AD  A ++DI+ C+Q ADEVHTMTSL+GFEALL+GK V CYGLPFYAGWG
Sbjct  533  DIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWG  592

Query  538  LTQDLLPIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNN  597
            LT D    PRR R+L L +LI  +LI YP YIHP   Q+I  E AA+ LI+         
Sbjct  593  LTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPM---  649

Query  598  GLHRGYFA-KKLGKIKQLYRSF  618
                 +++ KK G++ + YR +
Sbjct  650  -----FITRKKAGRVIRYYRKL  666


 Score =  115 bits (421),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 104/334 (32%), Positives = 189/334 (57%), Gaps = 24/334 (7%)

Query  276  SLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDDARILAWGNGKEAI--VRFAEQHHI  333
            ++W+ +    F+  P  +L ++ +  +       +   I  WG+   A   V +A     
Sbjct  8    GIWRIPHLEKFLAQPCQKLSLLRPVPQ-------EVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  334  PLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILqnqnfddqdfqTAL  393
            P++R+EDGF+RS++LG N  PPLSLV DD +IY++A  PS LE ++Q++  +   +  A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  394  KLQKMLTENHISKYNVGSSDFTAPSTDKT-VILVPGQVEDDASIRYG--SPQIYRNLDLL  450
                 +   ++SKYN++++ F A  +++T ++LV +Q  +D S+ YG  +P+ +  +   
Sbjct  121  EAMHTIVTGDMSKYNLAPA-FVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  451  RTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQTDILTCLQYADEVHTM  510
                + +++  +  K HPDV+ G++ G ++   A++     AE+    + L+    V  +
Sbjct  180  AMAENPQAEIWV--KVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVV  237

Query  511  TSLTGFEALLRGKKVSCYGLPFYAGWGLTQD------LLPIPRRSRRLELWQLIAGTLIH  564
            TS  GFEALL GK V+C+G P YA+WGLT+D      LL+  R S  LE  +L+A++ ++
Sbjct  238  TSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLE--ELFAAAYLR  295

Query  565  YPDYIHPETHQAINAETAAQIL-IRQKNMQKNNN  597
            Y  YI+P+T +  +  T  Q L ++++++Q+ N 
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNG  329

61) WQG_2620 in NC_020515


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  452 bits (1704),  Expect = 3e-128, Method: Compositional matrix adjust.
 Identities = 315/658 (48%), Positives = 461/658 (71%), Gaps = 16/658 (2%)

Query  5    IFSSGILNIPHLAAFLPES-ELLPYARFRHQAVECVYGWGLKPTSLKARNYATQHNLPYI  63
            I+S+GI  IPHL  FL+++ + L+  R   Q V+ +  WG +P++ K+   A     P I
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  64   ALEDGFLRSTGLGVEGYPPFSMVVDDLGIYYDTRQPSRLEQLIlaadqsaellqqaslal  123
             LEDGF+RS +LGV+G PP+S+VVDD GIYYD+ +PS LE+L+     ++ L+ QA  A+
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAM  123

Query  124  aqIRQFRLSKYNHAPDFAQSVSAERPIVLVLDQTFGDMAVQCGQADAACFEQMLHAAIAE  183
              I    +SKYN AP F    S    IVLV+DQTF DM+V  G+A++  F  ML+AA+AE
Sbjct  124  HTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAE  183

Query  184  NPHAEIWVKTHPDVISGKKKGYLTQIAKGENVRLLAQDCNPLSLLAQAEKVYCVTSQMGF  243
            NP+AEIWVK HPDV+ GKK GY++++   + VRL+A++ +P SLL +  +VY VTSQ GF
Sbjct  184  NPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGF  243

Query  244  EALMLGKTVVTFGVPWFAGWGISDDRHPNVTALQTNGRRAERTFLQLFAAAYLQYSRYID  303
            EAL+ GK V  FG PW+A+WG++DDRHP+ + L  ++RR+  T+ +LFAAAYL+Y RYID
Sbjct  244  EALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYCRYID  301

Query  304  PNRGTSGSIFDVIDYLHRARQFGERVRGTLYCVGMSLWKRAVIKPFFRFPQCRVIFTSLA  363
            P+ G  + +F V++ L+  R+  ++  G L   G++LWK A++KPF+R P  R+ F+   
Sbjct  302  PQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS---  358

Query  364  HLQKNVKKQPLAKDAKLLIWS-NGKPEVLAFAQQYQLPILRMEDGFIRSVGLGSNLVAPL  422
                  ++   A     ++W+ +G  +  A AQ+  LP+ RMEDGF+RS GLGS+L++PL
Sbjct  359  ------RRCTAASAC--VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPL  410

Query  423  SLVTDDLGIYFNAQMPSRLEYILQNQQFSKSDLARASALRQQLIQANIGKYNVGSD-GFS  481
            SLV D  GIY++A  PS LE +L++ Q++ ++  RA  LRQ+L++++++KYN+G+D +++
Sbjct  411  SLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLP  470

Query  482  LNAQGKRTLLVPGQVEDDASIRSGSPVIKRNLDLLKAVRAQNPDAYILYKPHPDVVSGNR  541
             +A++K+ +LVPGQVEDDASI++G+  IK NL+LL++VR +NP+AYI+YKPHPDV+ GNR
Sbjct  471  AKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNR  530

Query  542  IGKIDAQVALQYANEIVENANILDCIMQVDEVHTMTSLAGFEALLRGKVVHCYGLPFYSN  601
             G I A+++ + A+    +A+I++CI + DEVHTMTSL+GFEALL+GK VHCYGLPFY+ 
Sbjct  531  KGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAG  590

Query  602  WGLTIDqlqlprrsrlltltellaavlIYYPLYVSPANGQFINAEMAIAILKQQKAKQ  659
            WGLT+D+ + PRR R LTL++L+   LI YP Y+ P+  Q I  E A   L Q   K 
Sbjct  591  WGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKP  648

62) NT08PM_0490 in NC_017764


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  444 bits (1671),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 307/660 (47%), Positives = 443/660 (68%), Gaps = 23/660 (3%)

Query  7    IFSKGMLKIPYLSGFFTQ---RLKMFSPFVTWKKERTCILEWGYKASSKKARHFAQQHDL  63
            I+S G+ +IP L  F++Q   +L ++ P     +E   I  WG ++S+ K+  +A+  + 
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  64   PYATIEDGFLRSIGLGVDGYPPFSLVYDDIGIYYDINQPSRLENLILSQDVLLQEKVDQV  123
            P   +EDGF+RS++LGV+G PP+SLV DD GIYYD ++PS LE+L+  +       + Q 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGN-TALISQA  119

Query  124  EYAIELICTHNLSKYNHAIDTPLQNTKRP-IVLVVDQTYGDMAVTFGNAEQSDFLHMLER  182
              A++ I T ++SKYN A     +++ R  IVLVVDQT+ DM+VT+GNA   +F  MLE 
Sbjct  120  REAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  183  AIIENPTAEIWLKTHPDVMCGKKQGYLTEYQQFPRVKVLSEDFNSISLLKHVDKVYCVTS  242
            A+ ENP AEIW+K HPDV+ GKK GY+++ +   RV++++E+ ++ SLL+HV +VY VTS
Sbjct  180  AMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTS  239

Query  243  HTGFEALLLGKTVVTFGAAWFSGWGLTDDRHAYIRQLKQSKRRAKRSLLQLFYAAYFQYC  302
            + GFEALL GK V  FG +W+++WGLTDDRH+    L  S RR+  +L +LF AAY++YC
Sbjct  240  QYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYC  297

Query  303  RYINPNTGKSGTLFDVIDYLIQAKKVTNQLAGDIYCVGMRFWKRKVVQPFFQFPRCRLHF  362
            RYI+P+TG  + LF V++ L   ++  +Q  G +   G+ +WK  +++PF++ P  RL F
Sbjct  298  RYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  363  VLNVHELKRCIHEKSQAKIVVWG-HSHIEVVEYAKQQQLPLLRMEDGFLRSVGLGSNLTP  421
                   +RC    + +  VVWG  ++ +    A+++ LPL RMEDGFLRS GLGS+L P
Sbjct  358  S------RRCT---AASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  422  PISLVLDDVGIYFDAQSRSRLEDILQHQSFTLKDLQRAETLKKTLIEQHIGKYNVGHTHL  481
            P+SLVLD  GIY+DA   S LE +L+H  +TL +  RAE L++ L+E  ++KYN+G +++
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADF  467

Query  482  CLTHIRQNK--LLVVGQVENDASIQYGSPHIRTNAELLCTVRKNNPQAYIIYKPHPDVVA  539
             L    ++K  +LV GQVE+DASI+ G+  I++N ELL TVR  NP+AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  540  GNRKNTDHLDDYRQYADFVVEKANILDCINQVDEVHTMTSLAGFEALLREKKVHCYGLPF  599
            GNRK     +   + AD+    A+I++CI++ DEVHTMTSL+GFEALL+ K VHCYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  600  YSNWGLTVDHlslnrrsrklsllelIAGVLIYYPQYIDPKTKTMIDVQRAVDILIEQRRK  659
            Y+ WGLTVD+    RR RKL+L +LI   LI YP YI+P     I V+ A + LI+  RK
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRK  647


 Score =  114 bits (416),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 113/338 (34%), Positives = 189/338 (56%), Gaps = 20/338 (5%)

Query  335  DIYCVGMRFWKRKVVQPFFQFPRCRLHFVLNVHELKRCIHEKSQAKIVVWGH--SHIEVV  392
            +IY  G+  W+   ++ F+  P  +L ++       R + +  +A I VWGH  S    V
Sbjct  3    GIYSPGI--WRIPHLEKFLAQPCQKLSLL-------RPVPQEVNA-IAVWGHRPSAAKPV  52

Query  393  EYAKQQQLPLLRMEDGFLRSVGLGSNLTPPISLVLDDVGIYFDAQSRSRLEDILQHQSFT  452
              AK    P++R+EDGF+RS++LG N  PP+SLV+DD GIY+DA   S LE ++Q+++  
Sbjct  53   AIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGN  112

Query  453  LKDLQRAETLKKTLIEQHIGKYNVGHTHLCLTHIRQNKLLVVGQVENDASIQYGSPHIRT  512
               + +A     T++  +++KYN++ + +     R N +LVV+Q  ND S+ YG++  + 
Sbjct  113  TALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHE  172

Query  513  NAELLCTVRKNNPQAYIIYKPHPDVVAGNRKNTDHLDDYR--QYADFVVEKANILDCINQ  570
             A +L +   +NPQA I  K HPDV+ G  K+T+ + D R  Q   ++ E+ +    + +
Sbjct  173  FAAMLEAAMAENPQAEIWVKVHPDVLEG--KKTGYFADLRATQRVRLIAENVSPQSLLRH  230

Query  571  VDEVHTMTSLAGFEALLREKKVHCYGLPFYSNWGLTVDHlslnrrsrklsllelIAGVLI  630
            V  V  +TS  GFEALL  K V C+G P Y++WGLT D+ + +           +  ++ 
Sbjct  231  VSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFA  290

Query  631  --Y--YPQYIDPKTKTMIDVQRAVDILIEQRRKIKNNK  664
              Y  Y +YIDP+T  + D+   ++ L  QRR +++ +
Sbjct  291  AAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRN  328

63) phyA in NC_002663


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  444 bits (1673),  Expect = 9e-126, Method: Compositional matrix adjust.
 Identities = 307/660 (47%), Positives = 443/660 (68%), Gaps = 23/660 (3%)

Query  18   IFSKGMLKIPYLSGFFTQ---RLKMFSPFVTWKKERTCILEWGYKASSKKARHFAQQHDL  74
            I+S G+ +IP L  F++Q   +L ++ P     +E   I  WG ++S+ K+  +A+  + 
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  75   PYATIEDGFLRSIGLGVDGYPPFSLVYDDIGIYYDINQPSRLENLILSQDVLLQEKVDQV  134
            P   +EDGF+RS++LGV+G PP+SLV DD GIYYD ++PS LE+L+  +       + Q 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGN-TALISQA  119

Query  135  EYAIELICTHNLSKYNHAIDTPLQNTKRP-IVLVVDQTYGDMAVTFGNAEQSDFLHMLER  193
              A++ I T ++SKYN A     +++ R  IVLVVDQT+ DM+VT+GNA   +F  MLE 
Sbjct  120  REAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  194  AIIENPTAEIWLKTHPDVMCGKKQGYLTEYQQFPRVKVLSEDFNSISLLKHVDKVYCVTS  253
            A+ ENP AEIW+K HPDV+ GKK GY+++ +   RV++++E+ ++ SLL+HV +VY VTS
Sbjct  180  AMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTS  239

Query  254  HTGFEALLLGKTVVTFGAAWFSGWGLTDDRHAYIRQLKQSKRRAKRSLLQLFYAAYFQYC  313
            + GFEALL GK V  FG +W+++WGLTDDRH+    L  S RR+  +L +LF AAY++YC
Sbjct  240  QYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYC  297

Query  314  RYINPNTGKSGTLFDVIDYLIQAKKVTNQLAGDIYCVGMRFWKRKVVQPFFQFPRCRLHF  373
            RYI+P+TG  + LF V++ L   ++  +Q  G +   G+ +WK  +++PF++ P  RL F
Sbjct  298  RYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  374  VLNVHELKRCIHEKSQAKIVVWG-HSHIEVVEYAKQQQLPLLRMEDGFLRSVGLGSNLTP  432
                   +RC    + +  VVWG  ++ +    A+++ LPL RMEDGFLRS GLGS+L P
Sbjct  358  S------RRCT---AASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  433  PISLVLDDVGIYFDAQSRSRLEDILQHQSFTLKDLQRAETLKKTLIEQHIGKYNVGHTHL  492
            P+SLVLD  GIY+DA   S LE +L+H  +TL +  RAE L++ L+E  ++KYN+G +++
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADF  467

Query  493  CLTHIRQNK--LLVVGQVENDASIQYGSPHIRTNAELLCTVRKNNPQAYIIYKPHPDVVA  550
             L    ++K  +LV GQVE+DASI+ G+  I++N ELL TVR  NP+AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  551  GNRKNTDRLDDYRQYADFVVEKANILDCINQVDEVHTMTSLAGFEALLREKKVHCYGLPF  610
            GNRK     +   + AD+    A+I++CI++ DEVHTMTSL+GFEALL+ K VHCYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  611  YSNWGLTVDHlslnrrsrklsllelIAGVLIYYPQYIDPKTKTMIDVQRAVDILIEQRRK  670
            Y+ WGLTVD+    RR RKL+L +LI   LI YP YI+P     I V+ A + LI+  RK
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRK  647


 Score =  113 bits (410),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 113/338 (34%), Positives = 189/338 (56%), Gaps = 20/338 (5%)

Query  346  DIYCVGMRFWKRKVVQPFFQFPRCRLHFVLNVHELKRCIHEKSQAKIVVWGH--SHIEVV  403
            +IY  G+  W+   ++ F+  P  +L ++       R + +  +A I VWGH  S    V
Sbjct  3    GIYSPGI--WRIPHLEKFLAQPCQKLSLL-------RPVPQEVNA-IAVWGHRPSAAKPV  52

Query  404  EYAKQQQLPLLRMEDGFLRSVGLGSNLTPPISLVLDDVGIYFDAQSRSRLEDILQHQSFT  463
              AK    P++R+EDGF+RS++LG N  PP+SLV+DD GIY+DA   S LE ++Q+++  
Sbjct  53   AIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGN  112

Query  464  LKDLQRAETLKKTLIEQHIGKYNVGHTHLCLTHIRQNKLLVVGQVENDASIQYGSPHIRT  523
               + +A     T++  +++KYN++ + +     R N +LVV+Q  ND S+ YG++  + 
Sbjct  113  TALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHE  172

Query  524  NAELLCTVRKNNPQAYIIYKPHPDVVAGNRKNTDRLDDYR--QYADFVVEKANILDCINQ  581
             A +L +   +NPQA I  K HPDV+ G  K+T+ + D R  Q   ++ E+ +    + +
Sbjct  173  FAAMLEAAMAENPQAEIWVKVHPDVLEG--KKTGYFADLRATQRVRLIAENVSPQSLLRH  230

Query  582  VDEVHTMTSLAGFEALLREKKVHCYGLPFYSNWGLTVDHlslnrrsrklsllelIAGVLI  641
            V  V  +TS  GFEALL  K V C+G P Y++WGLT D+ + +           +  ++ 
Sbjct  231  VSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFA  290

Query  642  --Y--YPQYIDPKTKTMIDVQRAVDILIEQRRKIKNNK  675
              Y  Y +YIDP+T  + D+   ++ L  QRR +++ +
Sbjct  291  AAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRN  328

64) phyA in NC_016808


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  442 bits (1663),  Expect = 5e-125, Method: Compositional matrix adjust.
 Identities = 306/660 (47%), Positives = 443/660 (68%), Gaps = 23/660 (3%)

Query  7    IFSKGMLKIPYLSGFFTQ---RLKMFSPFVTWKKERTCILEWGYKASSKKARYFAQQHDL  63
            I+S G+ +IP L  F++Q   +L ++ P     +E   I  WG ++S+ K+  +A+  + 
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  64   PYATIEDGFLRSIGLGVDGYPPFSLVYDDIGIYYDINQPSRLENLILSQDVLLQEKVDQV  123
            P   +EDGF+RS++LGV+G PP+SLV DD GIYYD ++PS LE+L+  +       + Q 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGN-TALISQA  119

Query  124  EYAIELICTHNLSKYNHAIDTPLQNTKRP-IVLVVDQTYGDMAVTFGNAEQSDFLHMLER  182
              A++ I T ++SKYN A     +++ R  IVLVVDQT+ DM+VT+GNA   +F  MLE 
Sbjct  120  REAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  183  AIIENPTAEIWLKTHPDVMCGKKQGYLTEYQQFPRVKVLSEDFNSISLLKHVDKVYCVTS  242
            A+ ENP AEIW+K HPDV+ GKK GY+++ +   RV++++E+ ++ SLL+HV +VY VTS
Sbjct  180  AMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTS  239

Query  243  HTGFEALLLGKTVVTFGAAWFSGWGLTDDRNAYIRQLKQSKRRAKRSLLQLFYAAYFQYC  302
            + GFEALL GK V  FG +W+++WGLTDDR++    L  S RR+  +L +LF AAY++YC
Sbjct  240  QYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYC  297

Query  303  RYINPNTGKSGTLFDVIDYLIQAKKVTNQLAGDIYCVGMRFWKRKVVQPFFQFPRCRLHF  362
            RYI+P+TG  + LF V++ L   ++  +Q  G +   G+ +WK  +++PF++ P  RL F
Sbjct  298  RYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  363  VLNVHELKRCIHEKSQAKIVVWG-HSHIEVVEYAKQQQLPLLRMEDGFLRSVGLGSNLTP  421
                   +RC    + +  VVWG  ++ +    A+++ LPL RMEDGFLRS GLGS+L P
Sbjct  358  S------RRCT---AASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  422  PISLVLDDVGIYFDAQSRSRLEDILQHQSFTLKDLQRAETLKKTLIEQHIGKYNVGHTHL  481
            P+SLVLD  GIY+DA   S LE +L+H  +TL +  RAE L++ L+E  ++KYN+G +++
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADF  467

Query  482  CLTHIRQNK--LLVVGQVENDASIQYGSPHIRTNAELLCTVRKNNPQAYIIYKPHPDVVA  539
             L    ++K  +LV GQVE+DASI+ G+  I++N ELL TVR  NP+AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  540  GNRKNTDRLDDYRQYADFVVEKANILDCINQVDEVHTMTSLAGFEALLREKKVHCYGLPF  599
            GNRK     +   + AD+    A+I++CI++ DEVHTMTSL+GFEALL+ K VHCYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  600  YSNWGLTVDHlslnrrsrklsllelIAGVLIYYPQYIDPKTKTMIDVQRAVDILIEKRRK  659
            Y+ WGLTVD+    RR RKL+L +LI   LI YP YI+P     I V+ A + LI+  RK
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRK  647

65) phyA in NC_017027


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  439 bits (1652),  Expect = 4e-124, Method: Compositional matrix adjust.
 Identities = 306/681 (45%), Positives = 450/681 (67%), Gaps = 28/681 (4%)

Query  7    IFSKGMLKIPYLSGFFTQ---RLKMFSPFVTWKKERTCILEWGYKASSKKARYFAQQHDL  63
            I+S G+ +IP L  F++Q   +L ++ P     +E   I  WG ++S+ K+  +A+  + 
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPV---PQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  64   PYATIEDGFLRSIGLGVDGYPPFSLVYDDIGIYYDINQPSRLENLILSqdvllqeqvdqv  123
            P   +EDGF+RS++LGV+G PP+SLV DD GIYYD ++PS LE+L+  +       + Q 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLV-QDKAGNTALISQA  119

Query  124  KYAIELICTHNLSKYNHAIDTPLQNTKRP-IVLVVDQTYGDMAVTFGNAGQGDFLHMLER  182
            + A++ I T ++SKYN A     +++ R  IVLVVDQT+ DM+VT+GNAG  +F  MLE 
Sbjct  120  REAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  183  AIIENPTAEIWLKIHPDVMCGKKQGYLTEYQQFPRVKVLSEDFNSISLLKHVDKVYCVTS  242
            A+ ENP AEIW+K+HPDV+ GKK GY+++ +   RV++++E+ ++ SLL+HV +VY VTS
Sbjct  180  AMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTS  239

Query  243  HTGFEALLLGKTVVTFGAAWFSGWGLTDDRHAYIRQLKQSKRRAKRSFLQLFYSAYFQYC  302
            + GFEALL GK V  FG +W+++WGLTDDRH+    L  S RR+  ++ +LF +AY++YC
Sbjct  240  QYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALL--SARRGSATLEELFAAAYLRYC  297

Query  303  RYINPNTGKSGTLFDVIDYLIQAKKVTNQLAGDIYCVGMRFWKRKVVQPFFQFPRCRLHF  362
            RYI+P+TG  + LF V++ L   ++  +Q  G +   G+ +WK  +++PF++ P  RL F
Sbjct  298  RYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSF  357

Query  363  VQNIHELKRCIRDKSQAKVVVWGHSHSEE-VEYAKQQQLPLLRMEDGFLRSIGLGSNLTP  421
                   +RC    + +  VVWG    ++    A+++ LPL RMEDGFLRS GLGS+L P
Sbjct  358  S------RRCT---AASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLP  408

Query  422  PISLVLDDVGIYFDAQSRSRLEDILQHQSFNLRDLQLAEMLKKTLIAQHISKYNVGHTHL  481
            P+SLVLD  GIY+DA   S LE +L+H  + L +   AE L++ L+   +SKYN+G +++
Sbjct  409  PLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG-ADF  467

Query  482  CLTHIRQNK--LLVVGQVENDASIQYGSPHIRTNLDLLCTVRKNNLQAYIIYKPHPDVVA  539
             L    ++K  +LV GQVE+DASI+ G+  I++NL+LL TVR  N +AYI+YKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  540  GNRKNTDRLDDYRQYADFVVEKANILDCINQVDEVHTMTSLAGFEALLREKKVHCYGLPF  599
            GNRK     +   + AD+    A+I++CI++ DEVHTMTSL+GFEALL+ K VHCYGLPF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  600  YSNWGLTVDHlslnrrsrklsllelIAGVLIYYPQYIDPKTKTMIDVQRAVDILIEQRRK  659
            Y+ WGLTVD+    RR RKL+L +LI   LI YP YI+P     I V+ A + LI+  RK
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRK  647

Query  660  I-----KNNELHTNYFMNIFM  675
                  K+      Y+ +++M
Sbjct  648  PMFITRKKAGRVIRYYRKLIM  668

66) GEM_2747 in NC_018513


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  432 bits (1627),  Expect = 4e-122, Method: Compositional matrix adjust.
 Identities = 320/709 (46%), Positives = 464/709 (66%), Gaps = 40/709 (5%)

Query  9    VPVWSVGLWTLRR--SVLLDARVKLCWPWQVGRATGFLG-WGKresgaraerwaeaaGVR  65
            + + S G+W + +    L ++  KL   + V +    ++ WG R S+A++   A AAG  
Sbjct  2    IGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKP  61

Query  66   TLRLEDGFLRSVSLGVLGDTALSIVIDDLGIYYDASRPSRLEMLVKDVATPDGERGDASR  125
             +RLEDGF+RS+ LGV G+ +LS+V+DD GIYYDAS+PS LE LV+D A        A  
Sbjct  62   VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAG-----NTALI  116

Query  126  NEADRAMSLIVRHGLSKYNHAPDFVPPDDWRDDAILVIDQTRGDVAVRLGGADESSFREM  185
            ++A  AM  IV  ++SKYN AP FV+ +  R + +LV+DQT  D++V  G A+   F  M
Sbjct  117  SQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAM  176

Query  186  LAAALAENPGKPVWIKTHPDVMCGKKAGYLVDASFSDprvrllpvdvsppsllKRVGKVY  245
            L AA+AENP   +W+K HPDV+ GKK+GY+ D   +  RVRL++ +VSP SLL++V++VY
Sbjct  177  LEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLR-ATQRVRLIAENVSPQSLLRHVSRVY  235

Query  246  AVSSQMGFEAQLCGKPVVTFGLPWYAGWGLTDDRHADAPIVAGRRGSATLHQLFDAAYLR  305
             V+SQ GFEA L GKPV  FG PWYA+WGLTDDRH++++++++RRGSATL++LF AAYLR
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLR  295

Query  306  YCRYIDPETGSRGTIFDVIAHLAKQRRLNEVTRGELVCVGLSLWKRSVVAPFLRHGGARV  365
            YCRYIDP+TG  + +F V+  L  QRR  +   G L   GL+LWK +++ PFLR    R+
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRL  355

Query  366  RFVDSPGALRRLPPDASRRVVLWGARRPDV-AAVAQELGLPVLRMEDGFIRSVGLGSNLI  424
             F       RR    A+   V+WG +  +   A AQ  +LP+ RMEDGF+RS GLGS+L+
Sbjct  356  SFS------RR--CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLL  407

Query  425  APLSLVIDDLGIYFDPRTPSRLEAILERGGFDDAELAEARSVRAALVDARIGKYNVGNGG  484
            +PLSLV+D  GIY+D+  PS LE +L+++ +  A+   A  +R  LV+++++KYN+G + 
Sbjct  408  PPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADF  467

Query  485  VALPSPRPAKVILVPGQVEDDASIRTGSSWISTNLGLLSSVRAAHPDAFVIFKPHPDVVS  544
               + ++  KVILVPGQVEDDASI+TG+  I +NL LL +VR  +P+A++++KPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  545  GNRAGAVPLHEARRLADVVAPESDVIACVEQADEVHTMTSLTGFEALLRGKRVVCYGAPF  604
            GNR G +P + +  LAD  A ++D+I C+++ADEVHTMTSL+GFEALL+GK+V CYG PF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  605  YAGWGLTHDVFANASSGTGHATDASDTPDGHPVWSRRCRRLALDELIAGTLLRYPRYVHP  664
            YAGWGL                    T D H   +RR R+L+L +LI  +L+ YP Y+HP
Sbjct  588  YAGWGL--------------------TVDEHRC-PRRERKLTLADLIYQALIVYPTYIHP  626

Query  665  VSRAVIDAQHAIT-LLHAQRQSTGQGKLKRNRLKQQCGKVKMWALTTYA  712
                 I  ++A   L+++ R++    + K  R+ +   K+ M     ++
Sbjct  627  TRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG  675

67) Cpha266_2331 in NC_008639


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  400 bits (1503),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 279/640 (44%), Positives = 423/640 (67%), Gaps = 28/640 (4%)

Query  9    IAVFSKGMRRIPFLGELLGEEICFPGEVFDAT---ISAAAGWGLRPSMQRAKRYAERYEL  65
            I+++S G++RIP L  +L++  C    ++ +    ++A A WG RPS  ++   A     
Sbjct  2    IGIYSPGIWRIPHLEKFLAQP-CQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  66   PLLSLEDGFLRSYGTG-EGFPPVSIVVDEFGIYFDSTRPSALERLLESKTDLIAGIEADV  124
            P++ LEDGF+RS + G +G PP+S+VVD+ GIY+D+++PSALE+L++ K++  +++ ++ 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAG-NTALISQA  119

Query  125  DRAVRLIVKHRLSKYNHAPDLSPGTLGENDVMRVLVIDQTFGDSSVVYGDADERSFMNML  184
              A++ IV   +SKYN AP + ++     ++  VLV+DQTF D SV YG+A+ + F  ML
Sbjct  120  REAMHTIVTGDMSKYNLAPAFVADESERTNI--VLVVDQTFNDMSVTYGNAGPHEFAAML  177

Query  185  EAALEENPLATVYVKTHPEVISGRKKGYLTGVQEIRRVVFLRQAIDPYALVAEMDRVYTV  244
            EAA+ ENP A + VK HP+V+ G+K GY+++++  +RV ++ + + P +L+ ++ RVY V
Sbjct  178  EAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVV  237

Query  245  SSTMAFEALLAGKPVTCFGMPWYAGWGVTDDRCS-----CGRRTKRRSVSELFAAAYMHY  299
            +S  +FEALLAGKPVTCFG PWYA+WG+TDDR +      +RR    ++ ELFAAAY++Y
Sbjct  238  TSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLRY  296

Query  300  ARYLDPVTHRRGSLFDVIGWL-VRQREMADRYPGRMICQGFRKWKAVNVRPFLSLNPQNT  358
             RY+DP T   + LF V+ WL +++R++ +R  G +   G+  WK+  ++PFL    +  
Sbjct  297  CRYIDPQTGEVSDLFTVLQWLQLQRRHLQQR-NGYLWAPGLTLWKSAILKPFLRTPTNRL  355

Query  359  LFAKSDAEARQLRVGPEDLFVRWGIGGESEPGVSAPDCGPRRLCMEDGFVRSVGLGSDLI  418
             F++        R  +    V WG+ GE +    A   +     MEDGF+RS GLGSDL+
Sbjct  356  SFSR--------RCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLL  407

Query  419  LPLSVVLDERGIYFDPNRPSDLENLLNAASFTAGELAEAERVRRFIVTHGITKYNIDTRR  478
             PLS+VLD RGIY+D+ RPSDLE LLN + +T ++   AE++R+ +V   ++KYN+++  
Sbjct  408  PPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADF  467

Query  479  QPTWQTGGRRVVFVPGQVEDDASILFGSRFVRTNMELLRKVRESLPEAFIVYKPHPDVLS  538
                ++ +++V++VPGQVEDDASI  G+  +++N+ELLR VRE  P+A+IVYKPHPDVL 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  539  GNRSGRVMDSEIQGLADVIEPVLSAVSCIEAAEEVHTMTSLTGFDALLRRKRVIVYGEPF  598
            GNR G +       LAD        + CI+ A+EVHTMTSL+GF+ALL+ K+V  YG PF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  599  YAGWGLTVDTATDGVSFRRRNRRLTLDELVAGALLRYPIY  638
            YAGWGLTVD         RR+R+LTL +L+  AL+ YP Y
Sbjct  588  YAGWGLTVDEH----RCPRRERKLTLADLIYQALIVYPTY  623

68) wcbA in NC_010170


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  398 bits (1496),  Expect = 9e-112, Method: Compositional matrix adjust.
 Identities = 285/635 (45%), Positives = 412/635 (65%), Gaps = 23/635 (3%)

Query  35   ARDVDAIAGWGLRPTTRWPRAYAMRKSLPYVALEDGFLRSYAPGQRA-PSLSLVVDGDGI  93
            +++V+AIA WG RP++  P A A   + P + LEDGF+RS   G  + P+LSLVVD+ GI
Sbjct  33   PQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGI  92

Query  94   YYAAGSGSSLETLLNSDADLLHGIEDACARARDLICRAQLGKYNAAPSLPAGMLGAGDRG  153
            YY A+  S+LE L++  A+    I +A    + ++  ++++KYN AP++ A+   +    
Sbjct  93   YYDASKPSALEKLVQDKAGNTALISQAREAMHTIV-TGDMSKYNLAPAFVAD--ESERTN  149

Query  154  RVLVVDQTVGDAAIVHGGANAATFERMLAAALNENPGATVYIKTHPEVGGGAKQGYYSSL  213
             VLVVDQT  D ++  G A +  F  ML AA+ ENP A + +K HP+V  G K GY++ L
Sbjct  150  IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADL  209

Query  214  APMARVVLITEPVSPMSLVSHMDRVYVATSHLGFEALLAGKPVTCFGTPWYAGWGVTEDR  273
             +  RV LI+E VSP SL+ H+ RVYV TS+ GFEALLAGKPVTCFG PWYA+WG+T+DR
Sbjct  210  RATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDR  269

Query  274  QACAHRMRRR----SVQELFAAAYFHYSRYLDPTTHGEGSIFHAIDWLTRQKLMAEHMQG  329
            ++ +  +  R    +++ELFAAAY++Y RY+DP T   + +F  ++WL   +L   H+Q 
Sbjct  270  HPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWL---QLQRRHLQQ  326

Query  330  RSI---AVGFRRWKARHVREFLGLDASRVHFVRNARAAARLAPGPQDRLVVWGNDSVDQV  386
            R+    A G+  WK+  ++ FL   ++R+ F R   AA+          VVWG  + +Q 
Sbjct  327  RNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCTAASAC--------VVWGVKGEQQW  378

Query  387  RCLARRVGAKLLRMEDGFLRSVGLGSDFVPPLSLVLDGSGMYFDPREPSDLENLLNQHAF  446
            R  A+R +  L RMEDGFLRS GLGSD++PPLSLVLD  G+Y+D+  PSDLE LLN+  +
Sbjct  379  RAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQL  438

Query  447  SVADLCRARAIRQSITDLGLTKYNIEQRRAPEWRAKGKRIILVPGQVEDDASIRYGCGEV  506
            ++A+  RA  +RQ + +  L+KYN+    +   +AK+K++ILVPGQVEDDASI+ G   +
Sbjct  439  TLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSI  498

Query  507  RSNLGLLQATRAEHPEAYIVYKPHPDVRARNRAGRMHLSRAMQYADEVELSCSVVSCIEA  566
            +SNL LL++ R  +P+AYIVYKPHPDV   NR G +    + + AD   L   ++ CI+ 
Sbjct  499  KSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQR  558

Query  567  CDEVHTMTSLTGFDALLRNKRVVVYGRPFYAGWGLTIDKLPMARRTRTLNLDELVAGTLL  626
             DEVHTMTSL+GF+ALL+ K+V  YG PFYAGWGLT+D    +RR R L L +L+  +L+
Sbjct  559  ADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALI  618

Query  627  HYPLYWDPV-LKGYTTCEATINQLVRQRNAIIAAR  660
             YP Y +P  L+  T  EA+   +   R++++ +R
Sbjct  619  VYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITR  653

69) kpsC in NC_007974


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  393 bits (1478),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 283/651 (44%), Positives = 429/651 (66%), Gaps = 17/651 (2%)

Query  2    VFAVVTPGLWRTPGLRRFFHEGVA----FRP-RQHVDAVLGWGDKPSSIKARAWAARRHL  56
            ++++ +PG+WR P L +F+ +       +RP  Q+V+A+  WG++PS+ K+ A A     
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  57   PFLSVEDGFLRSIHPGRSRQGLLSLVVDDLGIYYDAHHPSRLEQYIAQgdasaaerdaga  116
            P + +EDGF+RS++ G + +  LSLVVDD GIYYDA  PS LE+ + +  +++A    + 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  117  raMQLVLQHRLSKYNHMGELQLPSSTPGKPRVLVVDQTEGDLSLLRGGASADTFARMIAV  176
             AM+ ++   +SKYN    + ++  +     VLVVDQT  D+S+  G A+++ FA M+  
Sbjct  121  EAMHTIVTGDMSKYNLAPAF-VADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEA  179

Query  177  ALADHPAAEIWIKTHPDVLSGKRRGHYEQCRLDSRVHFLAQECCPLSLLTQMDHVYVATS  236
            A+A++P AEIW+K HPDVL GK+ G + + R   RV+++A++  P SLL ++ +VYV TS
Sbjct  180  AMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTS  239

Query  237  HMGFEALMVGKPVTCFGLPWYAGWGLTHDVHPEaarlalrrggKRNVVDLFVAAYIQYTR  296
            + GFEAL+ GKPVTCFG PWYA+WGLT+D HP++A L+ RRG+   + +LF AAY++Y R
Sbjct  240  QYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLRYCR  298

Query  297  YIHPVTGESASIFDVIKWLACNKAIEQEGRAPTYCVGMSLWKRATVMPFLAASTIRSLRH  356
            YI+P TGE + +F V++WL  ++   Q+  +     G++LWK A + PFL ++T R    
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR----  354

Query  357  LSPDKLSRLPQDSTIALWGDRHAGL-IarararGLTVLQMEDGFVRSAGLGSDLHAPLSL  415
            LS  +  R    S+  +WG +      A A+ ++L + +MEDGF+RS+GLGSDL +PLSL
Sbjct  355  LSFSR--RCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSL  412

Query  416  AIDPHGVHYDPKSASKLEQLLSTSTVNHDDAARGRRIRESLVRNGIDKYNLDHATTPVLP  475
             +D +G+ YD+  +S LE LL+ S +   +  R+ ++R+ LV + + KYNL+   +  LP
Sbjct  413  VLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFS--LP  470

Query  476  AQALGRRIILVIGQVEDDASVRIGSTLVKGNDALIAVTRRANPDAWLIYKSHPDVEAGNR  535
            A+A ++++ILV GQVEDDAS++ G+  +K+N  L+   R  NP+A ++YK+HPDV  GNR
Sbjct  471  AKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNR  530

Query  536  IGSLKPA-SETLADQIITEASLGACLVLADEVHVMTSLSGFEALLRGKVVHCYGAPFYAG  594
             G + +  +  LAD    +A +  C+  ADEVH MTSLSGFEALL+GK VHCYG PFYAG
Sbjct  531  KGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAG  590

Query  595  WGLTTDHFPLPRRQRRLTLDELVFVALCLYPRYRLPGVEGFCSVEDVVDWL  645
            WGLT D+   PRR+R+LTL +L++ AL +YP Y  P      +VE+  + L
Sbjct  591  WGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYL  641

70) Hoch_5948 in NC_013440


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  380 bits (1428),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 293/644 (46%), Positives = 434/644 (68%), Gaps = 23/644 (3%)

Query  10   KVAAFSPGMAEIPHLAALLGADEVRFRPSRYEASGFDAVVGWGNKPTAEPAIAYAREHDL  69
             ++ +SPG+  IPHL  +L+    ++   R  +   +A+  WG++P+A  ++A A+  + 
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  70   PYWRVEDGFLRSVGLGRGGAAPLSVVLDDRGIYYDARTPSRLEAILAGDEPCSALLDDPA  129
            P  R+EDGF+RS++LG  G +PLS+V+DD GIYYDA  PS LE ++ +        ++ A
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA------GNTA  114

Query  130  FLTRADRALQRILAARLSKYNDAPPRSVGELLGERVRKRVLVVDQTQGDLSITHGLADVE  189
            ++++A  A++ I+++ +SKYN AP+   +E  +ER  + VLVVDQT  D+S+T G A+ +
Sbjct  115  LISQAREAMHTIVTGDMSKYNLAPAFVADE--SERT-NIVLVVDQTFNDMSVTYGNAGPH  171

Query  190  RFGAMLDAAMCEHAEAEILVKVHPDVVAGHRRGCVPRVLNSARVRVLAEHVNPVELLREV  249
             F+AML+AAM E+++AEI VKVHPDV+ G + G  + +  + RVR++AE+V+P  LLR+V
Sbjct  172  EFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHV  231

Query  250  DHVYVVTSQLGFEALLTRTPVTTFGAPFYAGWGLSDDRAAP----ERRTRKRTLVQAFAA  305
             +VYVVTSQ GFEALL+  PVT FG P YA+WGL+DDR +       R    TL + FAA
Sbjct  232  SRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAA  291

Query  306  AYLLYPRYLDPETGERGSIEQVIDHLSRQRAMFEENRGTIFCFGFRPWKRGYVRDYLRSP  365
            AYL Y RY+DP+TGE + +  V++ L  QR  +++  G +   G+  WK + ++ +LR+P
Sbjct  292  AYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTP  351

Query  366  GNRVVFARSAAHAESQGCDEQTSALLVWGQRAREDVAALAERHALPVWRMEDGFLRSVGL  425
             NR+ F+R    + + +C       +VWG ++ ++  A A+R +LP+WRMEDGFLRS GL
Sbjct  352  TNRLSFSRRC--TAASAC-------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGL  402

Query  426  GSDFVTPASLVVDKAGVYYDPRTPSALEKLLAEHAFSDaereraralreaIVSAGVSKYN  485
            GSD++ P SLV+DK G+YYD+  PS LE LL +  ++ A++ RA  LR+ +V + +SKYN
Sbjct  403  GSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYN  462

Query  486  VGQRQPLAV-PEGARVVLVPGQVEDDASIALGCPGICSNEDLLRAARVAAPDAHIVYKPH  544
            +G   +L+  + + +V+LVPGQVEDDASI  G  +I SN +LLR+ R   P+A IVYKPH
Sbjct  463  LGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPH  522

Query  545  PDVLAGNRQGQVSDPVDRGLCDQLEDQASLADCLAAAHEVHTLTSLVGFEALLRGLPVTV  604
            PDVL GNR+G+++  +   L D    +A + +C+  A+EVHT+TSL GFEALL+G  V  
Sbjct  523  PDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHC  582

Query  605  HGQPFYAGWGLTAdrepvprrrrrlrldelvAGALILYPRYLHP  648
             G PFYAGWGLT D +  PRR R+L L +L+  ALI+YP Y+HP
Sbjct  583  YGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHP  626

71) Alvin_0211 in NC_013851


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  363 bits (1362),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 286/650 (44%), Positives = 423/650 (66%), Gaps = 24/650 (3%)

Query  1    MIGVLSRGILRIPGLEVVLGEPVVAVSPWRARP-ELSAIAGWGLKATSRRARDYARRHGL  59
            MIG+ S GI RIP LE  L++P   +S  R+ P E++AIA WG ++++ ++   A+  G 
Sbjct  1    MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  60   PYLALEDGFLRSVGLG-NQDPPLSLIVDDLGVYYDATRPSRLETLIRHPLSDTE-TARAR  117
            P + LEDGF+RS++LG N +PPLSL+VDD G+YYDA++PS LE L+++  ++T   ++AR
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  118  SLRSAWCAARVSKYNHLRE--EREPLPSPAVLVVDQTFGDPAITHGLADSKSFQHLLEAA  175
                +  ++ +SKYN        E+  +  VLVVDQTF D ++T G A++  F  +LEAA
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  176  LDENPRAVILVKIHPDVFAGRKRGHFDPErlarlervrlltrDLHPVSLLERVETVYTVT  235
            + ENP+A I VK+HPDV+ G+K G F    L   +RVRL++ ++ P SLL +V  VY VT
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFA--DLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  236  SQLGFEALLWGRRARVFGMPFYAGWGLTEDELPRLE----RRAPVGLESLIHGALIAAPR  291
            SQ GFEALL G+    FG P YA+WGLT+D  P+      RR++  LE L+ +A +   R
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCR  298

Query  292  YLDPETGERCEIERVLEWMGLQRRMRERFPETIRALNFSAWKRPLVRRFMQG--SRVEFE  349
            Y+DP+TGE  ++  VL+W+ LQRR  ++    ++A  ++ WK ++++ F++   +R+ F 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFS  358

Query  350  TRPHDARQ-----IKGDARIPLAVWGLAAAPEGRTILRLEDGFLRSVGLGADLVEPLSWV  404
             R   A       +KG+ +     W   A   +  + R+EDGFLRS GLG+DL+ PLS V
Sbjct  359  RRCTAASACVVWGVKGEQQ-----WRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLV  413

Query  405  IDQRGLYYDPSRPSDLEILLETQVFDeallerarrlrerIVASGLTKYNVGAA-HWQRPA  463
            +D+RG+YYD++RPSDLE+LL+   +  A   RA +LR+R+V S L+KYN+GA       A
Sbjct  414  LDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKA  473

Query  464  TARRVILVPGQVETDASIRLGAPGIRHNLELLRAVREAHPDAYVLYKPHPDVTAGLRAAG  523
              ++VILVPGQVE DASI+ G+ +I+ NLELLR+VRE +P+AY++YKPHPDV  G R ++
Sbjct  474  KDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGD  533

Query  524  EHESAARTWCDELIVDVPMATLLDAVDELHVLTSLAGFEALLRGKRVVCHGQPFYAGWGL  583
                 +    D   +D  +   ++  DE+H +TSL+GFEALL+GK+V C G PFYAGWGL
Sbjct  534  IPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGL  593

Query  584  TEDRLPPARRTRRLSLEMLVAGALLLYPTYVSRVTSRFTTAEHALDELLE  633
            T D    +RR R+L+L  L+  AL++YPTY+     +  T E+A + L++
Sbjct  594  TVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQ  643

72) Dvul_2595 in NC_008751


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  360 bits (1352),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 269/636 (43%), Positives = 396/636 (63%), Gaps = 29/636 (4%)

Query  15   LFSQTLYRIPHLNLFLHD-------MENCTIQRNTVLGWGHKPTADKARRYAAEHNLPYI  67
            ++S  + RIPHL+ FL +       +     + N++  WGH+P+A K+   A     P I
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  68   AVEDGFLRSLDLGCRGAQPLSLVVDHTGIYYDASGPSDLEDFLNSSGWETPELMDSARLA  127
             +EDGF+RSLDLG  G  PLSLVVD+ GIYYDAS PS LE +++  +     L+  AR A
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALISQAREA  122

Query  128  MREIIRHSLSKYNHAPESSESVWGDGLAPRVLVLDQTVGDASVTLGMADEECFHAMLEKA  187
            M+ I+   +SKYN AP           +  VLV+DQT  D SVT G A+ + F AMLE A
Sbjct  123  MHTIVTGDMSKYNLAPAFVAD--ESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  188  LTVHPHSHVCVKTHPDVIAGKKKGYLTEYATKHGVKILAVEHAPLSLLSRADVVYTVTSQ  247
            ++ +P++++ VK HPDV+ GKK GY+++  + + V+++A + +P SLL +   VY VTSQ
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  248  MGFEALMLDKEVHCFGMPFYAGWGLTNDMKTCSR----RKRQRSLEEVFTAAYLLYARYV  303
             GFEAL+ +K V CFG P YA+WGLT+D    S     R+   +LEE+F+AAYL Y RY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  304  NPIRSERCDIHDTISLLTEQRRQNESNRCFHACVGFRWWKRPYARAYLQSTGGQTVFYRN  363
            +P  +E  D+   +  L  QRR+ +    +    G+  WK +  +++L++   +  F R 
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  364  AKQAIYDAWTKGGELVTWSSNVDTELQKACDERGIRLARMEDGFIRSVGLGSNFNWPYSL  423
                     T ++  V W+ + + + +   + +++ L RMEDGF+RS GLGS++  P SL
Sbjct  361  C--------TAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSL  412

Query  424  VVDRKGIYYDPSLPSELEDILNAIHEHPEHAALLKRAATLCAIILEKGLTKYNTGFRVEF  483
            V+D++GIYYD++ PS+LE +LN  H +   A  + RA  L   ++E  L+KYN G   +F
Sbjct  413  VLDKRGIYYDATRPSDLEVLLN--HSQLTLAQQM-RAEKLRQRLVESKLSKYNLG--ADF  467

Query  484  -LPKLPKEKTIILVPGQVEDDASVRCGGFGM-TNLDLLRAAREARPDAFIIYKPHPDVES  541
             LP  +K+K +ILVPGQVEDDAS++ G  ++ +NL+LLR+ RE  P+A+I+YKPHPDV  
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  542  GNRQGALPDTTTLHYADSILHDFPMGSLLPLVNEVHTLTSQTGFEALLRGVKVCTYGGPF  601
            GNR+G +P   T + AD    D  +   +   +EVHT+TS +GFEALL+G  V  YG PF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  602  YAGWGLTEDNRTFPRRKARLNLNELVAGALLLYPSY  637
            YAGWGLT D++  PRR  +L L +L+  AL++YP+Y
Sbjct  588  YAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  144 bits (528),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 107/292 (37%), Positives = 173/292 (60%), Gaps = 6/292 (2%)

Query  36   CTIQRNTVLGWGHKPTADKARRYAAEHN-LPYIAVEDGFLRSLDLGCRGAQPLSLVVDHT  94
            CT     V+ WG K  +++ +R  A+++ LP   +EDGFLRS +LG     PLSLV+D  
Sbjct  361  CTAASACVV-WGVK--GEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKR  417

Query  95   GIYYDASGPSDLEDFLNSSGWETPELMDSARLAMREIIRHSLSKYNHAPESSESVWGDGL  154
            GIYYDA+ PSDLE +LN S    ++ M + +L  R ++   LSKYN +++ S +  + + 
Sbjct  418  GIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQR-LVESKLSKYNLGADFSLPAKAKD-  475

Query  155  APRVLVLDQTVGDASVTLGMADEECFHAMLEKALTVHPHSHVCVKTHPDVIAGKKKGYLT  214
               +LV +Q  +DAS+  G         +L      +PH+ +  K HPDV+ G++KG + 
Sbjct  476  KKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIP  535

Query  215  EYATKHGVKILAVEHAPLSLLSRADVVYTVTSQMGFEALMLDKEVHCFGMPFYAGWGLTN  274
               T +     A++   +  + RAD V T+TS  GFEAL+ +K+VHC+G+PFYAGWGLT 
Sbjct  536  AELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTV  595

Query  275  DMKTCSRRKRQRSLEEVFTAAYLLYARYVNPIRSERCDIHDTISLLTEQRRQ  326
            D   C+RR R+ +L +++  A ++Y+ Y++P R +   ++++   L +  R+
Sbjct  596  DEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRK  647

73) Meso_2755 in NC_008254


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  352 bits (1322),  Expect = 5e-98, Method: Compositional matrix adjust.
 Identities = 272/611 (45%), Positives = 397/611 (65%), Gaps = 26/611 (4%)

Query  32   SAVVGWGRKPSGHRAIALASKRKLPFLLLEDGFLRSVE---RSGPPLSLIVDDIGIYYDA  88
            +A+  WG++PS+ +++A+A     P + LEDGF+RS++    + PPLSL+VDD GIYYDA
Sbjct  37   NAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDA  96

Query  89   SAPSRLETLVREPLSEEQ-VRRTLLLMRAWRDGHISKYNHARDY--DGPLPSRFVLVVDQ  145
            S PS LE LV++  ++   + ++   M++   G++SKYN A  +  D +  + +VLVVDQ
Sbjct  97   SKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQ  156

Query  146  TFGDASVRHGLADASSFQGMLQAALDENPECSVLVKSHPDVVRRRKRGYFEPRKLADHPR  205
            TF D SV  G A++  F +ML+AA+ ENP+  + VK HPDV+  +K GYF    L    R
Sbjct  157  TFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFA--DLRATQR  214

Query  206  VKFILDDCRPARLLEQAEAVYTVTSQLGFEALIWGKRVRCFGMPFYAGWGLTDDALAAPA  265
            V++I ++  P  LL +   VY VTSQ GFEAL+ GK V CFG P YA+WGLTDD  + +A
Sbjct  215  VRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSA  274

Query  266  ----RRKSATLEQLVHASLVRYPRYRDLHGETPADVEAVIEHVTLQTRMRARFSPELHAL  321
                RR SATLE+L  A+ +RY RY D +    +D+ +V++ + LQ R   + +  L A 
Sbjct  275  LLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAP  334

Query  322  GFSWWKAPILKRFL--AGSKLNFVGRMSAVPPNATVALWGARHIGE--TPPGTKII---R  374
            G++ WK++ILK FL  + ++L+F  R     + ++  +WG +   +  + +  K +   R
Sbjct  335  GLTLWKSAILKPFLRTPTNRLSFSRR---CTAASACVVWGVKGEQQWRAEAQRKSLPLWR  391

Query  375  IEDGFLRSVGLGSELSRPVSWICDEEGIYYDASRPSRLERILSDTDFDQLLLDRAGKLRQ  434
            +EDGFLRS GLGS+L  P+S + D  GIYYDA+RPS LE +L+++++      RA KLRQ
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  435  AILRARLTKYNLGap-rwvrparavrvILVPGQVESDASLRFGAPGIKTNLELLKAVRQA  493
             ++ ++L+KYNLGA       A+  +VILVPGQVE DAS++ G+ +IK+NLELL++VR+ 
Sbjct  452  RLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRER  511

Query  494  NPDAYVVYKPHPDVAAGVRHQ--PGNTRWSDLCDEVVVTADMAQLLEEVDEVHTLTSLTG  551
            NP+AY+VYKPHPDV  G R    P++   ++L D   + AD+ Q ++  DEVHT+TSL+G
Sbjct  512  NPHAYIVYKPHPDVLVGNRKGDIPAELT-AELADYQALDADIIQCIQRADEVHTMTSLSG  570

Query  552  FEALLRELPVTCYGQPFYAGWGLSCDMIPIERRKRRLSLDELVAGSLILYPTYHSRSSAG  611
            FEALL+   V CYG PFYAGWGL+ D     RR R+L+L +L+  +LI+YPTY   +   
Sbjct  571  FEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQ  630

Query  612  FITPEQAVAEL  622
             IT E+A   L
Sbjct  631  PITVEEAAEYL  641


 Score =  127 bits (465),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 105/294 (36%), Positives = 171/294 (59%), Gaps = 17/294 (5%)

Query  31   GSAVVGWGRKPSGHRAIALASKRKLPFLLLEDGFLRSVERSG---PPLSLIVDDIGIYYD  87
            +SA V WG K   ++    A ++ LP+  +EDGFLRS   ++   PPLSL++D  GIYYD
Sbjct  364  ASACVVWGVKGEQQWRAE-AQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYD  422

Query  88   ASAPSRLETLVREP-LSEEQVRRTLLLMRAWRDGHISKYNHARDYDGPLPSR---FVLVV  143
            A+ PS LE L+ ++ L+  Q  R+  L +   ++ +SKYN + D+  P  ++    +LV 
Sbjct  423  ATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVP  482

Query  144  DQTFGDASVRHGLADASSFQGMLQAALDENPECSVLVKSHPDVVRRRKRGYFEPR---KL  200
            +Q  +DAS++ G     S   +L++  + NP+  ++ K+HPDV+   ++G + +     L
Sbjct  483  GQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAEL  542

Query  201  ADHPRVKFILDDCRPARLLEQAEAVYTVTSQLGFEALIWGKRVRCFGMPFYAGWGLTDDA  260
            AD   +   + +C     +++A+ V T+TS  GFEAL+ GK+V+C+G+PFYAGWGLT D 
Sbjct  543  ADYQALDADIIQC-----IQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDE  597

Query  261  LAAPARRKSATLEQLVHASLVRYPRYRDLHGETPADVEAVIEHVTLQTRMRARF  314
               P R +  TL +L+  +L+ YP Y +     P  VE   E + +QT  ++ F
Sbjct  598  HRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYL-IQTPRKPMF  650


 Score =  117 bits (426),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 103/296 (35%), Positives = 168/296 (57%), Gaps = 23/296 (7%)

Query  326  WKAPILKRFLAGS--KLNFVGRMSAVPPN-ATVALWGARHIGETP------PGTKIIRIE  376
            W+ P L +FLA +  KL++   + +VP +  ++A+WG R  +  P      +G  +IR+E
Sbjct  10   WRIPHLEKFLAQPCQKLSL---LRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLE  66

Query  377  DGFLRSVGLGSELSRPVSWICDEEGIYYDASRPSRLERILSDTDFDQLLLDRAGKLRQAI  436
            DGF+RS++LG +   P+S + D+ GIYYDAS+PS LE+++ D   +  L+ +A    ++I
Sbjct  67   DGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTI  126

Query  437  LRARLTKYNLGaprwvrparavrvILVPGQVESDASLRFGAPGIKTNLELLKAVRQANPD  496
            + + ++KYNL+++     +    ++LV +Q  +D S+ +G +G      +L A    NP+
Sbjct  127  VTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQ  186

Query  497  AYVVYKPHPDVAAGVRH----QPGNTRWSDLCDEVVVTADMAQLLEEVDEVHTLTSLTGF  552
            A +  K HPDV  G +     +   T++  L  E V       LL +V  V  +TS  GF
Sbjct  187  AEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQS---LLRHVSRVYVVTSQYGF  243

Query  553  EALLRELPVTCYGQPFYAGWGLSCDMIP----IERRKRRLSLDELVAGSLILYPTY  604
            EALL   PVTC+GQP YA+WGL+ D  P    +  R+   +L+EL A++ + Y  Y
Sbjct  244  EALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRY  299

74) TKWG_23315 in NC_017964


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  350 bits (1313),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 260/620 (42%), Positives = 404/620 (66%), Gaps = 22/620 (3%)

Query  24   GLWRNRTLPAFLDAP-LKISWLGTANKAVRL--GWGRKNsglraarlaasaggrFCLLED  80
            G+WR   L  FL  P  K+S L    + V     WG++ S+ ++  +A +AG     LED
Sbjct  8    GIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLED  67

Query  81   GFLRSVGLGVD-EPPLSVVFDHQGIYYDAGSPSWLEHLAAQPLDPAA-TARAQALISLWR  138
            GF+RS++LGV+ EPPLS+V D+ GIYYDA+ PS LE L  +  + +A  ++A+  +    
Sbjct  68   GFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIV  127

Query  139  QNRVSKYNHLPEFAGSLPAR--YVLLADQTFGDASLRYGQASPEDFTVMLDCALRQHADC  196
               +SKYN  P F +  + R   VL+ DQTF D S+ YG+A+P++F+ ML+ A+ ++++ 
Sbjct  128  TGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQA  187

Query  197  DVLIKIHPDVFAGHKKGHFDLAELQNNPRVRILVDNVHPVRLIEQAQAVYTVTSQVGFEA  256
            ++ +K+HPDV+ G K G F  A+L+   RVR++ +NV P  L+ +   VY VTSQ GFEA
Sbjct  188  EIWVKVHPDVLEGKKTGYF--ADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEA  245

Query  257  LLWGKPVFTFGMPFYAGYGLTTDAQAAPV----RRQPASLEQLVHAALVRYARYLDPETG  312
            LL GKPV  FG P YA+ GLT D ++ +     RR +A+LE+L  AA +RY RY+DP+TG
Sbjct  246  LLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTG  305

Query  313  TRCEPERLIEWMGLQRRMRNRFASPVYAPNFSRWKKPIVQRFFQGSEVRFLEKASDFPGE  372
               +   +++W+ LQRR  ++  + + AP ++ WK +I++ F++ +  R L  +    + 
Sbjct  306  EVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR-LSFSRRCTAA  364

Query  373  GTLAVWGRPADV---TQFARQRVFL---EDGFLRSVGLGADLVQPLSWVIDRTGIYYDSS  426
            ++  VWG  ++    ++  R+ + L   EDGFLRS GLG+DL+ PLS V+D+ GIYYD++
Sbjct  365  SACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDAT  424

Query  427  RASDLETILRTAVFDDTLRGRAAALRERIVAANLTKYNVGSG-RWQRPAGITRVILVPGQ  485
            R+SDLE +L  + +  + + RA  LR+R+V ++L+KYN+G++      A   +VILVPGQ
Sbjct  425  RPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQ  484

Query  486  VETDASIKYGS-PVRRNMDLLKAVRNANPDAYVVYKPHPDVVAGLRDAGQNEQQALDWCN  544
            VE DASIK G+ +++ N++LL++VR+ NP+AY+VYKPHPDV+ G R ++   + + +  +
Sbjct  485  VEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELAD  544

Query  545  EVVVDYPIGELFASVDEVHVLTSLAGFEALLRGRKVVTFGQPFYAGWGLTDDKNPVARRD  604
               +D  I + +   DEVH +TSL+GFEALL+G+ V  +G PFYAGWGLT D +  +RR+
Sbjct  545  YQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRE  604

Query  605  RTLSLDELVAGVLILYPCYV  624
            R L+L +L+   LI+YP Y+
Sbjct  605  RKLTLADLIYQALIVYPTYI  624

75) VEA_001778 in NC_013456


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  349 bits (1309),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 269/645 (42%), Positives = 398/645 (62%), Gaps = 36/645 (5%)

Query  5    VVVLSRGIIRISNLTSFLGS---KLVL--PIFRWLYSCNVVVGWGFKATAKRARDYAEKH  59
            + + S GI RI++L  FL+    KL L  P+ +     N +  WG +++A ++   A   
Sbjct  2    IGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQ---EVNAIAVWGHRPSAAKPVAIAKAA  58

Query  60   DLTYVALEDGFLRSIGLGVAGAQPLSLVVDDVGIYYDARQPSKLEILIKESEGLGSDELV  119
            +   + LEDGF+RS++LGV G  PLSLVVDD GIYYDA +PS LE L+++  G  +  + 
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAG-NTALIS  117

Query  120  RSRLCIDAIRQYRLSKYNQSQR---DESLLEEKPKVLVIDQTMGDASVEGAQASQDTFVE  176
            ++R  +++I    +SKYN +     DES  E    VLV+DQT  D SV  ++A+ + F  
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADES--ERTNIVLVVDQTFNDMSVTYGNAGPHEFAA  175

Query  177  MLKHAVEANPDETIWVKVHPDVVHGKKRGFLYPLPFEHPNIRLHTEKVNPWDFLDSVESV  236
            ML  A+  NP+  IWVKVHPDV++GKK G++  L      +RL +E+V+P  +L  V  V
Sbjct  176  MLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLR-ATQRVRLIAENVSPQSLLRHVSRV  234

Query  237  YTVSSLMGFEALLAGASVHCFGMPFYAGWGLTHDIQQ-----CPRRNIDRSLEQLFYAAY  291
            Y V+S  GFEALLAG +V CFG P YA+WGLT+D +       +RR    +LE+LF AAY
Sbjct  235  YVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAY  293

Query  292  IQYARYVDPILGERCEIERIISYIADTLKVMAKPSRTVSISNLSWWKQRWIGDYLKA---  348
            ++Y RY+DP  GE  ++  ++  +    + + + +  +  + L+ WK   +  +L++   
Sbjct  294  LRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTN  353

Query  349  -WRFEKVSSEAEEMLRWG-------RGSLDENSYCI---EDGFIRSVGLGVHFNRPVSLV  397
               F +  + A   + WG       R+  + +S  +   EDGF+RS GLG ++  P+SLV
Sbjct  354  RLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLV  413

Query  398  CDSRGIYFDVREPSDLEYMLENQDCTAWDCARSRALIAQLLTANLTKYNVGSECALSL-P  456
             D RGIY+D   PSDLE +L++ + T  +  R+  L  +L+ ++L+KYN+G++ +L+  +
Sbjct  414  LDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKA  473

Query  457  KGRKIILVPGQVESDASIKYGSPETYHNEALLKAVRTAEPDAYIIYKPHPDVLVGQRDNG  516
            K++K+ILVPGQVE DASIK G+     N  LL++VR  +P+AYI+YKPHPDVLVG+R  +
Sbjct  474  KDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGD  533

Query  517  NWQGDFIHVADHVEPQASMASLLEIVDEVHTMTSLTGFEALLRGKSVTCYGLPFYAGWGL  576
                   ++AD    +A +   ++  DEVHTMTSL+GFEALL+GK V CYGLPFYAGWGL
Sbjct  534  IPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGL  593

Query  577  TNDKLNCARRTRSHSVESLAYFALIEYPTYVDPVTRQTMTAEQAV  621
            T D   C+RR R  ++  L Y ALI YPTY++P   Q +T E+A 
Sbjct  594  TVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAA  638


 Score =  143 bits (526),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 106/285 (38%), Positives = 173/285 (61%), Gaps = 15/285 (5%)

Query  41   VGWGFKATAKRARDYAEKHDLTYVALEDGFLRSIGLGVAGAQPLSLVVDDVGIYYDARQP  100
            V WG K+  ++ R  A++  L    +EDGFLRS GLG     PLSLV+D  GIYYDA +P
Sbjct  368  VVWGVKGEQQW-RAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRP  426

Query  101  SKLEILIKESE-GLGSD---ELVRSRLCIDAIRQYRL-SKYNQSQRDESLLEEKPKVLVI  155
            S LE+L+++S+  L+ +   E +R RL    + +Y L + ++ + +      +K  +LV 
Sbjct  427  SDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAK----DKKVILVP  482

Query  156  DQTMGDASVEGAQASQDTFVEMLKHAVEANPDETIWVKVHPDVVHGKKRG-FLYPLPFEH  214
            +Q  +DAS+  +  S  + +E+L+   E NP+  I  K HPDV+ G+++G +   L  E 
Sbjct  483  GQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAEL  542

Query  215  PNIR-LHTEKVNPWDFLDSVESVYTVSSLMGFEALLAGASVHCFGMPFYAGWGLTHDIQQ  273
            ++ + L+++ ++    ++  + V T++SL GFEALL G  VHC+G+PFYAGWGLT D ++
Sbjct  543  ADYQALDADIIQC---IQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHR  599

Query  274  CPRRNIDRSLEQLFYAAYIQYARYVDPILGERCEIERIISYIADT  318
            CPRR+   +L +L+Y A I Y+ Y++P   +   +E    Y+ +T
Sbjct  600  CPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQT  644

76) GU3_14830 in NC_016745


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  348 bits (1307),  Expect = 7e-97, Method: Compositional matrix adjust.
 Identities = 266/615 (44%), Positives = 398/615 (65%), Gaps = 34/615 (5%)

Query  4    NNATAVVGWGMKPNTERARRLAARKDLPFWQLEDGFVGYIGHPATRATRLSLIVDEVGVY  63
            ++  A+  WG +P++ ++  +A   + P  +LEDGFV  ++        LSL+VD+ G+Y
Sbjct  34   QEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIY  93

Query  64   YDATRPSRLEQLLQNIDWWNDDWQQRADALRRILVDQGITKYNCYSGNVLPAAIAARLDN  123
            YDA++PS LE+L+Q+         Q  +A++ I+ ++ ++KYN      L++A+ A   +
Sbjct  94   YDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGD-MSKYN------LAPAFVADESE  146

Query  124  TRPRVLVIDQTKGDQSVRLGLASEASFTNMLAAAKAENPDAQIIVRTHPDVLLGKKQGYL  183
                VLV+DQT  D SV  G A+   F+ ML AA AENP+A+I V+ HPDVL GKK GY+
Sbjct  147  RTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYF  206

Query  184  TDVAGSD-VLLLADSVNPFALMAEMDKVYTVTSQLGFEALLAGKPVVCFGAPFYAGWGVT  242
            +D+ +++ V L+A++V+P +L+ ++ +VY VTSQ GFEALLAGKPV CFG P YA+WG+T
Sbjct  207  ADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLT  266

Query  243  DDR-----LAVLRRGEQRTVPQLLAAAYLRYCRYLDPVTGERCELEDLLD-LILAQRSPV  296
            DDR     L   RRG   T+ +L+AAAYLRYCRY+DP TGE  +L  +L+ L L +R   
Sbjct  267  DDRHPQSALLSARRGSA-TLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQ  325

Query  297  PPVDTLYAVGFSLWrrrfaprflrrYAKKVIFVDRMPDAMDSRLRGNDTSPSRAVLVWGR  356
               + L A G++LW+  +   FLR  ++++ F  R              +++ A +VWG 
Sbjct  326  QRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR-------------CTAASACVVWGV  372

Query  357  KFE----SQLAGCSLPVWRMEDGFLRSVGLGSDLRRPGSLVIDPLGMYYDPRTPSAIEHY  412
            K E    ++    SLP+WRMEDGFLRS GLGSDL  P SLV+D  G+YYD+  PS +E  
Sbjct  373  KGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVL  432

Query  413  LKHHDFSALELELGEQLLTHFREQALTKYNVGVRRQLDWRAQASHRPVILVPGQVDDDAS  472
            L+H +++  +   +E+L  ++ E  L+KYN+G   ++   A+A ++ VILVPGQV+DDAS
Sbjct  433  LNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGA--DFSLPAKAKDKKVILVPGQVEDDAS  490

Query  473  VQLGSPFVAGNAALLQAVRAAHPNAFIVFKPHPDVVSGNRKGQVPEKVLKACVDLVETEA  532
            ++ G+  + +N  LL++VR  +P+A+IV+KPHPDV+ GNRKG++P  +     D    +A
Sbjct  491  IKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDA  550

Query  533  GIVDCLDECDAVHTLTSLTGLEALIRGKPVTVWGQPFYAGWGLTTNVHPVTRRARTLPLA  592
            +I++C++  D VHT+TSL+G+EAL++GK V   G PFYAGWGLT + H   RR R L LA
Sbjct  551  DIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLA  610

Query  593  ALVYATYAWYPTYVD  607
             L+Y +   YPTY++
Sbjct  611  DLIYQALIVYPTYIH  625


 Score =  130 bits (475),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 110/298 (37%), Positives = 175/298 (59%), Gaps = 15/298 (5%)

Query  4    NNATAVVGWGMKPNTERARRLAARKDLPFWQLEDGFVGYIGHPATRATRLSLIVDEVGVY  63
              A+A V WG+K + ++ R  A RK LP+W++EDGF+   G  +     LSL++D  G+Y
Sbjct  362  TAASACVVWGVKGEQQW-RAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  64   YDATRPSRLEQLLQNIDWWNDDWQQRADALRRILVDQGITKYNCYSGNVLPAAIAARLDN  123
            YDATRPS LE LL++ +    + Q RA+ LR+ LV+  ++KYN  ++  LPA       +
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQ-QMRAEKLRQRLVESKLSKYNLGADFSLPAK-----AK  474

Query  124  TRPRVLVIDQTKGDQSVRLGLASEASFTNMLAAAKAENPDAQIIVRTHPDVLLGKKQGYL  183
             +  +LV +Q  +D S++ G  S  S  ++L + +  NP+A I+ + HPDVL+G+++G  
Sbjct  475  DKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKG--  532

Query  184  TDVAGSDVLLLAD----SVNPFALMAEMDKVYTVTSQLGFEALLAGKPVVCFGAPFYAGW  239
             D+++     LAD      + +  +   D V T+TS  GFEALL GK V C+G PFYAGW
Sbjct  533  -DIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGW  591

Query  240  GVTDDRLAVLRRGEQRTVPQLLAAAYLRYCRYLDPVTGERCELEDLLD-LILAQRSPV  296
            G+T D     RR  + T+++L+  A + Y  Y++P   +   +E+  + LI + R P+
Sbjct  592  GLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPM  649


 Score = 87.8 bits (314),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 95/296 (33%), Positives = 166/296 (57%), Gaps = 18/296 (6%)

Query  350  AVLVWGRKFESQLA-----GCSLPVWRMEDGFLRSVGLGSDLRRPGSLVIDPLGMYYDPR  404
            A+ VWG++  +  +     + + PV R+EDGF+RS++LG +   P SLV+D  G+YYD+ 
Sbjct  38   AIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDAS  97

Query  405  TPSAIEHYLKHHDFSALELELGEQLLTHFREQALTKYNVGVRRQLDWRAQASHRPVILVP  464
             PSA+E  +++   ++  +  + + +  +    ++KYN++     D   ++ +  ++LV 
Sbjct  98   KPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVAD---ESERTNIVLVV  154

Query  465  GQVDDDASVQLGSPFVAGNAALLQAVRAAHPNAFIVFKPHPDVVSGNRKGQVPEKVLKAC  524
            +Q  +D SV  G++     AA+L+A  A +P+A I  K HPDV+ G++ G  ++      
Sbjct  155  DQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQR  214

Query  525  VDLVETEAGIVDCLDECDAVHTLTSLTGLEALIRGKPVTVWGQPFYAGWGLTTNVHP---  581
            V L+  + +    L +   V  +TS  G+EAL+ GKPVT  GQP YA+WGLT + HP   
Sbjct  215  VRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSA  274

Query  582  -VTRRARTLPLAALVYATYAWYPTYVDYDSGLCSTP------LRMARQLAQERKAY  630
             ++ R  +  L  L  A+Y +Y  Y+D ++G  S        L++ R+  Q+R++Y
Sbjct  275  LLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGY  330

77) CtCNB1_2753 in NC_013446


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  339 bits (1272),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 257/583 (45%), Positives = 387/583 (67%), Gaps = 20/583 (3%)

Query  1    MPYVALEDGFLRSFGTGEHF-PPLSLVVDDAGIYYDCTRPSALEQllssdadvlapdaal  59
             P + LEDGF+RS++ G +  PPLSLVVDD GIYYD ++PSALE+L+   A+  A  +  
Sbjct  60   KPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQA  119

Query  60   vRQAREKLLSAGLSKYNHAPDLPAGVLRADDVQRVLVVDQTAGDMSVAKGGadaatfgam  119
             R+A + ++++++SKYN AP + A+   ++  + VLVVDQT  DMSV+ G A++  F+AM
Sbjct  120  -REAMHTIVTGDMSKYNLAPAFVAD--ESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAM  176

Query  120  laaaLDENPQATVYVKTHPEVTSGRKGGYLTRVQPDARTVVLRDAVNPMSLIAQMDKVYV  179
            L AA+ ENPQA + VK HP+V  G+K GY++ +++  R  ++ + V+P SL+ ++ +VYV
Sbjct  177  LEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYV  236

Query  180  VSSTMGFEALLASKPVVCFGVPWYAGWGVTDDRQPQHaamgrragrsrsVDELFAAGYMH  239
            V+S  GFEALLA+KPV CFG PWYA+WG+TDDR+PQ +A+      S +++ELFAA+Y++
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQ-SALLSARRGSATLEELFAAAYLR  295

Query  240  YTRYLNPETRQLGSIADVTVWLDRQREMAERYSGRMICVGFPRWRAWNFRQMLSLHAKRV  299
            Y RY++P+T +++ +  V  WL+ QR   ++ +G +   G+  W++  ++  L   ++R+
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRL  355

Query  300  VHarsadaaaaLKPERDDCLVCWGRVPPEGVQELAAASGVRLLRMEDGFVRSVGLGSDLI  359
              +R              C+V WG    +  +  A   ++ L RMEDGF+RS GLGSDL+
Sbjct  356  SFSRRC-------TAASACVV-WGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLL  407

Query  360  PPQSFVLDAQGIYFDPGQPSELEDLLNTRTFTAQDLERARNVRAFIVEHGITKYNLEPNC  419
            PP S+VLD +GIY+D+ +PS+LE LLN   +T  +  RA ++R  +VE  ++KYNL ++ 
Sbjct  408  PPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGAD-  466

Query  420  PVDWFSDEHPQAGRQVVLVPGQVEDDASIRFGCDAKGVCTNLGLLQAARSAFPDAFIVFK  479
                FS      +++V+LVPGQVEDDASI+ G  + ++ +NL LL++ R   P+A+IV+K
Sbjct  467  ----FSLPAKAKDKKVILVPGQVEDDASIKTG--TVSIKSNLELLRTVRERNPHAYIVYK  520

Query  480  PHPDVSSGNRKGRVEPAQALLYADHMEQGASVVSCIEACDVVVTMTSLTGFDALLRNKQV  539
            PHPDV  GNRKG + +  +   AD    +A ++ CI+  D V TMTSL+GF+ALL+ K+V
Sbjct  521  PHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHV  580

Query  540  VVHGRPFYAGWGLTQDCLPVPRRSRSLSLDELVAGALLHYPLY  582
               G PFYAGWGLT D    PRR R L+L +L+  AL+ YP Y
Sbjct  581  HCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  100 bits (362),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 98/305 (33%), Positives = 170/305 (56%), Gaps = 13/305 (4%)

Query  313  PERDDCLVCWGRVPPEGVQ-ELAAASGVRLLRMEDGFVRSVGLGSDLIPPQSFVLDAQGI  371
            P+  + +  WG+ P+ +    +A A+G  ++R+EDGFVRS++LG +  PP S+V+D  GI
Sbjct  33   PQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGI  92

Query  372  YFDPGQPSELEDLLNTRTFTAQDLERARNVRAFIVEHGITKYNLEPNCPVDWFSDEHPQA  431
            Y+D+++PS LE L++ ++  +  + +AR+    IV  +++KYNL P      F  ++++ 
Sbjct  93   YYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPA-----FVADESER  147

Query  432  GRQVVLVPGQVEDDASIRFGCDAKGVCTNLGLLQAARSAFPDAFIVFKPHPDVSSGNRKG  491
              ++VLV +Q  +D S+ +G  +    + +     A ++ ++  +  K HPDV  G++ G
Sbjct  148  T-NIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWV--KVHPDVLEGKKTG  204

Query  492  RVEPAQALLYADHMEQGASVVSCIEACDVVVTMTSLTGFDALLRNKQVVVHGRPFYAGWG  551
                 +A      + +  S  S +     V  +TS  GF+ALL  K V   G+P YA+WG
Sbjct  205  YFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWG  264

Query  552  LTQDCLP----VPRRSRSLSLDELVAGALLHYPLYWDPVLRGYTSCEAVLRRLLEQRTAL  607
            LT+D  P    ++ R  S +L+EL A+A L+Y  Y DP     +   +VL++L  QR  L
Sbjct  265  LTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHL  324

Query  608  EQSGS  612
            +Q  +
Sbjct  325  QQRNG  329

78) Tgr7_1314 in NC_011901


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  338 bits (1267),  Expect = 9e-94, Method: Compositional matrix adjust.
 Identities = 273/592 (47%), Positives = 391/592 (67%), Gaps = 15/592 (2%)

Query  14   WGAKPSARWAQIYARLSGGRPLLLEDGFLRSYGLGVHGVPALSIVVDDLGIYFDARKPSR  73
            WG +PSA  +   A+ +G   + LEDGF+RS +LGV+G P+LS+VVDD GIY+DA KPS 
Sbjct  42   WGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSA  101

Query  74   IEQLLQDGVFSPEIlqqaeaalallqrerlTKYNVGTEVPDDHFAPDVRRVLVVDQTLGD  133
            +E+L+QD   +  ++ QA  A+  +    ++KYN++     D+ +     VLVVDQT+ D
Sbjct  102  LEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADE-SERTNIVLVVDQTFND  160

Query  134  ASITGGLADEASFLRMLDAAVAENPGAEVWVKTHPDVLAGKRASCLSAARGRSDVRWITQ  193
             S+T G A+   F  ML+AA+AENP AE+WVK HPDVL GK+++ ++  R+   VR I++
Sbjct  161  MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAE  220

Query  194  DWHPHSLLAHFERVYVVTSQMGLDALIVGRPVTCFGVPFYSGWGLTDDRVP-----CERR  248
            +  P+SLL H  RVYVVTSQ G++AL+ G+PVTCFG P Y++WGLTDDR P       RR
Sbjct  221  NVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARR  280

Query  249  AARRSLVEliaaayllyarylDPETGKPGNFFQVADFIvrqrrvqarwprrFVAVGFRAW  308
            ++  +L EL+AAAYL Y RY+DP+TG  +++F V + +  QRR   ++   + A G+  W
Sbjct  281  GSA-TLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLW  339

Query  309  KAAHLTPILGMAREGVRFVRDAEAARALGLRKDDGLIHWGRDAPQRVEELARATSTRLFH  368
            K+A L P+L  + + + F R   AA A  ++   G  +W R  +QR        S  L +
Sbjct  340  KSAILKPFLRTPTNRLSFSRRCTAASACVVWGVKGEQQW-RAEAQR-------KSLPLWR  391

Query  369  LEDGFYRSVGLGSDLIRPRSVVIDEQGLYFDPRGPSDLEQLLNTAAFSPDELEQARWVRS  428
            +EDGF RS GLGSDL+ P S+V+D +G+Y+D+  PSDLE LLN + ++  +  +A  +R 
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  429  LIVEHGLTKYNLEPLVPVDWPAAGRTVVLVPGQVEDDASIRHGCESVRTNLDLMQVARET  488
             +VE  L+KYNL +  ++   A ++ V+LVPGQVEDDASI+ G  S+++NL+L++  RE 
Sbjct  452  RLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRER  511

Query  489  CPDAFIVFKPHPDVASGNRHGAVQDDEALRHVDWVERKASMVSCLDGADAVHTMTSMAGF  548
             P+A+IV+KPHPDV  GNR G +  + +    D     A ++ C++ AD VHTMTS++GF
Sbjct  512  NPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGF  571

Query  549  EALLRGKRVVVYGRPFYAGWGLTEDRLSIPRRTRKLTLDELVAVALLRYPLY  600
            EALL+GK+V  YG PFYAGWGLT D    PRR RKLTL +L+  AL+ YP Y
Sbjct  572  EALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  106 bits (387),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 100/298 (34%), Positives = 166/298 (56%), Gaps = 13/298 (4%)

Query  308  WKAAHLTPILGMAREGVRFVRDAEAARALGLRKDDGLIHWG-RDAPQRVEELARATSTRL  366
            W+ +HL  +L+ + + + ++R          +  +++  WG R ++ +   +A+A++  +
Sbjct  10   WRIPHLEKFLAQPCQKLSLLRPVP-------QEVNAIAVWGHRPSAAKPVAIAKAAGKPV  62

Query  367  FHLEDGFYRSVGLGSDLIRPRSVVIDEQGLYFDPRGPSDLEQLLNTAAFSPDELEQARWV  426
            ++LEDGF RS++LG +   P S+V+D+ G+Y+D+  PS LE+L++  A +   + QAR  
Sbjct  63   IRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREA  122

Query  427  RSLIVEHGLTKYNLEPLVPVDWPAAGRTVVLVPGQVEDDASIRHGCESVRTNLDLMQVAR  486
               IV  +++KYNL P    D  +    +VLV +Q  +D S+  G  + +    +++ A 
Sbjct  123  MHTIVTGDMSKYNLAPAFVAD-ESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  487  ETCPDAFIVFKPHPDVASGNRHGAVQDDEALRHVDWVERKASMVSCLDGADAVHTMTSMA  546
               P+A I  K HPDV  G++ G   D  A ++V  +  + S  S L     V  +TS  
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQY  241

Query  547  GFEALLRGKRVVVYGRPFYAGWGLTEDRLS----IPRRTRKLTLDELVAVALLRYPLY  600
            GFEALL GK V  +G+P YA+WGLT+DR +    ++ R    TL+EL A A LRY  Y
Sbjct  242  GFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRY  299

79) Bresu_2762 in NC_014375


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  335 bits (1258),  Expect = 6e-93, Method: Compositional matrix adjust.
 Identities = 268/657 (41%), Positives = 410/657 (63%), Gaps = 25/657 (3%)

Query  11   VCSPGIWDVRFLKTFLDDLSLRASPLAPV----EAIVGWGLKPSSRSGRKRAARTGLPYL  66
            + SPGIW +  L  FL +   + S L PV    +AI  WG +PS+      A  +G P +
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  67   ALEDGFLRSIGLGETGAASVSLIVDDLGIYYDATRPSRLERWIETAPDWCDAAMRTRARA  126
             LEDGF+RS++LG  G +++SL+VDD GIYYDA++PS LE+ ++  ++  ++A+ ++AR 
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAG--NTALISQARE  121

Query  127  LIDRIVETGISKTNMGGPLDRAILQDRPRILLVDQTAGDASIACGLAGPHSFATMVATAK  186
             ++ IV  ++SK N++ ++     +    +L+VDQT  D S++ G AGPH FA+M+ +A 
Sbjct  122  AMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  187  AEHPEAQLIVKRHPAVAAGRKKGCIAEADLTGTT-LLDADVSPADLLDEVDQVWCVTSAL  245
            AE+P+A++ VK HP V  G+K G +A+   T    L+  +VSP  LL +V +V  VTS  
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQY  241

Query  246  GFEAVMRGLPVRCFGAAFYSGWGLTTD-----EVVTGRRGVARDIETVVAAAMIQYTRYV  300
            GFEA++ G PV CFG + Y++WGLT D      ++++RRG A  +E + AAA ++Y RY+
Sbjct  242  GFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLRYCRYI  300

Query  301  DPVTGRRCEVETALERLVALRGRAERLAGY-WAGVGFSPAKRPPIRRLLNGPRTRLRYFG  359
            DP TG   ++ T L++L   R + ++  GY WA  G++  K + ++ +L  P  RL +  
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAP-GLTLWKSAILKPFLRTPTNRLSF--  357

Query  360  NPATAERKAQAKSGRLIYWAGKEtpaiaamaaatvvpvvRMEDGFIRSRGLGSDFFGALS  419
                  R+  A S+ ++ W+ K      A A    +P+ RMEDGF+RS GLGSD++ +LS
Sbjct  358  -----SRRCTAASACVV-WGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLS  411

Query  420  VALDDQGVYYDPTRPSRLETLIEEGRQDaatlaraarlrarVVEAGLSKYNLSGGTARPD  479
            + LD +G+YYD+TRPS LE L+++++   A   RA +LR R+VE+ LSKYNL+++ + P 
Sbjct  412  LVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA  471

Query  480  WPADRRKVLVVGQVENDKSILKGCGDIRTNSGLVAAARADFPDAFLIYRNHPDVMSGNRP  539
             + D++ +LV GQVE+D SI  G   I++N  L+ + R   P+A+++Y+ HPDV+ GNR 
Sbjct  472  KAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRK  531

Query  540  GMLDAS-AIEAVDATADGLDIVDCLDACDVLATLTSLSGFEALLRGKAVATYGRPFYGGW  598
            G + A  + E  D  A + DI++C++  D + T+TSLSGFEALL+GK V  YG PFY+GW
Sbjct  532  GDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGW  591

Query  599  GLTTDAMTFDRRTRRASLDALVAAALIDYPIYVTPVGW-PCEAEDLVEALIAARNDP  654
            GLT D     RR R+ +L  L+  ALI YP Y+ P    P   E+  E LI +   P
Sbjct  592  GLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKP  648

80) kpsC in NC_010530


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  333 bits (1251),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 273/634 (44%), Positives = 394/634 (63%), Gaps = 31/634 (4%)

Query  10   IGVLSHGIRRIEHLSAFLGGPVVPVHPLRGAAVPLSAVAAWGRRPAARKTQAFAQSRGIA  69
            IG+ S GI+RI HL  FL+ P   +  LR  +  ++A+A WG+RP+A K  A+A++ G +
Sbjct  2    IGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKP  61

Query  70   RFLCLEDGFLRSLYPGASSQTC-SLVVDDRGIYYDASEPSRLEALV-----STPLLPAER  123
              + LEDGF+RSL  G +++   SLVVDD GIYYDAS PS LE LV     +T+L++  R
Sbjct  62   -VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  124  ERARQLIERWRCTGISKYNYAPAPTSLPAQ--PYVLAVDQTANDASVQYGLADGDSFRRM  181
            E  + ++      ++SKYN APA  +  ++    VL VDQT ND SV YG A+ + F  M
Sbjct  121  EAMHTIVT----GDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAM  176

Query  182  LESALQTYPHCRIVVKEHPEVALGRKRGYLGRILEHGGYPRVERLQDDVHVVPLIRGACA  241
            LE+A+   P+  I VK HP+V  G+K GY++   +  +  RV  + ++V   +L+R    
Sbjct  177  LEAAMAENPQAEIWVKVHPDVLEGKKTGYFA---DLRATQRVRLIAENVSPQSLLRHVSR  233

Query  242  VFAVTSQVGFEALLHGKTVHTFGMPFYAGWGLTIDALPAPG----RRHPVAVEQLAFAAL  297
            V+ VTSQ GFEALL GK V  FG P YA+WGLT D  P ++    RR + ++E+L  AA 
Sbjct  234  VYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAY  293

Query  298  VRYTRYVQPHTGNRCEVEDAIDYLALQRRMSQQFPRQLHATGFSRWKRKILKDFLQGHEV  357
            +RY RY++P+TG+  ++   ++ L LQRR  QQ    L A G++ WK  ILK FL+    
Sbjct  294  LRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTN  353

Query  358  MFHRGLRSVPQGATLLRWGRSID-----ATSRPDLSVITVEDGFLRSVGLGAQLVRPLSW  412
             +  + R  + +A ++ WG   +      + R  L++  +EDGFLRS GLG++L+ PLS 
Sbjct  354  RLSFSRRCTAASACVV-WGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSL  412

Query  413  VFDGSGIYYDATGESDLERLLATTDFDVATLARAAQLRESIIHAGLTKYNVGSG-SWTRP  471
            V+D  GIYYDAT  SDLE LL  +++ +A   RA +LR+ ++++ L+KYN+G++ S    
Sbjct  413  VLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAK  472

Query  472  AGVGRVILAVGQVEADASLRFGAPGICTNRALLEAVRAEAPDAYLVYKPHPDVMTGLRGN  531
            A   +VIL  GQVE DAS++ G+ +I +N  LL +VR   P+AY+VYKPHPDV+ G R  
Sbjct  473  AKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKG  532

Query  532  REEEKGLAALCDELVPDCPMDRLIAAVDGVHVLTSLAGFEALLRGKPVTTHGAPFYAGWG  591
                   A L D    D  + + I   D VH +TSL+GFEALL+GK V   G PFYAGWG
Sbjct  533  DIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWG  592

Query  592  LT--DDRCAMTRRHRRLSVDMLVAGALILYPRYV  623
            LT  ++RC+  RR+R+L++  L+  ALI+YP Y+
Sbjct  593  LTVDEHRCP--RRERKLTLADLIYQALIVYPTYI  624


 Score =  120 bits (440),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 100/270 (38%), Positives = 159/270 (59%), Gaps = 16/270 (5%)

Query  74   LEDGFLRSLYPGASSQ---TCSLVVDDRGIYYDASEPSRLEALVSTPLLP-AERERARQL  129
            +EDGFLRS  +G +S+     SLV+D RGIYYDA+ PS LE L++ + L  A++ RA +L
Sbjct  392  MEDGFLRS--SGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKL  449

Query  130  IERWRCTGISKYNYAPA---PTSLPAQPYVLAVDQTANDASVQYGLADGDSFRRMLESAL  186
             +R   + +SKYN ++    P+    +  +L  +Q  +DAS++ G     S   +L +  
Sbjct  450  RQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVR  509

Query  187  QTYPHCRIVVKEHPEVALGRKRGYLGRIL--EHGGYPRVERLQDDVHVVPLIRGACAVFA  244
            +  PH  IV K HP+V +G ++G +   L  E ++Y  +     D +++  I+ A  V +
Sbjct  510  ERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQAL-----DADIIQCIQRADEVHT  564

Query  245  VTSQVGFEALLHGKTVHTFGMPFYAGWGLTIDALPAPGRRHPVAVEQLAFAALVRYTRYV  304
            +TS  GFEALLHGK VH +G+PFYAGWGLT+D    P R + +++ +L + AL+ Y  Y+
Sbjct  565  MTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYI  624

Query  305  QPHTGNRCEVEDAIDYLALQRRMSQQFPRQ  334
            +P   +   VE+A +YL    R +  + R+
Sbjct  625  HPTRLQPITVEEAAEYLIQTPRKPMFITRK  654

81) Bmul_2616 in NC_010084


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  333 bits (1249),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 266/631 (43%), Positives = 402/631 (64%), Gaps = 23/631 (3%)

Query  31   APGVNRIPTLAALLDD----FRLHYRPMGRPAEGAGVLAWGRRPSALAAQRYAAKHGLAV  86
            +PG+ RIP L  +L +    + L  RP+  P E  ++  WG+RPSA  +   A   G +V
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSLL-RPV--PQEVNAIAVWGHRPSAAKPVAIAKAAGKPV  62

Query  87   YHIEDGFLRSVGLG-KDDPPLAIIFDDTGLYLDASQPSRLESLIaqplrddq-aararal  144
             ++EDGF+RS++LG +++PPL+++ DD G+Y DAS+PS LE L+ +   +    ++AR  
Sbjct  63   IRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREA  122

Query  145  aqaWRDGRVSKYNHSRDL--ERALPDGCVLVVDQTRGDASISCGLADASSFQRMLDAALR  202
             ++   G +SKYN +  +  + +     VLVVDQT  D S++ G A++  F  ML+AA+ 
Sbjct  123  MHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMA  182

Query  203  DHPERTILLKVHPDVVSGRKQGHFDLDAVRAMPRVQVLDDDAHPASVLPLVHEVYTVTSQ  262
            ++P+  I +KVHPDV+ G+K G F    +RA  RV+++ ++  P S+L  V  VY VTSQ
Sbjct  183  ENPQAEIWVKVHPDVLEGKKTGYFA--DLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  263  LGFEALMWGLPVRVFGMPFYAGWGLTRDALPAPA----RRGAATLEQLVHAALIDYCRYV  318
             GFEAL+ G PV  FG P YA+WGLT D  P +A    RRG+ATLE+L  AA + YCRY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  319  DPETGKRCEVETVVAWLALQRRMRQRFTVDIDALGFSGWKKDYVRQFFDGSAVRFRWRVR  378
            DP+TG   ++ TV+ WL LQRR  Q+    + A G++ WK   ++ F+  ++ R+    R
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  379  RSSNASVATWGRKLDDRLAPALPATCKVI-RVEDGFIRSVGLGADLTRPLSWVQDDVGIY  437
             ++ ++   WG K +++  +        + R+EDGF+RS GLG+DL  PLS V D  GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  438  YDATRPSRLETLLADATFSDELVERAANLRRAICDAGITKYNLAGRANW-SRPQGRRVIL  496
            YDATRPS LE LL ++ ++     RA +LR+ + ++ ++KYNL++  +  +++++++VIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  497  VPGQVETDASIRFGASGIRSNMELLQAVRAANPDAYLLYKPHPDVMAGLRKVGRGEGDAA  556
            VPGQVE DASI+ G+ +I+SN+ELL++VR  NP+AY++YKPHPDV+ G RK +     +A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  557  QWCDETIGAVSFHELLGSVDEVHVLTSLAGFEALMRGVKVVTYGQPFYAGWGVTHDAGLT  616
            +  D       + + +   DEVH +TSL+GFEAL++G  V  YG PFYAGWG+T D    
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVD----  596

Query  617  DavrrrrarvLKLDELVAAALILYPTYVSRT  647
            +    RR R L L +L+  ALI+YPTY+  T
Sbjct  597  EHRCPRRERKLTLADLIYQALIVYPTYIHPT  627


 Score =  113 bits (412),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 101/295 (35%), Positives = 165/295 (56%), Gaps = 3/295 (1%)

Query  357  WKKDYVRQFFDGSAVRFRW-RVRRSSNASVATWGRKLDDRLAPALPATC--KVIRVEDGF  413
            W+   + +F+  +  ++   R       ++A WG++     + A++ +    VIR+EDGF
Sbjct  10   WRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGF  69

Query  414  IRSVGLGADLTRPLSWVQDDVGIYYDATRPSRLETLLADATFSDELVERAANLRRAICDA  473
            +RS++LG +   PLS V DD GIYYDA++PS LE L+ D + +  L+ +A +  ++I  +
Sbjct  70   VRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTG  129

Query  474  GITKYNLAGRANWSRPQGRRVILVPGQVETDASIRFGASGIRSNMELLQAVRAANPDAYL  533
            +++KYNLA       ++   ++LV +Q   D S+ +G +G +    +L+A  A NP+A +
Sbjct  130  DMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEI  189

Query  534  LYKPHPDVMAGLRKVGRGEGDAAQWCDETIGAVSFHELLGSVDEVHVLTSLAGFEALMRG  593
              K HPDV+ G +    ++  A+Q+       VS + LL  V  V V+TS  GFEAL+ G
Sbjct  190  WVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAG  249

Query  594  VKVVTYGQPFYAGWGVTHDAGLTDavrrrrarvLKLDELVAAALILYPTYVSRTT  648
              V  +GQP YA+WG+T+D     A+   R     L+EL AAA + Y  Y+   T
Sbjct  250  KPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQT  304

82) BMULJ_00622 in NC_010804


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  333 bits (1248),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 266/631 (43%), Positives = 402/631 (64%), Gaps = 23/631 (3%)

Query  17   APGVNRIPTLAALLDD----FRLHYRPMGRPAEGAGVLAWGRRPSALAAQRYAAKHGLAV  72
            +PG+ RIP L  +L +    + L  RP+  P E  ++  WG+RPSA  +   A   G +V
Sbjct  6    SPGIWRIPHLEKFLAQPCQKLSL-LRPV--PQEVNAIAVWGHRPSAAKPVAIAKAAGKPV  62

Query  73   YHIEDGFLRSVGLG-KDDPPLAIIFDDTGLYLDASQPSRLESLIaqplrddq-aararal  130
             ++EDGF+RS++LG +++PPL+++ DD G+Y DAS+PS LE L+ +   +    ++AR  
Sbjct  63   IRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREA  122

Query  131  aqaWRDGRVSKYNHSRDL--ERALPDGCVLVVDQTRGDASISCGLADASSFQRMLDAALR  188
             ++   G +SKYN +  +  + +     VLVVDQT  D S++ G A++  F  ML+AA+ 
Sbjct  123  MHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMA  182

Query  189  DHPERTILLKVHPDVVSGRKQGHFDLDAVRAMPRVQVLDDDAHPASVLPLVHEVYTVTSQ  248
            ++P+  I +KVHPDV+ G+K G F    +RA  RV+++ ++  P S+L  V  VY VTSQ
Sbjct  183  ENPQAEIWVKVHPDVLEGKKTGYFA--DLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  249  LGFEALMWGLPVRVFGMPFYAGWGLTRDALPAPA----RRGAATLEQLVHAALIDYCRYV  304
             GFEAL+ G PV  FG P YA+WGLT D  P +A    RRG+ATLE+L  AA + YCRY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  305  DPETGKRCEVETVVAWLALQRRMRQRFTVDIDALGFSGWKKDYVRQFFDGSAVRFRWRVR  364
            DP+TG   ++ TV+ WL LQRR  Q+    + A G++ WK   ++ F+  ++ R+    R
Sbjct  301  DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR  360

Query  365  RSSNASVATWGRKLDDRLAPALPATCKVI-RVEDGFIRSVGLGADLTRPLSWVQDDVGIY  423
             ++ ++   WG K +++  +        + R+EDGF+RS GLG+DL  PLS V D  GIY
Sbjct  361  CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY  420

Query  424  YDATRPSRLETLLADATFSDELVERAANLRRAICDAGITKYNLAGRANW-SRPQGRRVIL  482
            YDATRPS LE LL ++ ++     RA +LR+ + ++ ++KYNL++  +  +++++++VIL
Sbjct  421  YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL  480

Query  483  VPGQVETDASIRFGASGIRSNMELLQAVRAANPDAYLLYKPHPDVMAGLRKVGRGEGDAA  542
            VPGQVE DASI+ G+ +I+SN+ELL++VR  NP+AY++YKPHPDV+ G RK +     +A
Sbjct  481  VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA  540

Query  543  QWCDETIGAVSFHELLGSVDEVHVLTSLAGFEALMRGVKVVTYGQPFYAGWGVTHDAGLT  602
            +  D       + + +   DEVH +TSL+GFEAL++G  V  YG PFYAGWG+T D    
Sbjct  541  ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVD----  596

Query  603  DavrrrrarvLKLDELVAAALILYPTYVSRT  633
            +    RR R L L +L+  ALI+YPTY+  T
Sbjct  597  EHRCPRRERKLTLADLIYQALIVYPTYIHPT  627


 Score =  113 bits (413),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 101/295 (35%), Positives = 165/295 (56%), Gaps = 3/295 (1%)

Query  343  WKKDYVRQFFDGSAVRFRW-RVRRSSNASVATWGRKLDDRLAPALPATC--KVIRVEDGF  399
            W+   + +F+  +  ++   R       ++A WG++     + A++ +    VIR+EDGF
Sbjct  10   WRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGF  69

Query  400  IRSVGLGADLTRPLSWVQDDVGIYYDATRPSRLETLLADATFSDELVERAANLRRAICDA  459
            +RS++LG +   PLS V DD GIYYDA++PS LE L+ D + +  L+ +A +  ++I  +
Sbjct  70   VRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTG  129

Query  460  GITKYNLAGRANWSRPQGRRVILVPGQVETDASIRFGASGIRSNMELLQAVRAANPDAYL  519
            +++KYNLA       ++   ++LV +Q   D S+ +G +G +    +L+A  A NP+A +
Sbjct  130  DMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEI  189

Query  520  LYKPHPDVMAGLRKVGRGEGDAAQWCDETIGAVSFHELLGSVDEVHVLTSLAGFEALMRG  579
              K HPDV+ G +    ++  A+Q+       VS + LL  V  V V+TS  GFEAL+ G
Sbjct  190  WVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAG  249

Query  580  VKVVTYGQPFYAGWGVTHDAGLTDavrrrrarvLKLDELVAAALILYPTYVSRTT  634
              V  +GQP YA+WG+T+D     A+   R     L+EL AAA + Y  Y+   T
Sbjct  250  KPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQT  304

83) MARHY2548 in NC_017067


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  330 bits (1239),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 261/636 (42%), Positives = 393/636 (62%), Gaps = 24/636 (3%)

Query  39   VGTDVDAVLAWGRKDSAIVAERVARRLNLPLYRVEDGFLRSFAPG-QSEHTLSLVFDDKG  97
            V  +V+A+  WG++ SA  +  +A+    P+ R+EDGF+RS+  G ++E  LSLV DD G
Sbjct  32   VPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCG  91

Query  98   IYYDCSVLSAFDVFscrklsererersesirrQW-VGAQVSKYNHARSLNVYPSSRC--V  154
            IYYD S  SA++ +   K ++           +  V +++SKYN A ++    S R   V
Sbjct  92   IYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIV  151

Query  155  LVVDQTRGDASIKYGAASQTNFDDMLNQAWTSYPDHRILVKTHPEVIAGSKKGYLTDHPL  214
            LVVDQT  D S+ YG A+  +F  ML+ A +  P+  I VK HP+V+ G K GY++D  L
Sbjct  152  LVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFAD--L  209

Query  215  LKEDRVVLVADDIHSPSLLRIVDAVFCVTSQMGLEALFWGKRVHCFGMPFYAGRGLTKDT  274
               +RV L+A+++ + SLLR V  V+ VTSQ G+EAL+ GK V CFG P YA++GLT D 
Sbjct  210  RATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDR  269

Query  275  LVAPTF----RKPCTIEQLVHAALIDYCRYVDPETNKRCDPERLISWMGLQRNMMERFGA  330
               +++    R + T+E+L  AA + YCRY+DP+T    D   ++ W+ LQR  +++  +
Sbjct  270  HPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNG  329

Query  331  TLKVARFPRWKRRHLKKFFLGS----ELIENCSDPDAPIVVWGMSNVPE--GDRHRQVI-  383
             L  + +  WK   LK F+  +     +   C+ + A  VVWG+    +  ++ +R+ + 
Sbjct  330  YLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCTAASA-CVVWGVKGEQQWRAEAQRKSLP  388

Query  384  --RVEDGFIRSAGLGVDLVAPQSWVLDTRGIYYDSTKPSDLEQILQFSEIDQTTVERGKA  441
              R+EDGF+RS+GLG DL++P S VLD RGIYYD+T+PSDLE +L+ S++  +   R+  
Sbjct  389  LWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEK  448

Query  442  LIERLCKVGATKYNVGLRDWVRPPNR-KRVILVPGQVESDASVRFGSPTIKTNADLLAAV  500
            L +RL     +KYN+G    + +  + K+VILVPGQVE DAS++ G+ +IK+N +LL +V
Sbjct  449  LRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTV  508

Query  501  RGDNPDAWIVYKVHPDVAAGMRKGKRR--LEEDLYDEVVTDQDMHHMLMQVDEVHTMTSL  558
            R  NP+A IVYK HPDV  G RKG     L  +L D    D D+ + + + DEVHTMTSL
Sbjct  509  RERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSL  568

Query  559  AGFEGLIRGKRVVCYGQPFYCGWGLTEDKEPVARRTRPRSLPELVAAALILYPTYVSSSS  618
            +GFE+L++GK+V CYG PFY GWGLT D +  +RR R  +L++L+  ALI+YPTY+ ++ 
Sbjct  569  SGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTR  628

Query  619  GYFTSVERVLD-EIQLARAEVTILQRVRTQISRYLR  653
                +VE   +  IQ +R  + I ++   ++ RY R
Sbjct  629  LQPITVEEAAEYLIQTPRKPMFITRKKAGRVIRYYR  664

84) kpsC in NC_020911


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  328 bits (1229),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 268/647 (42%), Positives = 401/647 (62%), Gaps = 22/647 (3%)

Query  17   VYNGGFLTQKRMRRILTLSGYDVSLGKPSTDDL--IGVWGQSPTSWRGEAVANRTSAPVL  74
            +Y+ G+    ++ ++L+ +   +SL +P  +++  I+VWG+ P++ +  A+A+ ++ PV+
Sbjct  4    IYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVI  63

Query  75   RVEDAFLRSVlpgrggepplglhlDTRGVHFDPSKPSDLEMILREDPLDDTALLNRARDC  134
            R+ED+F+RS+  G  GEPPL+L +D  G+ +D+SKPS LE ++++ + ++TAL+++AR+ 
Sbjct  64   RLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALISQAREA  122

Query  135  AEAIKRAHLSKYN---AFDPATPAPDAGYVLVIDQTSGDAAVTASRADRNAFLEMLFVAR  191
             ++I  +++SKYN   AF +  +   +  VLV+DQT  D +VT + A+ + F  ML  A 
Sbjct  123  MHTIVTGDMSKYNLAPAFVADESER-TNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  192  EEHPSARILIKTHPETAQGHRDGHYRDADLSQNVTFFSDPISPHHLLDGAIAVYTVSSQY  251
             E+P A I +K HP+  +G + G + D   +Q V ++++ +SP+ LL     VY V+SQY
Sbjct  182  AENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQY  241

Query  252  GFEAIMAGHKPVVFGQPFYVGWGLTDDRMP----LDRRQRNLTRAQLFAGAMILYPKWYD  307
            GFEA++AG     FGQP Y +WGLTDDR P    L  R+ + T  +LFA+A + Y +  D
Sbjct  242  GFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYID  301

Query  308  PYRDELCSLETAIQTLDAHTRAW--RDDHLGWVASGMRLWKRGPLQKVF-GQHRKMMFED  364
            P  +E+  L T +Q L+ + R    R++ L W A+G+ LWK + L+  +     ++ F  
Sbjct  302  PQTGEVSDLFTVLQWLQLQRRHLQQRNGYL-W-APGLTLWKSAILKPFLRTPTNRLSFSR  359

Query  365  HPDKADALAAKTGRGRMVWAGKAADHDSAL-RVEDGFLRSRGLGADLIAPLSLVLDDRGI  423
            +   A A      +G   W + A     +L R+EDGFLRS GLG+DL++PLSLVLD RGI
Sbjct  360  RCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGI  419

Query  424  YYDPTGPSRLEAHIESSPSLPDAATLRAEMLIERITSAGLSKYNLTAK-NFPADLPKGRR  482
            YYD+T PS LE  ++ S  L  A  +RAE L +R+  + LSKYNL A  ++PA     + 
Sbjct  420  YYDATRPSDLEVLLNHSQ-LTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKV  478

Query  483  ILVPGQVEDDASIRLGTTDVTTNRALLQACRAANPAAVILYKPHPDVEAGLRTGAVPD--  540
            ILVPGQVEDDASI+ GT  + +N  LL++ R  NP A I+YKPHPDV  G R G +P   
Sbjct  479  ILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAEL  538

Query  541  AANIADVVLTHTSPIAALDAVDAVWTMTSTIGFEALLRGKDVTCLGTPFYAGWGLTEDRA  600
            +A++AD    ++  I  ++  D V TMTS  GFEALL+GK+V C G PFYAGWGLT D  
Sbjct  539  TAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVD-E  597

Query  601  TPIPRRTALPTLAQLTHAVLIDYPRYFDPVSGHPCPVEVVIERLLQG  647
               PRR    TLA+L    LI YP Y++P   +P  VE   E L+Q 
Sbjct  598  HRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQT  644


 Score =  109 bits (396),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 101/283 (36%), Positives = 170/283 (61%), Gaps = 11/283 (3%)

Query  52   VWG-QSPTSWRGEAVANRTSAPVLRVEDAFLRSVlpgrggepplglhlDTRGVHFDPSKP  110
            VWG ++   WR+EA  +R S P+ R+ED+FLRS   G +  PPL+L LD RG+ +D+++P
Sbjct  369  VWGVKGEQQWRAEA--QRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRP  426

Query  111  SDLEMILREDPLDDTALLNRARDCAEAIKRAHLSKYN---AFDPATPAPDAGYVLVIDQT  167
            SDLE++L +  L  +  + RA    + +  + LSKYN    F  ++ A D   +LV +Q 
Sbjct  427  SDLEVLLNHSQLTLAQQM-RAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQV  485

Query  168  SGDAAVTASRADRNAFLEMLFVAREEHPSARILIKTHPETAQGHRDGHYRDADLSQNVTF  227
             +DA++ ++    ++ LE+L   RE +P A I+ K HP+   G+R G+   A+L+ +++ 
Sbjct  486  EDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIP-AELTAELAD  544

Query  228  FSDPISPHHL--LDGAIAVYTVSSQYGFEAIMAGHKPVVFGQPFYVGWGLTDDRMPLDRR  285
            + +++ ++ +  ++ A  V T++S  GFEA++ G     +G PFY GWGLT D     RR
Sbjct  545  Y-QALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRR  603

Query  286  QRNLTRAQLFAGAMILYPKWYDPYRDELCSLETAIQTLDAHTR  328
            +R+LT A+L+  A+I+YP   +P R +  ++E A + L    R
Sbjct  604  ERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPR  646

85) kpsC in NC_003911


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  321 bits (1205),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 269/620 (44%), Positives = 388/620 (63%), Gaps = 29/620 (4%)

Query  45   LPSEGDQVGIWGNSPTAHRGLAVAARHAAPLLRVEDAFLRSLFPGRAGEPPLGLLLDRAG  104
            +P E + +++WG+ P+A + +A+A   + P++R+ED+F+RSL  G  GEPPL+L++D  G
Sbjct  32   VPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCG  91

Query  105  VHFDPTTPSDLEQLLTSAPLDDTTLLNRARDAMARIRENHLSKYCATDPDLPLPEP---G  161
            + +D++ PS LE+L+   + ++T+L+++AR+AM  I   ++SKY    P +   E+    
Sbjct  92   IYYDASKPSALEKLVQDKA-GNTALISQAREAMHTIVTGDMSKY-NLAPAFVADESERTN  149

Query  162  YVLVIDQTRGDASVTASGGNDALFREMLVFAQEEHPGARVLIKTHPETAAGFRPGYYGER  221
             VLV+DQT  D SVT + +    F  ML  A  E+P A + +K HP+   G + GY+++ 
Sbjct  150  IVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADL  209

Query  222  DISVRVSLYDAPLSPWALLDGAVGVYTLSSQLGFEAILAGHKPRVFGQPFYAGWGLTLDE  281
              + RV L    +SP +LL     VY ++SQ GFEA+LAG     FGQP YA+WGLT D 
Sbjct  210  RATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDR  269

Query  282  HP----VPRRERRLTRAQLFAAAMILYPTWYDPFGDKLCELETVLDTLEAQTRAWRQDRA  337
            HP    ++ R    T  +LFAAA + Y    DP  + + +L TVL+ L+ Q R   Q+R 
Sbjct  270  HPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRH-LQQRN  328

Query  338  G--WTAGGMRLWKRRPLKRMF-GRFGRISFTDTPAAGDP------RPHMVWaaraaasdt  388
            G  W++ G+ LWK   LK  +     R+SF+   +A+ +      + +  W A A     
Sbjct  329  GYLWAP-GLTLWKSAILKPFLRTPTNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSL  387

Query  389  at-rVEDGFLRSRGLGAELVPPLSLVTDDSGIYYDPTRPSALESLIARRAELRADQRQRA  447
            +  R+EDGFLRS GLG++L+PPLSLV D  GIYYD+TRPS LE L+  +++L   Q+ RA
Sbjct  388  PLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLN-HSQLTLAQQMRA  446

Query  448  EALIRMLTTARISKYNLGG--ALPDLPPGHR-ILVPGQVEDDASILTGTGEIRSNLDLLR  504
            E L + L  +++SKYNLG+  +LP  + + + ILVPGQVEDDASI TGT  I+SNL+LLR
Sbjct  447  EKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLR  506

Query  505  SVRAAHPQAVIVYKPHPDVEAGLRVGGIDP---GTLADVIATQADPMQLLDQVNEVWTLT  561
            +VR  +P+A IVYKPHPDV  G R G+I +   + LAD  A +AD +Q +++ +EV T+T
Sbjct  507  TVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMT  566

Query  562  SLLGFEALLRGLPVTTLGAPFYAGWGLTRDLGPIPARRQARPDLAGLVHAALIDYPRYWD  621
            SL GFEALL+G  V   G PFYAGWGLT D    P RR+ +  LA+L+  ALI YP Y +
Sbjct  567  SLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCP-RRERKLTLADLIYQALIVYPTYIH  625

Query  622  PRTGQPCPVEVAAQRLASGA  641
            P   QP  VE AA+ L   +
Sbjct  626  PTRLQPITVEEAAEYLIQTP  645

86) Syncc9902_0463 in NC_007513


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  317 bits (1187),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 250/616 (41%), Positives = 389/616 (64%), Gaps = 20/616 (3%)

Query  37   RDVDALLAWGRRPSARRVERLGQHWGLPVWHIEDGFLRSFGKGRadpplalliddl-GVH  95
            ++V+A+  WG+RPSA +   +++  G PV ++EDGF+RS++ G  + P   L+ D  G+ 
Sbjct  34   QEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIY  93

Query  96   FDATAPSRLEHLI---ATPLSLEQRCRAQQVQALWCEQRLSKVNPAQESPVPE-ERFVLV  151
            +DA+ PS LE L+   A   +L  + R      +  +    ++ PA  +  +E   +VLV
Sbjct  94   YDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLV  153

Query  152  VDQSAGDYSIPLGGASPDCFGQMLQEALADHPACTVVLKVHPDVIHGRARGHFSAKDLVH  211
            VDQ+  D S+  G A+P+ F+ ML+ A+A++P   + +KVHPDV++G+  G F+     +
Sbjct  154  VDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQ  213

Query  212  PRIRVSADGLHPAGLLQRAEAVYAVTSQMGFEALLWGRPVHCFGMPFYAGWGLTHDRLAA  271
             R+R+ A+ + P +LL++   VY VTSQ GFEALL G+PV CFG P YA+WGLT+DR + 
Sbjct  214  -RVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQ  272

Query  272  P---DRRQQGVSLEALVHGALIAYPHCIDPHQHEPCSIETLMRAIGLQRRMHALAPRSVQ  328
            +     R+ + +LE L  +A + Y + IDP+  E   + T+++ + LQRR   L  R+  
Sbjct  273  SALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRR--HLQQRN--  328

Query  329  AF----GFTPWKQRNLRRFLAGSEVRYPMPWMTPDTNIDAVAVWGRRGKPRVLSAADRRR  384
            ++    G+T WK   L+ FL  +  R + ++    ++  A  VWG +G  +  + A+R+ 
Sbjct  329  GYLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCTAAS--ACVVWGVKGEQQWRAEAQRKS  386

Query  385  LPTLHVEDGFLRSVGLGADLIDPISWVVDGRGMYYDATGPSDLEILLAHGDWSVLQLERA  444
            LP  ++EDGFLRS GLG+DL+ P+S V+D RG+YYDAT PSDLE+LL H++ ++ Q  RA
Sbjct  387  LPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRA  446

Query  445  AQLRHRLVRAAITKYNLQST-PWQRPTGIQRVVLVVGQVESDASIRFGAPGVCTNLGLLQ  503
             +LR+RLV + ++KYNL +  +    +  ++V+LV GQVE DASI+ G+ ++ +NL LL+
Sbjct  447  EKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLR  506

Query  504  AVRAAEPEAYLVYKPHPDVSAGLCRAGEGEEIAQECCDEVLTSGSIDQLFTQVDALHVLT  563
            +VR  +P+AY+VYKPHPDV  G  +++   E++ E  D     + I Q + + D +H +T
Sbjct  507  TVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMT  566

Query  564  SLAGFEGILRGVEVHCWGLPFYAGWGLTRDRETCSRRGRCLELDALLHAALIEYPRYVSR  623
            SL+GFE++L+G +VHC GLPFYAGWGLT D + C+RR R L L  L+  ALI YP Y+  
Sbjct  567  SLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHP  626

Query  624  GSGWFITPEQAIDELI  639
                 IT E+A + LI
Sbjct  627  TRLQPITVEEAAEYLI  642


 Score =  112 bits (408),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 101/308 (33%), Positives = 179/308 (59%), Gaps = 12/308 (3%)

Query  327  VQAFGFTPWKQRNLRRFLAGSEVRYPMPWMTPDTNIDAVAVWGRR---GKPRVLSAADRR  383
            +  ++   W+  +L +FLA +  + ++ +  P+ +++A+AVWG+R   +KP  ++ A  +
Sbjct  2    IGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQ-EVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  384  RLPTLHVEDGFLRSVGLGADLIDPISWVVDGRGMYYDATGPSDLEILLAHGDWSVLQLER  443
              P +++EDGF+RS++LG +   P+S VVD+ G+YYDA+ PS LE L+ +   +   + +
Sbjct  61   --PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQ  118

Query  444  AAQLRHRLVRAAITKYNLQSTPWQRPTGIQRVVLVVGQVESDASIRFGAPGVCTNLGLLQ  503
            A +  H +V + ++KYNL ++     +    +VLVV+Q  +D S+ +G +G     ++L+
Sbjct  119  AREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLE  178

Query  504  AVRAAEPEAYLVYKPHPDVSAGLCRAGEGEEIAQECCDEVLTSGSIDQLFTQVDALHVLT  563
            A  A +P+A +  K HPDV  G   +  ++  A +    +  + S + L+ +V  + V+T
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  564  SLAGFEGILRGVEVHCWGLPFYAGWGLTRDRET-----CSRRGRCLELDALLHAALIEYP  618
            S  GFE++L G  V C G P YA+WGLT DR+       +RRG    L+ L+ AA + Y 
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLRYC  297

Query  619  RYVSRGSG  626
            RY+   +G
Sbjct  298  RYIDPQTG  305

87) Pput_3912 in NC_009512


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  314 bits (1177),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 264/597 (45%), Positives = 385/597 (65%), Gaps = 30/597 (5%)

Query  46   VMAWGRKPSAIKAMAEAHKAGKPVLTLEDGFIRSVGLGAD-EPPLSLIVDDVGVYYDASQ  104
            +  WG++PSA K++A A  AGKPV+ LEDGF+RS++LG + EPPLSL+VDD G+YYDAS+
Sbjct  39   IAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASK  98

Query  105  PSRLEQLIATPLDAEQ--TQRALALRSLWQQQRVSKYNDAR--IELPALPADCVLVADQT  160
            PS LE+L+    +     +Q   A++++     +SKYN A   +   +  ++ VLV DQT
Sbjct  99   PSALEKLVQDKAGNTALISQAREAMHTI-VTGDMSKYNLAPAFVADESERTNIVLVVDQT  157

Query  161  CGDASLQ--GAGASDFRAMLEAALARYPHSTIVLKVHPDVVAGRKAGHFDLAALAGNPRV  218
              D S+    AG+ +F AMLEAA+A  P++ I +KVHPDV+ G+K+G F  A L +  RV
Sbjct  158  FNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYF--ADLRATQRV  215

Query  219  QVLAHNVHPADLLPRMRAVFVMTSQLGFDALLWDVPVHTWGMPFYAGWGLTDDRLPAPS-  277
            +++A+NV P  LL ++  V+V+TSQ GF+ALL + PV   G P YA+WGLTDDR P ++ 
Sbjct  216  RLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSAL  275

Query  278  ---RRKPVPLAQLIHASLVAYPRYVCPERGQPCTPEVLINWLGLQRRHRSVLPNTVQML-  333
               RR +  L +L+ A+ + Y RY+ P+ G+      +++WL LQRRH   L +    L 
Sbjct  276  LSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRH---LQQRNGYLW  332

Query  334  --GFSRWKEPLANLFFNGAAIRFVKPEQPLAQDLPVVSWGCKHDTHLCAHP----LPVNR  387
              G++ WK ++ + F+  ++ R+  + +  A    VV WG K + +  A++    LP+ R
Sbjct  333  APGLTLWKSAILKPFLRTPTNRLSFSRRCTAASACVV-WGVKGEQQWRAEAQRKSLPLWR  391

Query  388  VEDGFLRSVGLGAGKARPLSWVVDDLGIYYDATRPSRLERILAEEPFDPQllarahalrl  447
            +EDGFLRS GLG++   PLS V+D  GIYYDATRPS LE +L +  +      RA+ LR 
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  448  aicaaGLTKYNLPGA-SWQRPSHAQRVILVPGQVEGDASIRFGGNRIRSNLQLLRAVREQ  506
             +  + L+KYNL +  S    +  ++VILVPGQVE+DASI+ G   I+SNL+LLR+VRE+
Sbjct  452  RLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRER  511

Query  507  NPDAWVLYKPHPEVLAGTRARGDDEAQTVHWCDEVIGDTPLQQLLEVVDELHVLTSQSGF  566
            NP+A ++YKPHP+VL G R  +     T +  D    D+ + Q ++  DE+H +TS SGF
Sbjct  512  NPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGF  571

Query  567  EALLRGVPVTTYGQPFYAGWGLTRDMDLQAPVQARRSRQLTLDQLVAGTLLLYPTYV  623
            EALL+G  V  YG PFYAGWGLT D + + P   RR R+LTL +L+  +L++YPTY+
Sbjct  572  EALLHGKHVHCYGLPFYAGWGLTVD-EHRCP---RRERKLTLADLIYQALIVYPTYI  624


 Score =  129 bits (473),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 108/259 (42%), Positives = 158/259 (62%), Gaps = 11/259 (4%)

Query  60   AEAHKAGKPVLTLEDGFIRSVGLGADE-PPLSLIVDDVGVYYDASQPSRLEQLIA-TPLD  117
            AEA++ + P+  +EDGF+RS GLG+D  PPLSL++D  G+YYDA++PS LE L+  + L 
Sbjct  380  AEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLT  439

Query  118  AEQTQRALALRSLWQQQRVSKYN-DARIELPALPAD--CVLVADQTCGDASLQGAGASDF  174
              Q  RA  LR    + ++SKYN +A + LPA + D   +LV++Q  +DAS++ +G+  +
Sbjct  440  LAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIK-TGTVSI  498

Query  175  RAMLE---AALARYPHSTIVLKVHPDVVAGRKAGHFDLAALAGNPRVQVLAHNVHPADLL  231
            ++ LE   +   R PH+ IV K HPDV+ G + G++     A  +  Q L  ++     +
Sbjct  499  KSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQC--I  556

Query  232  PRMRAVFVMTSQLGFDALLWDVPVHTWGMPFYAGWGLTDDRLPAPSRRKPVPLAQLIHAS  291
             R   V  MTS  GF+ALL +  VH  G+PFYAGWGLT D    P R + + LA+LI  +
Sbjct  557  QRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQA  616

Query  292  LVAYPRYVCPERGQPCTPE  310
            L+ YP Y+ P R QP T E
Sbjct  617  LIVYPTYIHPTRLQPITVE  635


 Score =  119 bits (434),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 93/267 (35%), Positives = 159/267 (60%), Gaps = 8/267 (2%)

Query  384  PVNRVEDGFLRSVGLGAGKARPLSWVVDDLGIYYDATRPSRLERILAEEPFDPQllarah  443
            PV R+EDGF+RS++LG     PLS VVDD GIYYDA++PS LE+++ + + +  L+++A+
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  444  alrlaicaaGLTKYNLPGASWQRPSHAQRVILVPGQVEGDASIRFG--GNRIRSNLQLLR  501
                +I +++++KYNL+ A     S+   ++LV +Q   D S+ +G  G +  + +    
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  502  AVREQNPDAWVLYKPHPEVLAGTRARGDDEAQTVHWCDEVIGDTPLQQLLEVVDELHVLT  561
               + +++ WV  K HP+VL G ++    + ++ ++   +  + + Q LL  V  + V+T
Sbjct  181  MAENPQAEIWV--KVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  562  SQSGFEALLRGVPVTTYGQPFYAGWGLTRDMDLQAPVQARRSRQLTLDQLVAGTLLLYPT  621
            SQ GFEALL G PVT +GQP YA+WGLT D + Q+++ + R    TL++L A++ L Y  
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCR  298

Query  622  YVSLVTNRFTTAERTLYELQNWHALPQ  648
            Y+    +  T     L+ + +W  L +
Sbjct  299  YI----DPQTGEVSDLFTVLQWLQLQR  321

88) G157_01775 in NC_022347


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  313 bits (1175),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 247/617 (41%), Positives = 378/617 (62%), Gaps = 38/617 (6%)

Query  27   KNITKE-DIFVGWGRKNSGLKAIALAKKHNAKFMLLEDGFLRSLNLGIENSPSFSIVKDD  85
            + + +E + +  WG++ S+ K++A+AK      + LEDGF+RSL+LG++  P++S+V DD
Sbjct  30   RPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDD  89

Query  86   VGVYYDASTPSRLENILNTYEFSPKELTWakkaielikkeklSKYNNNLCIPQELFSANE  145
             G+YYDAS PS LE++++    +   ++ A+ A++ I    +SKYN    ++  + + + 
Sbjct  90   CGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYN----LAPAFVADES  145

Query  146  ER---VLIITQVANDASLRFGLASDFSTQDIINDALKENPNAKIYIKIHPDVLSGKKQSD  202
            ER   VL++ Q  ND S+ +G A+      +++ A+ ENP+A I +K+HPDVL GKK + 
Sbjct  146  ERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGY  205

Query  203  FSMQDLPSRCVILKENYNPIELLSHFKKVYTKTSGMGFEALMLGCKCVCYGMPFYAGWGL  262
            F+      R  ++ EN +P  LL H  +VY  TS  GFEAL+ G    C+G P YA+WGL
Sbjct  206  FADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGL  265

Query  263  TQDK-----LECKRRIKKRSLEEVFYAAYILYSEYFNPYLNQKSDIFDTI--FTLARYKK  315
            T+D+     L   RR    +LEE+F AAY+ Y  Y++P   + SD+F  +  + L R + 
Sbjct  266  TDDRHPQSALLSARRGSA-TLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQR-RH  323

Query  316  IEQVNSHTLYFLGFTLWKRWFMKPFFKAKNNKIIFLNSLNELYKANLNSEDKIFIWGKKY  375
            ++Q N+  L   G+TLWK  ++KPF+++  N++ F             +     +WG K 
Sbjct  324  LQQRNGY-LWAPGLTLWKSAILKPFLRTPTNRLSF--------SRRCTAASACVVWGVKG  374

Query  376  DKALLAKDFNNEIFL--VEDGFLRSVFLGSDLTRPFSLIVDSKGLYVDPNHPSDLEELLQ  433
            ++   A    + + L  +EDGFLRS  LGSDL  P+SL++D +G+Y D+ +PSDLE LL+
Sbjct  375  EQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLN  434

Query  434  NHEFDDTLRQRAKKLITTITQNKFSKYN-GLKHEKLDFNTNKKIILIPAQVEDDASMILG  492
            + ++  + + RA KL   + ++K+SKYN G          +KK+IL+P+QVEDDAS+  G
Sbjct  435  HSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTG  494

Query  493  GADFDT-LKLLQSVRAANKDAFVVFKPHPDVLSGNRKGLKDKDIILKYCDEIIENVSIDS  551
               + + L LL++VR  N +A++V+KPHPDVL GNRKG    DI      E+ +  ++D+
Sbjct  495  TVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKG----DIPAELTAELADYQALDA  550

Query  552  AINAC----DEVHTITSTSGFDALLRGKKVVVYGKPFYAGWGLTQDLHHISRRTRVLSLE  607
             I  C    DEVHT+TS SGF+ALL+GK V  YG PFYAGWGLT D H+ +RR R L+L 
Sbjct  551  DIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLA  610

Query  608  ELVAGVLILYPRYIHPK  624
            +L+   LI+YP YIHP 
Sbjct  611  DLIYQALIVYPTYIHPT  627

89) lipA in NC_014532


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  310 bits (1163),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 239/575 (42%), Positives = 379/575 (66%), Gaps = 25/575 (4%)

Query  5    QNLDALAYWGTPACRRRAMDLAERTGVPLFSLEEGFLRAYA-EHEGLPSLSLIVDDLGTY  63
            Q+++A+A WG  +   +++ +A  +G P++ LE+GF+R+     +G P+LSL+VDD G Y
Sbjct  34   QEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIY  93

Query  64   GDALSPPRLEALLNEEASPLKGIESKADKAMHLLMSERLSRYNDAPDLDASLLSCDARER  123
             DA  P+ LE L+++ A+   ++ S+A  AMH +++  +S+YN AP + A     +  + 
Sbjct  94   YDASKPSALEKLVQDKAGN-TALISQAREAMHTIVTGDMSKYNLAPAFVAD--ESERTNI  150

Query  124  VLVVDQAWDELGGKAGQHAP-SFQDMLAAALAENPDATI-CAYTPHAGRSSRDHESGALT  181
            VLVVDQ+ ++++   G+ +P  F  ML AA+AENP+A I     P+   + +   +G ++
Sbjct  151  VLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKK---TGYFA  207

Query  182  EHDGGERVVVLHKQVNPWSLLESMSRVYTVGAHIGFEALMAGLPVSVFGMPWYAGWGATD  241
            +  + +RV ++  +V+P SLL  +SRVY V ++ GFEAL+AG PV+ FG PWYA+WG TD
Sbjct  208  DLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTD  267

Query  242  DR-----LACAHRVRSRSVGELFAAAYIRCSRYLNPVTLEPGDIFDVIRWLArqrrvegr  296
            DR     L  A+R  + ++ ELFAAAY+R  RY++P T E +D+F V++WL  QRR   +
Sbjct  268  DRHPQSALLSARRGSA-TLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQ  326

Query  297  iegrriMVGFRCWKAANLGARLSLLPTRLARVADARKAERLGLGPRDALVLWGRDTPPEI  356
             +G     G+  WK+A L +   +L T   R++ +R+       +  A V+WG     + 
Sbjct  327  RNGYLWAPGLTLWKSAILKP---FLRTPTNRLSFSRRC-----TAASACVVWGVKGEQQW  378

Query  357  SSLAVRTGARLLHMEDGFVRSVGLGSEMVPPRSIVLDERGIYFDPGQASDLEYLLNTHRF  416
             + A R +  L +MEDGF+RS GLGS+++PP S+VLD RGIY+D+ ++SDLE LLN  ++
Sbjct  379  RAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQL  438

Query  417  TDDELERAERVRSWIVQHRITKYNVEPH-CVPDWDTQGREVVLVPGQVEDDASIRYGTNA  475
            T  +  RAE++R ++V+ +++KYN+ ++  +P   ++++ V+LVPGQVEDDASI+ GT +
Sbjct  439  TLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA-KAKDKKVILVPGQVEDDASIKTGTVS  497

Query  476  VRTNLGLLEAARTAHPEAFLVYKPHPDVIRGGRQGHVVFSETFDLVDHVETELSVISCIE  535
            +++NL LL + R  +P+A++VYKPHPDV+ G R+G++    T +L D    +  +I CI+
Sbjct  498  IKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQ  557

Query  536  ACDTVHTMTSLTGFDALLRGKRVVTYGEPFYAGWG  570
              D VHTMTSL+GF+ALL+GK+V  YG PFYAGWG
Sbjct  558  RADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWG  592

90) Syncc9605_2216 in NC_007516


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  307 bits (1151),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 266/616 (44%), Positives = 389/616 (64%), Gaps = 20/616 (3%)

Query  22   RDVDVLLAWGRRPSALRVERLARQWDLPVWHLEDGLLRSVAKG-REHPPLALLVDELGVH  80
            ++V+ +  WG+RPSA +   +A+  + PV +LEDG++RS+  G   +PPL+L+VD+ G+ 
Sbjct  34   QEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIY  93

Query  81   FDATAPSRIEQLIAAPITVTE-ANRARALQRLWCEQRLSKVNPPRE---AEAPQESYVLV  136
            +DA+ PS +E+L+      T   ++AR   +      +SK N +      E+ + + VLV
Sbjct  94   YDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLV  153

Query  137  VDQSAGDRSIALGLADASCFQRMLKAALQDHPDCTVVVKVHPDVISGRSRGHFTAEDL-A  195
            VDQ+  D S++ G A++  F  ML AA+ ++P+  + VKVHPDV+ G+  G F+  DL A
Sbjct  154  VDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFA--DLRA  211

Query  196  HPRVRLSADGGHPARLLERARAVYVVTSQMGFEALLWGRPVHCFGMPFYGGWGLTHDRCD  255
              RVRL A+   P  LL +   VYVVTSQ GFEALL G+PV CFG P Y++WGLT+DR  
Sbjct  212  TQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHP  271

Query  256  APA---RRRQGASLEALVHAVLVGACRCIDPQLHQPCRIETLMGAIG--lqrrlqaqqpr  310
             +A    RR +A+LE L  A  +  CR IDPQ  +   +  L   +     +R + QQ  
Sbjct  272  QSALLSARRGSATLEELFAAAYLRYCRYIDPQTGE---VSDLFTVLQWLQLQRRHLQQRN  328

Query  311  rCV-AFGFTPWKQRNLRRFLAGSQLRFRAPWRRIPQGVDAVVVWGRRAKPRLLEAAARRQ  369
              + A G+T WK   L+ FL  +  R+  ++R    +  A VVWG ++  +    A R+ 
Sbjct  329  GYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR--CTAASACVVWGVKGEQQWRAEAQRKS  386

Query  370  LPVLQVEDGFLRSVGLGADLVDPVSWVVDHQGVYYDATRPSDLESLLATQRWTSaqcqra  429
            LP+ ++EDGFLRS GLG+DL+ P+S V+D +G+YYDATRPSDLE LL   + T AQ  RA
Sbjct  387  LPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRA  446

Query  430  aalrqrlvqEAITKYNLQAEPWLRP-AGAHRVVLVIGQVESDASIRYGAPGLRTNRALLE  488
              LRQRLV+  ++KYNL A+  L + A   +V+LV GQVE DASI+ G+ ++++N  LL 
Sbjct  447  EKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLR  506

Query  489  AVRAAEPEAYLVYKPHPDVVAGlcragagedaaaalcdeVLPQGSIQQLFTQIDALHVLT  548
            +VR  +P+AY+VYKPHPDV+ G  +++   + +A L D    ++ I Q + + D +H +T
Sbjct  507  TVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMT  566

Query  549  SLAGFEALLRGLEVHCWGLPFYAGWGLTHDFERCGRRQRQLSLDELVHAALIDYPRYVSR  608
            SL+GFEALL+G +VHC GLPFYAGWGLT D +RC RR+R+L+L +L+  ALI YP Y+  
Sbjct  567  SLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHP  626

Query  609  NSGWFITPEQAIDELV  624
                 IT E+A + L+
Sbjct  627  TRLQPITVEEAAEYLI  642

91) lipA in NC_014532


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  306 bits (1147),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 282/614 (46%), Positives = 398/614 (65%), Gaps = 20/614 (3%)

Query  93   QRLCHLGSPRARHAGAVAGWGLKPSTRKAREHADRHRLPYIAIEDGFLRSWGLGVEGHPP  152
            Q+L  L  P +++  A+A WG +PS+ K+   A     P I +EDGF+RS +LGV+G+PP
Sbjct  24   QKLSLL-RPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPP  82

Query  153  HSLVVDPLGIYYDASRPSALENLILAAEHTSEAEL-ARARSGMQQLRELRLSKYNHApd-  210
             SLVVD  GIYYDAS+PSALE+L+   + ++++ L ++AR +M+ +    +SKYN AP  
Sbjct  83   LSLVVDDCGIYYDASKPSALEKLV--QDKAGNTALISQAREAMHTIVTGDMSKYNLAPAF  140

Query  211  rplfdddrprVLVVDQTAGDASIPGGLAEADDFQRMLESARAEHPESEILVKVHPDVIAG  270
             +   +    VLVVDQT  D S+  G A +++F  MLE+A AE+P++EI VKVHPDV+ G
Sbjct  141  VADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEG  200

Query  271  KKEGHLLAAGQLPGCRLIGETLSPWSLLDAVHCVHVVSSQLGFEALLADKRVVCHGVPFY  330
            KK G +         RLI+E +SP SLL  V  V VV+SQ GFEALLA+K V C G P Y
Sbjct  201  KKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWY  260

Query  331  AGWGLTDDRRH-----CPRRGVPRSLAQVfaaayfgyaryaNPYTGQAGDFEQTLELIGD  385
            A+WGLTDDR+       +RRG + +L ++FAAAY+ Y RY +P TG+ +D+   L+ +  
Sbjct  261  ASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQL  319

Query  386  QTRQ-QRRLAGRWVTYGLSSWKRGFVGDFLGDGTAIRHLRHNKPPEGAERGERLLCWASQ  444
            Q R+ Q+R +  W   GL+ WK +++  FL   T+  +L  ++   +A      + W+ +
Sbjct  320  QRRHLQQRNGYLWAP-GLTLWKSAILKPFL--RTPTNRLSFSRRCTAASAC---VVWGVK  373

Query  445  LDSAAEQRCRERDHVLWRMEDGFLRSIGLGVDLARPLSLVVDSLGIHYDANRESELERTL  504
             +       + +   LWRMEDGFLRS GLG DL  PLSLV+D  GI YDA R S+LE  L
Sbjct  374  GEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLL  433

Query  505  NEASFPPallqraarlrerlvalrlSKYNVPGARRLQ-RPEGGRLLLVPGQVETDASIAH  563
            N++ +  A   RA +LR+RLV  +LSKYN+ +   L  ++ + +++LVPGQVE DASI  
Sbjct  434  NHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKT  493

Query  564  GTFDIRTNGDLLAAVRQANPEARILYKPHPDVTTGARVGALSPG-DERLYdlevgdvdiv  622
            GT  I++N +LL +VR+ NP+A I+YKPHPDV  G R G +++     L D +  D DI+
Sbjct  494  GTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADII  553

Query  623  dlldmvdevHTMCSLAGFEALLRGRRVVTYGMPFYAGWGLTEDRHACPRRRRSLELDALV  682
            + ++  DEVHTM SL+GFEALL+G++V  YG+PFYAGWGLT D H CPRR R L L  L+
Sbjct  554  QCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLI  613

Query  683  AATLILYPLYVDPG  696
              +LI+YP Y++P 
Sbjct  614  YQALIVYPTYIHPT  627

92) kpsC in NC_018286


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  300 bits (1124),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 260/646 (41%), Positives = 397/646 (62%), Gaps = 40/646 (6%)

Query  20   YNAGFLRQKRLQRILSLAGYDLRLGKPTADDL--VAVWGNADTAHRGHAVAEARGCGLLR  77
            Y++G+ R  +L+++L+ +   L L +P ++++  +AVWG+  +A +  A+A A G  ++R
Sbjct  5    YSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIR  64

Query  78   VEDAFLRSIHPGRAGEPPLGLLLDRSGLHFDPATPSDLEQLLASHPLDDSALMrrarrai  137
            +ED+F+RS++ G  GEPPL+L++D  G+ +D++ PS LE+L+   + +++AL+ +AR A+
Sbjct  65   LEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALISQAREAM  123

Query  138  arLQDAHLSKYN---AYSPQAPVPDPGYVLVIDQARGDASVRASTPFEGTDHARFQEMLY  194
              +  +++SKYN   A+ ++ +      VLV+DQ+  D SV     +  ++   F  ML 
Sbjct  124  HTIVTGDMSKYNLAPAFVADES-ERTNIVLVVDQTFNDMSV----TYGNAGPHEFAAMLE  178

Query  195  YAQDEHPGARIIIKSHPEDRAGHRPGYYSAADAQGRVEILDTPVSPWALLEGAIAVYTVS  254
             A  E+P A I +K HP+   G + GY++   A  RV ++   VSP +LL     VY V+
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  255  SQMGFEAILCGHKPRIFGQPFYAGWGLSEDEFP----ITRRQRSLTRAQLFAAAMILYPT  310
            SQ GFEA+L G     FGQP YA+WGL++D  P    ++ R+ S T  +LFAAA + Y  
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCR  298

Query  311  WYSPHHDRLCELEEVIDALEAETRAWQQDRAG--WIASGMRLWKRHPLQTFF-GRYRRLR  367
               P+ + + +L  V++ L+ + R   Q+R G  W A+G+ LWK   L+ F+     RL 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRH-LQQRNGYLW-APGLTLWKSAILKPFLRTPTNRLS  356

Query  368  FSNSPKTAKASGRNWMIWAGRTSTGQSPGAH-------RVEDGFLRSRGLGADLIPPLSL  420
            FS    +A A     ++W+ +      + A+       R+EDGFLRS GLG+DL+PPLSL
Sbjct  357  FSRRCTAASAC----VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSL  412

Query  421  VVDRQGIYYDPHQPSDLEDLITARVTLTPEQQQRAETLTQRLVQDSLSKYNLGG--TVPD  478
            V+D++GIYYD+ +PSDLE L+  +  LT  QQ RAE L QRLV+  LSKYNLG+  ++P 
Sbjct  413  VLDKRGIYYDATRPSDLEVLLN-HSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA  471

Query  479  LPEGHRVLVV-GQVADDASVRLGCEKIatnadllraaraanPGAVLIYKPHPDVEAGLRD  537
             + + +V++V GQV DDAS++ G   I +N +LLR+ R  NP A ++YKPHPDV  G R 
Sbjct  472  KAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRK  531

Query  538  GSIAAE---QLADVVVPDSDPMALLDMVHDVWTMTSLLGFEALLRGVKVTTVGAPFYAGW  594
            G I+AE   +LAD    D+D +  ++  ++V TMTSL GFEALL+G  V   G PFYAGW
Sbjct  532  GDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGW  591

Query  595  GLTTDLGAVPVARRQARPSLMGLVHAALIDYPRYVDPVSGLPCQVE  640
            GLT D      +RR+ + +L +L+  ALI YP Y++P    P  VE
Sbjct  592  GLTVD--EHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVE  635


 Score =  104 bits (379),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 102/295 (35%), Positives = 164/295 (56%), Gaps = 13/295 (4%)

Query  45   KPTADDLVAVWGNADTAHRGHAVAEARGCGLLRVEDAFLRSIHPGRAGEPPLGLLLDRSG  104
            + TA     VWG  +  ++ +A A+ ++  L R+ED+FLRS   G    PPL+L+LD+ G
Sbjct  360  RCTAASACVVWGVKGEQQW-RAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRG  418

Query  105  LHFDPATPSDLEQLLASHPLDDSALMrrarraiarLQDAHLSKYN---AYSPQAPVPDPG  161
            + +D++ PSDLE LL    L  +  MR  +     L ++ LSKYN    +S  A   D  
Sbjct  419  IYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQR-LVESKLSKYNLGADFSLPAKAKDKK  477

Query  162  YVLVIDQARGDASVRASTPFEGTDHARFQEMLYYAQDEHPGARIIIKSHPEDRAGHRPGY  221
             +LV +Q  +DAS++++T    ++     E+L   ++ +P A I+ K+HP+   G+R G 
Sbjct  478  VILVPGQVEDDASIKTGTVSIKSN----LELLRTVRERNPHAYIVYKPHPDVLVGNRKGD  533

Query  222  YSA--ADAQGRVEILDTPVSPWALLEGAIAVYTVSSQMGFEAILCGHKPRIFGQPFYAGW  279
             +A  +   +  + LD+ +     ++ A  V T++S  GFEA+L G   + +G PFYAGW
Sbjct  534  IPAELTAELADYQALDADIIQ--CIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGW  591

Query  280  GLSEDEFPITRRQRSLTRAQLFAAAMILYPTWYSPHHDRLCELEEVIDALEAETR  334
            GL+ DE    RR+R LT A+L+  A+I+YPT   P + +   +EE  + L    R
Sbjct  592  GLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPR  646

93) kpsC in NC_018290


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  299 bits (1121),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 260/646 (41%), Positives = 396/646 (62%), Gaps = 40/646 (6%)

Query  20   YNAGFLRQKRLRRILSLAGYDLRLGKPTADDL--VAVWGNADTAHRGHAVAEAQGCGLLR  77
            Y++G+ R  +L ++L+ +   L L +P ++++  +AVWG+  +A +  A+A A G  ++R
Sbjct  5    YSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIR  64

Query  78   VEDAFLRSIHPGRAGEPPLGLLLDRSGLHFDPATPSDLEQLLASHPLDDSALMrrarrai  137
            +ED+F+RS++ G  GEPPL+L++D  G+ +D++ PS LE+L+   + +++AL+ +AR A+
Sbjct  65   LEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKA-GNTALISQAREAM  123

Query  138  arLQDAHLSKYN---AYSPQAPVPDPGYVLVIDQARGDASVRASTPFEGTDHARFQEMLY  194
              +  +++SKYN   A+ ++ +      VLV+DQ+  D SV     +  ++   F  ML 
Sbjct  124  HTIVTGDMSKYNLAPAFVADES-ERTNIVLVVDQTFNDMSV----TYGNAGPHEFAAMLE  178

Query  195  YAQDEHPGARIIIKSHPEDRAGHRPGYYSAADAQGRVEILNTPVSPWALLEGAIAVYTVS  254
             A  E+P A I +K HP+   G + GY++   A  RV ++   VSP +LL     VY V+
Sbjct  179  AAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVT  238

Query  255  SQMGFEAILCGHKPRIFGQPFYAGWGLSEDEFP----ITRRQRSLTRAQLFAAAMILYPT  310
            SQ GFEA+L G     FGQP YA+WGL++D  P    ++ R+ S T  +LFAAA + Y  
Sbjct  239  SQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCR  298

Query  311  WYSPHHDRLCELEEVIGALEAETRAWQQDRAG--WIASGMRLWKRHPLQTFF-GRYRRLR  367
               P+ + + +L  V+  L+ + R   Q+R G  W A+G+ LWK   L+ F+     RL 
Sbjct  299  YIDPQTGEVSDLFTVLQWLQLQRRH-LQQRNGYLW-APGLTLWKSAILKPFLRTPTNRLS  356

Query  368  FSNSPKTAKASGRNWMIWAGRTSTGQSPGAH-------RVEDGFLRSRGLGADLIPPLSL  420
            FS    +A A     ++W+ +      + A+       R+EDGFLRS GLG+DL+PPLSL
Sbjct  357  FSRRCTAASAC----VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSL  412

Query  421  VVDRQGIYYDPHQPSDLEDLIAARATLTPEQQQRAETLTQRLVQDSLSKYNLGG--TVPD  478
            V+D++GIYYD+ +PSDLE L+  ++ LT  QQ RAE L QRLV+  LSKYNLG+  ++P 
Sbjct  413  VLDKRGIYYDATRPSDLEVLL-NHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPA  471

Query  479  LPEGHRVLVV-GQVADDASVRLGCEKIatnadllraaraanPGAVLIYKPHPDVEAGLRD  537
             + + +V++V GQV DDAS++ G   I +N +LLR+ R  NP A ++YKPHPDV  G R 
Sbjct  472  KAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRK  531

Query  538  GSIAAE---QLADVVVPDSDPMALLDMVHDVWTMTSLMGFEALLRGVKVTTVGAPFYAGW  594
            G I+AE   +LAD    D+D +  ++  ++V TMTSL GFEALL+G  V   G PFYAGW
Sbjct  532  GDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGW  591

Query  595  GLTTDLGAVPVARRQARPSLMGLVHAALIDYPRYMDPVSGLPCQVE  640
            GLT D      +RR+ + +L +L+  ALI YP Y++P    P  VE
Sbjct  592  GLTVD--EHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVE  635

94) kpsC in NC_014625


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  298 bits (1117),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 254/615 (42%), Positives = 385/615 (63%), Gaps = 34/615 (5%)

Query  13   PSGTDGVVVWGQRPVSARGRWVARRSSAPLITVEDAFLRSVLTGRAGEPPQGLLIDPLGL  72
            P   +++ VWG+RP +A+   +A+ ++ P+I +ED+F+RS+  G  GEPP +L++D  G+
Sbjct  33   PQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGI  92

Query  73   YYDPSQPSTLENLLSTVTLTADEEaraarliarlnrlqlSKYN--ATLDDLPPPAPGYVL  130
            YYD+S+PS+LE+L+   +  +   ++A   +  +   ++SKYN  +++    +     VL
Sbjct  93   YYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVL  152

Query  131  IVDQTAGDASVRASGGDRAAFLAMLQAARDENPGARILIRSHPETTAGQRGGHF---RAD  187
            +VDQT  D SV  + ++   F AML+AA  ENP A I ++ HP+   G++ G F   RA 
Sbjct  153  VVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRAT  212

Query  188  DLLRGEAFIDAPYPPQMLLSGAAQVYTLSSQLGFEAILNGRRPAVFGQPFYAGWGLsddr  247
            + +R   +I    +PQ LL   ++VY ++SQ GFEA+L G+  + FGQP YA+WGL+DDR
Sbjct  213  QRVR---LIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDR  269

Query  248  spppr--rGR--ALSVTQLFTAAMIQFPKWYDPHTDQLCEIETVIDNLEAQRRAWREDRM  303
             P +    +R  + ++ +LF+AA +++ +  DP+T+++ ++ TV++ L+ QRR   ++R 
Sbjct  270  HPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHL-QQRN  328

Query  304  GWL-ALGMRLWKRGPLQRAFGRYRGIRF---KPPAGARRVMVWANRYQPE-MGDAV----  354
            G L A G+ LWK + L ++F R    R+   +  ++A   +VW+ + + +  ++A     
Sbjct  329  GYLWAPGLTLWKSAIL-KPFLRTPTNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSL  387

Query  355  ---RVEDGFLRSRGLGAELVPPASLVLDDLGIYYDPTRPSRLETLIE-AAITPDDHARAT  410
               R+EDGFLRS GLG++L+PP SLVLD  GIYYD+TRPS LE L++ + +T  ++ RA 
Sbjct  388  PLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAE  447

Query  411  ALIATLNASGISKYNLGNS-ALPDLPPGRR-ILVPGQVEDDASIRLGAGDIRTNAGLLRA  468
             L   L  S +SKYNLG   +LP  + +++ ILVPGQVEDDASI+ G+  I++N  LLR+
Sbjct  448  KLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRT  507

Query  469  VRAANPDAVILWKPHPDVEAGLRPGAV-ADPDADVI-LRGVDAAV--AISAADEVWTMTS  524
            VR  NP+A I+ KPHPDV  G R G + A+  A++   +++DA +   I  ADEV TMTS
Sbjct  508  VRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTS  567

Query  525  TLGFEALLRGKAVTCYGAPFYAGWGLTQDLGSVPARRSARPDLATLAHAVLIAYPRYFHP  584
              GFEALL+GK V CYG PFYAGWGLT D    P RR  +  LA L    LI YP Y+HP
Sbjct  568  LSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCP-RRERKLTLADLIYQALIVYPTYIHP  626

Query  585  KSGLPCPPEAIAAWL  599
                P   E  A  L
Sbjct  627  TRLQPITVEEAAEYL  641


 Score =  110 bits (399),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 96/258 (38%), Positives = 153/258 (60%), Gaps = 11/258 (4%)

Query  353  AVRVEDGFLRSRGLGAELVPPASLVLDDLGIYYDPTRPSRLETLIEAAITPDD-HARATA  411
             +R+EDGF+RS +LG +  PP SLV+DD GIYYD+++PS LE L++         ++A  
Sbjct  62   VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQARE  121

Query  412  LIATLNASGISKYNLGNSALPDLP-PGRRILVPGQVEDDASIRLGAGDIRTNAGLLRAVR  470
             + T+ ++++SKYNL+ + ++D +     +LV +Q  +D S+  G ++ +  A++L A  
Sbjct  122  AMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  471  AANPDAVILW-KPHPDVEAGLRPGAVADPDADVILRGVDAAVA----ISAADEVWTMTST  525
            A NP+A I W K HPDV  G + G  AD  A   +R +   V+    +     V  +TS 
Sbjct  182  AENPQAEI-WVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  526  LGFEALLRGKAVTCYGAPFYAGWGLTQD---LGSVPARRSARPDLATLAHAVLIAYPRYF  582
             GFEALL GK+VTC+G P YA+WGLT+D    +++ + R + + L  L  A  + Y RY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  583  HPKSGLPCPPEAIAAWLQ  600
            +P++G      ++  WLQ
Sbjct  301  DPQTGEVSDLFTVLQWLQ  318


 Score =  108 bits (392),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 102/294 (35%), Positives = 177/294 (61%), Gaps = 13/294 (4%)

Query  12   WPSGTDGVVVWGQRPVSARGRW--VARRSSAPLITVEDAFLRSVLTGRAGEPPQGLLIDP  69
            + +++ + VVWG   V +  +W   A+R S PL  +ED+FLRS   G    PP +L++D 
Sbjct  360  RCTAASACVVWG---VKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDK  416

Query  70   LGLYYDPSQPSTLENLLSTVTLTADEEaraarliarlnrlqlSKYNATLD-DLPPPAPG-  127
             G+YYD+++PS LE LL+   LT  ++ RA +L  RL   +LSKYN   D  LP+ A + 
Sbjct  417  RGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDK  476

Query  128  -YVLIVDQTAGDASVRASGGDRAAFLAMLQAARDENPGARILIRSHPETTAGQRGGHFRA  186
              +L+ +Q  +DAS++++     + L +L++ R+ NP A I+ ++HP+   G+R G++ A
Sbjct  477  KVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPA  536

Query  187  DDLLRGEAFIDAPYPPQML--LSGAAQVYTLSSQLGFEAILNGRRPAVFGQPFYAGWGLs  244
            +  L +E     +  ++++  +  A +V T++S  GFEA+L+G++   +G PFYAGWGL+
Sbjct  537  E--LTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLT  594

Query  245  ddrsppprrGRALSVTQLFTAAMIQFPKWYDPHTDQLCEIETVIDNL-EAQRRA  297
             D    PRR R L++++L+  A+I +P   +P   Q   +E   + L ++ R++
Sbjct  595  VDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKP  648

95) kpsC in NC_017384


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  298 bits (1115),  Expect = 9e-82, Method: Compositional matrix adjust.
 Identities = 254/615 (42%), Positives = 385/615 (63%), Gaps = 34/615 (5%)

Query  32   PSGTDGVVVWGQRPVSARGRWVARRSSAPLITVEDAFLRSVLTGRAGEPPQGLLIDPLGL  91
            P   +++ VWG+RP +A+   +A+ ++ P+I +ED+F+RS+  G  GEPP +L++D  G+
Sbjct  33   PQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGI  92

Query  92   YYDPSQPSTLENLLSTVTLTADEEaraarliarlnrlqlSKYN--ATLDDLPPPAPGYVL  149
            YYD+S+PS+LE+L+   +  +   ++A   +  +   ++SKYN  +++    +     VL
Sbjct  93   YYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVL  152

Query  150  IVDQTAGDASVRASGGDRAAFLAMLQAARDENPGARILIRSHPETTAGQRGGHF---RAD  206
            +VDQT  D SV  + ++   F AML+AA  ENP A I ++ HP+   G++ G F   RA 
Sbjct  153  VVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRAT  212

Query  207  DLLRGEAFIDAPYPPQMLLSGAAQVYTLSSQLGFEAILNGRRPAVFGQPFYAGWGLsddr  266
            + +R   +I    +PQ LL   ++VY ++SQ GFEA+L G+  + FGQP YA+WGL+DDR
Sbjct  213  QRVR---LIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDR  269

Query  267  spppr--rGR--ALSVTQLFTAAMIQFPKWYDPHTDQLCEIETVIDNLEAQRRAWREDRM  322
             P +    +R  + ++ +LF+AA +++ +  DP+T+++ ++ TV++ L+ QRR   ++R 
Sbjct  270  HPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHL-QQRN  328

Query  323  GWL-ALGMRLWKRGPLQRAFGRYRGIRF---KPPAGARRVMVWANRYQPE-MGDAV----  373
            G L A G+ LWK + L ++F R    R+   +  ++A   +VW+ + + +  ++A     
Sbjct  329  GYLWAPGLTLWKSAIL-KPFLRTPTNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSL  387

Query  374  ---RVEDGFLRSRGLGAELVPPASLVLDDLGIYYDPTRPSRLETLIE-AAITPDDHARAT  429
               R+EDGFLRS GLG++L+PP SLVLD  GIYYD+TRPS LE L++ + +T  ++ RA 
Sbjct  388  PLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAE  447

Query  430  ALIATLNASGISKYNLGNS-ALPDLPPGRR-ILVPGQVEDDASIRLGAGDIRTNAGLLRA  487
             L   L  S +SKYNLG   +LP  + +++ ILVPGQVEDDASI+ G+  I++N  LLR+
Sbjct  448  KLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRT  507

Query  488  VRAANPDAVILWKPHPDVEAGLRPGAV-ADPDADVI-LRGVDAAV--AISAADEVWTMTS  543
            VR  NP+A I+ KPHPDV  G R G + A+  A++   +++DA +   I  ADEV TMTS
Sbjct  508  VRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTS  567

Query  544  TLGFEALLRGKAVTCYGAPFYAGWGLTQDLGSVPARRSARPDLATLAHAVLIAYPRYFHP  603
              GFEALL+GK V CYG PFYAGWGLT D    P RR  +  LA L    LI YP Y+HP
Sbjct  568  LSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCP-RRERKLTLADLIYQALIVYPTYIHP  626

Query  604  KSGLPCPPEAIAAWL  618
                P   E  A  L
Sbjct  627  TRLQPITVEEAAEYL  641


 Score =  110 bits (399),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 96/258 (38%), Positives = 153/258 (60%), Gaps = 11/258 (4%)

Query  372  AVRVEDGFLRSRGLGAELVPPASLVLDDLGIYYDPTRPSRLETLIEAAITPDD-HARATA  430
             +R+EDGF+RS +LG +  PP SLV+DD GIYYD+++PS LE L++         ++A  
Sbjct  62   VIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQARE  121

Query  431  LIATLNASGISKYNLGNSALPDLPP-GRRILVPGQVEDDASIRLGAGDIRTNAGLLRAVR  489
             + T+ ++++SKYNL+ + ++D +     +LV +Q  +D S+  G ++ +  A++L A  
Sbjct  122  AMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAM  181

Query  490  AANPDAVILW-KPHPDVEAGLRPGAVADPDADVILRGVDAAVA----ISAADEVWTMTST  544
            A NP+A I W K HPDV  G + G  AD  A   +R +   V+    +     V  +TS 
Sbjct  182  AENPQAEI-WVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  545  LGFEALLRGKAVTCYGAPFYAGWGLTQD---LGSVPARRSARPDLATLAHAVLIAYPRYF  601
             GFEALL GK+VTC+G P YA+WGLT+D    +++ + R + + L  L  A  + Y RY+
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI  300

Query  602  HPKSGLPCPPEAIAAWLQ  619
            +P++G      ++  WLQ
Sbjct  301  DPQTGEVSDLFTVLQWLQ  318


 Score =  108 bits (392),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 102/294 (35%), Positives = 177/294 (61%), Gaps = 13/294 (4%)

Query  31   WPSGTDGVVVWGQRPVSARGRW--VARRSSAPLITVEDAFLRSVLTGRAGEPPQGLLIDP  88
            + +++ + VVWG   V +  +W   A+R S PL  +ED+FLRS   G    PP +L++D 
Sbjct  360  RCTAASACVVWG---VKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDK  416

Query  89   LGLYYDPSQPSTLENLLSTVTLTADEEaraarliarlnrlqlSKYNATLD-DLPPPAPG-  146
             G+YYD+++PS LE LL+   LT  ++ RA +L  RL   +LSKYN   D  LP+ A + 
Sbjct  417  RGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDK  476

Query  147  -YVLIVDQTAGDASVRASGGDRAAFLAMLQAARDENPGARILIRSHPETTAGQRGGHFRA  205
              +L+ +Q  +DAS++++     + L +L++ R+ NP A I+ ++HP+   G+R G++ A
Sbjct  477  KVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPA  536

Query  206  DDLLRGEAFIDAPYPPQML--LSGAAQVYTLSSQLGFEAILNGRRPAVFGQPFYAGWGLs  263
            +  L +E     +  ++++  +  A +V T++S  GFEA+L+G++   +G PFYAGWGL+
Sbjct  537  E--LTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLT  594

Query  264  ddrsppprrGRALSVTQLFTAAMIQFPKWYDPHTDQLCEIETVIDNL-EAQRRA  316
             D    PRR R L++++L+  A+I +P   +P   Q   +E   + L ++ R++
Sbjct  595  VDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKP  648

96) wcbA in NC_017223


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  297 bits (1111),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 256/582 (44%), Positives = 368/582 (64%), Gaps = 26/582 (4%)

Query  60   GVPYIALEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIED  118
            G P I LEDGF+RS++ G +  PPLSLVVD  GIYYDA++ S LE  L   ++   ++  
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALE-KLVQDKAGNTALIS  117

Query  119  AVPEAMELVRERRLSKYNQGCFLATGVPADGRRR---VLVVDQTEGDMSVTLGCaeaatf  175
               EAM+ +    +SKYN    LA +  AD   R   VLVVDQT  DMSVT G A +  F
Sbjct  118  QAREAMHTIVTGDMSKYN----LAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEF  173

Query  176  eamlaaaraeSPGALICVKTHPEVAAGDKSGYLSRVTDDADTVALRHDMNPLALLEQMDR  235
             AML AA AE+P A I VK HP+V  G K+GY++ +        + ++++P +LL ++ R
Sbjct  174  AAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSR  233

Query  236  VYVVSSQMGFEALMLDKPVTCFGMPWYAGWGVTDDRQR-----CERRGRARSVEELFAGA  290
            VYVV+SQ GFEAL+ +KPVTCFG PWYA+WG+TDDR+        RRG A ++EELFA+A
Sbjct  234  VYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAA  292

Query  291  YFHYTRYLDPVLHRRGTIFDVIDWLTRQRDMAQRLPSRVIGVGMRRWkaaalapmlalkp  350
            Y++Y RY+DP     + +F V++WL  QR   Q+  + + + G+  WK+A L P L    
Sbjct  293  YLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPT  352

Query  351  GQAVFaadaarardlgqaagdalVHWGARAPAGVAELAEQSGCAVLAVEDGFLRSVGLGS  410
             +  F+   + A           V WG ++       A++ + ++  +EDGFLRS GLGS
Sbjct  353  NRLSFSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGS  404

Query  411  DLIRPLSLALDGRGIYFDPRQPSDLEHELNRGGFSPGELASAARIRALVVAHGITKYNVA  470
            DL+ PLSL LD RGIY+D+ +PSDLE  LN++ ++ ++   A ++R  +V   ++KYN++
Sbjct  405  DLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG  464

Query  471  QPQPADWPARGREIVLVPGQVEDDASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPD  530
               +    A+++ ++LVPGQVEDDAS++ G   +++NL+LL + R  +P+AYIVYKPHPD
Sbjct  465  ADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPD  524

Query  531  VVSrnrrgrvalrearrHADHVESALSVVSCIQACDVVHTMTSLTGFDALLRGKRVVTYG  590
            V+  NR+G ++   +   AD       ++ CIQ  D VHTMTSL+GF+ALL+GK+V  YG
Sbjct  525  VLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYG  584

Query  591  KPFYAGWGLTEDRAADWPRDRRTRRLSLDELVAGTLLRYPLY  632
             PFYAGWGLT D   +    RR R+L+L +L+  +L+ YP Y
Sbjct  585  LPFYAGWGLTVD---EHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  117 bits (427),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 95/239 (40%), Positives = 143/239 (60%), Gaps = 6/239 (2%)

Query  66   LEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAM  124
            +EDGFLRS G G ++ PPLSLV+D+ GIYYDATR S+LE LL  S+  L     A     
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  125  ELVRERRLSKYNQGCFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeamlaaara  184
             LV E +LSKYN G  ++    A +++ +LV +Q E+D S+  G     +   +L + R 
Sbjct  452  RLV-ESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRE  510

Query  185  eSPGALICVKTHPEVAAGDKSGYLSR--VTDDADTVALRHDMNPLALLEQMDRVYVVSSQ  242
             +P A I  K HP+V  G++ G ++    ++ AD  AL  D+  +  +++ D V  ++S 
Sbjct  511  RNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADI--IQCIQRADEVHTMTSL  568

Query  243  MGFEALMLDKPVTCFGMPWYAGWGVTDDRQRCERRGRARSVEELFAGAYFHYTRYLDPV  301
             GFEAL+ +K V C+G+P YAGWG+T D +RC RR R  ++ +L+  A + Y  Y++P 
Sbjct  569  SGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPT  627

97) wcbA in NC_002929


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  297 bits (1111),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 256/582 (44%), Positives = 368/582 (64%), Gaps = 26/582 (4%)

Query  60   GVPYIALEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIED  118
            G P I LEDGF+RS++ G +  PPLSLVVD  GIYYDA++ S LE  L   ++   ++  
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALE-KLVQDKAGNTALIS  117

Query  119  AVPEAMELVRERRLSKYNQGCFLATGVPADGRRR---VLVVDQTEGDMSVTLGCaeaatf  175
               EAM+ +    +SKYN    LA +  AD   R   VLVVDQT  DMSVT G A +  F
Sbjct  118  QAREAMHTIVTGDMSKYN----LAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEF  173

Query  176  eamlaaaraeSPGALICVKTHPEVAAGDKSGYLSRVTDDADTVALRHDMNPLALLEQMDR  235
             AML AA AE+P A I VK HP+V  G K+GY++ +        + ++++P +LL ++ R
Sbjct  174  AAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSR  233

Query  236  VYVVSSQMGFEALMLDKPVTCFGMPWYAGWGVTDDRQR-----CERRGRARSVEELFAGA  290
            VYVV+SQ GFEAL+ +KPVTCFG PWYA+WG+TDDR+        RRG A ++EELFA+A
Sbjct  234  VYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAA  292

Query  291  YFHYTRYLDPVLHRRGTIFDVIDWLTRQRDMAQRLPSRVIGVGMRRWkaaalapmlalkp  350
            Y++Y RY+DP     + +F V++WL  QR   Q+  + + + G+  WK+A L P L    
Sbjct  293  YLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPT  352

Query  351  GQAVFaadaarardlgqaagdalVHWGARAPAGVAELAEQSGCAVLAVEDGFLRSVGLGS  410
             +  F+   + A           V WG ++       A++ + ++  +EDGFLRS GLGS
Sbjct  353  NRLSFSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGS  404

Query  411  DLIRPLSLALDGRGIYFDPRQPSDLEHELNRGGFSPGELASAARIRALVVAHGITKYNVA  470
            DL+ PLSL LD RGIY+D+ +PSDLE  LN++ ++ ++   A ++R  +V   ++KYN++
Sbjct  405  DLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG  464

Query  471  QPQPADWPARGREIVLVPGQVEDDASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPD  530
               +    A+++ ++LVPGQVEDDAS++ G   +++NL+LL + R  +P+AYIVYKPHPD
Sbjct  465  ADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPD  524

Query  531  VVSrnrrgrvalrearrHADHVESALSVVSCIQACDVVHTMTSLTGFDALLRGKRVVTYG  590
            V+  NR+G ++   +   AD       ++ CIQ  D VHTMTSL+GF+ALL+GK+V  YG
Sbjct  525  VLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYG  584

Query  591  KPFYAGWGLTEDRAADWPRDRRTRRLSLDELVAGTLLRYPLY  632
             PFYAGWGLT D   +    RR R+L+L +L+  +L+ YP Y
Sbjct  585  LPFYAGWGLTVD---EHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  117 bits (427),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 95/239 (40%), Positives = 143/239 (60%), Gaps = 6/239 (2%)

Query  66   LEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAM  124
            +EDGFLRS G G ++ PPLSLV+D+ GIYYDATR S+LE LL  S+  L     A     
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  125  ELVRERRLSKYNQGCFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeamlaaara  184
             LV E +LSKYN G  ++    A +++ +LV +Q E+D S+  G     +   +L + R 
Sbjct  452  RLV-ESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRE  510

Query  185  eSPGALICVKTHPEVAAGDKSGYLSR--VTDDADTVALRHDMNPLALLEQMDRVYVVSSQ  242
             +P A I  K HP+V  G++ G ++    ++ AD  AL  D+  +  +++ D V  ++S 
Sbjct  511  RNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADI--IQCIQRADEVHTMTSL  568

Query  243  MGFEALMLDKPVTCFGMPWYAGWGVTDDRQRCERRGRARSVEELFAGAYFHYTRYLDPV  301
             GFEAL+ +K V C+G+P YAGWG+T D +RC RR R  ++ +L+  A + Y  Y++P 
Sbjct  569  SGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPT  627

98) wcbA in NC_019382


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  294 bits (1103),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 254/580 (44%), Positives = 369/580 (64%), Gaps = 22/580 (3%)

Query  60   GVPYIALEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIED  118
            G P I LEDGF+RS++ G +  PPLSLVVD  GIYYDA++ S LE  L   ++   ++  
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALE-KLVQDKAGNTALIS  117

Query  119  AVPEAMELVRERRLSKYNQG-GFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfea  177
               EAM+ +    +SKYN + +F+A    ++    VLVVDQT  DMSVT G A +  F A
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADE--SERTNIVLVVDQTFNDMSVTYGNAGPHEFAA  175

Query  178  mlaaaraeNPGALICVKTHPEVAAGDKSGYLSRVTDDADTVALRHDMNPLALLEQMDRVY  237
            ML AA AENP A I VK HP+V  G K+GY++ +        + ++++P +LL ++ RVY
Sbjct  176  MLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVY  235

Query  238  VVSSQMGFEALMLDKPVTCFGMPWYAGWGVTDDRQR-----CERRGRARSVEELFAGAYF  292
            VV+SQ GFEAL+ +KPVTCFG PWYA+WG+TDDR+        RRG A ++EELFA+AY+
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYL  294

Query  293  HYTRYLDPVLHRRGTIFDVIDWLTRQRDMAQRLPSRVIGVGMRRWkaaalapmlalkpGQ  352
            +Y RY+DP     + +F V++WL  QR   Q+  + + + G+  WK+A L P L     +
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  353  avfaadaarardlrpaagdaLVHWGARAPAGVAELAEQSGCAVLAVEDGFLRSVGLGSDL  412
              F+   + A           V WG ++       A++ + ++  +EDGFLRS GLGSDL
Sbjct  355  LSFSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  413  IRPLSLALDGRGIYFDPRQPSDLEHELNRGGFSPGELASAARIRALVVAHGITKYNVAQP  472
            + PLSL LD RGIY+D+ +PSDLE  LN++ ++ ++   A ++R  +V   ++KYN++  
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGAD  466

Query  473  QPADWPARGREIVLVPGQVEDDASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPDVV  532
             +    A+++ ++LVPGQVEDDAS++ G   +++NL+LL + R  +P+AYIVYKPHPDV+
Sbjct  467  FSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVL  526

Query  533  SrnrrgrvalrearrHADHVESALSVVSCIQACDVVHTMTSLTGFDALLRGKRVVTYGKP  592
              NR+G ++   +   AD       ++ CIQ  D VHTMTSL+GF+ALL+GK+V  YG P
Sbjct  527  VGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLP  586

Query  593  FYAGWGLTEDRAADWPRGRRTRRLSLDELVAGTLLRYPLY  632
            FYAGWGLT D   +    RR R+L+L +L+  +L+ YP Y
Sbjct  587  FYAGWGLTVD---EHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  118 bits (432),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 96/239 (41%), Positives = 144/239 (61%), Gaps = 6/239 (2%)

Query  66   LEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAM  124
            +EDGFLRS G G ++ PPLSLV+D+ GIYYDATR S+LE LL  S+  L     A     
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  125  ELVRERRLSKYNQGGFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeamlaaara  184
             LV E +LSKYN G+ ++    A +++ +LV +Q E+D S+  G     +   +L + R 
Sbjct  452  RLV-ESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRE  510

Query  185  eNPGALICVKTHPEVAAGDKSGYLSR--VTDDADTVALRHDMNPLALLEQMDRVYVVSSQ  242
             NP A I  K HP+V  G++ G ++    ++ AD  AL  D+  +  +++ D V  ++S 
Sbjct  511  RNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADI--IQCIQRADEVHTMTSL  568

Query  243  MGFEALMLDKPVTCFGMPWYAGWGVTDDRQRCERRGRARSVEELFAGAYFHYTRYLDPV  301
             GFEAL+ +K V C+G+P YAGWG+T D +RC RR R  ++ +L+  A + Y  Y++P 
Sbjct  569  SGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPT  627

99) wcbA in NC_002927


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  294 bits (1103),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 254/580 (44%), Positives = 370/580 (64%), Gaps = 22/580 (3%)

Query  60   GVPYIALEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIED  118
            G P I LEDGF+RS++ G +  PPLSLVVD  GIYYDA++ S LE  L   ++   ++  
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALE-KLVQDKAGNTALIS  117

Query  119  AVPEAMELVRERRLSKYNQG-GFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfea  177
               EAM+ +    +SKYN + +F+A    ++    VLVVDQT  DMSVT G A +  F A
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADE--SERTNIVLVVDQTFNDMSVTYGNAGPHEFAA  175

Query  178  mlaaaraeNPGALICVKTHPEVAAGDKSGYLSRVTDDADTVALRHDMNPLALLEQMDRVY  237
            ML AA AENP A I VK HP+V  G K+GY++ +        + ++++P +LL ++ RVY
Sbjct  176  MLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVY  235

Query  238  VVSSQMGFEALMLDKPVTCFGMPWYAGWGVTDDRQR-----CERRGRARSVEELFAGAYF  292
            VV+SQ GFEAL+ +KPVTCFG PWYA+WG+TDDR+        RRG A ++EELFA+AY+
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYL  294

Query  293  HYTRYLDPVLHRRGTIFDVIDWLTRQRDMAQRLPSRVIGVGMRRWkaaalapilalkpGQ  352
            +Y RY+DP     + +F V++WL  QR   Q+  + + + G+  WK+A L P+L     +
Sbjct  295  RYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNR  354

Query  353  avfaadaarardlrpaagdaLVHWGARAPAGVAELAEQSGCAVLAVEDGFLRSVGLGSDL  412
              F+   + A           V WG ++       A++ + ++  +EDGFLRS GLGSDL
Sbjct  355  LSFSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDL  406

Query  413  IRPLSLALDGRGIYFDPRQPSDLEHELNRGGFSPGELASAARIRALVVAHGITKYNVAQP  472
            + PLSL LD RGIY+D+ +PSDLE  LN++ ++ ++   A ++R  +V   ++KYN++  
Sbjct  407  LPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGAD  466

Query  473  QPADWPARGREIVLVPGQVEDDASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPDVV  532
             +    A+++ ++LVPGQVEDDAS++ G   +++NL+LL + R  +P+AYIVYKPHPDV+
Sbjct  467  FSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVL  526

Query  533  SrnrrgrvalrearrHADHVESALSVVSCIQACDVVHTMTSLTGFDALLRGKRVVTYGKP  592
              NR+G ++   +   AD       ++ CIQ  D VHTMTSL+GF+ALL+GK+V  YG P
Sbjct  527  VGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLP  586

Query  593  FYAGWGLTEDRAADWPRGRRTRRLSLDELVAGTLLRYPLY  632
            FYAGWGLT D   +    RR R+L+L +L+  +L+ YP Y
Sbjct  587  FYAGWGLTVD---EHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  118 bits (432),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 96/239 (41%), Positives = 144/239 (61%), Gaps = 6/239 (2%)

Query  66   LEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAM  124
            +EDGFLRS G G ++ PPLSLV+D+ GIYYDATR S+LE LL  S+  L     A     
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  125  ELVRERRLSKYNQGGFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeamlaaara  184
             LV E +LSKYN G+ ++    A +++ +LV +Q E+D S+  G     +   +L + R 
Sbjct  452  RLV-ESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRE  510

Query  185  eNPGALICVKTHPEVAAGDKSGYLSR--VTDDADTVALRHDMNPLALLEQMDRVYVVSSQ  242
             NP A I  K HP+V  G++ G ++    ++ AD  AL  D+  +  +++ D V  ++S 
Sbjct  511  RNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADI--IQCIQRADEVHTMTSL  568

Query  243  MGFEALMLDKPVTCFGMPWYAGWGVTDDRQRCERRGRARSVEELFAGAYFHYTRYLDPV  301
             GFEAL+ +K V C+G+P YAGWG+T D +RC RR R  ++ +L+  A + Y  Y++P 
Sbjct  569  SGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPT  627

100) wcbA in NC_002928


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 252/579 (44%), Positives = 368/579 (64%), Gaps = 22/579 (3%)

Query  1    MPYIALEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDA  59
             P I LEDGF+RS++ G +  PPLSLVVD  GIYYDA++ S LE  L   ++   ++   
Sbjct  60   KPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALE-KLVQDKAGNTALISQ  118

Query  60   VPEAMELVRERRLSKYNHG-GFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeam  118
              EAM+ +    +SKYN + +F+A    ++    VLVVDQT  DMSVT G A +  F AM
Sbjct  119  AREAMHTIVTGDMSKYNLAPAFVADE--SERTNIVLVVDQTFNDMSVTYGNAGPHEFAAM  176

Query  119  laaaraeNPGALICVKTHPEVAAGDKSGYLSRVTDDADTLALRHDMNPLALLEQMDRVYV  178
            L AA AENP A I VK HP+V  G K+GY++ +        + ++++P +LL ++ RVYV
Sbjct  177  LEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYV  236

Query  179  VSSQMGFEALMLDKPVICFGMPWYAGWGVTDDRQR-----CERRGRARSVEELFAGAYFH  233
            V+SQ GFEAL+ +KPV CFG PWYA+WG+TDDR+        RRG A ++EELFA+AY++
Sbjct  237  VTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLR  295

Query  234  YTRYLDPVLHRRGTIFDVIDWLTRQRDMAQRLPSRVIGVGMRRWkaaalapmlalkpGQa  293
            Y RY+DP     + +F V++WL  QR   Q+  + + + G+  WK+A L P L     + 
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRL  355

Query  294  vfaadaarardlrpaagdaLVHWGARAPAGVAELAEQSGCAVLAVEDGFLRSVGLGSDLI  353
             F+   + A           V WG ++       A++ + ++  +EDGFLRS GLGSDL+
Sbjct  356  SFSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLL  407

Query  354  RPLSLALDGRGIYFDPRQPSDLEHELNRGGFSLGELASAARIRALVVAHGITKYNVAQPQ  413
             PLSL LD RGIY+D+ +PSDLE  LN++ ++L++   A ++R  +V   ++KYN++   
Sbjct  408  PPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADF  467

Query  414  PADWPARGREIVLVPGQVEDDASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPDVVS  473
            +    A+++ ++LVPGQVEDDAS++ G   +++NL+LL + R  +P+AYIVYKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  474  rnrrgrvalrearrHADHVESALSVVSCIQACDVVHTMTSLTGFDALLRDKRVVTYGKPF  533
             NR+G ++   +   AD       ++ CIQ  D VHTMTSL+GF+ALL++K+V  YG PF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  534  YAGWGLTEDRAADWPRDRRTRRLSLDELVAGTLLRYPLY  572
            YAGWGLT D   +    RR R+L+L +L+  +L+ YP Y
Sbjct  588  YAGWGLTVD---EHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  119 bits (434),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 100/272 (37%), Positives = 163/272 (60%), Gaps = 10/272 (3%)

Query  6    LEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAM  64
            +EDGFLRS G G ++ PPLSLV+D+ GIYYDATR S+LE LL  S+  L     A     
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  65   ELVRERRLSKYNHGGFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeamlaaara  124
             LV E +LSKYN G+ ++    A +++ +LV +Q E+D S+  G     +   +L + R 
Sbjct  452  RLV-ESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRE  510

Query  125  eNPGALICVKTHPEVAAGDKSGYLSRVTDDADTLALRHDMNPLAL--LEQMDRVYVVSSQ  182
             NP A I  K HP+V  G++ G ++  ++ +  LA  + +++  +  +++ D V  ++S 
Sbjct  511  RNPHAYIVYKPHPDVLVGNRKGDIP--AELTAELADYQALDADIIQCIQRADEVHTMTSL  568

Query  183  MGFEALMLDKPVICFGMPWYAGWGVTDDRQRCERRGRARSVEELFAGAYFHYTRYLDPVL  242
             GFEAL+ +K V C+G+P YAGWG+T D +RC RR R  ++ +L+  A + Y  Y++P  
Sbjct  569  SGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTR  628

Query  243  HRRGTIFDVIDWL--TRQRDM--AQRLPSRVI  270
             +  T+ +  + L  T ++ M  +++ ++RVI
Sbjct  629  LQPITVEEAAEYLIQTPRKPMFITRKKAGRVI  660


 Score = 89.4 bits (320),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 93/260 (36%), Positives = 156/260 (60%), Gaps = 5/260 (1%)

Query  316  WGARAPAGVA-ELAEQSGCAVLAVEDGFLRSVGLGSDLIRPLSLALDGRGIYFDPRQPSD  374
            WG R++A+ +  +A  +G +V+ +EDGF+RS++LG +   PLSL +D+ GIY+D+ +PS 
Sbjct  42   WGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSA  101

Query  375  LEHELNRGGFSLGELASAARIRALVVAHGITKYNVAQPQPADWPARGREIVLVPGQVEDD  434
            LE  ++  + + + ++ A      +V+ +++KYN+A +  AD + R  +IVLV +Q  +D
Sbjct  102  LEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERT-NIVLVVDQTFND  160

Query  435  ASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPDVVSrnrrgrvalrearrHADHVES  494
             SV  G    +    +L AA A +P+A I  K HPDV+  ++ G  A   A ++   +  
Sbjct  161  MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAE  220

Query  495  ALSVVSCIQACDVVHTMTSLTGFDALLRDKRVVTYGKPFYAGWGLTEDRAADWP--RDRR  552
             +S  S ++    V  +TS  GF+ALL +K V  +G+P YA+WGLT+DR ++ +    RR
Sbjct  221  NVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARR  280

Query  553  TRRLSLDELVAGTLLRYPLY  572
                +L+EL A++ LRY  Y
Sbjct  281  GSA-TLEELFAAAYLRYCRY  299

101) wcbA in NC_018518


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  293 bits (1097),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 256/582 (44%), Positives = 368/582 (64%), Gaps = 26/582 (4%)

Query  60   GVPYIALEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIED  118
            G P I LEDGF+RS++ G +  PPLSLVVD  GIYYDA++ S LE  L   ++   ++  
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALE-KLVQDKAGNTALIS  117

Query  119  AVPEAMELVRERRLSKYNQGCFLATGVPADGRRR---VLVVDQTEGDMSVTLGCaeaatf  175
               EAM+ +    +SKYN    LA +  AD   R   VLVVDQT  DMSVT G A +  F
Sbjct  118  QAREAMHTIVTGDMSKYN----LAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEF  173

Query  176  eamlaaaraeSPGALICVKTHPEVAAGDKSGYLSRVTDDADTVALRHDMNPLALLEQMDR  235
             AML AA AE+P A I VK HP+V  G K+GY++ +        + ++++P +LL ++ R
Sbjct  174  AAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSR  233

Query  236  VYVVSSQMGFEALMLDKPVTCFGMPWYAGWGVTDDRQR-----CERRGRARSVEELFAGA  290
            VYVV+SQ GFEAL+ +KPVTCFG PWYA+WG+TDDR+        RRG A ++EELFA+A
Sbjct  234  VYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAA  292

Query  291  YFHYTRYLDPVLHRRGTIFDVIDWLTRQRDMAQRLPSRVIGVGMRRWkaaalapmlalkp  350
            Y++Y RY+DP     + +F V++WL  QR   Q+  + + + G+  WK+A L P L    
Sbjct  293  YLRYCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPT  352

Query  351  GQavfaadaarardlrqaagdaLVHWGARAPAGVAELAEQSGCAVLAVEDGFLRSVGLGS  410
             +  F+   + A           V WG ++       A++ + ++  +EDGFLRS GLGS
Sbjct  353  NRLSFSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGS  404

Query  411  DLIRPLSLALDGRGIYFDPRQPSDLEHELNRGGFSPGELASAARIRALVVAHGITKYNVA  470
            DL+ PLSL LD RGIY+D+ +PSDLE  LN++ ++ ++   A ++R  +V   ++KYN++
Sbjct  405  DLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLG  464

Query  471  QPQPADWPARGREIVLVPGQVEDDASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPD  530
               +    A+++ ++LVPGQVEDDAS++ G   +++NL+LL + R  +P+AYIVYKPHPD
Sbjct  465  ADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPD  524

Query  531  VVSrnrrgrvalrearrHADHVESALSVVSCIQACDVVHTMTSLTGFDALLRGKRVVTYG  590
            V+  NR+G ++   +   AD       ++ CIQ  D VHTMTSL+GF+ALL+GK+V  YG
Sbjct  525  VLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYG  584

Query  591  KPFYAGWGLTEDRAADWPRDRRTRRLSLDELVAGTLLRYPLY  632
             PFYAGWGLT D   +    RR R+L+L +L+  +L+ YP Y
Sbjct  585  LPFYAGWGLTVD---EHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  117 bits (427),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 95/239 (40%), Positives = 143/239 (60%), Gaps = 6/239 (2%)

Query  66   LEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAM  124
            +EDGFLRS G G ++ PPLSLV+D+ GIYYDATR S+LE LL  S+  L     A     
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  125  ELVRERRLSKYNQGCFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeamlaaara  184
             LV E +LSKYN G  ++    A +++ +LV +Q E+D S+  G     +   +L + R 
Sbjct  452  RLV-ESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRE  510

Query  185  eSPGALICVKTHPEVAAGDKSGYLSR--VTDDADTVALRHDMNPLALLEQMDRVYVVSSQ  242
             +P A I  K HP+V  G++ G ++    ++ AD  AL  D+  +  +++ D V  ++S 
Sbjct  511  RNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADI--IQCIQRADEVHTMTSL  568

Query  243  MGFEALMLDKPVTCFGMPWYAGWGVTDDRQRCERRGRARSVEELFAGAYFHYTRYLDPV  301
             GFEAL+ +K V C+G+P YAGWG+T D +RC RR R  ++ +L+  A + Y  Y++P 
Sbjct  569  SGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPT  627

102) wcbA in NC_018829


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  284 bits (1062),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 250/579 (44%), Positives = 365/579 (64%), Gaps = 20/579 (3%)

Query  60   GVPYIALEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIED  118
            G P I LEDGF+RS++ G +  PPLSLVVD  GIYYDA++ S LE  L   ++   ++  
Sbjct  59   GKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALE-KLVQDKAGNTALIS  117

Query  119  AVPEAMELVRERRLSKYN-QGGFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfea  177
               EAM+ +    +SKYN   +F+A    ++    VLVVDQT  DMSVT G A +  F A
Sbjct  118  QAREAMHTIVTGDMSKYNLAPAFVADE--SERTNIVLVVDQTFNDMSVTYGNAGPHEFAA  175

Query  178  mlaaaraeNPGALICVKTHPEVAAGDKSGYLSRVADDADTVVLRHDMNPLALLEQMDRVY  237
            ML AA AENP A I VK HP+V  G K+GY++ +       ++ ++++P +LL ++ RVY
Sbjct  176  MLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVY  235

Query  238  VVSSQMGFEALMLGKPVACFGMPWYAGWGVTDDrqrcerrgr----ersveeLFAGAYFH  293
            VV+SQ GFEAL+ GKPV+CFG PWYA+WG+TDDR+             ++EELFA+AY++
Sbjct  236  VVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLR  295

Query  294  YTRYLDPVLHRRGTIFDVIDWLTRQRDMAQRLPSRVIGVGMRRWkaaalapmlalkpGQa  353
            Y RY+DP     + +F V++WL  QR   Q+  + + + G+  WK+A L P L     + 
Sbjct  296  YCRYIDPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRL  355

Query  354  vfaadaarardlrpaagdaLVHWGARAPAGVAELAEQSGCAVLAVEDGFLRSVGLGSDLI  413
             F+   + A           V WG ++       A++ + ++  +EDGFLRS GLGSDL+
Sbjct  356  SFSRRCTAASAC--------VVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLL  407

Query  414  RPLSLALDGRGIYFDPRQPSDLEHELNRGGFSPGELASAARIRALVVAHGITKYNVAQPQ  473
             PLSL LD RGIY+D+ +PSDLE  LN++ ++ ++   A ++R  +V   ++KYN++   
Sbjct  408  PPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADF  467

Query  474  PADWPARGREIVLVPGQVEDDASVRLGCDEVRTNldllaaaraaHPDAYIVYKPHPDVVS  533
            +    A+++ ++LVPGQVEDDAS++ G   +++NL+LL + R  +P+AYIVYKPHPDV+ 
Sbjct  468  SLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLV  527

Query  534  rnrrgrvalrearrHADHVESALSVVSCIQACDVVHTMTSLTGFDALLRGKRVVTYGKPF  593
             NR+G ++   +   AD       ++ CIQ  D VHTMTSL+GF+ALL+GK+V  YG PF
Sbjct  528  GNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPF  587

Query  594  YAGWGLTEDRAADWPRDRRTRRLSLDELVAGTLLRYPLY  632
            YAGWGLT D   +    RR R+L+L +L+  +L+ YP Y
Sbjct  588  YAGWGLTVD---EHRCPRRERKLTLADLIYQALIVYPTY  623


 Score =  101 bits (365),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 100/270 (38%), Positives = 157/270 (59%), Gaps = 6/270 (2%)

Query  66   LEDGFLRSFGTGRHF-PPLSLVVDRLGIYYDATRESELECLLASSRTLLDGIEDAVPEAM  124
            +EDGFLRS G G ++ PPLSLV+D+ GIYYDATR S+LE LL  S+  L     A     
Sbjct  392  MEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQ  451

Query  125  ELVRERRLSKYNQGGFLATGVPADGRRRVLVVDQTEGDMSVTLGCaeaatfeamlaaara  184
             LV E +LSKYN G+ ++    A +++ +LV +Q E+D S+  G     +   +L + R 
Sbjct  452  RLV-ESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELLRTVRE  510

Query  185  eNPGALICVKTHPEVAAGDKSGYLSRVADDADTVVLRHDMNPLALLEQMDRVYVVSSQMG  244
             NP A I  K HP+V  G++ G ++       +     D + +  +++ D V  ++S  G
Sbjct  511  RNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTMTSLSG  570

Query  245  FEALMLGKPVACFGMPWYAGWGVTDDrqrcerrgrersveeLFAGAYFHYTRYLDPVLHR  304
            FEAL+ GK V C+G+P YAGWG+T D +RC RR R  ++ +L+  A + Y  Y++P   +
Sbjct  571  FEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQ  630

Query  305  RGTIFDVIDWL--TRQRDM--AQRLPSRVI  330
              T+ +  + L  T ++ M  +++ ++RVI
Sbjct  631  PITVEEAAEYLIQTPRKPMFITRKKAGRVI  660

103) PPUBIRD1_3815 in NC_017530


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  283 bits (1058),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 244/563 (44%), Positives = 355/563 (64%), Gaps = 30/563 (5%)

Query  1    MGLGAD-EPPLSLIVDDVGVYYDASQPSRLEQLIATPLNAEQ--TQRALALRSLWQQQRV  57
            ++LG + EPPLSL+VDD G+YYDAS+PS LE+L+          +Q   A++++     +
Sbjct  73   LDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTI-VTGDM  131

Query  58   SKYNDAR--IELPALPADCVLVADQTCGDASLQ--GAGASDFRAMLEAALARYPHSTIVL  113
            SKYN A   +   +  ++ VLV DQT  D S+    AG+ +F AMLEAA+A  P++ I +
Sbjct  132  SKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWV  191

Query  114  KVHPDVVAGRKAGHFDLAALAGNPRVQVLAHNVHPADLLPRMRAVFVMTSQLGFDALLWD  173
            KVHPDV+ G+K+G F  A L +  RV+++A+NV P  LL ++  V+V+TSQ GF+ALL +
Sbjct  192  KVHPDVLEGKKTGYF--ADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAG  249

Query  174  VPVHTWGMPFYAGWGLTDDRLPAPS----RRKPVPLAQLIHASLVAYPRYVCPERGQPCT  229
             PV   G P YA+WGLTDDR P ++    RR +  L +L+ A+ + Y RY+ P+ G+   
Sbjct  250  KPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSD  309

Query  230  PEVLINWLGLQRRHRSVLPDTVQML---GFSRWKEPLANLFFNGAAIRFVNPEQPLAQDL  286
               +++WL LQRRH   L +    L   G++ WK ++ + F+  ++ R+  + +  A   
Sbjct  310  LFTVLQWLQLQRRH---LQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCTAASA  366

Query  287  PVVSWGCKHD----THLSAHPLPVNRVEDGFLRSVGLGAGKARPLSWVVDDLGIYYDATR  342
             VV WG K +    ++    +LP+ R+EDGFLRS GLG++   PLS V+D  GIYYDATR
Sbjct  367  CVV-WGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATR  425

Query  343  PSRLERILAEEPFDPQllarayalrlaicaaGLTKYNLPGA-SWQRPAHAQRVILVPGQV  401
            PS LE +L +  +      RA  LR  +  + L+KYNL +  S    A  ++VILVPGQV
Sbjct  426  PSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQV  485

Query  402  EGDASIRFGGNRIRSNLQLLRAVREQNPDAWVLYKPHPEVLAGTRARGDDEAQTVHWCDE  461
            E+DASI+ G   I+SNL+LLR+VRE+NP+A ++YKPHP+VL G R  +     T +  D 
Sbjct  486  EDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADY  545

Query  462  VIGDTPLQQLLEVVDELHVLTSQSGFEALLRGVPVTTYGQPFYAGWGLTRDMDLQAPVQA  521
               D+ + Q ++  DE+H +TS SGFEALL+G  V  YG PFYAGWGLT D + + P   
Sbjct  546  QALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVD-EHRCP---  601

Query  522  RRSRQLTLDQLVAGTLLLYPTYV  544
            RR R+LTL +L+  +L++YPTY+
Sbjct  602  RRERKLTLADLIYQALIVYPTYI  624


 Score =  119 bits (434),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 100/319 (32%), Positives = 182/319 (58%), Gaps = 15/319 (4%)

Query  259  WKEPLANLFFNGAAIRFVNPEQPLAQDLPVVS-WGCKHDTH-----LSAHPLPVNRVEDG  312
            W+ P  + F+  +  + ++  +P++Q++  ++ WG +  +        A   PV R+EDG
Sbjct  10   WRIPHLEKFLAQPCQK-LSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDG  68

Query  313  FLRSVGLGAGKARPLSWVVDDLGIYYDATRPSRLERILAEEPFDPQllarayalrlaica  372
            F+RS++LG     PLS VVDD GIYYDA++PS LE+++ + + +  L+++A     +I +
Sbjct  69   FVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVT  128

Query  373  aGLTKYNLPGASWQRPAHAQRVILVPGQVEGDASIRFG--GNRIRSNLQLLRAVREQNPD  430
            ++++KYNL+ A     ++   ++LV +Q   D S+ +G  G +  + +       + +++
Sbjct  129  GDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAE  188

Query  431  AWVLYKPHPEVLAGTRARGDDEAQTVHWCDEVIGDTPLQQLLEVVDELHVLTSQSGFEAL  490
             WV  K HP+VL G ++    + ++ ++   +  + + Q LL  V  + V+TSQ GFEAL
Sbjct  189  IWV--KVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEAL  246

Query  491  LRGVPVTTYGQPFYAGWGLTRDMDLQAPVQARRSRQLTLDQLVAGTLLLYPTYVSLVTNR  550
            L G PVT +GQP YA+WGLT D + Q+++ + R    TL++L A++ L Y  Y+    + 
Sbjct  247  LAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI----DP  302

Query  551  FTTAERTLYELQNWHALPQ  569
             T     L+ + +W  L +
Sbjct  303  QTGEVSDLFTVLQWLQLQR  321


 Score =  115 bits (420),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 98/238 (42%), Positives = 142/238 (60%), Gaps = 11/238 (4%)

Query  2    GLGADE-PPLSLIVDDVGVYYDASQPSRLEQLIA-TPLNAEQTQRALALRSLWQQQRVSK  59
            GLG+D  PPLSL++D  G+YYDA++PS LE L+  + L   Q  RA  LR    + ++SK
Sbjct  401  GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSK  460

Query  60   YN-DARIELPALPAD--CVLVADQTCGDASLQGAGASDFRAMLE---AALARYPHSTIVL  113
            YN +A + LPA + D   +LV++Q  +DAS++ +G+  +++ LE   +   R PH+ IV 
Sbjct  461  YNLGADFSLPAKAKDKKVILVPGQVEDDASIK-TGTVSIKSNLELLRTVRERNPHAYIVY  519

Query  114  KVHPDVVAGRKAGHFDLAALAGNPRVQVLAHNVHPADLLPRMRAVFVMTSQLGFDALLWD  173
            K HPDV+ G + G++     A  +  Q L  ++     + R   V  MTS  GF+ALL +
Sbjct  520  KPHPDVLVGNRKGDIPAELTAELADYQALDADIIQC--IQRADEVHTMTSLSGFEALLHG  577

Query  174  VPVHTWGMPFYAGWGLTDDRLPAPSRRKPVPLAQLIHASLVAYPRYVCPERGQPCTPE  231
              VH  G+PFYAGWGLT D    P R + + LA+LI  +L+ YP Y+ P R QP T E
Sbjct  578  KHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVE  635

104) BMA10247_2187 in NC_009080


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  273 bits (1020),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 196/487 (41%), Positives = 306/487 (63%), Gaps = 32/487 (6%)

Query  1    MLLIDERKYSQGIGAVATRNNRGAFERMIRAARAAHPDAEFWLARTRDRGSGVWLSASAA  60
            ++L+ ++ +++ ++          F  M+ AA A +P+AE+W+    D   G   ++  A
Sbjct  150  IVLVVDQTFND-MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKK-TGYFA  207

Query  61   DILPADIHRL-GEHESLCAALEHVDHVYTVGASEGMQALLAGRRVHVFGAPYYAGWGLTD  119
            D+ +++  RL +E+ S  + L HV +VY V +  G +ALLAG+ V  FG P YA+WGLTD
Sbjct  208  DLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTD  267

Query  120  D----AVQLPGRHARPTLAALFDVVFLRFARYLNPATHAPGRIDDLLDAIEWQNTVRRRF  175
            D    +  L++R++ +TL  LF   +LR+ RY++P T   G + DL+  ++W +  RR+ 
Sbjct  268  DRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQT---GEVSDLFTVLQWLQLQRRH-  323

Query  176  ADLRQVAGIRFQW------WKRPFATPYLTAGGGTLRWTRDASRLREGEHAALWGARGTN  229
              L+Q  G  + W      WK ++  P+L +    L  +R  +    +    +WG +G +
Sbjct  324  --LQQRNG--YLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCT---AASACVVWGVKGEQ  376

Query  230  D--LPPGTRVI---RIEDGFLHSTGLGSDHVAPCSQVIDRSGLYFDPSRPSDLTTILNET  284
            +    +  + +   R+EDGFL+S+GLGSD ++P S V+D+ G+Y+D++RPSDL  +LN++
Sbjct  377  QWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHS  436

Query  285  DFDDAELVRANRLRREIARLGLTKYNLGRRKPAWSPPPGKRVVLVPGQVADDASIRLGTR  344
            ++  A+ +RA++LR+ +    L+KYNLG   +  + + +K+V+LVPGQV DDASI+ GT 
Sbjct  437  QLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTV  496

Query  345  GITTAEDLLREVRARRPDAFIVYKPHPDVLSGNRRGAIEVNAWADLIE---QDADLISLI  401
            +I +  +LLR VR R P+A+IVYKPHPDVL GNR+G I  +  A+L +    DAD+I  I
Sbjct  497  SIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCI  556

Query  402  EVADEIHTLSSLSGFEALIRGKAVHTYGLPFYAGWGLTQDALAQPWRKRTLSLDMLTAGV  461
            + ADE+HT++SLSGFEAL++GK VH YGLPFYAGWGLT D    P+R R L+L  L    
Sbjct  557  QRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQA  616

Query  462  LLRYPVY  468
            L+ YP Y
Sbjct  617  LIVYPTY  623


 Score =  101 bits (367),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 95/295 (33%), Positives = 157/295 (54%), Gaps = 20/295 (6%)

Query  189  WKRPFATPYLTAGGGTLRWTRDASRLREGEHAALWGARGTNDLP------PGTRVIRIED  242
            W+ P    +L+     L   R  ++  E +  A+WG R +   P      +G  VIR+ED
Sbjct  10   WRIPHLEKFLAQPCQKLSLLRPVPQ--EVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLED  67

Query  243  GFLHSTGLGSDHVAPCSQVIDRSGLYFDPSRPSDLTTILNETDFDDAELVRANRLRREIA  302
            GF++S +LG +  +P S V+D  G+Y+D+S+PS L  ++++   + A + +A    + I 
Sbjct  68   GFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIV  127

Query  303  RLGLTKYNLGRRKPAWSPPPGKR--VVLVPGQVADDASIRLGTRGITTAEDLLREVRARR  360
              +++KYNL+   PA  +  + R  +VLV +Q  +D S+  G  G      +L    A  
Sbjct  128  TGDMSKYNLA---PAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAEN  184

Query  361  PDAFIVYKPHPDVLSGNRRG---AIEVNAWADLIEQDADLISLIEVADEIHTLSSLSGFE  417
            P+A I  K HPDVL G++ G    +    +  LI ++    SL+     +  ++S  GFE
Sbjct  185  PQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFE  244

Query  418  ALIRGKAVHTYGLPFYAGWGLTQDALAQ----PWRKRTLSLDMLTAGVLLRYPVY  468
            AL+ GK+V  +G P YA+WGLT+D  +Q    + R+ + +L+ L A+  LRY  Y
Sbjct  245  ALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRY  299

105) BMASAVP1_A0519 in NC_008785


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  273 bits (1020),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 196/487 (41%), Positives = 306/487 (63%), Gaps = 32/487 (6%)

Query  1    MLLIDERKYSQGIGAVATRNNRGAFERMIRAARAAHPDAEFWLARTRDRGSGVWLSASAA  60
            ++L+ ++ +++ ++          F  M+ AA A +P+AE+W+    D   G   ++  A
Sbjct  150  IVLVVDQTFND-MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKK-TGYFA  207

Query  61   DILPADIHRL-GEHESLCAALEHVDHVYTVGASEGMQALLAGRRVHVFGAPYYAGWGLTD  119
            D+ +++  RL +E+ S  + L HV +VY V +  G +ALLAG+ V  FG P YA+WGLTD
Sbjct  208  DLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTD  267

Query  120  D----AVQLPGRHARPTLAALFDVVFLRFARYLNPATHAPGRIDDLLDAIEWQNTVRRRF  175
            D    +  L++R++ +TL  LF   +LR+ RY++P T   G + DL+  ++W +  RR+ 
Sbjct  268  DRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQT---GEVSDLFTVLQWLQLQRRH-  323

Query  176  ADLRQVAGIRFQW------WKRPFATPYLTAGGGTLRWTRDASRLREGEHAALWGARGTN  229
              L+Q  G  + W      WK ++  P+L +    L  +R  +    +    +WG +G +
Sbjct  324  --LQQRNG--YLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCT---AASACVVWGVKGEQ  376

Query  230  D--LPPGTRVI---RIEDGFLHSTGLGSDHVAPCSQVIDRSGLYFDPSRPSDLTTILNET  284
            +    +  + +   R+EDGFL+S+GLGSD ++P S V+D+ G+Y+D++RPSDL  +LN++
Sbjct  377  QWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHS  436

Query  285  DFDDAELVRANRLRREIARLGLTKYNLGRRKPAWSPPPGKRVVLVPGQVADDASIRLGTR  344
            ++  A+ +RA++LR+ +    L+KYNLG   +  + + +K+V+LVPGQV DDASI+ GT 
Sbjct  437  QLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTV  496

Query  345  GITTAEDLLREVRARRPDAFIVYKPHPDVLSGNRRGAIEVNAWADLIE---QDADLISLI  401
            +I +  +LLR VR R P+A+IVYKPHPDVL GNR+G I  +  A+L +    DAD+I  I
Sbjct  497  SIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCI  556

Query  402  EVADEIHTLSSLSGFEALIRGKAVHTYGLPFYAGWGLTQDALAQPWRKRTLSLDMLTAGV  461
            + ADE+HT++SLSGFEAL++GK VH YGLPFYAGWGLT D    P+R R L+L  L    
Sbjct  557  QRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQA  616

Query  462  LLRYPVY  468
            L+ YP Y
Sbjct  617  LIVYPTY  623


 Score =  101 bits (367),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 95/295 (33%), Positives = 157/295 (54%), Gaps = 20/295 (6%)

Query  189  WKRPFATPYLTAGGGTLRWTRDASRLREGEHAALWGARGTNDLP------PGTRVIRIED  242
            W+ P    +L+     L   R  ++  E +  A+WG R +   P      +G  VIR+ED
Sbjct  10   WRIPHLEKFLAQPCQKLSLLRPVPQ--EVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLED  67

Query  243  GFLHSTGLGSDHVAPCSQVIDRSGLYFDPSRPSDLTTILNETDFDDAELVRANRLRREIA  302
            GF++S +LG +  +P S V+D  G+Y+D+S+PS L  ++++   + A + +A    + I 
Sbjct  68   GFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIV  127

Query  303  RLGLTKYNLGRRKPAWSPPPGKR--VVLVPGQVADDASIRLGTRGITTAEDLLREVRARR  360
              +++KYNL+   PA  +  + R  +VLV +Q  +D S+  G  G      +L    A  
Sbjct  128  TGDMSKYNLA---PAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAEN  184

Query  361  PDAFIVYKPHPDVLSGNRRG---AIEVNAWADLIEQDADLISLIEVADEIHTLSSLSGFE  417
            P+A I  K HPDVL G++ G    +    +  LI ++    SL+     +  ++S  GFE
Sbjct  185  PQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFE  244

Query  418  ALIRGKAVHTYGLPFYAGWGLTQDALAQ----PWRKRTLSLDMLTAGVLLRYPVY  468
            AL+ GK+V  +G P YA+WGLT+D  +Q    + R+ + +L+ L A+  LRY  Y
Sbjct  245  ALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRY  299

106) SYNW0399 in NC_005070


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  265 bits (990),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 260/619 (43%), Positives = 396/619 (64%), Gaps = 26/619 (4%)

Query  33   RDVEALLAWGRRPSARRVECLGRRWQLPVWHLEDGLLRSLAKG-RQHPPLALLVDDLGVH  91
            ++V+A+  WG+RPSA +   +++    PV +LEDG++RSL  G   +PPL+L+VDD G+ 
Sbjct  34   QEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIY  93

Query  92   FDATQPSRMEQQIQQPLTPSQ-HNRARELQQRWCAQRLSKLNPARE---SPAPAEPFVLV  147
            +DA++PS +E+ +Q+    +   ++ARE  +   +  +SK N A       +    +VLV
Sbjct  94   YDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLV  153

Query  148  VDQSAGDCSIGLGQAGPESFRCMLQEALRDQPDCLVVVKVHPDVIrgrarghfrrrDLQH  207
            VDQ+  D S+  G+AGP+ F  ML+ A+ ++P+  + VKVHPDV+ G+  G F   DL+ 
Sbjct  154  VDQTFNDMSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFA--DLRA  211

Query  208  P-RIRICADGLHPAALLEQALAVYVVTSQMGFEALLWGRTVHCFGMPFYAGWGLTHDRLP  266
              R+R+ A+ + P +LL +   VYVVTSQ GFEALL G+ V CFG P YA+WGLT+DR P
Sbjct  212  TQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCFGQPWYASWGLTDDRHP  271

Query  267  APV---RRVQMVPLEALVHAALVAGTRCVDPHHHQPCPIETLMDAIGLQRRLQGADPQRV  323
             +     R     LE L  AA +   R +DP+  +   + T+++ + LQRR    + Q+ 
Sbjct  272  QSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQRR----HLQQR  327

Query  324  EAF----GFTPWKQRSLKRFLAGSELRFRLPRALPGPRAEAVAVWGrrarprllatarqr  379
            +++    G+T WK   LK FL  +  R+ ++R      A A  VWG ++  +  A A+++
Sbjct  328  NGYLWAPGLTLWKSAILKPFLRTPTNRLSFSR--RCTAASACVVWGVKGEQQWRAEAQRK  385

Query  380  alPVLQVEDGFLRSVGLGADLIDPISWVVDRRGMYYDATESSDLEHRLATVHWNEAQLER  439
            +LP+ ++EDGFLRS GLG+DL+ P+S V+D+RG+YYDAT +SDLE  L   +   AQ  R
Sbjct  386  SLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMR  445

Query  440  AEALRQQLVEQAITKYNLSGD-GWQrpkggrrvvlvvgqvESDASIRYGAPGITTNLALL  498
            AE LRQ+LVE  ++KYNL++D +      +++V+LV GQVE DASI+ G+ +I +NL LL
Sbjct  446  AEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLELL  505

Query  499  EAVRAAEPEAFLIYKPHPDVVAGLCRSGEGEERAGQVCDCLLGDGSIHALFEQVDALHVL  558
             +VR  +P+A+++YKPHPDV+ G  +++   E ++++ D    D+ I   +++ D +H +
Sbjct  506  RTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRADEVHTM  565

Query  559  TSLAGFEALLRGVEVNCWGLPFYAGWGLTNDrlssprrgrplplaalvhaalIDYPRYVS  618
            TSL+GFEALL+G +V+C GLPFYAGWGLT D    PRR R L LA L+  ALI YP Y+ 
Sbjct  566  TSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYI-  624

Query  619  RHSGWF--ITPEQAIEELV  635
             H+ ++  IT E+A E L+
Sbjct  625  -HPTRLQPITVEEAAEYLI  642


 Score = 89.9 bits (322),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 96/268 (36%), Positives = 157/268 (59%), Gaps = 2/268 (0%)

Query  323  VEAFGFTPWKQRSLKRFLAGSELRFRLPRALPGPRAEAVAVWGr-rarprllatarqral  381
            +  ++   W+   L +FLA +  ++ L R++P    +A+AVWG+  + ++ +A A+  + 
Sbjct  2    IGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVP-QEVNAIAVWGHRPSAAKPVAIAKAAGK  60

Query  382  PVLQVEDGFLRSVGLGADLIDPISWVVDRRGMYYDATESSDLEHRLATVHWNEAQLERAE  441
            PV+++EDGF+RS++LG +   P+S VVD  G+YYDA+ +S LE  +     N A + +A 
Sbjct  61   PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR  120

Query  442  ALRQQLVEQAITKYNLSGDGWQrpkggrrvvlvvgqvESDASIRYGAPGITTNLALLEAV  501
               + +V   ++KYNL+            +VLVV+Q  +D S+ YG +G     A+LEA 
Sbjct  121  EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA  180

Query  502  RAAEPEAFLIYKPHPDVVAGLCRSGEGEERAGQVCDCLLGDGSIHALFEQVDALHVLTSL  561
             A +P+A +  K HPDV+ G   +  ++ RA Q    +  + S ++L+ +V  + V+TS 
Sbjct  181  MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ  240

Query  562  AGFEALLRGVEVNCWGLPFYAGWGLTND  589
             GFEALL G  V C G P YA+WGLT+D
Sbjct  241  YGFEALLAGKPVTCFGQPWYASWGLTDD  268

107) BTI_796 in NC_021173


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  250 bits (934),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 204/495 (42%), Positives = 311/495 (63%), Gaps = 22/495 (4%)

Query  128  APIAIDISARRTRVLLIDERRATSANVHARARDRSNDFEAMMQAARAAHPDAAFWMIRSG  187
            AP  +   + RT ++L+ ++     +V + +   +++F AM++AA A +P+A +W+    
Sbjct  137  APAFVADESERTNIVLVVDQTFNDMSV-TYGNAGPHEFAAMLEAAMAENPQAEIWVKVHP  195

Query  188  DAATGRWLS--ADSNALPDGVHRLAPPYSLADLLRHVDHVYVVDASEGMSALLAGVRTHV  245
            D   G+  +  AD  A  + V+ +A   S   LLRHV +VYVV +  G  ALLAG     
Sbjct  196  DVLEGKKTGYFADLRA-TQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTC  254

Query  246  FGTPYYAGWGLTDDRHT----LPGRDARPTLAALFDAVFVRIAHYLDPATHAPGSLSAAL  301
            FG P YA+WGLTDDRH     L++R + +TL  LF A ++R  +Y+DP T   + L + L
Sbjct  255  FGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVL  314

Query  302  DGIELQHAVAERFKDLERVAGVRFQRWKRPFATPFLAAGGGRLRWAHAPAAVRANECAAF  361
            + ++LQ+   ++ ++  + +G+ +  WK ++  PFL +   RL  ++  +A  A+ C   
Sbjct  315  QWLQLQRRHLQQRNGYLWAPGLTL--WKSAILKPFLRTPTNRLSFSRRCTA--ASACVV-  369

Query  362  WGARSAEGLAPGVAHV-----RIEDGFIHSLGLGSDMNAPYSQAIDRRGLYFDASRPSDL  416
            WG ++ +   +   +      R+EDGF++S GLGSD+ +P S  +D+RG+Y+DA+RPSDL
Sbjct  370  WGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDL  429

Query  417  TVLFNEADFTGaelaraaalrerIVRAGITKYNLGRRAPAWTRPAGRPVALVPGQVADDA  476
             VL+N++++T A+  RA  LR+R+V + ++KYNLG   +  +++ ++ V LVPGQV DDA
Sbjct  430  EVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDA  489

Query  477  SIRLGTRALGTADALLREVRARRPDAFIVYKPHPDVLSGNRDGLVDA---LRLADVVDAE  533
            SI+ GT ++ +   LLR VR R P+A+IVYKPHPDVL GNR G + A     LAD    +
Sbjct  490  SIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALD  549

Query  534  SDLLSLIEAADEVHTLSSLAGFDALLRGKTVYTYGLPFYAGWGLTRDALAPLPWRERALT  593
            +D++  I+ ADEVHT++SL+GF+ALL+GK V  YGLPFYAGWGLT D     P+RER LT
Sbjct  550  ADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC-PRRERKLT  608

Query  594  LDMLTAGALLRYPLY  608
            L  L   AL+ YP Y
Sbjct  609  LADLIYQALIVYPTY  623


 Score = 93.1 bits (334),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 101/297 (35%), Positives = 162/297 (55%), Gaps = 23/297 (7%)

Query  328  WKRPFATPFLAAGGGRLRWAHA-PAAVRANECAAFWGARSAEGLAPGVAH------VRIE  380
            W+ P    FLA    +L   ++ P  V A    A WG R++ + + ++A       +R+E
Sbjct  10   WRIPHLEKFLAQPCQKLSLLRPVPQEVNA---IAVWGHRPSAAKPVAIAKAAGKPVIRLE  66

Query  381  DGFIHSLGLGSDMNAPYSQAIDRRGLYFDASRPSDLTVLFNEADFTGaelaraaalrerI  440
            DGF++SL+LG + ++P S  +D  G+Y+DAS+PS L  L ++     A +++A    + I
Sbjct  67   DGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTI  126

Query  441  VRAGITKYNLGRRAPAWTRPAG--RPVALVPGQVADDASIRLGTRALGTADALLREVRAR  498
            V ++++KYNL   APA     +    + LV +Q  +D S+  G  +     A+L    A 
Sbjct  127  VTGDMSKYNL---APAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAE  183

Query  499  RPDAFIVYKPHPDVLSGNRDGLVDALRLAD---VVDAESDLLSLIEAADEVHTLSSLAGF  555
             P+A I  K HPDVL G++ G    LR ++   ++  +    SL+     V  ++S  GF
Sbjct  184  NPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGF  243

Query  556  DALLRGKTVYTYGLPFYAGWGLT--RDALAPL--PWRERALTLDMLTAGALLRYPLY  608
            +ALL GK V  +G P YA+WGLT  R++ ++L  ++R  A TL+ L A+A LRY  Y
Sbjct  244  EALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLRYCRY  299


 Score = 56.1 bits (193),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 42/178 (24%), Positives = 93/178 (53%), Gaps = 6/178 (3%)

Query  128  APIAIDISARRTRVLLIDERRATSANVHARARDRSNDFEAMMQAARAAHPDAAFWMIRSG  187
            A +++   A+  +V+L+  +    A++ + +    +++E ++++ R  +P+A +      
Sbjct  465  ADFSLPAKAKDKKVILVPGQVEDDASIKTGTVSIKSNLE-LLRTVRERNPHAYIVYKPHP  523

Query  188  DAATGRWLSADSNALPDGV---HRLAPPYSLADLLRHVDHVYVVDASEGMSALLAGVRTH  244
            D   G + +  +  L   +   + L +   + + +++ D+V  + +  G  ALL G + H
Sbjct  524  DVLVGNRKGDIPAELTAELADYQALDA--DIIQCIQRADEVHTMTSLSGFEALLHGKHVH  581

Query  245  VFGTPYYAGWGLTDDRHTLPGRDARPTLAALFDAVFVRIAHYLDPATHAPGSLSAALD  302
             +G P+YAGWGLT D H  P R+ + TLA L+   ++  + Y++P+   P ++  A +
Sbjct  582  CYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAE  639

108) BTH_I1325 in NC_007651


> NC_008563_P4|58|G57|117625250|YP_854335.1|Escherichia_coli_APEC_O1|+|61728..63755|kpsC|APECO1_3478|capsule 
polysaccharide 
export protein KpsC
Length=675

 Score =  244 bits (912),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 204/494 (42%), Positives = 310/494 (63%), Gaps = 20/494 (4%)

Query  128  APVAIDIATRRTRVLLIDERRTTSANVHASAHGRSNDFEAMMQAARAAHPDAAFWMIRSG  187
            AP  +   + RT ++L+ ++     +V  +  G +++F AM++AA A +P+A +W+    
Sbjct  137  APAFVADESERTNIVLVVDQTFNDMSVTYGNAG-PHEFAAMLEAAMAENPQAEIWVKVHP  195

Query  188  DVATGRWLSAASNA-LPHGVQLVAPPYSLADLLRHIDHVYVVDASEGMSALLAGVRTHVF  246
            DV  G+  +  ++    + V+L+A   S   LLRH+ +VYVV +  G  ALLAG     F
Sbjct  196  DVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGFEALLAGKPVTCF  255

Query  247  GTPYYAGWGLTDDRRA----LPGRGARPTLGALFEVVFVRIAHYLDPATHAPGSLSAVLD  302
            G P YA+WGLTDDR++    L++R + +TL  LF   ++R  +Y+DP T   + L +VL+
Sbjct  256  GQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQ  315

Query  303  GIELQHAVAQRFKDLERIVGVRFQRWKRPFATPFLAAGGGRLRWTRAPAAVRANECAAFW  362
             ++LQ+   Q+ ++  +  G+ +  WK ++  PFL +   RL  +R  +A  A+ C   W
Sbjct  316  WLQLQRRHLQQRNGYLWAPGLTL--WKSAILKPFLRTPTNRLSFSRRCTA--ASACVV-W  370

Query  363  GARSAQGLAPGVAHV-----RIEDGFIHSLGLGSDMNAPYSQAIDRRGLYFDASRPSDLT  417
            G ++ Q   +   +      R+EDGF++S GLGSD+ +P S  +D+RG+Y+DA+RPSDL 
Sbjct  371  GVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIYYDATRPSDLE  430

Query  418  TLFNEADFTDaelaraaalrerIVRHGITKYNLGRRAPAWTRPAGRPVALVPGQVADDAS  477
             L+N++++T A+  RA  LR+R+V   ++KYNLG   +  +++ ++ V LVPGQV DDAS
Sbjct  431  VLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVILVPGQVEDDAS  490

Query  478  IrlgtralatadallrEVRARRPDAFIVYKPHPDVLSGNRDGLVDAR---RLADVVDAES  534
            I+ GT ++ +   LLR VR R P+A+IVYKPHPDVL GNR G + A     LAD    ++
Sbjct  491  IKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDA  550

Query  535  DLLSLIEAADEVHTLSSLAGFDALLRGKTVYTYGLPFYAGWGLTRDALAPLPWRERALTL  594
            D++  I+ ADEVHT++SL+GF+ALL+GK V  YGLPFYAGWGLT D     P+RER LTL
Sbjct  551  DIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC-PRRERKLTL  609

Query  595  DMLTAGALLRYPLY  608
              L   AL+ YP Y
Sbjct  610  ADLIYQALIVYPTY  623


 Score = 89.4 bits (320),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 101/297 (35%), Positives = 160/297 (54%), Gaps = 23/297 (7%)

Query  328  WKRPFATPFLAAGGGRLRWTRA-PAAVRANECAAFWGARSAQGLAPGVAH------VRIE  380
            W+ P    FLA    +L   R+ P  V A    A WG R++ + + ++A       +R+E
Sbjct  10   WRIPHLEKFLAQPCQKLSLLRPVPQEVNA---IAVWGHRPSAAKPVAIAKAAGKPVIRLE  66

Query  381  DGFIHSLGLGSDMNAPYSQAIDRRGLYFDASRPSDLTTLFNEADFTDaelaraaalrerI  440
            DGF++SL+LG + ++P S  +D  G+Y+DAS+PS L  L ++     A +++A    + I
Sbjct  67   DGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTI  126

Query  441  VRHGITKYNLGRRAPAWTRPAG--RPVALVPGQVADDASIrlgtralatadallrEVRAR  498
            V  +++KYNL   APA     +    + LV +Q  +D S+  G  +     A+L    A 
Sbjct  127  VTGDMSKYNL---APAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAAMAE  183

Query  499  RPDAFIVYKPHPDVLSGNRDGLVDARRLAD---VVDAESDLLSLIEAADEVHTLSSLAGF  555
             P+A I  K HPDVL G++ G     R ++   ++  +    SL+     V  ++S  GF
Sbjct  184  NPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQYGF  243

Query  556  DALLRGKTVYTYGLPFYAGWGLT--RDALAPL--PWRERALTLDMLTAGALLRYPLY  608
            +ALL GK V  +G P YA+WGLT  R++ ++L  ++R  A TL+ L A+A LRY  Y
Sbjct  244  EALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSA-TLEELFAAAYLRYCRY  299