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PAthogenisity Island DataBase (PAI DB)

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Homologs of RL048 gene of AY273869

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PA14_59680
( YP_792958.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

9e-35

100

2) PADK2_23965
( YP_006484758.1 )

hypothetical protein

NC_018080
(Pseudomonas aeruginosa DK2)

2e-31

3) M062_05010
( YP_008131451.1 )

dTDP-D-glucose 4,6-dehydratase

NC_021577
(Pseudomonas aeruginosa RP73)

2e-31

4) PSPA7_4500
( YP_001349850.1 )

hypothetical protein

NC_009656
(Pseudomonas aeruginosa PA7)

7e-30

5) G655_23655
( YP_007711567.1 )

hypothetical protein

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-25

• Sequence Alignments

1) PA14_59680 in NC_008463


> AY273869|56|G47|32481660|AAP84174.1|Pseudomonas_aeruginosa_PA14|-|50087..50344|-|RL048|hypothetical 
protein
Length=85

 Score =  139 bits (511),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDESTLCELLVQMLPDHE  60
           MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDESTLCELLVQMLPDHE
Sbjct  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDESTLCELLVQMLPDHE  60

Query  61  VEQARKQVLELHAKGRLQAPASLKV  85
           VEQARKQVLELHAKGRLQAPASLKV
Sbjct  61  VEQARKQVLELHAKGRLQAPASLKV  85

2) PADK2_23965 in NC_018080


> AY273869|56|G47|32481660|AAP84174.1|Pseudomonas_aeruginosa_PA14|-|50087..50344|-|RL048|hypothetical 
protein
Length=85

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 81/89 (92%), Positives = 83/89 (94%), Gaps = 4/89 (4%)

Query  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSTALEDESTLCELLEQMLPDHE  60
           MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTS ALEDESTLCELL QMLPDHE
Sbjct  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDESTLCELLVQMLPDHE  60

Query  61  VEQARKQVLELHAKRRRPGRLHSPASLKV  89
           VEQARKQVLELHAK    GRL++PASLKV
Sbjct  61  VEQARKQVLELHAK----GRLQAPASLKV  85

3) M062_05010 in NC_021577


> AY273869|56|G47|32481660|AAP84174.1|Pseudomonas_aeruginosa_PA14|-|50087..50344|-|RL048|hypothetical 
protein
Length=85

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 81/89 (92%), Positives = 83/89 (94%), Gaps = 4/89 (4%)

Query  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSTALEDESTLCELLEQMLPDHE  60
           MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTS ALEDESTLCELL QMLPDHE
Sbjct  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDESTLCELLVQMLPDHE  60

Query  61  VEQARKQVLELHAKRRRPGRLHSPASLKV  89
           VEQARKQVLELHAK    GRL++PASLKV
Sbjct  61  VEQARKQVLELHAK----GRLQAPASLKV  85

4) PSPA7_4500 in NC_009656


> AY273869|56|G47|32481660|AAP84174.1|Pseudomonas_aeruginosa_PA14|-|50087..50344|-|RL048|hypothetical 
protein
Length=85

 Score =  123 bits (449),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 78/89 (88%), Positives = 83/89 (94%), Gaps = 4/89 (4%)

Query  1   MTTHLITLVIKQPSDAQARQLMYQGLLDLISRYGGEVASKALEDESTLCELLEQMLPDDE  60
           MTTHLITLVIKQPSDAQARQLMYQ LL+LISRYGGEV+SKALEDESTLCELL QMLPD+E
Sbjct  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDESTLCELLVQMLPDHE  60

Query  61  VEQARKQVLELHAKGRRPGRLQPAASLKV  89
           VEQARKQVLELHAK    GRLQ++ASLKV
Sbjct  61  VEQARKQVLELHAK----GRLQAPASLKV  85

5) G655_23655 in NC_020912


> AY273869|56|G47|32481660|AAP84174.1|Pseudomonas_aeruginosa_PA14|-|50087..50344|-|RL048|hypothetical 
protein
Length=85

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 81/89 (92%), Positives = 84/89 (95%), Gaps = 4/89 (4%)

Query  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKAledesslcelleQMLPDHE  60
           MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDES+LCELL QMLPDHE
Sbjct  1   MTTHLITLVIKQPSDAQARQLMYQELLGLISRYGGEVTSKALEDESTLCELLVQMLPDHE  60

Query  61  VEQARKQVLELHAKRRRPGRLHSPASLKV  89
           VEQARKQVLELHAK    GRL++PASLKV
Sbjct  61  VEQARKQVLELHAK----GRLQAPASLKV  85