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Homologs of SE0077 gene of NC_004461_R1

814

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE0077
( NP_763632.1 )

dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3

NC_004461
(Staphylococcus epidermidis ATCC 12228)

0.0

100

2) Bcell_3086
( YP_004096060.1 )

dihydrolipoamide dehydrogenase

NC_014829
(Bacillus cellulosilyticus DSM 2522)

0.0

3) BpOF4_20079
( YP_003428907.1 )

dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3

NC_013792
(Bacillus pseudofirmus OF4)

0.0

4) Bcell_2665
( YP_004095651.1 )

dihydrolipoamide dehydrogenase

NC_014829
(Bacillus cellulosilyticus DSM 2522)

7e-118

5) PM3016_5959
( YP_005315765.1 )

protein PdhD

NC_016935
(Paenibacillus mucilaginosus 3016)

1e-116

6) B2K_30290
( YP_006192709.1 )

dihydrolipoamide dehydrogenase

NC_017672
(Paenibacillus mucilaginosus K02)

1e-116

7) pdhD
( YP_004644737.1 )

protein PdhD

NC_015690
(Paenibacillus mucilaginosus KNP414)

1e-116

8) HBHAL_2811
( YP_006180433.1 )

dihydrolipoamide dehydrogenase

NC_017668
(Halobacillus halophilus DSM 2266)

2e-116

9) pdhD
( YP_002772776.1 )

dihydrolipoyl dehydrogenase

NC_012491
(Brevibacillus brevis NBRC 100599)

1e-114

10) GC56T3_2512
( YP_003672047.1 )

dihydrolipoamide dehydrogenase

NC_014206
(Geobacillus sp. C56-T3)

2e-114

11) pdhD
( YP_007401289.1 )

dihydrolipoyl dehydrogenase

NC_020210
(Geobacillus sp. GHH01)

2e-114

12) GYMC52_0961
( YP_004131575.1 )

dihydrolipoamide dehydrogenase

NC_014915
(Geobacillus sp. Y412MC52)

2e-114

13) GYMC61_1835
( YP_003252941.1 )

dihydrolipoamide dehydrogenase

NC_013411
(Geobacillus sp. Y412MC61)

2e-114

14) GK1061
( YP_146914.1 )

dihydrolipoamide dehydrogenase

NC_006510
(Geobacillus kaustophilus HTA426)

3e-114

15) GTCCBUS3UF5_12380
( YP_004981652.1 )

Dihydrolipoyl dehydrogenase

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

3e-114

16) pdhD
( YP_005130148.1 )

dihydrolipoamide dehydrogenase

NC_016784
(Bacillus amyloliquefaciens CAU B946)

5e-114

17) KSO_012135
( YP_007445799.1 )

dihydrolipoamide dehydrogenase

NC_020272
(Bacillus amyloliquefaciens IT-45)

5e-114

18) B938_07525
( YP_007186199.1 )

dihydrolipoamide dehydrogenase

NC_019842
(Bacillus amyloliquefaciens AS43.3)

5e-114

19) pdhD
( YP_001421039.1 )

dihydrolipoamide dehydrogenase

NC_009725
(Bacillus amyloliquefaciens FZB42)

5e-114

20) pdhD
( YP_008412422.1 )

dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes

NC_022075
(Bacillus amyloliquefaciens UCMB-5033)

5e-114

21) pdhD
( YP_008420833.1 )

dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes

NC_022081
(Bacillus amyloliquefaciens UCMB5113)

5e-114

22) pdhD
( YP_006328293.1 )

dihydrolipoamide dehydrogenase

NC_017912
(Bacillus amyloliquefaciens Y2)

5e-114

23) pdhD
( YP_005420719.1 )

dihydrolipoamide dehydrogenase

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

5e-114

24) pdhD
( YP_007497094.1 )

dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes

NC_020410
(Bacillus amyloliquefaciens UCMB5036)

1e-113

25) M493_05385
( REF_PRJNA208285:M493 )

dihydrolipoamide dehydrogenase

NC_022080
(Geobacillus sp. JF8)

9e-114

26) GTNG_0925
( YP_001125048.1 )

dihydrolipoamide dehydrogenase

NC_009328
(Geobacillus thermodenitrificans NG80-2)

2e-113

27) GWCH70_0955
( YP_002949084.1 )

dihydrolipoamide dehydrogenase

NC_012793
(Geobacillus sp. WCH70)

1e-112

28) GY4MC1_2838
( YP_003990144.1 )

dihydrolipoamide dehydrogenase

NC_014650
(Geobacillus sp. Y4.1MC1)

1e-112

29) Geoth_2860
( YP_004588828.1 )

dihydrolipoamide dehydrogenase

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

1e-112

30) pdhD
( YP_001486601.1 )

dihydrolipoamide dehydrogenase

NC_009848
(Bacillus pumilus SAFR-032)

1e-112

31) pdhD
( YP_005960239.1 )

pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase

NC_017542
(Paenibacillus polymyxa M1)

4e-112

32) PPSC2_c2886
( YP_003947092.1 )

dihydrolipoyl dehydrogenase

NC_014622
(Paenibacillus polymyxa SC2)

4e-112

33) lpdA2
( YP_003870897.1 )

dihydrolipoyl dehydrogenase (E3 component of pyruvate complex)

NC_014483
(Paenibacillus polymyxa E681)

6e-112

34) pdhD
( YP_002316237.1 )

dihydrolipoamide dehydrogenase

NC_011567
(Anoxybacillus flavithermus WK1)

6e-112

35) pdhD
( YP_002560116.1 )

dihydrolipoamide dehydrogenase

NC_011999
(Macrococcus caseolyticus JCSC5402)

7e-112

36) pdhD
( YP_175913.1 )

dihydrolipoamide dehydrogenase

NC_006582
(Bacillus clausii KSM-K16)

1e-111

37) pdhD
( YP_003425173.1 )

dihydrolipoamide dehydrogenase

NC_013791
(Bacillus pseudofirmus OF4)

4e-111

38) pdhD
( NP_243518.1 )

dihydrolipoamide dehydrogenase

NC_002570
(Bacillus halodurans C-125)

5e-111

39) pdhD
( YP_006015789.1 )

pyruvate dehydrogenase complex E3 component, lipoamide dehydrogenase

NC_017568
(Staphylococcus pseudintermedius ED99)

1e-110

40) SPSINT_0805
( YP_004148969.1 )

dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_014925
(Staphylococcus pseudintermedius HKU10-03)

1e-110

41) pdhD
( NP_692336.1 )

dihydrolipoamide dehydrogenase

NC_004193
(Oceanobacillus iheyensis HTE831)

2e-110

42) BATR1942_05075
( YP_003972900.1 )

dihydrolipoamide dehydrogenase

NC_014639
(Bacillus atrophaeus 1942)

2e-110

43) pdhD
( YP_003596540.1 )

pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase

NC_014103
(Bacillus megaterium DSM 319)

3e-110

44) pdhD
( YP_005496071.1 )

dihydrolipoyl dehydrogenase

NC_017138
(Bacillus megaterium WSH-002)

3e-110

45) Bsel_1605
( YP_003699681.1 )

dihydrolipoamide dehydrogenase

NC_014219
(Bacillus selenitireducens MLS10)

4e-110

46) pdhD
( YP_003561816.1 )

pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase

NC_014019
(Bacillus megaterium QM B1551)

5e-110

47) A7A1_0566
( YP_007209838.1 )

dihydrolipoyl dehydrogenase

NC_019896
(Bacillus subtilis BSP1)

7e-110

48) pdhD
( YP_003920132.1 )

dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes

NC_014551
(Bacillus amyloliquefaciens DSM 7)

1e-109

49) pdhD
( YP_005545336.1 )

dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes

NC_017190
(Bacillus amyloliquefaciens LL3)

1e-109

50) pdhD
( YP_005541628.1 )

dihydrolipoamide dehydrogenase

NC_017188
(Bacillus amyloliquefaciens TA208)

1e-109

51) pdhD
( YP_005549987.1 )

dihydrolipoamide dehydrogenase

NC_017191
(Bacillus amyloliquefaciens XH7)

1e-109

52) pdhD
( NP_389344.1 )

dihydrolipoyl dehydrogenase

NC_000964
(Bacillus subtilis 168)

8e-110

53) pdhD
( YP_007533414.1 )

dihydrolipoyl dehydrogenase PdhD

NC_020507
(Bacillus subtilis 6051-HGW)

8e-110

54) pdhD
( YP_005560784.1 )

dihydrolipoamide dehydrogenase

NC_017196
(Bacillus subtilis BEST195)

8e-110

55) BSn5_19380
( YP_004207507.1 )

dihydrolipoamide dehydrogenase

NC_014976
(Bacillus subtilis BSn5)

8e-110

56) pdhD
( YP_006629648.1 )

dihydrolipoamide dehydrogenase E3 subunit of both pyruvate complexes

NC_018520
(Bacillus subtilis QB928)

8e-110

57) I33_1641
( YP_005556582.1 )

dihydrolipoamide dehydrogenase

NC_017195
(Bacillus subtilis RO-NN-1)

8e-110

58) pdhD
( YP_007426648.1 )

dihydrolipoamide dehydrogenase

NC_020244
(Bacillus subtilis XF-1)

8e-110

59) I653_07505
( YP_007662265.1 )

dihydrolipoamide dehydrogenase

NC_020832
(subtilis subtilis BAB-1)

8e-110

60) GYO_1800
( YP_004877072.1 )

dihydrolipoamide dehydrogenase

NC_016047
(Bacillus subtilis TU-B-10)

2e-109

61) pdhD
( YP_003865860.1 )

dihydrolipoamide dehydrogenase

NC_014479
(Bacillus subtilis W23)

2e-109

62) pdhD
( YP_008077817.1 )

dihydrolipoamide dehydrogenase E3 component PdhD

NC_021362
(Bacillus licheniformis 9945A)

3e-109

63) pdhD
( YP_006713057.1 )

dihydrolipoamide dehydrogenase

NC_006322
(Bacillus licheniformis DSM 13)

3e-109

64) pdhD
( YP_078853.1 )

dihydrolipoamide dehydrogenase

NC_006270
(Bacillus licheniformis DSM 13)

3e-109

65) SAOUHSC_01043
( YP_499592.1 )

dihydrolipoamide dehydrogenase

NC_007795
(Staphylococcus aureus NCTC 8325)

3e-109

66) SAVC_04640
( YP_005290525.1 )

dihydrolipoamide dehydrogenase PdhD

NC_016912
(Staphylococcus aureus VC40)

3e-109

67) SSP1693
( YP_301783.1 )

dihydrolipoamide dehydrogenase

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

3e-109

68) HPL003_20290
( YP_005077019.1 )

dihydrolipoyl dehydrogenase (E3 component of pyruvate complex)

NC_016641
(Paenibacillus terrae HPL-003)

4e-109

69) pdhD
( YP_005741802.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_017340
(Staphylococcus aureus 04-02981)

6e-109

70) pdhD
( YP_006709863.1 )

dihydrolipoamide dehydrogenase

NC_018608
(Staphylococcus aureus 08BA02176)

6e-109

71) MS7_1053
( YP_005757495.1 )

dihydrolipoyl dehydrogenase

NC_017351
(Staphylococcus aureus 11819-97)

6e-109

72) SAAG_02205
( YP_008448953.1 )

dihydrolipoyl dehydrogenase

NC_022113
(Staphylococcus aureus 55/2053)

6e-109

73) pdhD
( YP_008485006.1 )

pyruvate dehydrogenase E3, dihydrolipoamide dehydrogenase component PdhD

NC_022222
(Staphylococcus aureus 6850)

6e-109

74) ST398NM01_1093
( YP_006195159.1 )

dihydrolipoamide dehydrogenase

NC_017673
(Staphylococcus aureus 71193)

6e-109

75) pdhD
( YP_008168169.1 )

Dihydrolipoyl dehydrogenase

NC_021670
(Staphylococcus aureus Bmb9393)

6e-109

76) lpdA
( YP_008127870.1 )

dihydrolipoyl dehydrogenase

NC_021554
(Staphylococcus aureus CA-347)

6e-109

77) SAKOR_01018
( YP_008491206.1 )

Dihydrolipoamide dehydrogenase

NC_022226
(Staphylococcus aureus CN1)

6e-109

78) pdhD
( YP_185969.1 )

dihydrolipoamide dehydrogenase

NC_002951
(Staphylococcus aureus COL)

6e-109

79) lpdA
( YP_005749682.1 )

dihydrolipoyl dehydrogenase

NC_017343
(Staphylococcus aureus ECT-R 2)

6e-109

80) SAOV_1040
( YP_005736535.1 )

dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3

NC_017337
(Staphylococcus aureus ED133)

6e-109

81) pdhD
( YP_006237286.1 )

dihydrolipoamide dehydrogenase

NC_017763
(Staphylococcus aureus HO 5096 0412)

6e-109

82) SaurJH1_1178
( YP_001316319.1 )

dihydrolipoamide dehydrogenase

NC_009632
(Staphylococcus aureus JH1)

6e-109

83) SaurJH9_1156
( YP_001246532.1 )

dihydrolipoamide dehydrogenase

NC_009487
(Staphylococcus aureus JH9)

6e-109

84) pdhD
( YP_005744411.1 )

dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3

NC_017341
(Staphylococcus aureus JKD6008)

6e-109

85) pdhD
( YP_005739109.1 )

dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3

NC_017338
(Staphylococcus aureus JKD6159)

6e-109

86) pdhD
( YP_005755007.1 )

dihydrolipoamide dehydrogenase

NC_017349
(Staphylococcus aureus LGA251)

6e-109

87) M013TW_1028
( YP_005297465.1 )

dihydrolipoamide dehydrogenase of pyruvatedehydrogenase complex

NC_016928
(Staphylococcus aureus M013)

6e-109

88) BN843_10010
( YP_007868067.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_021059
(Staphylococcus aureus M1)

6e-109

89) pdhD
( YP_040483.1 )

dihydrolipoamide dehydrogenase

NC_002952
(Staphylococcus aureus MRSA252)

6e-109

90) SAMSHR1132_09430
( YP_005325465.1 )

dihydrolipoamide dehydrogenase

NC_016941
(Staphylococcus aureus MSHR1132)

6e-109

91) SAS1031
( YP_043155.1 )

dihydrolipoamide dehydrogenase

NC_002953
(Staphylococcus aureus MSSA476)

6e-109

92) pdhD
( YP_001441678.1 )

dihydrolipoamide dehydrogenase

NC_009782
(Staphylococcus aureus Mu3)

6e-109

93) pdhD
( NP_371620.1 )

dihydrolipoamide dehydrogenase

NC_002758
(Staphylococcus aureus Mu50)

6e-109

94) pdhD
( NP_645796.1 )

dihydrolipoamide dehydrogenase

NC_003923
(Staphylococcus aureus MW2)

6e-109

95) pdhD
( NP_374214.1 )

dihydrolipoamide dehydrogenase

NC_002745
(Staphylococcus aureus N315)

6e-109

96) pdhD
( YP_001331996.1 )

dihydrolipoamide dehydrogenase

NC_009641
(Staphylococcus aureus Newman)

6e-109

97) pdhD
( YP_416447.1 )

dihydrolipoamide dehydrogenase

NC_007622
(Staphylococcus aureus RF122)

6e-109

98) pdhD
( YP_008587611.1 )

dihydrolipoamide dehydrogenase

NC_022443
(Staphylococcus aureus SA40)

6e-109

99) pdhD
( YP_008585078.1 )

dihydrolipoamide dehydrogenase

NC_022442
(Staphylococcus aureus SA957)

6e-109

100) pdhD
( YP_007583369.1 )

Dihydrolipoyl dehydrogenase

NC_020536
(Staphylococcus aureus ST228)

6e-109

101) pdhD
( YP_007621083.1 )

Dihydrolipoyl dehydrogenase

NC_020566
(Staphylococcus aureus ST228)

6e-109

102) pdhD
( YP_007623072.1 )

Dihydrolipoyl dehydrogenase

NC_020568
(Staphylococcus aureus ST228)

6e-109

103) pdhD
( YP_007577382.1 )

Dihydrolipoyl dehydrogenase

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

6e-109

104) pdhD
( YP_007619099.1 )

Dihydrolipoyl dehydrogenase

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

6e-109

105) pdhD
( YP_007579391.1 )

Dihydrolipoyl dehydrogenase

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

6e-109

106) pdhD
( YP_007581354.1 )

Dihydrolipoyl dehydrogenase

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

6e-109

107) pdhD
( YP_007585335.1 )

Dihydrolipoyl dehydrogenase

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

6e-109

108) lpdA
( YP_005733890.1 )

dihydrolipoyl dehydrogenase

NC_017333
(Staphylococcus aureus ST398)

6e-109

109) SAT0131_01134
( YP_005752343.1 )

Dihydrolipoyl dehydrogenase

NC_017347
(Staphylococcus aureus T0131)

6e-109

110) lpd2
( YP_005748218.1 )

dihydrolipoyl dehydrogenase

NC_017342
(Staphylococcus aureus TCH60)

6e-109

111) pdhD
( YP_005731101.1 )

dihydrolipoamide dehydrogenase

NC_017331
(Staphylococcus aureus TW20)

6e-109

112) lpdA
( YP_493694.1 )

dihydrolipoamide dehydrogenase

NC_007793
(Staphylococcus aureus FPR3757)

1e-108

113) pdhD
( YP_001574938.1 )

dihydrolipoamide dehydrogenase

NC_010079
(Staphylococcus aureus TCH1516)

1e-108

114) lpd
( YP_005517064.1 )

dihydrolipoamide dehydrogenase

NC_017167
(Alicyclobacillus acidocaldarius Tc-4-1)

2e-108

115) Aaci_0454
( YP_003183902.1 )

dihydrolipoamide dehydrogenase

NC_013205
(Alicyclobacillus acidocaldarius DSM 446)

3e-108

116) SLGD_01779
( YP_003471996.1 )

dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_013893
(Staphylococcus lugdunensis HKU09-01)

3e-108

117) pdhD
( YP_005760884.1 )

dihydrolipoamide dehydrogenase

NC_017353
(Staphylococcus lugdunensis N920143)

3e-108

118) SE0794
( NP_764349.1 )

dihydrolipoamide dehydrogenase

NC_004461
(Staphylococcus epidermidis ATCC 12228)

6e-108

119) pdhD
( YP_188267.1 )

dihydrolipoamide dehydrogenase

NC_002976
(Staphylococcus epidermidis RP62A)

6e-108

120) pdhD
( YP_003281976.1 )

dihydrolipoamide dehydrogenase

NC_013450
(Staphylococcus aureus ED98)

7e-108

121) pdhD
( YP_253771.1 )

dihydrolipoamide dehydrogenase

NC_007168
(Staphylococcus haemolyticus JCSC1435)

2e-107

122) Btus_0313
( YP_003588230.1 )

dihydrolipoamide dehydrogenase

NC_014098
(Kyrpidia tusciae DSM 2912)

4e-107

123) pdhD
( YP_006845511.1 )

pyruvate dehydrogenase complex E3 component

NC_018704
(Amphibacillus xylanus NBRC 15112)

9e-107

124) pdhD
( YP_002633817.1 )

dihydrolipoamide dehydrogenase

NC_012121
(Staphylococcus carnosus TM300)

9e-107

125) Bsph_1366
( YP_001697104.1 )

dihydrolipoyl dehydrogenase

NC_010382
(Lysinibacillus sphaericus C3-41)

3e-106

126) pdhD
( YP_004568410.1 )

dihydrolipoamide dehydrogenase

NC_015634
(Bacillus coagulans 2-6)

3e-106

127) Bcoa_0220
( YP_004858226.1 )

dihydrolipoamide dehydrogenase

NC_016023
(Bacillus coagulans 36D1)

5e-106

128) GYMC10_2404
( YP_003242489.1 )

dihydrolipoamide dehydrogenase

NC_013406
(Paenibacillus sp. Y412MC10)

3e-105

129) BcerKBAB4_3796
( YP_001646593.1 )

dihydrolipoamide dehydrogenase

NC_010184
(Bacillus weihenstephanensis KBAB4)

2e-104

130) lpd
( YP_005863268.1 )

Dihydrolipoyl dehydrogenase

NC_017481
(Lactobacillus salivarius CECT 5713)

2e-104

131) lpd
( YP_535054.1 )

dihydrolipoamide dehydrogenase

NC_007929
(Lactobacillus salivarius UCC118)

2e-104

132) MY9_1600
( YP_006231393.1 )

dihydrolipoamide dehydrogenase

NC_017743
(Bacillus sp. JS)

6e-104

133) pdhD
( YP_002340023.1 )

dihydrolipoamide dehydrogenase

NC_011658
(Bacillus cereus AH187)

7e-104

134) pdhD
( NP_980312.1 )

pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase

NC_003909
(Bacillus cereus ATCC 10987)

7e-104

135) pdhD
( YP_085309.1 )

dihydrolipoamide dehydrogenase

NC_006274
(Bacillus cereus E33L)

7e-104

136) BCK_15385
( YP_006597177.1 )

dihydrolipoamide dehydrogenase

NC_018491
(Bacillus cereus FRI-35)

7e-104

137) BCN_3870
( YP_005106403.1 )

pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase

NC_016771
(Bacillus cereus NC7401)

7e-104

138) pdhD
( YP_002531475.1 )

dihydrolipoamide dehydrogenase

NC_011969
(Bacillus cereus Q1)

7e-104

139) pdhD
( YP_896332.1 )

dihydrolipoamide dehydrogenase

NC_008600
(Bacillus thuringiensis Al Hakam)

7e-104

140) YBT020_19510
( YP_005567548.1 )

dihydrolipoamide dehydrogenase

NC_017200
(Bacillus thuringiensis YBT-020)

7e-104

141) pdhD
( YP_002751329.1 )

dihydrolipoamide dehydrogenase

NC_012472
(Bacillus cereus 03BB102)

1e-103

142) BC3970
( NP_833689.1 )

dihydrolipoamide dehydrogenase

NC_004722
(Bacillus cereus ATCC 14579 )

1e-103

143) pdhD
( YP_002368770.1 )

dihydrolipoamide dehydrogenase

NC_011725
(Bacillus cereus B4264)

1e-103

144) bcf_19720
( YP_005120578.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_016779
(Bacillus cereus F837/76)

1e-103

145) pdhD
( YP_002447536.1 )

dihydrolipoamide dehydrogenase

NC_011772
(Bacillus cereus G9842)

1e-103

146) HD73_4253
( YP_007423352.1 )

dihydrolipoamide dehydrogenase

NC_020238
(Bacillus cereus HD73)

1e-103

147) pdhD
( YP_038031.1 )

dihydrolipoamide dehydrogenase

NC_005957
(Bacillus thuringiensis 97-27)

1e-103

148) pdhD
( YP_003666163.1 )

dihydrolipoamide dehydrogenase

NC_014171
(Bacillus thuringiensis BMB171)

1e-103

149) pdhD
( YP_006928722.1 )

dihydrolipoyl dehydrogenase PdhD

NC_018877
(Bacillus thuringiensis Bt407)

1e-103

150) pdhD
( YP_005573929.1 )

dihydrolipoamide dehydrogenase

NC_017208
(Bacillus thuringiensis CT-43)

1e-103

151) BTF1_18150
( YP_006611719.1 )

dihydrolipoamide dehydrogenase

NC_018508
(Bacillus thuringiensis HD-789)

1e-103

152) H175_ch4037
( YP_007480497.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_020376
(Bacillus thuringiensis IS5056)

1e-103

153) MC28_3258
( YP_006830079.1 )

anti-sigma F factor antagonist

NC_018693
(Bacillus thuringiensis MC28)

1e-103

154) pdhD
( YP_002868269.1 )

dihydrolipoamide dehydrogenase

NC_012659
(Bacillus anthracis A0248)

1e-103

155) pdhD
( NP_846418.1 )

dihydrolipoamide dehydrogenase

NC_003997
(Bacillus anthracis Ames)

1e-103

156) pdhD
( YP_020826.1 )

dihydrolipoamide dehydrogenase

NC_007530
(Bacillus anthracis Ames Ancestor)

1e-103

157) pdhD
( YP_002816752.1 )

dihydrolipoamide dehydrogenase

NC_012581
(Bacillus anthracis CDC 684)

1e-103

158) H9401_3986
( YP_006211040.1 )

Pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase

NC_017729
(Bacillus anthracis H9401)

1e-103

159) BAS3880
( YP_030130.1 )

dihydrolipoamide dehydrogenase

NC_005945
(Bacillus anthracis Sterne)

1e-103

160) pdhD
( YP_002452934.1 )

dihydrolipoamide dehydrogenase

NC_011773
(Bacillus cereus AH820)

1e-103

161) lpdA
( YP_005872951.1 )

dihydrolipoyl dehydrogenase

NC_017491
(Lactobacillus rhamnosus ATCC 8530)

1e-103

162) pdhD
( YP_003174027.1 )

dihydrolipoamide dehydrogenase

NC_013199
(Lactobacillus rhamnosus Lc 705)

1e-103

163) LOCK900_1292
( YP_008202918.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_021723
(Lactobacillus rhamnosus LOCK900)

1e-103

164) LOCK908_1374
( YP_008205870.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_021725
(Lactobacillus rhamnosus LOCK908)

1e-103

165) pdhD
( YP_003171069.1 )

dihydrolipoamide dehydrogenase

NC_013198
(Lactobacillus rhamnosus GG)

2e-103

166) LRHM_1269
( YP_005865761.1 )

pyruvate dehydrogenase complex E3 component

NC_017482
(Lactobacillus rhamnosus GG)

2e-103

167) pdhD
( YP_003793671.1 )

dihydrolipoamide dehydrogenase

NC_014335
(Bacillus cereus CI)

3e-103

168) B1NLA3E_05740
( YP_007909413.1 )

dihydrolipoamide dehydrogenase

NC_021171
(Bacillus sp. 1NLA3E)

1e-102

169) BTG_29580
( YP_006607342.1 )

dihydrolipoamide dehydrogenase

NC_018500
(Bacillus thuringiensis HD-771)

6e-103

170) pdhD
( YP_395692.1 )

dihydrolipoamide dehydrogenase

NC_007576
(Lactobacillus sakei 23K)

6e-103

171) A284_08350
( YP_007385431.1 )

dihydrolipoamide dehydrogenase

NC_020164
(Staphylococcus warneri SG1)

9e-103

172) LSEI_1308
( YP_806531.1 )

dihydrolipoamide dehydrogenase

NC_008526
(Lactobacillus casei ATCC 334)

2e-102

173) LBPG_00518
( YP_008446540.1 )

dihydrolipoyl dehydrogenase

NC_022112
(Lactobacillus paracasei 8700:2)

2e-102

174) LCBD_1516
( YP_005859554.1 )

Dihydrolipoamide dehydrogenase

NC_017474
(Lactobacillus casei BD-II)

3e-102

175) pdhD
( YP_001987478.1 )

dihydrolipoamide dehydrogenase

NC_010999
(Lactobacillus casei BL23)

3e-102

176) LC2W_1481
( YP_005856398.1 )

Dihydrolipoamide dehydrogenase

NC_017473
(Lactobacillus casei LC2W)

3e-102

177) LOCK919_1492
( YP_008200006.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_021721
(Lactobacillus casei LOCK919)

3e-102

178) pdhD
( YP_006751577.1 )

dihydrolipoyl dehydrogenase

NC_018641
(Lactobacillus casei W56)

3e-102

179) LCAZH_1302
( YP_003788386.1 )

acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase

NC_014334
(Lactobacillus casei Zhang)

3e-102

180) Bcer98_2671
( YP_001375900.1 )

dihydrolipoamide dehydrogenase

NC_009674
(Bacillus cytotoxicus NVH 391-98)

7e-102

181) Tmar_1670
( YP_004102506.1 )

dihydrolipoamide dehydrogenase

NC_014831
(Thermaerobacter marianensis DSM 12885)

2e-101

182) A11Q_696
( YP_007644523.1 )

dihydrolipoamide dehydrogenase, E3 subunit

NC_020813
(Bdellovibrio exovorus JSS)

4e-101

183) Sulac_1677
( YP_005256845.1 )

dihydrolipoamide dehydrogenase

NC_016884
(Sulfobacillus acidophilus DSM 10332)

1e-100

184) lpd
( YP_004721131.1 )

dihydrolipoyl dehydrogenase

NC_015757
(Sulfobacillus acidophilus TPY)

1e-100

185) lpdA1
( YP_003869985.1 )

dihydrolipoyl dehydrogenase (E3 component of pyruvate complex)

NC_014483
(Paenibacillus polymyxa E681)

1e-99

186) pdhD.1
( YP_004560539.1 )

pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase

NC_015601
(Erysipelothrix rhusiopathiae Fujisawa)

8e-100

187) K210_00155
( YP_008072622.1 )

dihydrolipoamide dehydrogenase

NC_021354
(Erysipelothrix rhusiopathiae SY1027)

8e-100

188) Pjdr2_2653
( YP_003011393.1 )

dihydrolipoamide dehydrogenase

NC_012914
(Paenibacillus sp. JDR-2)

1e-99

189) pdhD1
( YP_004374630.1 )

dihydrolipoyl dehydrogenase

NC_015391
(Carnobacterium sp. 17-4)

3e-99

190) LC40_0740
( YP_005848843.1 )

dihydrolipoyl dehydrogenase

NC_017465
(Lactobacillus fermentum CECT 5716)

6e-99

191) LAF_1137
( YP_001843953.1 )

dihydrolipoamide dehydrogenase

NC_010610
(Lactobacillus fermentum IFO 3956)

6e-99

192) HPL003_16435
( YP_005076256.1 )

dihydrolipoyl dehydrogenase (E3 component of pyruvate complex)

NC_016641
(Paenibacillus terrae HPL-003)

1e-98

193) LBFF_1254
( YP_007995430.1 )

Dihydrolipoyl dehydrogenase

NC_021235
(Lactobacillus fermentum F-6)

1e-98

194) lpdA
( YP_006992127.2 )

dihydrolipoyl dehydrogenase

NC_019425
(Carnobacterium maltaromaticum LMA28)

4e-98

195) Pjdr2_1144
( YP_003009909.1 )

dihydrolipoamide dehydrogenase

NC_012914
(Paenibacillus sp. JDR-2)

2e-97

196) A2cp1_2108
( YP_002492515.1 )

dihydrolipoamide dehydrogenase

NC_011891
(Anaeromyxobacter dehalogenans 2CP-1)

2e-97

197) Adeh_1822
( YP_465031.1 )

dihydrolipoamide dehydrogenase

NC_007760
(Anaeromyxobacter dehalogenans 2CP-C)

1e-96

198) BBR47_30010
( YP_002772482.1 )

dihydrolipoyl dehydrogenase

NC_012491
(Brevibacillus brevis NBRC 100599)

8e-97

199) pdhD
( YP_003464188.1 )

dihydrolipoamide dehydrogenase E3 subunit

NC_013891
(Listeria seeligeri SLCC3954)

1e-96

200) AnaeK_2038
( YP_002134395.1 )

dihydrolipoamide dehydrogenase

NC_011145
(Anaeromyxobacter sp. K)

1e-96

201) lin1047
( NP_470384.1 )

dihydrolipoamide dehydrogenase

NC_003212
(Listeria innocua Clip11262)

2e-96

202) MUO_05550
( YP_006205306.1 )

dihydrolipoamide dehydrogenase

NC_017728
(Listeria monocytogenes 07PF0776)

2e-96

203) pdhD
( YP_006672878.1 )

dihydrolipoamide dehydrogenase

NC_018584
(Listeria monocytogenes ATCC 19117)

2e-96

204) PdhD
( YP_002757780.1 )

dihydrolipoamide dehydrogenase

NC_012488
(Listeria monocytogenes Clip81459)

2e-96

205) LMOf2365_1076
( YP_013676.1 )

dihydrolipoamide dehydrogenase

NC_002973
(Listeria monocytogenes F2365)

2e-96

206) lpdA
( YP_002350530.1 )

dihydrolipoamide dehydrogenase

NC_011660
(Listeria monocytogenes HCC23)

2e-96

207) LM220_05987
( YP_008289259.1 )

dihydrolipoamide dehydrogenase

NC_021830
(Listeria monocytogenes J1-220)

2e-96

208) M640_04225
( YP_008301392.1 )

dihydrolipoamide dehydrogenase

NC_021839
(Listeria monocytogenes J1776)

2e-96

209) LM1816_12542
( YP_008285679.1 )

dihydrolipoamide dehydrogenase

NC_021829
(Listeria monocytogenes J1816)

2e-96

210) M644_10705
( YP_008284730.1 )

dihydrolipoamide dehydrogenase

NC_021827
(Listeria monocytogenes J1817)

2e-96

211) M645_04765
( YP_008304386.1 )

dihydrolipoamide dehydrogenase

NC_021840
(Listeria monocytogenes J1926)

2e-96

212) M637_07960
( YP_008275388.1 )

dihydrolipoamide dehydrogenase

NC_021824
(Listeria monocytogenes J2-064)

2e-96

213) M638_08045
( YP_008278250.1 )

dihydrolipoamide dehydrogenase

NC_021825
(Listeria monocytogenes J2-1091)

2e-96

214) pdhD
( YP_006754185.1 )

dihydrolipoamide dehydrogenase

NC_018642
(Listeria monocytogenes L312)

2e-96

215) pdhD
( YP_005926057.1 )

dihydrolipoamide dehydrogenase

NC_017529
(Listeria monocytogenes L99)

2e-96

216) BN418_1273
( YP_007603391.1 )

Dihydrolipoyl dehydrogenase

NC_020557
(Listeria monocytogenes La111)

2e-96

217) pdhD
( YP_005947148.1 )

dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex

NC_017537
(Listeria monocytogenes M7)

2e-96

218) M643_15605
( YP_008282618.1 )

dihydrolipoamide dehydrogenase

NC_021826
(Listeria monocytogenes N1-011A)

2e-96

219) BN419_1270
( YP_007606519.1 )

Dihydrolipoyl dehydrogenase

NC_020558
(Listeria monocytogenes N53-1)

2e-96

220) M641_08535
( YP_008299216.1 )

dihydrolipoamide dehydrogenase

NC_021838
(Listeria monocytogenes R2-502)

2e-96

221) pdhD
( YP_006690226.1 )

dihydrolipoamide dehydrogenase

NC_018590
(Listeria monocytogenes SLCC2376)

2e-96

222) pdhD
( YP_006675742.1 )

dihydrolipoamide dehydrogenase

NC_018585
(Listeria monocytogenes SLCC2378)

2e-96

223) pdhD
( YP_006693055.1 )

dihydrolipoamide dehydrogenase

NC_018591
(Listeria monocytogenes SLCC2482)

2e-96

224) pdhD
( YP_006678598.1 )

dihydrolipoamide dehydrogenase

NC_018586
(Listeria monocytogenes SLCC2540)

2e-96

225) pdhD
( YP_006681507.1 )

dihydrolipoamide dehydrogenase

NC_018587
(Listeria monocytogenes SLCC2755)

2e-96

226) lpd
( YP_004887017.1 )

dihydrolipoamide dehydrogenase

NC_016052
(Tetragenococcus halophilus NBRC 12172)

2e-96

227) pdhD
( NP_967737.1 )

dihydrolipoamide dehydrogenase, E3 subunit

NC_005363
(Bdellovibrio bacteriovorus HD100)

5e-96

228) pdhD
( YP_007021714.1 )

dihydrolipoamide dehydrogenase, E3 subunit

NC_019567
(Bdellovibrio bacteriovorus Tiberius)

1e-95

229) Anae109_1998
( YP_001379185.1 )

dihydrolipoamide dehydrogenase

NC_009675
(Anaeromyxobacter sp. Fw109-5)

6e-96

230) BTF1_10495
( YP_006610218.1 )

dihydrolipoamide dehydrogenase

NC_018508
(Bacillus thuringiensis HD-789)

7e-96

231) Eab7_1857
( YP_006791573.1 )

dihydrolipoyl dehydrogenase

NC_018665
(Exiguobacterium antarcticum Eab7)

3e-95

232) Exig_2008
( YP_001814477.1 )

dihydrolipoamide dehydrogenase

NC_010556
(Exiguobacterium sibiricum 255-15)

3e-95

233) Theco_1716
( YP_007212846.1 )

dihydrolipoamide dehydrogenase

NC_019897
(Thermobacillus composti KWC4)

1e-94

234) pdhD2
( YP_004375102.1 )

dihydrolipoyl dehydrogenase

NC_015391
(Carnobacterium sp. 17-4)

1e-94

235) Desti_1340
( YP_006446317.1 )

dihydrolipoamide dehydrogenase

NC_018025
(Desulfomonile tiedjei DSM 6799)

1e-94

236) Htur_3594
( YP_003405129.1 )

dihydrolipoamide dehydrogenase

NC_013743
(Haloterrigena turkmenica DSM 5511)

1e-94

237) pdhD
( YP_006725435.1 )

dihydrolipoamide dehydrogenase

NC_018610
(Lactobacillus buchneri CD034)

1e-94

238) Lbuc_0739
( YP_004398066.1 )

dihydrolipoamide dehydrogenase

NC_015428
(Lactobacillus buchneri NRRL B-30929)

1e-94

239) EAT1b_2788
( YP_002887147.1 )

dihydrolipoamide dehydrogenase

NC_012673
(Exiguobacterium sp. AT1b)

1e-93

240) pdhD
( YP_003413252.1 )

dihydrolipoamide dehydrogenase

NC_013766
(Listeria monocytogenes 08-5578)

1e-93

241) pdhD
( YP_003416297.1 )

dihydrolipoamide dehydrogenase

NC_013768
(Listeria monocytogenes 08-5923)

1e-93

242) LMRG_00517
( YP_005962186.1 )

dihydrolipoyl dehydrogenase

NC_017544
(Listeria monocytogenes 10403S)

1e-93

243) M642_02945
( YP_008271454.1 )

dihydrolipoamide dehydrogenase

NC_021823
(Listeria monocytogenes C1-387)

1e-93

244) PdhD
( NP_464580.1 )

dihydrolipoamide dehydrogenase

NC_003210
(Listeria monocytogenes EGD-e)

1e-93

245) LMLG_2332
( YP_005970884.1 )

dihydrolipoyl dehydrogenase

NC_017547
(Listeria monocytogenes Finland 1988)

1e-93

246) LMKG_01867
( YP_005967974.1 )

dihydrolipoamide dehydrogenase

NC_017546
(Listeria monocytogenes FSL R2-561)

1e-93

247) LMOG_00665
( YP_005965049.1 )

dihydrolipoyl dehydrogenase

NC_017545
(Listeria monocytogenes J0161)

1e-93

248) M639_12365
( YP_008297033.1 )

dihydrolipoamide dehydrogenase

NC_021837
(Listeria monocytogenes J2-031)

1e-93

249) pdhD
( YP_006684396.1 )

dihydrolipoamide dehydrogenase

NC_018588
(Listeria monocytogenes SLCC2372)

1e-93

250) pdhD
( YP_006687331.1 )

dihydrolipoamide dehydrogenase

NC_018589
(Listeria monocytogenes SLCC2479)

1e-93

251) pdhD
( YP_006695888.1 )

dihydrolipoamide dehydrogenase

NC_018592
(Listeria monocytogenes SLCC5850)

1e-93

252) pdhD
( YP_006698729.1 )

dihydrolipoamide dehydrogenase

NC_018593
(Listeria monocytogenes SLCC7179)

1e-93

253) pdhD
( YP_849230.1 )

dihydrolipoamide dehydrogenase

NC_008555
(Listeria welshimeri SLCC5334)

1e-93

254) PdhD
( YP_004854784.1 )

putative dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex

NC_016011
(Listeria ivanovii PAM 55)

9e-94

255) STH414
( YP_074243.1 )

pyruvate dehydrogenase E3

NC_006177
(Symbiobacterium thermophilum IAM 14863)

2e-93

256) SSIL_3151
( YP_006463720.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component

NC_018065
(Solibacillus silvestris StLB046)

1e-92

257) Natoc_3843
( YP_007311334.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component

NC_019974
(Natronococcus occultus SP4)

2e-91

258) OEOE_0331
( YP_809971.1 )

dihydrolipoamide dehydrogenase

NC_008528
(Oenococcus oeni PSU-1)

8e-92

259) ECBG_02161
( YP_007753075.1 )

dihydrolipoyl dehydrogenase

NC_020995
(Enterococcus casseliflavus EC20)

9e-92

260) pdhD.2
( YP_004561501.1 )

pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase

NC_015601
(Erysipelothrix rhusiopathiae Fujisawa)

3e-91

261) K210_05425
( YP_008073634.1 )

dihydrolipoamide dehydrogenase

NC_021354
(Erysipelothrix rhusiopathiae SY1027)

3e-91

262) MPD5_0995
( YP_005319720.1 )

dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_016938
(Melissococcus plutonius DAT561)

4e-91

263) MPTP_0948
( YP_004456216.1 )

dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_015516
(Melissococcus plutonius ATCC 35311)

6e-91

264) Lp16_1680
( YP_008121504.1 )

pyruvate dehydrogenase complex, E3 component

NC_021514
(Lactobacillus plantarum 16)

1e-90

265) pdhD
( YP_003063386.1 )

dihydrolipoamide dehydrogenase

NC_012984
(Lactobacillus plantarum JDM1)

1e-90

266) pdhD
( YP_007987401.1 )

Dihydrolipoyl dehydrogenase

NC_021224
(Lactobacillus plantarum P-8)

1e-90

267) pdhD
( YP_003925085.1 )

dihydrolipoamide dehydrogenase

NC_014554
(Lactobacillus plantarum ST-III)

1e-90

268) pdhD
( YP_004889893.1 )

pyruvate dehydrogenase complex, E3 component; dihydrolipoamide dehydrogenase

NC_004567
(Lactobacillus plantarum WCFS1)

1e-90

269) pdhD
( YP_007414834.1 )

Dihydrolipoyl dehydrogenase

NC_020229
(Lactobacillus plantarum ZJ316)

1e-90

270) pdhD
( YP_005354294.1 )

Dihydrolipoyl dehydrogenase

NC_017022
(Enterococcus faecium Aus0004)

1e-90

271) pdhD
( YP_008394777.1 )

Dihydrolipoyl dehydrogenase

NC_021994
(Enterococcus faecium AUS0085)

1e-90

272) lpdA
( YP_006375834.1 )

dihydrolipoyl dehydrogenase

NC_017960
(Enterococcus faecium DO)

1e-90

273) M7W_1726
( YP_007394403.1 )

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_020207
(Enterococcus faecium NRRL B-2354)

1e-90

274) Hoch_3234
( YP_003267629.1 )

dihydrolipoamide dehydrogenase

NC_013440
(Haliangium ochraceum DSM 14365)

3e-90

275) Natoc_4336
( YP_007311814.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component

NC_019976
(Natronococcus occultus SP4)

4e-90

276) HacjB3_00135
( YP_003735212.1 )

dihydrolipoamide dehydrogenase

NC_014297
(Halalkalicoccus jeotgali B3)

2e-89

277) BcerKBAB4_2393
( YP_001645234.1 )

dihydrolipoamide dehydrogenase

NC_010184
(Bacillus weihenstephanensis KBAB4)

2e-89

278) Rleg2_4388
( YP_002278386.1 )

dihydrolipoamide dehydrogenase

NC_011368
(Rhizobium leguminosarum WSM2304)

4e-89

279) SCE1572_45975
( YP_008155543.1 )

dihydrolipoamide dehydrogenase

NC_021658
(Sorangium cellulosum So0157-2)

5e-89

280) lpdA
( YP_004321751.1 )

dihydrolipoyl dehydrogenase

NC_015278
(Aerococcus urinae ACS-120-V-Col10a)

1e-88

281) Natgr_1350
( YP_007177010.1 )

dihydrolipoamide dehydrogenase

NC_019792
(Natronobacterium gregoryi SP2)

1e-88

282) ECBG_02482
( YP_007753907.1 )

dihydrolipoyl dehydrogenase

NC_020995
(Enterococcus casseliflavus EC20)

2e-88

283) lpdA
( YP_003536966.1 )

dihydrolipoyl dehydrogenase

NC_013967
(Haloferax volcanii DS2)

2e-88

284) lpdA
( NP_815077.1 )

dihydrolipoamide dehydrogenase

NC_004668
(Enterococcus faecalis V583)

4e-88

285) Natpe_0223
( YP_007279067.1 )

dihydrolipoamide dehydrogenase

NC_019962
(Natrinema pellirubrum DSM 15624)

5e-88

286) PEPE_1770
( YP_805233.1 )

dihydrolipoamide dehydrogenase

NC_008525
(Pediococcus pentosaceus ATCC 25745)

5e-88

287) EHR_12850
( YP_006488326.1 )

dihydrolipoamide dehydrogenase

NC_018081
(Enterococcus hirae ATCC 9790)

1e-87

288) Rleg_6500
( YP_002979489.1 )

dihydrolipoamide dehydrogenase

NC_012854
(Rhizobium leguminosarum WSM1325)

1e-87

289) lpdV
( YP_770584.1 )

dihydrolipoamide dehydrogenase

NC_008381
(Rhizobium leguminosarum 3841)

7e-88

290) NJ7G_0008
( YP_006539340.1 )

dihydrolipoamide dehydrogenase

NC_018224
(Natrinema sp. J7-2)

8e-88

291) BH0216
( NP_241082.1 )

pyruvate dehydrogenase E3

NC_002570
(Bacillus halodurans C-125)

2e-87

292) EFD32_1168
( YP_006537533.1 )

dihydrolipoyl dehydrogenase

NC_018221
(Enterococcus faecalis D32)

2e-87

293) lpd
( YP_005708201.1 )

dihydrolipoyl dehydrogenase

NC_017316
(Enterococcus faecalis OG1RF)

2e-87

294) pdhD
( YP_007152967.1 )

dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

NC_019770
(Enterococcus faecalis Symbioflor 1)

2e-87

295) ENT_07990
( YP_007807376.1 )

dihydrolipoamide dehydrogenase

NC_021023
(Enterococcus sp. 7L76)

2e-87

296) LKI_02935
( YP_003621099.1 )

dihydrolipoamide dehydrogenase

NC_014136
(Leuconostoc kimchii IMSNU 11154)

2e-86

297) LGMK_00040
( YP_004704695.1 )

dihydrolipoamide dehydrogenase

NC_015734
(Leuconostoc sp. C2)

2e-86

298) JCM7686_3331
( YP_008406198.1 )

dihydrolipoamide dehydrogenase

NC_022041
(Paracoccus aminophilus JCM 7686)

5e-86

299) C270_05890
( YP_006796086.1 )

dihydrolipoamide dehydrogenase

NC_018673
(Leuconostoc carnosum JB16)

9e-86

300) Huta_1805
( YP_003130709.1 )

dihydrolipoamide dehydrogenase

NC_013158
(Halorhabdus utahensis DSM 12940)

2e-85

301) Lreu_0634
( YP_001271236.1 )

dihydrolipoamide dehydrogenase

NC_009513
(Lactobacillus reuteri DSM 20016)

2e-85

302) LAR_0611
( YP_001841607.1 )

dihydrolipoamide dehydrogenase

NC_010609
(Lactobacillus reuteri JCM 1112)

2e-85

303) pdhD
( YP_004650376.1 )

dihydrolipoyl dehydrogenase

NC_015697
(Lactobacillus reuteri SD2112)

2e-85

304) lpdA2
( YP_003978667.1 )

dihydrolipoyl dehydrogenase

NC_014640
(Achromobacter xylosoxidans A8)

2e-85

305) BBR47_27590
( YP_002772240.1 )

2-oxoacid dehydrogenase E3 component

NC_012491
(Brevibacillus brevis NBRC 100599)

2e-85

306) pdhD
( YP_001618650.1 )

pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase)

NC_010162
(Sorangium cellulosum So ce 56)

3e-85

307) N134_03485
( YP_008326006.1 )

dihydrolipoamide dehydrogenase

NC_021872
(Lactobacillus reuteri TD1)

3e-85

308) LRI_1272
( YP_008099626.1 )

pyruvate dehydrogenase complex E3 component

NC_021494
(Lactobacillus reuteri I5007)

6e-85

309) WKK_06350
( YP_004726819.1 )

dihydrolipoamide dehydrogenase

NC_015759
(Weissella koreensis KACC 15510)

2e-84

310) lpdA3
( NP_387041.1 )

dihydrolipoamide dehydrogenase

NC_003047
(Sinorhizobium meliloti 1021)

3e-84

311) lpdA3
( YP_007576209.1 )

putative dihydrolipoamide dehydrogenase (E3 component of branched-chain alpha-keto acid dehydrogenase complex) protein

NC_020528
(Sinorhizobium meliloti 2011)

3e-84

312) SinmeB_2765
( YP_005714905.1 )

dihydrolipoamide dehydrogenase

NC_017322
(Sinorhizobium meliloti BL225C)

3e-84

313) C770_GR4Chr3065
( YP_007191562.1 )

dihydrolipoamide dehydrogenase

NC_019845
(Sinorhizobium meliloti GR4)

3e-84

314) lpdV
( YP_006841663.1 )

dihydrolipoyl dehydrogenase

NC_018700
(Sinorhizobium meliloti Rm41)

3e-84

315) lpdA3
( YP_005721612.1 )

dihydrolipoamide dehydrogenase

NC_017325
(Sinorhizobium meliloti SM11)

3e-84

316) SCD_n00853
( YP_008545726.1 )

dihydrolipoamide dehydrogenase

NC_022357
(Sulfuricella denitrificans skB26)

7e-84

317) lpdV
( YP_006400688.1 )

dihydrolipoyl dehydrogenase LpdV

NC_018000
(Sinorhizobium fredii USDA 257)

6e-84

318) lpdA2
( YP_002827488.1 )

dihydrolipoamide dehydrogenase

NC_012587
(Sinorhizobium fredii NGR234)

1e-83

319) Nit79A3_3071
( YP_004696209.1 )

dihydrolipoamide dehydrogenase

NC_015731
(Nitrosomonas sp. Is79A3)

3e-83

320) lpdA2
( YP_005190318.1 )

dihydrolipoamide dehydrogenase

NC_016812
(Sinorhizobium fredii HH103)

3e-83

321) Smed_2829
( YP_001328494.1 )

dihydrolipoamide dehydrogenase

NC_009636
(Sinorhizobium medicae WSM419)

6e-83

322) lpdV
( YP_008367125.1 )

dihydrolipoamide dehydrogenase

NC_021907
(Rhizobium etli Mim1)

8e-83

323) lpdV
( YP_006381846.1 )

dihydrolipoamide dehydrogenase

NC_017966
(Tistrella mobilis KA081020-065)

1e-82

324) C269_06880
( YP_006745699.1 )

dihydrolipoamide dehydrogenase

NC_018631
(Leuconostoc gelidum JB7)

2e-82

325) lpdAc
( YP_472007.1 )

dihydrolipoamide dehydrogenase

NC_007764
(Rhizobium etli CFN 42)

2e-82

326) lpdA
( NP_772974.1 )

dihydrolipoamide dehydrogenase

NC_004463
(Bradyrhizobium japonicum USDA 110)

2e-82

327) pdhD
( YP_003772845.1 )

pyruvate dehydrogenase complex dihydrolipoyl dehydrogenase

NC_014319
(Leuconostoc gasicomitatum LMG 18811)

3e-82

328) lpdA4
( YP_003980913.1 )

dihydrolipoyl dehydrogenase

NC_014640
(Achromobacter xylosoxidans A8)

4e-82

329) Mmar10_0709
( YP_755940.1 )

dihydrolipoamide dehydrogenase

NC_008347
(Maricaulis maris MCS10)

6e-82

330) DGo_CA0210
( YP_006259595.1 )

Dihydrolipoyl dehydrogenase

NC_017790
(Deinococcus gobiensis I-0)

7e-82

331) PSJM300_13480
( YP_006525116.1 )

dihydrolipoamide dehydrogenase

NC_018177
(Pseudomonas stutzeri DSM 10701)

1e-81

332) Pden_4760
( YP_918517.1 )

dihydrolipoamide dehydrogenase

NC_008688
(Paracoccus denitrificans PD1222)

8e-82

333) NH44784_041831
( YP_008031248.1 )

Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

9e-82

334) Gura_1264
( YP_001230041.1 )

dihydrolipoamide dehydrogenase

NC_009483
(Geobacter uraniireducens Rf4)

2e-81

335) Nmag_1665
( YP_003479803.1 )

dihydrolipoamide dehydrogenase

NC_013922
(Natrialba magadii ATCC 43099)

2e-81

336) Trad_2118
( YP_003705774.1 )

dihydrolipoamide dehydrogenase

NC_014221
(Truepera radiovictrix DSM 17093)

2e-81

337) Pfl01_1616
( YP_347348.1 )

dihydrolipoamide dehydrogenase

NC_007492
(Pseudomonas fluorescens Pf0-1)

2e-81

338) MI1_03390
( YP_005174104.1 )

dihydrolipoamide dehydrogenase

NC_016805
(Leuconostoc mesenteroides J18)

3e-81

339) Deima_0504
( YP_004169828.1 )

dihydrolipoamide dehydrogenase

NC_014958
(Deinococcus maricopensis DSM 21211)

3e-81

340) lpdA2
( YP_001348351.1 )

dihydrolipoamide dehydrogenase

NC_009656
(Pseudomonas aeruginosa PA7)

3e-81

341) Deide_22710
( YP_002787056.1 )

dihydrolipoyl dehydrogenase (E3 component of alpha-ketoacid dehydrogenase complexes)

NC_012526
(Deinococcus deserti VCD115)

4e-81

342) LEUM_0740
( YP_818223.1 )

dihydrolipoamide dehydrogenase

NC_008531
(Leuconostoc mesenteroides ATCC 8293)

5e-81

343) pdhD
( YP_006350606.1 )

dihydrolipoamide dehydrogenase

NC_017941
(Haloferax mediterranei CGMCC 1.2087)

5e-81

344) pdhD
( YP_005847953.1 )

pyruvate dehydrogenase E3 component

NC_017464
(Ignavibacterium album JCM 16511)

5e-81

345) Mesci_0884
( YP_004140099.1 )

dihydrolipoamide dehydrogenase

NC_014923
(Mesorhizobium ciceri WSM1271)

1e-80

346) Halru_0171
( YP_007282956.1 )

dihydrolipoamide dehydrogenase

NC_019964
(Halovivax ruber XH-70)

1e-80

347) Dgeo_2323
( YP_605784.1 )

dihydrolipoamide dehydrogenase

NC_008025
(Deinococcus geothermalis DSM 11300)

7e-81

348) lpdV
( NP_250940.1 )

dihydrolipoamide dehydrogenase

NC_002516
(Pseudomonas aeruginosa PAO1)

8e-81

349) phdD
( YP_004759365.1 )

dihydrolipoamide dehydrogenase

NC_015859
(Corynebacterium variabile DSM 44702)

1e-80

350) Mesop_0914
( YP_004609498.1 )

dihydrolipoamide dehydrogenase

NC_015675
(Mesorhizobium opportunistum WSM2075)

1e-80

351) lpdV
( YP_002440643.1 )

dihydrolipoamide dehydrogenase

NC_011770
(Pseudomonas aeruginosa LESB58)

1e-80

352) lpdV
( YP_790986.1 )

dihydrolipoamide dehydrogenase

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

1e-80

353) lpdG
( YP_001172393.1 )

dihydrolipoamide dehydrogenase

NC_009434
(Pseudomonas stutzeri A1501)

1e-80

354) lpdG
( YP_004714144.1 )

dihydrolipoamide dehydrogenase

NC_015740
(Pseudomonas stutzeri ATCC 17588)

1e-80

355) lpdG
( YP_005938540.1 )

dihydrolipoamide dehydrogenase

NC_017532
(Pseudomonas stutzeri DSM 4166)

1e-80

356) Halar_2852
( YP_004808857.1 )

dihydrolipoamide dehydrogenase

NC_015954
(halophilic archaeon DL31)

2e-80

357) G655_13795
( YP_007709602.1 )

dihydrolipoamide dehydrogenase

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-80

358) lpdV
( YP_005975375.1 )

dihydrolipoamide dehydrogenase

NC_017548
(Pseudomonas aeruginosa M18)

2e-80

359) lpdV
( YP_005981492.1 )

dihydrolipoamide dehydrogenase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

2e-80

360) Desru_1663
( YP_004545214.1 )

dihydrolipoamide dehydrogenase

NC_015589
(Desulfotomaculum ruminis DSM 2154)

2e-80

361) PputW619_3510
( YP_001750362.1 )

dihydrolipoamide dehydrogenase

NC_010501
(Pseudomonas putida W619)

2e-80

362) Acid345_2790
( YP_591865.1 )

dihydrolipoamide dehydrogenase

NC_008009
(Candidatus Koribacter versatilis Ellin345)

2e-80

363) PputGB1_3758
( YP_001669984.1 )

dihydrolipoamide dehydrogenase

NC_010322
(Pseudomonas putida GB-1)

2e-80

364) L483_23270
( YP_008096416.1 )

dihydrolipoamide dehydrogenase

NC_021491
(Pseudomonas putida H8234)

2e-80

365) lpd
( YP_008112608.1 )

dihydrolipoyl dehydrogenase

NC_021505
(Pseudomonas putida NBRC 14164)

2e-80

366) lpdA1
( YP_004201424.1 )

dihydrolipoyl dehydrogenase

NC_014974
(Thermus scotoductus SA-01)

3e-80

367) mll4470
( NP_105334.1 )

dihydrolipoamide dehydrogenase

NC_002678
(Mesorhizobium loti MAFF303099)

3e-80

368) LVIS_1407
( YP_795536.1 )

dihydrolipoamide dehydrogenase

NC_008497
(Lactobacillus brevis ATCC 367)

3e-80

369) LVISKB_1352
( YP_007654192.1 )

Dihydrolipoyl dehydrogenase

NC_020819
(Lactobacillus brevis KB290)

3e-80

370) PADK2_14025
( YP_006482788.1 )

dihydrolipoamide dehydrogenase

NC_018080
(Pseudomonas aeruginosa DK2)

3e-80

371) M062_11770
( YP_008132787.1 )

dihydrolipoamide dehydrogenase

NC_021577
(Pseudomonas aeruginosa RP73)

3e-80

372) A458_11460
( YP_006457950.1 )

dihydrolipoamide dehydrogenase

NC_018028
(Pseudomonas stutzeri CCUG 29243)

3e-80

373) Mesau_00865
( YP_007302725.1 )

dihydrolipoamide dehydrogenase

NC_019973
(Mesorhizobium australicum WSM2073)

4e-80

374) Psest_2492
( YP_007240644.1 )

dihydrolipoamide dehydrogenase

NC_019936
(Pseudomonas stutzeri RCH2)

4e-80

375) Pput_1667
( YP_001267007.1 )

dihydrolipoamide dehydrogenase

NC_009512
(Pseudomonas putida F1)

5e-80

376) YSA_08443
( YP_006388453.1 )

Dihydrolipoamide dehydrogenase

NC_017986
(Pseudomonas putida ND6)

5e-80

377) Deima_2793
( YP_004172087.1 )

dihydrolipoamide dehydrogenase

NC_014958
(Deinococcus maricopensis DSM 21211)

6e-80

378) lpd
( YP_609157.1 )

dihydrolipoamide dehydrogenase

NC_008027
(Pseudomonas entomophila L48)

6e-80

379) lpdG
( YP_005929538.1 )

LpdG

NC_017530
(Pseudomonas putida BIRD-1)

6e-80

380) lpdG
( YP_006531077.1 )

Dihydrolipoamide dehydrogenase

NC_018220
(Pseudomonas putida DOT-T1E)

6e-80

381) lpdG
( NP_746304.1 )

dihydrolipoamide dehydrogenase

NC_002947
(Pseudomonas putida KT2440)

6e-80

382) B479_17855
( YP_007230406.1 )

dihydrolipoamide dehydrogenase

NC_019905
(Pseudomonas putida PC9)

6e-80

383) PPS_3588
( YP_004703011.1 )

dihydrolipoamide dehydrogenase

NC_015733
(Pseudomonas putida S16)

6e-80

384) Plabr_4534
( YP_004272127.1 )

dihydrolipoamide dehydrogenase

NC_015174
(Planctomyces brasiliensis DSM 5305)

2e-79

385) lpd
( YP_008102507.1 )

dihydrolipoyl dehydrogenase

NC_021499
(Pseudomonas resinovorans NBRC 106553)

4e-79

386) Alide_0631
( YP_004125287.1 )

dihydrolipoamide dehydrogenase

NC_014910
(Alicycliphilus denitrificans BC)

5e-79

387) Alide2_0596
( YP_004386528.1 )

dihydrolipoamide dehydrogenase

NC_015422
(Alicycliphilus denitrificans K601)

5e-79

388) M446_6299
( YP_001772999.1 )

dihydrolipoamide dehydrogenase

NC_010511
(Methylobacterium sp. 4-46)

6e-79

389) Hbor_39890
( YP_004044659.1 )

dihydrolipoamide dehydrogenase

NC_014736
(Halogeometricum borinquense DSM 11551)

7e-79

390) Neut_2103
( YP_748290.1 )

dihydrolipoamide dehydrogenase

NC_008344
(Nitrosomonas eutropha C91)

7e-79

391) Sfum_3549
( YP_847654.1 )

dihydrolipoamide dehydrogenase

NC_008554
(Syntrophobacter fumaroxidans MPOB)

1e-78

392) lpd
( YP_003898179.1 )

dihydrolipoyl dehydrogenase

NC_014532
(Halomonas elongata DSM 2581)

1e-78

393) Desca_0393
( YP_004496200.1 )

dihydrolipoamide dehydrogenase

NC_015565
(Desulfotomaculum carboxydivorans CO-1-SRB)

9e-79

394) pdhD
( YP_004916640.1 )

dihydrolipoamide dehydrogenase E3

NC_016112
(Methylomicrobium alcaliphilum 20Z)

3e-78

395) Dred_0365
( YP_001111738.1 )

dihydrolipoamide dehydrogenase

NC_009253
(Desulfotomaculum reducens MI-1)

4e-78

396) H681_13955
( YP_007658201.1 )

dihydrolipoamide dehydrogenase

NC_020829
(Pseudomonas denitrificans ATCC 13867)

4e-78

397) llh_0195
( YP_005874638.1 )

Dihydrolipoamide dehydrogenase of acetoin dehydrogenase

NC_017492
(Lactococcus lactis A76)

5e-78

398) pdhD
( YP_005867458.1 )

pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase

NC_017486
(Lactococcus lactis CV56)

5e-78

399) pdhD
( NP_266215.1 )

dihydrolipoamide dehydrogenase

NC_002662
(Lactococcus lactis IL1403)

5e-78

400) pdhD
( YP_007507362.1 )

lipoamide dehydrogenase component of PDH complex

NC_020450
(Lactococcus lactis IO-1)

5e-78

401) pdhD
( YP_003352513.1 )

pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase

NC_013656
(Lactococcus lactis KF147)

5e-78

402) kw2_0046
( YP_008567723.1 )

dihydrolipoamide dehydrogenase

NC_022369
(Lactococcus lactis KW2)

5e-78

403) pdhD
( YP_006998570.1 )

dihydrolipoamide dehydrogenase

NC_019435
(Lactococcus lactis UC509.9)

5e-78

404) Slin_6035
( YP_003390796.1 )

dihydrolipoamide dehydrogenase

NC_013730
(Spirosoma linguale DSM 74)

5e-78

405) Mfla_2076
( YP_546184.1 )

dihydrolipoamide dehydrogenase

NC_007947
(Methylobacillus flagellatus KT)

5e-78

406) PT7_0839
( YP_004416003.1 )

dihydrolipoamide dehydrogenase

NC_015458
(Pusillimonas sp. T7-7)

5e-78

407) Hbor_02940
( YP_004035343.1 )

dihydrolipoamide dehydrogenase

NC_014729
(Halogeometricum borinquense DSM 11551)

5e-78

408) lpdA2
( YP_007030796.1 )

dihydrolipoyl dehydrogenase

NC_019670
(Pseudomonas sp. UW4)

5e-78

409) pdhD
( YP_001031433.1 )

dihydrolipoamide dehydrogenase

NC_009004
(Lactococcus lactis MG1363)

6e-78

410) LLNZ_00350
( YP_006355512.1 )

dihydrolipoamide dehydrogenase

NC_017949
(Lactococcus lactis NZ9000)

6e-78

411) LACR_0048
( YP_808098.1 )

dihydrolipoamide dehydrogenase

NC_008527
(Lactococcus lactis SK11)

6e-78

412) lpdG
( YP_007999050.1 )

dihydrolipoamide dehydrogenase LpdG

NC_021237
(Pseudomonas fluorescens CHA0)

6e-78

413) lpdA_1
( YP_258846.1 )

dihydrolipoamide dehydrogenase

NC_004129
(Pseudomonas protegens Pf-5)

6e-78

414) Mrub_2323
( YP_003508094.1 )

dihydrolipoamide dehydrogenase

NC_013946
(Meiothermus ruber DSM 1279)

1e-77

415) K649_10915
( YP_007880972.1 )

dihydrolipoamide dehydrogenase

NC_021081
(Meiothermus ruber DSM 1279)

1e-77

416) MDS_2262
( YP_004380045.1 )

dihydrolipoamide dehydrogenase

NC_015410
(Pseudomonas mendocina NK-01)

1e-77

417) Mmol_0656
( YP_003048093.1 )

dihydrolipoamide dehydrogenase

NC_012968
(Methylotenera mobilis JLW8)

2e-77

418) lpd
( YP_005324393.1 )

dihydrolipoyl dehydrogenase

NC_016940
(Saprospira grandis Lewin)

1e-77

419) Ththe16_0157
( YP_005639720.1 )

dihydrolipoamide dehydrogenase

NC_017272
(Thermus thermophilus SG0.5JP17-16)

1e-77

420) lpdA
( YP_001727704.1 )

dihydrolipoamide dehydrogenase

NC_010471
(Leuconostoc citreum KM20)

2e-77

421) PADK2_17770
( YP_006483535.1 )

dihydrolipoamide dehydrogenase

NC_018080
(Pseudomonas aeruginosa DK2)

2e-77

422) lpdG
( YP_002441323.1 )

dihydrolipoamide dehydrogenase

NC_011770
(Pseudomonas aeruginosa LESB58)

2e-77

423) lpdG
( YP_005976045.1 )

dihydrolipoamide dehydrogenase

NC_017548
(Pseudomonas aeruginosa M18)

2e-77

424) lpdG
( YP_005980721.1 )

dihydrolipoamide dehydrogenase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

2e-77

425) lpdA1
( YP_001349041.1 )

dihydrolipoamide dehydrogenase

NC_009656
(Pseudomonas aeruginosa PA7)

2e-77

426) lpdG
( NP_250278.1 )

dihydrolipoamide dehydrogenase

NC_002516
(Pseudomonas aeruginosa PAO1)

2e-77

427) M062_08470
( YP_008132138.1 )

dihydrolipoamide dehydrogenase

NC_021577
(Pseudomonas aeruginosa RP73)

2e-77

428) lpdG
( YP_791664.1 )

dihydrolipoamide dehydrogenase

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-77

429) Pmen_2501
( YP_001187989.1 )

dihydrolipoamide dehydrogenase

NC_009439
(Pseudomonas mendocina ymp)

3e-77

430) TCCBUS3UF1_20460
( YP_005655158.1 )

Dihydrolipoyl dehydrogenase

NC_017278
(Thermus sp. CCB_US3_UF1)

5e-77

431) Deipr_0027
( YP_004254823.1 )

dihydrolipoamide dehydrogenase

NC_015161
(Deinococcus proteolyticus MRP)

5e-77

432) LCGT_0029
( YP_004778206.1 )

dihydrolipoamide dehydrogenase E3 subunit

NC_015930
(Lactococcus garvieae ATCC 49156)

7e-77

433) LCGL_0029
( YP_005869773.1 )

dihydrolipoamide dehydrogenase E3 subunit

NC_017490
(Lactococcus garvieae Lg2)

7e-77

434) Emtol_1014
( YP_006872191.1 )

dihydrolipoamide dehydrogenase

NC_018748
(Emticicia oligotrophica DSM 17448)

7e-77

435) lpdA
( NP_280867.1 )

LpdA

NC_002607
(Halobacterium salinarum NRC-1)

9e-77

436) lpdA
( YP_001689993.1 )

dihydrolipoamide dehydrogenase ( glycine cleavage system protein L and E3 component of branched-chain amino acid dehydrogenase)

NC_010364
(Halobacterium salinarum R1)

9e-77

437) Bpet3508
( YP_001632119.1 )

dihydrolipoamide dehydrogenase

NC_010170
(Bordetella petrii DSM 12804)

1e-76

438) G655_17275
( YP_007710295.1 )

dihydrolipoamide dehydrogenase

NC_020912
(Pseudomonas aeruginosa B136-33)

1e-76

439) Hmuk_0985
( YP_003176821.1 )

dihydrolipoamide dehydrogenase

NC_013202
(Halomicrobium mukohataei DSM 12286)

2e-76

440) Sinac_6538
( YP_007206308.1 )

dihydrolipoamide dehydrogenase

NC_019892
(Singulisphaera acidiphila DSM 18658)

3e-76

441) Geob_1950
( YP_002537408.1 )

dihydrolipoamide dehydrogenase

NC_011979
(Geobacter daltonii FRC-32)

3e-76

442) lpd
( YP_004618155.1 )

dihydrolipoamide dehydrogenase

NC_015677
(Ramlibacter tataouinensis TTB310)

4e-76

443) TM1040_2775
( YP_614769.1 )

dihydrolipoamide dehydrogenase

NC_008044
(Ruegeria sp. TM1040)

5e-76

444) Ppro_1030
( YP_900714.1 )

dihydrolipoamide dehydrogenase

NC_008609
(Pelobacter propionicus DSM 2379)

5e-76

445) Dgeo_0353
( YP_603825.1 )

dihydrolipoamide dehydrogenase

NC_008025
(Deinococcus geothermalis DSM 11300)

1e-75

446) lpdA2
( YP_003709365.1 )

2-oxoglutarate dehydrogenase E3 component

NC_014225
(Waddlia chondrophila WSU 86-1044)

3e-75

447) Mnod_7193
( YP_002502236.1 )

dihydrolipoamide dehydrogenase

NC_011894
(Methylobacterium nodulans ORS 2060)

3e-75

448) Belba_1343
( YP_006406722.1 )

dihydrolipoamide dehydrogenase

NC_018010
(Belliella baltica DSM 15883)

3e-75

449) M446_1241
( YP_001768199.1 )

dihydrolipoamide dehydrogenase

NC_010511
(Methylobacterium sp. 4-46)

5e-75

450) PSF113_2343
( YP_005207749.1 )

dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase

NC_016830
(Pseudomonas fluorescens F113)

5e-75

451) lpdA
( NP_891227.1 )

dihydrolipoamide dehydrogenase

NC_002927
(Bordetella bronchiseptica RB50)

5e-75

452) FAES_1864
( YP_007320466.1 )

dihydrolipoamide dehydrogenase

NC_020054
(Fibrella aestuarina BUZ 2)

6e-75

453) lpdA
( YP_006969765.1 )

dihydrolipoamide dehydrogenase

NC_019382
(Bordetella bronchiseptica 253)

6e-75

454) lpdA
( YP_005588858.1 )

dihydrolipoamide dehydrogenase

NC_017223
(Bordetella pertussis CS)

6e-75

455) lpdA
( NP_879460.1 )

dihydrolipoamide dehydrogenase

NC_002929
(Bordetella pertussis Tohama I)

6e-75

456) Deipe_0915
( YP_007180250.1 )

dihydrolipoamide dehydrogenase

NC_019793
(Deinococcus peraridilitoris DSM 19664)

1e-74

457) Deipe_1175
( YP_007180497.1 )

dihydrolipoamide dehydrogenase

NC_019793
(Deinococcus peraridilitoris DSM 19664)

1e-74

458) lpdA
( YP_002250270.1 )

dihydrolipoamide dehydrogenase

NC_011297
(Dictyoglomus thermophilum H-6-12)

1e-74

459) bkdC
( YP_259638.1 )

dihydrolipoamide dehydrogenase

NC_004129
(Pseudomonas protegens Pf-5)

1e-74

460) lpdA
( YP_006902589.1 )

dihydrolipoamide dehydrogenase

NC_018829
(Bordetella bronchiseptica MO149)

1e-74

461) Dtur_0515
( YP_002352422.1 )

dihydrolipoamide dehydrogenase

NC_011661
(Dictyoglomus turgidum DSM 6724)

7e-75

462) lpdA
( YP_006898020.1 )

dihydrolipoamide dehydrogenase

NC_018828
(Bordetella parapertussis Bpp5)

7e-75

463) Hbal_1617
( YP_003060002.1 )

dihydrolipoamide dehydrogenase

NC_012982
(Hirschia baltica ATCC 59814)

9e-75

464) lpdA
( YP_007893926.1 )

dihydrolipoamide dehydrogenase

NC_021149
(Azotobacter vinelandii CA)

9e-75

465) lpdA
( YP_007898975.1 )

dihydrolipoamide dehydrogenase

NC_021150
(Azotobacter vinelandii CA6)

9e-75

466) lpdA
( YP_002800116.1 )

dihydrolipoamide dehydrogenase

NC_012560
(Azotobacter vinelandii DJ)

9e-75

467) lpdV
( YP_007999869.1 )

dihydrolipoyl dehydrogenase LpdV

NC_021237
(Pseudomonas fluorescens CHA0)

9e-75

468) lpdA
( YP_679939.1 )

dihydrolipoyl dehydrogenanse

NC_008255
(Cytophaga hutchinsonii ATCC 33406)

1e-74

469) Deide_20540
( YP_002786824.1 )

dihydrolipoamide dehydrogenase

NC_012526
(Deinococcus deserti VCD115)

1e-74

470) lpd
( YP_047424.1 )

dihydrolipoamide dehydrogenase

NC_005966
(Acinetobacter sp. ADP1)

1e-74

471) Q91_1906
( YP_006838443.1 )

dihydrolipoamide dehydrogenase protein

NC_018697
(Cycloclasticus sp. P1; MCCC 1A01040)

2e-74

472) CYCME_0534
( YP_008373234.1 )

Dihydrolipoamide dehydrogenase

NC_021917
(Cycloclasticus zancles 7-ME)

3e-74

473) Mesil_1132
( YP_003684544.1 )

dihydrolipoamide dehydrogenase

NC_014212
(Meiothermus silvanus DSM 9946)

3e-74

474) M301_0676
( YP_003673637.1 )

dihydrolipoamide dehydrogenase

NC_014207
(Methylotenera versatilis 301)

4e-74

475) Sfum_2645
( YP_846758.1 )

dihydrolipoamide dehydrogenase

NC_008554
(Syntrophobacter fumaroxidans MPOB)

4e-74

476) AMBLS11_13920
( YP_006825808.1 )

dihydrolipoamide dehydrogenase

NC_018692
(Alteromonas macleodii Black Sea 11)

1e-73

477) P700755_003352
( YP_006868743.1 )

dihydrolipoamide dehydrogenase

NC_018721
(Psychroflexus torquis ATCC 700755)

6e-74

478) pdhD
( YP_001107788.1 )

dihydrolipoamide dehydrogenase

NC_009142
(Saccharopolyspora erythraea NRRL 2338)

7e-74

479) RMB_04265
( YP_005302104.1 )

dihydrolipoamide dehydrogenase

NC_016931
(Rickettsia massiliae AZT80)

9e-74

480) Hoch_4996
( YP_003269378.1 )

dihydrolipoamide dehydrogenase

NC_013440
(Haliangium ochraceum DSM 14365)

1e-73

481) PPS_3808
( YP_004703229.1 )

dihydrolipoyl dehydrogenase

NC_015733
(Pseudomonas putida S16)

1e-73

482) bkdC
( YP_008112394.1 )

dihydrolipoyl dehydrogenase BkdC

NC_021505
(Pseudomonas putida NBRC 14164)

1e-73

483) ambt_02325
( YP_004465821.1 )

dihydrolipoamide dehydrogenase

NC_015554
(Alteromonas sp. SN2)

1e-73

484) Celal_3632
( YP_004166385.1 )

dihydrolipoamide dehydrogenase

NC_014934
(Cellulophaga algicola DSM 14237)

2e-73

485) Msip34_0657
( YP_003050432.1 )

dihydrolipoamide dehydrogenase

NC_012969
(Methylovorus glucosetrophus SIP3-4)

2e-73

486) lpd
( YP_004039102.1 )

dihydrolipoamide dehydrogenase

NC_014733
(Methylovorus sp. MP688)

2e-73

487) A1C_04135
( YP_001493608.1 )

dihydrolipoamide dehydrogenase

NC_009881
(Rickettsia akari Hartford)

2e-73

488) MASE_14015
( YP_006748861.1 )

dihydrolipoamide dehydrogenase

NC_018632
(Alteromonas macleodii ATCC 27126)

2e-73

489) AMBAS45_14535
( YP_006803851.1 )

dihydrolipoamide dehydrogenase

NC_018679
(Alteromonas macleodii Balearic Sea AD45)

2e-73

490) AMEC673_14340
( YP_006799927.1 )

dihydrolipoamide dehydrogenase

NC_018678
(Alteromonas macleodii English Channel 673)

2e-73

491) Deipr_2271
( YP_004264257.1 )

dihydrolipoamide dehydrogenase

NC_015169
(Deinococcus proteolyticus MRP)

3e-73

492) lpd
( YP_003455233.1 )

lipoamide dehydrogenase, E3 component is part of three enzyme complexes

NC_013861
(Legionella longbeachae NSW150)

3e-73

493) lpdA
( YP_115390.1 )

pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase

NC_002977
(Methylococcus capsulatus Bath)

3e-73

494) L483_24365
( YP_008096634.1 )

dihydrolipoamide dehydrogenase

NC_021491
(Pseudomonas putida H8234)

3e-73

495) pdhD
( YP_265659.1 )

dihydrolipoyl dehydrogenase

NC_007205
(Candidatus Pelagibacter ubique HTCC1062)

3e-73

496) Rh054_04095
( YP_004764432.1 )

dihydrolipoamide dehydrogenase

NC_015866
(Rickettsia heilongjiangensis 054)

3e-73

497) lpdA2
( YP_004884904.1 )

dihydrolipoamide dehydrogenase

NC_016050
(Rickettsia japonica YH)

3e-73

498) Lbys_3490
( YP_003999491.1 )

dihydrolipoamide dehydrogenase

NC_014655
(Leadbetterella byssophila DSM 17132)

4e-73

499) lpd
( YP_001202603.1 )

dihydrolipoamide dehydrogenase

NC_009445
(Bradyrhizobium sp. ORS278)

4e-73

500) Hneap_1554
( YP_003263431.1 )

dihydrolipoamide dehydrogenase

NC_013422
(Halothiobacillus neapolitanus c2)

4e-73

501) MCC_04805
( YP_005390575.1 )

dihydrolipoamide dehydrogenase

NC_017042
(Rickettsia rhipicephali 3-7-female6-CWPP)

4e-73

502) PputW619_3745
( YP_001750596.1 )

dihydrolipoamide dehydrogenase

NC_010501
(Pseudomonas putida W619)

5e-73

503) Nham_0537
( YP_575887.1 )

dihydrolipoamide dehydrogenase

NC_007964
(Nitrobacter hamburgensis X14)

6e-73

504) MCE_05475
( YP_005365579.1 )

dihydrolipoamide dehydrogenase

NC_017028
(Candidatus Rickettsia amblyommii GAT-30V)

6e-73

505) I633_15470
( YP_008193515.1 )

dihydrolipoamide dehydrogenase

NC_021716
(Alteromonas macleodii English Channel 615)

7e-73

506) lpdA2
( YP_001499464.1 )

dihydrolipoamide dehydrogenase

NC_009900
(Rickettsia massiliae MTU5)

7e-73

507) lpdA
( YP_007150.1 )

dihydrolipoamide dehydrogenase

NC_005861
(Candidatus Protochlamydia amoebophila UWE25)

1e-72

508) lpdV
( YP_609358.1 )

dihydrolipoamide dehydrogenase

NC_008027
(Pseudomonas entomophila L48)

1e-72

509) PputGB1_3965
( YP_001670191.1 )

dihydrolipoamide dehydrogenase

NC_010322
(Pseudomonas putida GB-1)

1e-72

510) Rsph17025_0074
( YP_001166291.1 )

dihydrolipoamide dehydrogenase

NC_009428
(Rhodobacter sphaeroides ATCC 17025)

1e-72

511) lpdG
( YP_004996415.1 )

dihydrolipoamide dehydrogenase

NC_016603
(Acinetobacter calcoaceticus PHEA-2)

1e-72

512) lpdA2
( YP_002845341.1 )

dihydrolipoamide dehydrogenase

NC_012633
(Rickettsia africae ESF-5)

1e-72

513) MC1_04350
( YP_005393019.1 )

dihydrolipoamide dehydrogenase

NC_017044
(Rickettsia parkeri Portsmouth)

1e-72

514) lpdV
( YP_005929316.1 )

LpdV

NC_017530
(Pseudomonas putida BIRD-1)

8e-73

515) MADE_1014970
( YP_004428126.1 )

dihydrolipoamide dehydrogenase

NC_011138
(Alteromonas macleodii Deep ecotype)

8e-73

516) Mmc1_2397
( YP_866303.1 )

dihydrolipoamide dehydrogenase

NC_008576
(Magnetococcus marinus MC-1)

9e-73

517) RPR_05390
( YP_002916722.1 )

dihydrolipoamide dehydrogenase

NC_012730
(Rickettsia peacockii Rustic)

9e-73

518) lpd
( YP_001706362.1 )

dihydrolipoamide dehydrogenase

NC_010400
(Acinetobacter baumannii SDF)

2e-72

519) lpdA
( YP_002320445.1 )

dihydrolipoamide dehydrogenase

NC_011586
(Acinetobacter baumannii AB0057)

2e-72

520) lpdA
( YP_002324682.1 )

dihydrolipoamide dehydrogenase

NC_011595
(Acinetobacter baumannii AB307-0294)

2e-72

521) ACICU_02953
( YP_001847612.1 )

dihydrolipoamide dehydrogenase

NC_010611
(Acinetobacter baumannii ACICU)

2e-72

522) lpd
( YP_001712741.1 )

dihydrolipoamide dehydrogenase

NC_010410
(Acinetobacter baumannii AYE)

2e-72

523) BJAB07104_03037
( YP_008210500.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component-related enzyme

NC_021726
(Acinetobacter baumannii BJAB07104)

2e-72

524) BJAB0715_03081
( YP_008218229.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component-related enzyme

NC_021733
(Acinetobacter baumannii BJAB0715)

2e-72

525) BJAB0868_02921
( YP_008214245.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component-related enzyme

NC_021729
(Acinetobacter baumannii BJAB0868)

2e-72

526) lpd
( YP_007597196.1 )

dihydrolipoamide dehydrogenase

NC_020547
(Acinetobacter baumannii D1279779)

2e-72

527) ABTJ_00758
( YP_006288686.1 )

dihydrolipoamide dehydrogenase

NC_017847
(Acinetobacter baumannii MDR-TJ)

2e-72

528) M3Q_3186
( YP_006849504.1 )

dihydrolipoamide dehydrogenase

NC_018706
(Acinetobacter baumannii TYTH-1)

2e-72

529) M3Q_3313
( YP_006849629.1 )

dihydrolipoamide dehydrogenase

NC_018706
(Acinetobacter baumannii TYTH-1)

2e-72

530) RSA_04265
( YP_005300860.1 )

dihydrolipoamide dehydrogenase

NC_016930
(Rickettsia philipii 364D)

2e-72

531) lpdA2
( YP_005065920.1 )

Dihydrolipoamide dehydrogenase

NC_016639
(Rickettsia slovaca 13-B)

2e-72

532) MC3_04300
( YP_005426512.1 )

dihydrolipoamide dehydrogenase

NC_017065
(Rickettsia slovaca D-CWPP)

2e-72

533) PSEBR_a3381
( YP_004354707.1 )

dihydrolipoyl dehydrogenase

NC_015379
(Pseudomonas brassicacearum NFM421)

3e-72

534) Isop_0046
( YP_004177192.1 )

dihydrolipoamide dehydrogenase

NC_014962
(Isosphaera pallida ATCC 43644)

3e-72

535) ABK1_3007
( YP_005515579.1 )

Dihydrolipoamide dehydrogenase

NC_017162
(Acinetobacter baumannii 1656-2)

3e-72

536) ABZJ_03132
( YP_005527088.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

3e-72

537) ABTW07_3176
( YP_005800053.1 )

dihydrolipoamide dehydrogenase

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

3e-72

538) lpdA1
( YP_007698120.1 )

dihydrolipoyl dehydrogenase E3 component of2-oxoglutarate dehydrogenase complex

NC_020908
(Octadecabacter arcticus 238)

3e-72

539) FB2170_12491
( YP_003863356.1 )

dihydrolipoyl dehydrogenase

NC_014472
(Maribacter sp. HTCC2170)

4e-72

540) Swit_0779
( YP_001261284.1 )

dihydrolipoamide dehydrogenase

NC_009511
(Sphingomonas wittichii RW1)

4e-72

541) GM18_3645
( YP_004200349.1 )

dihydrolipoamide dehydrogenase

NC_014973
(Geobacter sp. M18)

4e-72

542) AOLE_03725
( YP_003731017.1 )

dihydrolipoamide dehydrogenase

NC_014259
(Acinetobacter oleivorans DR1)

4e-72

543) YSA_07988
( YP_006388210.1 )

dihydrolipoamide dehydrogenase

NC_017986
(Pseudomonas putida ND6)

4e-72

544) RPO_04325
( YP_005287690.1 )

dihydrolipoamide dehydrogenase

NC_016909
(Rickettsia rickettsii Arizona)

4e-72

545) RPL_04305
( YP_005286341.1 )

dihydrolipoamide dehydrogenase

NC_016908
(Rickettsia rickettsii Colombia)

4e-72

546) RPM_04295
( YP_005289042.1 )

dihydrolipoamide dehydrogenase

NC_016911
(Rickettsia rickettsii Hauke)

4e-72

547) RPJ_04280
( YP_005294180.1 )

dihydrolipoamide dehydrogenase

NC_016914
(Rickettsia rickettsii Hino)

4e-72

548) RPK_02220
( YP_005295136.1 )

dihydrolipoamide dehydrogenase

NC_016915
(Rickettsia rickettsii Hlp#2)

4e-72

549) RrIowa_0912
( YP_001650144.1 )

dihydrolipoamide dehydrogenase

NC_010263
(Rickettsia rickettsii Iowa)

4e-72

550) lpdA1
( YP_005356865.1 )

Dihydrolipoyl dehydrogenase

NC_017025
(Flavobacterium indicum GPTSA100-9)

5e-72

551) Caul_1873
( YP_001683500.1 )

dihydrolipoamide dehydrogenase

NC_010338
(Caulobacter sp. K31)

5e-72

552) Alvin_0803
( YP_003442782.1 )

dihydrolipoamide dehydrogenase

NC_013851
(Allochromatium vinosum DSM 180)

5e-72

553) Rpdx1_0453
( YP_004106827.1 )

dihydrolipoamide dehydrogenase

NC_014834
(Rhodopseudomonas palustris DX-1)

5e-72

554) A1I_03305
( YP_001496059.1 )

dihydrolipoamide dehydrogenase

NC_009883
(Rickettsia bellii OSU 85-389)

6e-72

555) lpdA2
( YP_537748.1 )

dihydrolipoamide dehydrogenase

NC_007940
(Rickettsia bellii RML369-C)

6e-72

556) Nwi_0425
( YP_317044.1 )

dihydrolipoamide dehydrogenase

NC_007406
(Nitrobacter winogradskyi Nb-255)

6e-72

557) lpdV
( NP_746518.1 )

dihydrolipoamide dehydrogenase

NC_002947
(Pseudomonas putida KT2440)

6e-72

558) Oweho_1797
( YP_004989422.1 )

dihydrolipoamide dehydrogenase

NC_016599
(Owenweeksia hongkongensis DSM 17368)

1e-71

559) Runsl_3005
( YP_004656522.1 )

dihydrolipoamide dehydrogenase

NC_015703
(Runella slithyformis DSM 19594)

1e-71

560) Pedsa_2463
( YP_004274830.1 )

dihydrolipoamide dehydrogenase

NC_015177
(Pedobacter saltans DSM 12145)

7e-72

561) Marky_1857
( YP_004368698.1 )

dihydrolipoamide dehydrogenase

NC_015387
(Marinithermus hydrothermalis DSM 14884)

7e-72

562) lpdV
( YP_006535720.1 )

Dihydrolipoyl dehydrogenase

NC_018220
(Pseudomonas putida DOT-T1E)

7e-72

563) DLD
( YP_004652036.1 )

dihydrolipoyl dehydrogenase

NC_015702
(Parachlamydia acanthamoebae UV-7)

8e-72

564) Pput_1450
( YP_001266792.1 )

dihydrolipoamide dehydrogenase

NC_009512
(Pseudomonas putida F1)

8e-72

565) lpd
( YP_001236591.1 )

dihydrolipoamide dehydrogenase

NC_009485
(Bradyrhizobium sp. BTAi1)

9e-72

566) lpd2
( YP_004692023.1 )

dihydrolipoyl dehydrogenase

NC_015730
(Roseobacter litoralis Och 149)

1e-71

567) PB2503_08934
( YP_003854982.1 )

2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase

NC_014414
(Parvularcula bermudensis HTCC2503)

2e-71

568) S58_04170
( YP_007510020.1 )

dihydrolipoamide dehydrogenase

NC_020453
(Bradyrhizobium oligotrophicum S58)

2e-71

569) lpdA
( YP_005447728.1 )

dihydrolipoamide dehydrogenase

NC_017082
(Bradyrhizobium sp. S23321)

2e-71

570) GWCH70_2306
( YP_002950276.1 )

dihydrolipoamide dehydrogenase

NC_012793
(Geobacillus sp. WCH70)

2e-71

571) RPB_0274
( YP_483896.1 )

dihydrolipoamide dehydrogenase

NC_007778
(Rhodopseudomonas palustris HaA2)

2e-71

572) lpdA1
( YP_004843874.1 )

dihydrolipoyl dehydrogenase

NC_016001
(Flavobacterium branchiophilum FL-15)

3e-71

573) Phep_3710
( YP_003093963.1 )

dihydrolipoamide dehydrogenase

NC_013061
(Pedobacter heparinus DSM 2366)

3e-71

574) lpdA1
( YP_001296609.1 )

Dihydrolipoyl dehydrogenase

NC_009613
(Flavobacterium psychrophilum JIP02/86)

4e-71

575) RPE_0290
( YP_779229.1 )

dihydrolipoamide dehydrogenase

NC_008435
(Rhodopseudomonas palustris BisA53)

4e-71

576) lpdA
( YP_681916.1 )

dihydrolipoamide dehydrogenase

NC_008209
(Roseobacter denitrificans OCh 114)

4e-71

577) PFLU3967
( YP_002873518.1 )

dihydrolipoamide dehydrogenase

NC_012660
(Pseudomonas fluorescens SBW25)

5e-71

578) Echvi_0770
( YP_007223055.1 )

dihydrolipoamide dehydrogenase

NC_019904
(Echinicola vietnamensis DSM 17526)

1e-70

579) lpdA
( YP_325715.1 )

dihydrolipoamide dehydrogenase

NC_007426
(Natronomonas pharaonis DSM 2160)

5e-71

580) JCM7686_2588
( YP_008405456.1 )

dihydrolipoamide dehydrogenase

NC_022041
(Paracoccus aminophilus JCM 7686)

7e-71

581) H681_13020
( YP_007658014.1 )

dihydrolipoamide dehydrogenase

NC_020829
(Pseudomonas denitrificans ATCC 13867)

7e-71

582) BJ6T_04180
( YP_005605304.1 )

dihydrolipoamide dehydrogenase

NC_017249
(Bradyrhizobium japonicum USDA 6)

7e-71

583) Bind_3609
( YP_001834653.1 )

dihydrolipoamide dehydrogenase

NC_010581
(Beijerinckia indica ATCC 9039)

8e-71

584) Marky_0707
( YP_004367567.1 )

dihydrolipoamide dehydrogenase

NC_015387
(Marinithermus hydrothermalis DSM 14884)

9e-71

585) lpdA
( NP_767089.1 )

dihydrolipoamide dehydrogenase

NC_004463
(Bradyrhizobium japonicum USDA 110)

1e-70

586) Desmer_3859
( YP_006623566.1 )

dihydrolipoamide dehydrogenase

NC_018515
(Desulfosporosinus meridiei DSM 13257)

1e-70

587) Nit79A3_1949
( YP_004695146.1 )

dihydrolipoamide dehydrogenase

NC_015731
(Nitrosomonas sp. Is79A3)

1e-70

588) H045_11890
( YP_007397939.1 )

dihydrolipoamide dehydrogenase

NC_020209
(Pseudomonas poae RE*1-1-14)

1e-70

589) dldH
( NP_945538.1 )

dihydrolipoamide dehydrogenase

NC_005296
(Rhodopseudomonas palustris CGA009)

1e-70

590) Rpal_0180
( YP_001989218.1 )

dihydrolipoamide dehydrogenase

NC_011004
(Rhodopseudomonas palustris TIE-1)

1e-70

591) Fjoh_2133
( YP_001194480.1 )

dihydrolipoamide dehydrogenase

NC_009441
(Flavobacterium johnsoniae UW101)

2e-70

592) Mmar10_2813
( YP_758032.1 )

dihydrolipoamide dehydrogenase

NC_008347
(Maricaulis maris MCS10)

2e-70

593) Lacal_2231
( YP_004580504.1 )

dihydrolipoamide dehydrogenase

NC_015638
(Lacinutrix sp. 5H-3-7-4)

2e-70

594) bkdC
( YP_006324799.1 )

2-oxoisovalerate dehydrogenase E3 component, dihydrolipoyl dehydrogenase

NC_017911
(Pseudomonas fluorescens A506)

2e-70

595) lpdA
( YP_006259743.1 )

Dihydrolipoyl dehydrogenase

NC_017790
(Deinococcus gobiensis I-0)

2e-70

596) lpd2
( YP_007706195.1 )

dihydrolipoyl dehydrogenase Lpd

NC_020911
(Octadecabacter antarcticus 307)

2e-70

597) Mnod_1130
( YP_002496439.1 )

dihydrolipoamide dehydrogenase

NC_011894
(Methylobacterium nodulans ORS 2060)

3e-70

598) Ftrac_1733
( YP_004053829.1 )

dihydrolipoamide dehydrogenase

NC_014759
(Marivirga tractuosa DSM 4126)

3e-70

599) lpdG
( YP_005883757.1 )

dihydrolipoamide dehydrogenase

NC_017506
(Marinobacter adhaerens HP15)

4e-70

600) lpdA
( NP_969527.1 )

dihydrolipoamide dehydrogenase

NC_005363
(Bdellovibrio bacteriovorus HD100)

4e-70

601) SAR116_1836
( YP_003552163.1 )

dihydrolipoamide dehydrogenase

NC_014010
(Candidatus Puniceispirillum marinum IMCC1322)

5e-70

602) OB1867
( NP_692788.1 )

dihydrolipoamide dehydrogenase

NC_004193
(Oceanobacillus iheyensis HTE831)

6e-70

603) lpdG
( YP_005885215.1 )

dihydrolipoamide dehydrogenase

NC_017506
(Marinobacter adhaerens HP15)

8e-70

604) Mpop_1582
( YP_001924281.1 )

dihydrolipoamide dehydrogenase

NC_010725
(Methylobacterium populi BJ001)

1e-69

605) lpdA
( YP_007023598.1 )

dihydrolipoamide dehydrogenase

NC_019567
(Bdellovibrio bacteriovorus Tiberius)

1e-69

606) RPC_0183
( YP_530077.1 )

dihydrolipoamide dehydrogenase

NC_007925
(Rhodopseudomonas palustris BisB18)

1e-69

607) lpdA-1
( YP_003933680.1 )

2-oxoglutarate dehydrogenase complex, E3 protein, dihydrolipoamide dehydrogenase

NC_011146
(Geobacter bemidjiensis Bem)

2e-69

608) lpdA1
( YP_007029965.1 )

dihydrolipoyl dehydrogenase

NC_019670
(Pseudomonas sp. UW4)

7e-70

609) Solca_3096
( YP_006257285.1 )

dihydrolipoamide dehydrogenase

NC_017770
(Solitalea canadensis DSM 3403)

9e-70

610) lpdA
( YP_005796287.1 )

dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase

NC_017384
(Ketogulonicigenium vulgare WSH-001)

2e-69

611) EIO_0111
( YP_003962601.1 )

dihydrolipoamide dehydrogenase

NC_014625
(Ketogulonicigenium vulgare Y25)

2e-69

612) lpd
( YP_862197.1 )

dihydrolipoamide dehydrogenase

NC_008571
(Gramella forsetii KT0803)

3e-69

613) Nmul_A0855
( YP_411550.1 )

dihydrolipoamide dehydrogenase

NC_007614
(Nitrosospira multiformis ATCC 25196)

3e-69

614) H375_1490
( YP_007750429.1 )

Dihydrolipoyl dehydrogenase

NC_020993
(Rickettsia prowazekii Breinl)

3e-69

615) MA1_02235
( YP_005413058.1 )

dihydrolipoamide dehydrogenase

NC_017056
(Rickettsia prowazekii BuV67-CWPP)

3e-69

616) M9W_02235
( YP_005405550.1 )

dihydrolipoamide dehydrogenase

NC_017049
(Rickettsia prowazekii Chernikova)

3e-69

617) MA3_02260
( YP_005407234.1 )

dihydrolipoamide dehydrogenase

NC_017051
(Rickettsia prowazekii Dachau)

3e-69

618) MA5_03595
( YP_005404973.1 )

dihydrolipoamide dehydrogenase

NC_017048
(Rickettsia prowazekii GvV257)

3e-69

619) M9Y_02240
( YP_005406396.1 )

dihydrolipoamide dehydrogenase

NC_017050
(Rickettsia prowazekii Katsinyian)

3e-69

620) H374_6100
( YP_007749949.1 )

5-formyltetrahydrofolate cyclo-ligase

NC_020992
(Rickettsia prowazekii NMRC Madrid E)

3e-69

621) MA7_02230
( YP_005413893.1 )

dihydrolipoamide dehydrogenase

NC_017057
(Rickettsia prowazekii RpGvF24)

3e-69

622) HIMB5_00000210
( YP_006755971.1 )

dihydrolipoyl dehydrogenase

NC_018643
(alpha proteobacterium HIMB5 HIMB5)

4e-69

623) Mchl_1930
( YP_002420721.1 )

dihydrolipoamide dehydrogenase

NC_011757
(Methylobacterium chloromethanicum CM4)

5e-69

624) lpd
( YP_002962681.1 )

dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes

NC_012808
(Methylobacterium extorquens AM1)

5e-69

625) RPD_0550
( YP_567689.1 )

dihydrolipoamide dehydrogenase

NC_007958
(Rhodopseudomonas palustris BisB5)

5e-69

626) Murru_3269
( YP_004789710.1 )

dihydrolipoamide dehydrogenase

NC_015945
(Muricauda ruestringensis DSM 13258)

7e-69

627) lpd
( YP_003067864.1 )

dihydrolipoamide dehydrogenase, FAD/NAD

NC_012988
(Methylobacterium extorquens DM4)

7e-69

628) Celly_3023
( YP_004263711.1 )

dihydrolipoamide dehydrogenase

NC_015167
(Cellulophaga lytica DSM 7489)

1e-68

629) GM21_0718
( YP_003020550.1 )

dihydrolipoamide dehydrogenase

NC_012918
(Geobacter sp. M21)

1e-68

630) Mext_1648
( YP_001639118.1 )

dihydrolipoamide dehydrogenase

NC_010172
(Methylobacterium extorquens PA1)

7e-69

631) lpdA
( YP_165603.1 )

2-oxoglutarate dehydrogenase E3

NC_003911
(Ruegeria pomeroyi DSS-3)

7e-69

632) BJAB0715_01922
( YP_008217070.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component-related enzyme

NC_021733
(Acinetobacter baumannii BJAB0715)

1e-68

633) lpd
( YP_861243.1 )

dihydrolipoamide dehydrogenase

NC_008571
(Gramella forsetii KT0803)

2e-68

634) G655_25475
( YP_007711925.1 )

dihydrolipoamide dehydrogenase

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-68

635) lpd3
( YP_002442792.1 )

dihydrolipoamide dehydrogenase

NC_011770
(Pseudomonas aeruginosa LESB58)

2e-68

636) SPISAL_00205
( YP_008045607.1 )

dihydrolipoamide dehydrogenase

NC_021291
(Spiribacter salinus M19-40)

2e-68

637) Cycma_2502
( YP_004774472.1 )

dihydrolipoamide dehydrogenase

NC_015914
(Cyclobacterium marinum DSM 745)

3e-68

638) Pfl01_3466
( YP_349195.1 )

dihydrolipoamide dehydrogenase

NC_007492
(Pseudomonas fluorescens Pf0-1)

3e-68

639) lpd3
( YP_793295.1 )

dihydrolipoamide dehydrogenase

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

3e-68

640) RSPPHO_02123
( YP_005417719.1 )

Dihydrolipoamide dehydrogenase

NC_017059
(Rhodospirillum photometricum DSM 122)

4e-68

641) lpd
( YP_002759988.1 )

dihydrolipoamide dehydrogenase

NC_012489
(Gemmatimonas aurantiaca T-27)

4e-68

642) RPN_02635
( YP_005292524.1 )

dihydrolipoamide dehydrogenase

NC_016913
(Rickettsia rickettsii Brazil)

4e-68

643) A1G_04340
( YP_001494880.1 )

dihydrolipoamide dehydrogenase

NC_009882
(Rickettsia rickettsii Sheila Smith)

4e-68

644) acoD
( YP_007596241.1 )

dihydrolipoamide dehydrogenase

NC_020547
(Acinetobacter baumannii D1279779)

5e-68

645) PADK2_25630
( YP_006485091.1 )

dihydrolipoamide dehydrogenase

NC_018080
(Pseudomonas aeruginosa DK2)

6e-68

646) lpd3
( YP_005977522.1 )

dihydrolipoamide dehydrogenase

NC_017548
(Pseudomonas aeruginosa M18)

6e-68

647) lpd3
( YP_005978972.1 )

dihydrolipoamide dehydrogenase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

6e-68

648) lpd3
( NP_253516.1 )

dihydrolipoamide dehydrogenase

NC_002516
(Pseudomonas aeruginosa PAO1)

6e-68

649) M062_25490
( YP_008135478.1 )

dihydrolipoamide dehydrogenase

NC_021577
(Pseudomonas aeruginosa RP73)

6e-68

650) lpdA2
( NP_387154.1 )

dihydrolipoamide dehydrogenase

NC_003047
(Sinorhizobium meliloti 1021)

6e-68

651) lpdA2
( YP_007576320.1 )

putative dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) transmembrane protein

NC_020528
(Sinorhizobium meliloti 2011)

6e-68

652) Hhal_1035
( YP_001002613.1 )

dihydrolipoamide dehydrogenase

NC_008789
(Halorhodospira halophila SL1)

7e-68

653) ABK1_2197
( YP_005514769.1 )

Dihydrolipoamide dehydrogenase

NC_017162
(Acinetobacter baumannii 1656-2)

7e-68

654) ACICU_01738
( YP_001846397.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component

NC_010611
(Acinetobacter baumannii ACICU)

7e-68

655) BJAB07104_02013
( YP_008209476.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component-related enzyme

NC_021726
(Acinetobacter baumannii BJAB07104)

7e-68

656) BJAB0868_01861
( YP_008213185.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component-related enzyme

NC_021729
(Acinetobacter baumannii BJAB0868)

7e-68

657) ABTJ_01970
( YP_006289868.1 )

dihydrolipoamide dehydrogenase

NC_017847
(Acinetobacter baumannii MDR-TJ)

7e-68

658) ABZJ_01903
( YP_005525859.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

7e-68

659) ABTW07_1951
( YP_005798838.1 )

pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

7e-68

660) M3Q_2089
( YP_006848412.1 )

dihydrolipoamide dehydrogenase

NC_018706
(Acinetobacter baumannii TYTH-1)

7e-68

661) Fraau_1674
( YP_005377767.1 )

dihydrolipoamide dehydrogenase

NC_017033
(Frateuria aurantia DSM 6220)

8e-68

662) TtJL18_0169
( YP_006057871.1 )

dihydrolipoamide dehydrogenase

NC_017587
(Thermus thermophilus JL-18)

1e-67

663) Riean_0476
( YP_004045150.1 )

dihydrolipoamide dehydrogenase

NC_014738
(Riemerella anatipestifer ATCC 11845)

1e-67

664) RA0C_0698
( YP_005394200.1 )

dihydrolipoamide dehydrogenase

NC_017045
(Riemerella anatipestifer ATCC 11845)

1e-67

665) G148_1144
( YP_007356142.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component,-related enzyme

NC_020125
(Riemerella anatipestifer RA-CH-2)

1e-67

666) MY9_2424
( YP_006232213.1 )

dihydrolipoamide dehydrogenase

NC_017743
(Bacillus sp. JS)

1e-67

667) FCOL_01135
( YP_004940869.1 )

dihydrolipoyl dehydrogenase

NC_016510
(Flavobacterium columnare ATCC 49512)

1e-67

668) PSE_0619
( YP_005079153.1 )

dihydrolipoamide dehydrogenase

NC_016642
(Pseudovibrio sp. FO-BEG1)

2e-67

669) A11Q_1817
( YP_007645640.1 )

dihydrolipoamide dehydrogenase

NC_020813
(Bdellovibrio exovorus JSS)

2e-67

670) Coch_2179
( YP_003142284.1 )

dihydrolipoamide dehydrogenase

NC_013162
(Capnocytophaga ochracea DSM 7271)

2e-67

671) lpdA2
( YP_006837961.1 )

2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogen ase

NC_018697
(Cycloclasticus sp. P1; MCCC 1A01040)

2e-67

672) CYCME_1044
( YP_008373735.1 )

Dihydrolipoamide dehydrogenase

NC_021917
(Cycloclasticus zancles 7-ME)

2e-67

673) Desor_4829
( YP_004972745.1 )

dihydrolipoamide dehydrogenase

NC_016584
(Desulfosporosinus orientis DSM 765)

2e-67

674) MROS_0857
( YP_006527111.1 )

pyruvate dehydrogenase E3 component

NC_018178
(Melioribacter roseus P3M-2)

2e-67

675) Pfl01_5671
( YP_351398.1 )

dihydrolipoamide dehydrogenase

NC_007492
(Pseudomonas fluorescens Pf0-1)

2e-67

676) SinmeB_2875
( YP_005715015.1 )

dihydrolipoamide dehydrogenase

NC_017322
(Sinorhizobium meliloti BL225C)

2e-67

677) C770_GR4Chr3185
( YP_007191673.1 )

dihydrolipoamide dehydrogenase

NC_019845
(Sinorhizobium meliloti GR4)

2e-67

678) LPD2
( YP_006841775.1 )

dihydrolipoyl dehydrogenase 2, mitochondrial

NC_018700
(Sinorhizobium meliloti Rm41)

2e-67

679) lpdA2
( YP_005721725.1 )

dihydrolipoamide dehydrogenase

NC_017325
(Sinorhizobium meliloti SM11)

2e-67

680) B739_1540
( YP_006724032.1 )

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component,-related enzyme

NC_018609
(Riemerella anatipestifer RA-CH-1)

2e-67

681) NGTW08_0707
( YP_005889541.1 )

dihydrolipoamide dehydrogenase

NC_017511
(Neisseria gonorrhoeae TCDC-NG08107)

3e-67

682) lpdA3
( YP_005878748.1 )

dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex; dihydrolipoamide dehydrogenase)

NC_017501
(Neisseria meningitidis 8013)

3e-67

683) lpdA3
( YP_005891748.1 )

dihydrolipoyl dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex; dihydrolipoamide dehydrogenase)

NC_017512
(Neisseria meningitidis WUE 2594)

3e-67

684) lpd
( YP_007378716.1 )

dihydrolipoyl dehydrogenase

NC_020156
(Nonlabens dokdonensis DSW-6)

3e-67

685) CC_0342
( NP_419161.1 )

dihydrolipoamide dehydrogenase

NC_002696
(Caulobacter crescentus CB15)

3e-67

686) CCNA_00346
( YP_002515721.1 )

dihydrolipoamide dehydrogenase

NC_011916
(Caulobacter crescentus NA1000)

3e-67

687) Ocepr_1753
( YP_004058379.1 )

dihydrolipoamide dehydrogenase

NC_014761
(Oceanithermus profundus DSM 14977)

4e-67

688) dldH
( NP_865113.1 )

dihydrolipoamide dehydrogenase

NC_005027
(Rhodopirellula baltica SH 1)

4e-67

689) RB2501_14314
( YP_003195851.1 )

pyruvate/2-oxoglutarate dehydrogenase complex

NC_013222
(Robiginitalea biformata HTCC2501)

5e-67

690) NGK_0885
( YP_002001510.1 )

dihydrolipoamide dehydrogenase

NC_011035
(Neisseria gonorrhoeae NCCP11945)

5e-67

691) acoD
( YP_004995332.1 )

dihydrolipoamide dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenase complexes)

NC_016603
(Acinetobacter calcoaceticus PHEA-2)

5e-67

692) Hden_3225
( YP_003757340.1 )

dihydrolipoamide dehydrogenase

NC_014313
(Hyphomicrobium denitrificans ATCC 51888)

5e-67

693) lpdA3
( YP_003083060.1 )

dihydrolipoamide dehydrogenase

NC_013016
(Neisseria meningitidis alpha14)

6e-67

694) Trad_0899
( YP_003704576.1 )

dihydrolipoamide dehydrogenase

NC_014221
(Truepera radiovictrix DSM 17093)

6e-67

695) Plim_3309
( YP_003631321.1 )

dihydrolipoamide dehydrogenase

NC_014148
(Planctomyces limnophilus DSM 3776)

6e-67

696) B479_18925
( YP_007230620.1 )

dihydrolipoamide dehydrogenase

NC_019905
(Pseudomonas putida PC9)

6e-67

697) TTC1753
( YP_005722.1 )

dihydrolipoamide dehydrogenase

NC_005835
(Thermus thermophilus HB27)

1e-66

698) Weevi_1659
( YP_004238934.1 )

dihydrolipoamide dehydrogenase

NC_015144
(Weeksella virosa DSM 16922)

1e-66

699) lpdA3
( YP_001599038.1 )

dihydrolipoamide dehydrogenase

NC_010120
(Neisseria meningitidis 053442)

1e-66

700) NMBB_1673
( YP_005883056.1 )

putative dihydrolipoamide dehydrogenase E3 component

NC_017505
(Neisseria meningitidis alpha710)

1e-66

701) lpd
( YP_006400844.1 )

dihydrolipoyl dehydrogenase Lpd

NC_018000
(Sinorhizobium fredii USDA 257)

1e-66

702) Bsel_2254
( YP_003700324.1 )

dihydrolipoamide dehydrogenase

NC_014219
(Bacillus selenitireducens MLS10)

1e-66

703) I33_2484
( YP_005557410.1 )

dihydrolipoamide dehydrogenase

NC_017195
(Bacillus subtilis RO-NN-1)

1e-66

704) A11S_578
( YP_007642022.1 )

Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase

NC_020812
(Micavibrio aeruginosavorus EPB)

8e-67

705) NGO0915
( YP_208023.1 )

dihydrolipoamide dehydrogenase

NC_002946
(Neisseria gonorrhoeae FA 1090)

9e-67

706) NMBM04240196_1205
( YP_005897905.1 )

dihydrolipoyl dehydrogenase

NC_017515
(Neisseria meningitidis M04-240196)

9e-67

707) lpd
( YP_008102804.1 )

dihydrolipoyl dehydrogenase

NC_021499
(Pseudomonas resinovorans NBRC 106553)

9e-67

708) lpdV
( NP_390286.2 )

dihydrolipoyl dehydrogenase

NC_000964
(Bacillus subtilis 168)

2e-66

709) lpdV
( YP_007534388.1 )

branched-chain alpha-keto acid dehydrogenase E3 subunit dihydrolipoamide dehydrogenase LpdV

NC_020507
(Bacillus subtilis 6051-HGW)

2e-66

710) lpdV
( YP_006630612.1 )

branched-chain alpha-keto acid dehydrogenase E3 subunit

NC_018520
(Bacillus subtilis QB928)

2e-66

711) Ccan_08480
( YP_004740073.1 )

glycine cleavage system L protein 1

NC_015846
(Capnocytophaga canimorsus Cc5)

2e-66

712) Fleli_3779
( YP_006435883.1 )

dihydrolipoamide dehydrogenase

NC_018018
(Flexibacter litoralis DSM 6794)

2e-66

713) MED152_09985
( YP_007671984.1 )

dihydrolipoamide dehydrogenase

NC_020830
(Polaribacter sp. MED152)

3e-66

714) lpdV
( YP_005561623.1 )

dihydrolipoamide dehydrogenase

NC_017196
(Bacillus subtilis BEST195)

3e-66

715) lpdV
( YP_007427394.1 )

dihydrolipoamide dehydrogenase

NC_020244
(Bacillus subtilis XF-1)

3e-66

716) lpdA-1
( YP_006721720.1 )

dihydrolipoamide dehydrogenase

NC_007517
(Geobacter metallireducens GS-15)

3e-66

717) NMBM01240355_0954
( YP_005901600.1 )

dihydrolipoyl dehydrogenase

NC_017517
(Neisseria meningitidis M01-240355)

4e-66

718) BSn5_02565
( YP_004204174.1 )

dihydrolipoamide dehydrogenase

NC_014976
(Bacillus subtilis BSn5)

4e-66

719) ZPR_4064
( YP_003586564.1 )

dihydrolipoamide dehydrogenase, E3 component of 2-oxoglutarate and pyruvate dehydrogenase complexes

NC_014041
(Zunongwangia profunda SMA-87)

5e-66

720) Sph21_1690
( YP_004316922.1 )

dihydrolipoamide dehydrogenase

NC_015277
(Sphingobacterium sp. 21)

5e-66

721) I653_11540
( YP_007663065.1 )

dihydrolipoamide dehydrogenase

NC_020832
(subtilis subtilis BAB-1)

5e-66

722) Halhy_3353
( YP_004448084.1 )

dihydrolipoamide dehydrogenase

NC_015510
(Haliscomenobacter hydrossis DSM 1100)

6e-66

723) FIC_01592
( YP_003096100.1 )

dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase

NC_013062
(Flavobacteriaceae bacterium 3519-10)

8e-66

724) lpdA
( YP_005036019.1 )

putative dihydrolipoamide dehydrogenase

NC_016620
(Bacteriovorax marinus SJ)

2e-65

725) lpdA3
( YP_975003.1 )

dihydrolipoamide dehydrogenase

NC_008767
(Neisseria meningitidis FAM18)

2e-65

726) R2APBS1_1493
( YP_007589873.1 )

dihydrolipoamide dehydrogenase

NC_020541
(Rhodanobacter sp. 2APBS1)

2e-65

727) Ssed_0433
( YP_001472174.1 )

dihydrolipoamide dehydrogenase

NC_009831
(Shewanella sediminis HAW-EB3)

2e-65

728) Smed_2936
( YP_001328600.1 )

dihydrolipoamide dehydrogenase

NC_009636
(Sinorhizobium medicae WSM419)

2e-65

729) lpdA3
( YP_004048885.1 )

dihydrolipoamide dehydrogenase E3 component

NC_014752
(Neisseria lactamica 020-06)

3e-65

730) NMBG2136_0928
( YP_005893817.1 )

dihydrolipoyl dehydrogenase

NC_017513
(Neisseria meningitidis G2136)

4e-65

731) NMBH4476_1216
( YP_005899869.1 )

dihydrolipoyl dehydrogenase

NC_017516
(Neisseria meningitidis H44/76)

4e-65

732) lpdA1
( NP_273995.1 )

dihydrolipoamide dehydrogenase

NC_003112
(Neisseria meningitidis MC58)

4e-65

733) lpdA3
( YP_002342552.1 )

dihydrolipoamide dehydrogenase

NC_003116
(Neisseria meningitidis Z2491)

4e-65

734) Aeqsu_3053
( YP_006419506.1 )

dihydrolipoamide dehydrogenase

NC_018013
(Aequorivita sublithincola DSM 14238)

5e-65

735) ZPR_2851
( YP_003585367.1 )

dihydrolipoamide dehydrogenase

NC_014041
(Zunongwangia profunda SMA-87)

6e-65

736) TVN0099
( NP_110618.1 )

dihydrolipoamide dehydrogenase

NC_002689
(Thermoplasma volcanium GSS1)

6e-65

737) NMBM01240149_1132
( YP_005895921.1 )

dihydrolipoyl dehydrogenase

NC_017514
(Neisseria meningitidis M01-240149)

7e-65

738) NMBNZ0533_1006
( YP_005903614.1 )

dihydrolipoyl dehydrogenase

NC_017518
(Neisseria meningitidis NZ-05/33)

7e-65

739) pdhD
( YP_004739021.1 )

dihydrolipoyl dehydrogenase, E3 component

NC_015844
(Zobellia galactanivorans DsiJT)

1e-64

740) Oter_4192
( YP_001821065.1 )

dihydrolipoamide dehydrogenase

NC_010571
(Opitutus terrae PB90-1)

1e-64

741) TCCBUS3UF1_20200
( YP_005655132.1 )

Dihydrolipoyl dehydrogenase

NC_017278
(Thermus sp. CCB_US3_UF1)

2e-64

742) M446_2168
( YP_001769064.1 )

dihydrolipoamide dehydrogenase

NC_010511
(Methylobacterium sp. 4-46)

2e-64

743) DMIN_00990
( YP_003543258.1 )

dihydrolipoamide dehydrogenase

NC_014004
(Candidatus Sulcia muelleri DMIN)

2e-64

744) Ta1435
( NP_394889.1 )

dihydrolipoamide dehydrogenase

NC_002578
(Thermoplasma acidophilum DSM 1728)

3e-64

745) Mrad2831_0926
( YP_001753619.1 )

dihydrolipoamide dehydrogenase

NC_010505
(Methylobacterium radiotolerans JCM 2831)

3e-64

746) Rcas_2104
( YP_001432207.1 )

dihydrolipoamide dehydrogenase

NC_009767
(Roseiflexus castenholzii DSM 13941)

4e-64

747) Tgr7_2454
( YP_002514519.1 )

dihydrolipoamide dehydrogenase

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

1e-63

748) Halsa_0788
( YP_003994589.1 )

dihydrolipoamide dehydrogenase

NC_014654
(Halanaerobium hydrogeniformans sapolanicus)

5e-64

749) Fluta_2255
( YP_004345079.1 )

dihydrolipoamide dehydrogenase

NC_015321
(Fluviicola taffensis DSM 16823)

8e-64

750) Acry_1621
( YP_001234746.1 )

dihydrolipoamide dehydrogenase

NC_009484
(Acidiphilium cryptum JF-5)

8e-64

751) lpd
( YP_004283895.1 )

dihydrolipoyl dehydrogenase

NC_015186
(Acidiphilium multivorum AIU301)

8e-64

752) lpda3
( YP_005190471.1 )

dihydrolipoamide dehydrogenase

NC_016812
(Sinorhizobium fredii HH103)

9e-64

753) Halsa_0178
( YP_003994021.1 )

dihydrolipoamide dehydrogenase

NC_014654
(Halanaerobium hydrogeniformans sapolanicus)

1e-63

754) MICA_663
( YP_004864999.1 )

dihydrolipoyl dehydrogenase

NC_016026
(Micavibrio aeruginosavorus ARL-13)

2e-63

755) GbCGDNIH1_2066
( YP_745887.1 )

dihydrolipoamide dehydrogenase

NC_008343
(Granulibacter bethesdensis CGDNIH1)

2e-63

756) lpdA
( YP_001597914.1 )

dihydrolipoamide dehydrogenase

NC_010118
(Candidatus Sulcia muelleri GWSS)

2e-63

757) lpdA1
( YP_002827610.1 )

dihydrolipoamide dehydrogenase

NC_012587
(Sinorhizobium fredii NGR234)

3e-63

758) lpd2
( YP_005952286.1 )

dihydrolipoyl dehydrogenase Lpd

NC_017538
(Oligotropha carboxidovorans OM4)

4e-63

759) lpd2
( YP_004634274.1 )

dihydrolipoyl dehydrogenase Lpd

NC_015684
(Oligotropha carboxidovorans OM5)

4e-63

760) lpdA
( YP_002287594.1 )

dihydrolipoamide dehydrogenase

NC_011386
(Oligotropha carboxidovorans OM5; ATCC 49405)

4e-63

761) Krodi_2977
( YP_004432219.1 )

dihydrolipoamide dehydrogenase

NC_015496
(Krokinobacter sp. 4H-3-7-5)

5e-63

762) Theos_0131
( YP_006971311.1 )

dihydrolipoamide dehydrogenase

NC_019386
(Thermus oshimai JL-2)

5e-63

763) lpdA
( YP_001209984.1 )

dihydrolipoamide dehydrogenase

NC_009446
(Dichelobacter nodosus VCS1703A)

5e-63

764) TM1040_3504
( YP_611738.1 )

dihydrolipoamide dehydrogenase

NC_008043
(Ruegeria sp. TM1040)

6e-63

765) TTHA0233
( YP_143499.1 )

pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component

NC_006461
(Thermus thermophilus HB8)

7e-63

766) lpd
( YP_006561579.1 )

dihydrolipoyl dehydrogenase 2

NC_018286
(Phaeobacter gallaeciensis 2.10)

1e-62

767) Rru_A1215
( YP_426303.1 )

dihydrolipoamide dehydrogenase

NC_007643
(Rhodospirillum rubrum ATCC 11170)

9e-63

768) F11_06290
( YP_006047525.1 )

dihydrolipoamide dehydrogenase

NC_017584
(Rhodospirillum rubrum F11)

9e-63

769) lpdA
( YP_002298459.1 )

dihydrolipoamide dehydrogenase

NC_011420
(Rhodospirillum centenum SW)

2e-62

770) HYPDE_39463
( YP_007916060.1 )

dihydrolipoamide dehydrogenase

NC_021172
(Hyphomicrobium denitrificans 1NES1)

2e-62

771) CA2559_06220
( YP_003716006.1 )

Dihydrolipoyl dehydrogenase

NC_014230
(Croceibacter atlanticus HTCC2559)

3e-62

772) lpd2
( YP_006571808.1 )

dihydrolipoyl dehydrogenase 2

NC_018290
(Phaeobacter gallaeciensis DSM 17395)

3e-62

773) bfmBC
( YP_003425245.1 )

dihydrolipoamide dehydrogenase

NC_013791
(Bacillus pseudofirmus OF4)

6e-62

774) Cpin_7124
( YP_003126726.1 )

dihydrolipoamide dehydrogenase

NC_013132
(Chitinophaga pinensis DSM 2588)

8e-62

775) amb3963
( YP_423326.1 )

pyruvate/2-oxoglutarate dehydrogenase complex

NC_007626
(Magnetospirillum magneticum AMB-1)

1e-61

776) A7A1_3637
( YP_007209053.1 )

dihydrolipoamide dehydrogenase

NC_019896
(Bacillus subtilis BSP1)

2e-61

777) sucC
( YP_001601674.1 )

2-oxoglutarate dehydrogenase E3 component

NC_010125
(Gluconacetobacter diazotrophicus PAl 5)

2e-61

778) Gdia_2120
( YP_002276494.1 )

dihydrolipoamide dehydrogenase

NC_011365
(Gluconacetobacter diazotrophicus PAl 5)

2e-61

779) GLX_19840
( YP_004868766.1 )

dihydrolipoamide dehydrogenase

NC_016027
(Gluconacetobacter xylinus NBRC 3288)

3e-61

780) lpdA1
( YP_005040028.1 )

Dihydrolipoyl dehydrogenase

NC_016622
(Azospirillum lipoferum 4B)

5e-61

781) G432_03945
( YP_007615112.1 )

dihydrolipoamide dehydrogenase

NC_020561
(Sphingomonas sp. MM-1)

8e-61

782) SL003B_4229
( YP_004305952.1 )

dihydrolipoamide dehydrogenase

NC_015259
(Polymorphum gilvum SL003B-26A1)

1e-60

783) Rvan_0653
( YP_004011029.1 )

dihydrolipoamide dehydrogenase

NC_014664
(Rhodomicrobium vannielii ATCC 17100)

1e-60

784) Ornrh_0516
( YP_006426515.1 )

dihydrolipoamide dehydrogenase

NC_018016
(Ornithobacterium rhinotracheale DSM 15997)

3e-60

785) pdhD
( YP_003449684.1 )

dihydrolipoamide dehydrogenase

NC_013854
(Azospirillum sp. B510)

2e-59

786) TtJL18_0102
( YP_006057809.1 )

dihydrolipoamide dehydrogenase

NC_017587
(Thermus thermophilus JL-18)

2e-59

787) Sala_2225
( YP_617267.1 )

dihydrolipoamide dehydrogenase

NC_008048
(Sphingopyxis alaskensis RB2256)

4e-59

788) lpdA2
( YP_004201459.1 )

dihydrolipoyl dehydrogenase

NC_014974
(Thermus scotoductus SA-01)

9e-59

789) Meso_3400
( YP_675936.1 )

dihydrolipoamide dehydrogenase

NC_008254
(Chelativorans sp. BNC1)

1e-58

790) Swit_1296
( YP_001261799.1 )

dihydrolipoamide dehydrogenase

NC_009511
(Sphingomonas wittichii RW1)

1e-58

791) Bresu_3327
( YP_003820256.1 )

dihydrolipoamide dehydrogenase

NC_014375
(Brevundimonas subvibrioides ATCC 15264)

3e-58

792) Theos_2095
( YP_006973188.1 )

dihydrolipoamide dehydrogenase

NC_019386
(Thermus oshimai JL-2)

9e-58

793) lpd
( YP_001534220.1 )

dihydrolipoyl dehydrogenase

NC_009952
(Dinoroseobacter shibae DFL 12)

3e-57

794) TMO_3004
( YP_006372426.1 )

dihydrolipoamide dehydrogenase

NC_017956
(Tistrella mobilis KA081020-065)

7e-57

795) Mesau_01067
( YP_007302922.1 )

dihydrolipoamide dehydrogenase

NC_019973
(Mesorhizobium australicum WSM2073)

7e-57

796) pdhD
( YP_001938238.1 )

dihydrolipoamide dehydrogenase precursor

NC_010793
(Orientia tsutsugamushi Ikeda)

7e-57

797) lpdA
( YP_005030590.1 )

dihydrolipoyl dehydrogenase

NC_016617
(Azospirillum brasilense Sp245)

1e-56

798) Mesop_1035
( YP_004609615.1 )

dihydrolipoamide dehydrogenase

NC_015675
(Mesorhizobium opportunistum WSM2075)

2e-56

799) Mlg_0271
( YP_741116.1 )

dihydrolipoamide dehydrogenase

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

1e-55

800) sucC
( YP_008393032.1 )

dihydrolipoamide dehydrogenase

NC_021991
(Acetobacter pasteurianus 386B)

2e-55

801) APA01_07680
( YP_003187296.1 )

dihydrolipoamide dehydrogenase

NC_013209
(Acetobacter pasteurianus IFO 3283)

2e-55

802) APA03_07680
( YP_005477362.1 )

dihydrolipoamide dehydrogenase

NC_017100
(Acetobacter pasteurianus IFO 3283)

2e-55

803) APA12_07680
( YP_005480528.1 )

dihydrolipoamide dehydrogenase

NC_017108
(Acetobacter pasteurianus IFO 3283)

2e-55

804) APA32_07680
( YP_005483218.1 )

dihydrolipoamide dehydrogenase

NC_017111
(Acetobacter pasteurianus IFO 3283)

2e-55

805) APA07_07680
( YP_005486503.1 )

dihydrolipoamide dehydrogenase

NC_017121
(Acetobacter pasteurianus IFO 3283)

2e-55

806) APA22_07680
( YP_005489308.1 )

dihydrolipoamide dehydrogenase

NC_017125
(Acetobacter pasteurianus IFO 3283)

2e-55

807) APA26_07680
( YP_005498410.1 )

dihydrolipoamide dehydrogenase

NC_017146
(Acetobacter pasteurianus IFO 3283)

2e-55

808) APA42C_07680
( YP_005501276.1 )

dihydrolipoamide dehydrogenase

NC_017150
(Acetobacter pasteurianus IFO 3283)

2e-55

809) Saro_1178
( YP_496457.1 )

dihydrolipoamide dehydrogenase

NC_007794
(Novosphingobium aromaticivorans DSM 12444)

6e-55

810) lpdA
( YP_001248100.1 )

dihydrolipoamide dehydrogenase

NC_009488
(Orientia tsutsugamushi Boryong)

8e-54

811) Mrub_1532
( YP_003507314.1 )

dihydrolipoamide dehydrogenase

NC_013946
(Meiothermus ruber DSM 1279)

4e-53

812) K649_14900
( YP_007881763.1 )

dihydrolipoamide dehydrogenase

NC_021081
(Meiothermus ruber DSM 1279)

4e-53

813) lpdA
( YP_005037273.1 )

dihydrolipoyl dehydrogenase

NC_016621
(Blattabacterium sp. Cpu)

7e-51

814) Mesil_1945
( YP_003685328.1 )

dihydrolipoamide dehydrogenase

NC_014212
(Meiothermus silvanus DSM 9946)

1e-48

• Sequence Alignments

1) SE0077 in NC_004461


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  818 bits (3095),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 504/504 (100%), Positives = 504/504 (100%), Gaps = 0/504 (0%)

Query  1    MKIRKRLDTYYTTIFLSTNSNYSYLSKEESRMTGEVKKYVDLLVIGAGSGGYVAAIRAAQ  60
            MKIRKRLDTYYTTIFLSTNSNYSYLSKEESRMTGEVKKYVDLLVIGAGSGGYVAAIRAAQ
Sbjct  1    MKIRKRLDTYYTTIFLSTNSNYSYLSKEESRMTGEVKKYVDLLVIGAGSGGYVAAIRAAQ  60

Query  61   LGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVDMPEVV  120
            LGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVDMPEVV
Sbjct  61   LGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVDMPEVV  120

Query  121  KWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGS  180
            KWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGS
Sbjct  121  KWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGS  180

Query  181  LPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGS  240
            LPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGS
Sbjct  181  LPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGS  240

Query  241  DTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYC  300
            DTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYC
Sbjct  241  DTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYC  300

Query  301  LVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYE  360
            LVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYE
Sbjct  301  LVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYE  360

Query  361  AKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARA  420
            AKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARA
Sbjct  361  AKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARA  420

Query  421  LSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPT  480
            LSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPT
Sbjct  421  LSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPT  480

Query  481  LPEPLMEAAEGVMGHATHMLNKKQ  504
            LPEPLMEAAEGVMGHATHMLNKKQ
Sbjct  481  LPEPLMEAAEGVMGHATHMLNKKQ  504

2) Bcell_3086 in NC_014829


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  684 bits (2586),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/472 (88%), Positives = 454/472 (97%), Gaps = 0/472 (0%)

Query  1    MTVEGKREVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  60
            MT E K+ VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  61   SERVKHIKHANTMGIKVSGEVDVEMPEVVKWKDGIVNKLTNGVQTLLKGNSVEVISGEAY  120
            SERVKHIKHANTMG+KVSGEV+V+MPEVVKWKDGIVNKLT+G++TLLKGN+VEVISGEAY
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  121  LTEPYVAKIKIGNEEQLFSYKDLILAIGSVPTELKSMPIDRKRIISSTEALTLQEVPKHL  180
            LTE+ +AKIKI +EEQ+FSYKDLILAIGS+P ELKSMP+D+KRIISSTEAL LQEVP+HL
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  181  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILPGTDPMLTSVVKRHLKEYGITVKTNAL  240
            VVVGGGYIGLELGTAYAKFGAKVTILEGSDTIL+GTDP+LT  VKRHLKE GITV T+AL
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  241  VQGGENTGDEVNIEVQVNGKEEIVKGDYCLVSIGRKPNTGKIGLENIGVELDQHGFIKIN  300
            VQGGENTGDEVN++VQV+GKEEI++ DYCLVSIGRKPNTGKIGLENIGV LD++GFIKIN
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  301  DKCQTNVEHVYAIGDCAGGYLLAHKASYEGKIAAEVISGLKSVIDFQAMPFVIFSDPEVA  360
            +KCQTN+EHVYAIGDCAGG LLAHKASYE+KIAAEVISG +SVIDFQAMPFVIFSDPEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  361  YTGLTEKEAKEKGYETVSSRFPFQANGRALSVSDGDGFVKVVADKKSNRVLGVQMVGPDV  420
            YTGLTEKEAKEKGYETVSSRFPFQAN+RALSVSD+DGFV+VVA+K+++RVLGVQMVGP+V
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  421  SSLIAEAVFAIECGATAEDLSLTIHAHPTLPEPLMEAAEGVMGRAIHMLNKK  472
            SSLIAEAVFAIE GA AEDLSLTIHAHPTLPEPLMEAAEGVMG+A HMLNKK
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKK  503

3) BpOF4_20079 in NC_013792


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  683 bits (2581),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/471 (88%), Positives = 451/471 (96%), Gaps = 0/471 (0%)

Query  1    MTVEGKREVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  60
            MT E K+ VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  61   SERVKHIKHANTIGIKVSGEVNVEMPEVVKWKDGIVNKLTNGVQTLLKGNGVEVISGEAY  120
            SERVKHIKHANT+G+KVSGEV+V+MPEVVKWKDGIVNKLT+G++TLLKGNGVEVISGEAY
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  121  LTEPFVVKINIGNQEQVFSYKDLILAIGSLPTELKSMPFDRKRIISSTEALTLQEVPKHL  180
            LTE+ + KI+I ++EQ+FSYKDLILAIGSLP ELKSMPFD+KRIISSTEAL LQEVP+HL
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  181  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTIIPGTDPMLTSVVKRHLKEHGITVKTNAL  240
            VVVGGGYIGLELGTAYAKFGAKVTILEGSDTI++GTDP+LT  VKRHLKE GITV T+AL
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  241  VQGGENTGDEVNIEVQINGKEEIIKGDYCLVSIGRKPNTGKMGLENIGVELDRHGFIKIN  300
            VQGGENTGDEVN++VQ++GKEEII+ DYCLVSIGRKPNTGK+GLENIGV LD +GFIKIN
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  301  DKCQTNVEHVYAIGDCAGGYLLAHKASYEGKIAAEVISGLKSVIDFQAMPFVIFSDPEVA  360
            +KCQTN+EHVYAIGDCAGG LLAHKASYE+KIAAEVISG +SVIDFQAMPFVIFSDPEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  361  YTGLTEKEAKEKGYETVSSRFPFQANGRALSVSDGDGFVKVVADKKSNRVLGVQMVGPDV  420
            YTGLTEKEAKEKGYETVSSRFPFQAN+RALSVSD+DGFV+VVA+K+++RVLGVQMVGP+V
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  421  SSLIAEAVFAIECGATAEDLSLTIHAHPTLPEPLMEAAEGVMGHAIHMLNK  471
            SSLIAEAVFAIE GA AEDLSLTIHAHPTLPEPLMEAAEGVMGHA HMLNK
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

4) Bcell_2665 in NC_014829


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  417 bits (1570),  Expect = 7e-118, Method: Compositional matrix adjust.
 Identities = 239/462 (52%), Positives = 360/462 (78%), Gaps = 2/462 (0%)

Query  10   VDTLVIGSGPGGYVAAIRAAQLGQKVTIVERENLGGVCLNVGCIPSKALIEAGHRYHRAN  69
            VD LVIG+G+GGYVAAIRAAQLG+KV +V++ +LGGVCLN GCIPSKALI A++R  + +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   NSEDMGISV-GDVKLDFSKVQKWKASVVDKLTGGVEGLLKGNKVDIVRGEAYFVDDTTVR  128
            +++ MG+ V G+V++D + V KWK ++V+KLT+G+  LLKGN V+++ GEAY+ +    +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  IMDEKSSQTYKFNNAIVATGSRPIELPKFKFSEK-VVSSTGALALKEVPKKLVVIGGGYI  187
            I  E   Q + +++ I+A GS P+EL    F +K ++SST AL L+EVP+ LVV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GVELGSAYADLGSEVTILEGTKSILPGFEKQMSQLVAKRLKNNGVTIKTEAFAQEMEETA  247
            G+ELG+AYA +G+ VTILEG+ +IL+G +  +++ V ++LK+ G+T+ T+A+ Q  E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  DGVKVTAEVKGKVEEFEGNILLVTVGRRPNTEELGLEQAGVEIDDRGIVKVDEQCRTSVK  307
            D V+V  +V GK E ++ +  LV++GR+PNT  +GLE+ GV +DD+G++K++++C+T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  308  NIFAIGDIAPGPQLAHKASYEAKVAAEAIAGHPSVIDYTAIPAVVFSGPELATVGLTEKE  367
            +++AIGD A G  LAHKASYEAK+AAE I+G+ SVID+ A+P V+FS+PE+A  GLTEKE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  368  AKDEGYDVVVAKFPFAANGRALSLNETDGFMKMVTRKEDGLVLGVQIAGANASDMISEAC  427
            AK+ GY+ V ++FPF AN+RALS++++DGF+++V+ K+   VLGVQ+ G++ S +I+EA 
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  428  VAIEAGMTAEDLALTIHAHPSLGEITMETAEVALGMPIHIVK  469
             AIEAG  AEDL+LTIHAHP+L E  ME+AE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

5) PM3016_5959 in NC_016935


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  413 bits (1554),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 253/464 (55%), Positives = 362/464 (79%), Gaps = 3/464 (0%)

Query  10   IDVLVIGAGPGGYVAAIRAAQLGKSVLVVDKAELGGVCLNRGCIPSKALISAAHQYEVAK  69
            +D+LVIGAG+GGYVAAIRAAQLGK V++VDKAELGGVCLNRGCIPSKALISA+++    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HGSSIGIT-ADNVAVDFAKVQEWKNGIVKKQTGGVGMLLKGNKIQVFNGEALFINEHEAR  128
            H++++G+  +++V VD + V  WK+GIV+K T+G+  LLKGN ++V++GEA + + H A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNDNETARYKFNYCIIATGSRPIELKTFPFGG-RILSSTEALQLSEIPKSMVVIGGGYI  187
            +  ++E   + ++  I+A GS P+ELK+ PF+  RI+SSTEALQL E+P+ +VV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GIELGQTFAKFGTKVTVLEGSDHILPGFEKDLSSLVARNLKKLEVEVVTEAMAQGSEQSG  247
            G+ELG ++AKFG+KVT+LEGSD IL+G +  L+  V R+LK + + V+T+A+ QG+E++G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  DSVTVTYTVKGEEKKVTADYVLVTVGRRPNTDGDLSLELAGVEIGERGLIKVNEKGQTNV  307
            D V V   V G E  +  DY LV++GR+PNT G ++LE  GV ++++G+IK+N+K QTN+
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIYAIGDIVPGPALAHKASYEAKVAAESIAGLPSVVDYKVIPAVVFSDPEIAGVGLSES  367
             H+YAIGD   G  LAHKASYEAK+AAE I+G  SV+D++ +P V+FSDPE+A  GL+E 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKAKGINTVVGKFPYGANGRAQSMNATDGFVKLIADKDTGVLVGGFVVGAEASNLIAEL  427
            EAK KG +TV ++FP+ AN+RA S++ +DGFV+++A+K+T  ++G  +VG+E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLGIEMGATLEDIALTIHAHPTLGEITMDAAEGALGHPIHQLGK  471
             ++IE GA  ED++LTIHAHPTL E  M+AAEG +GH+ H L K
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

6) B2K_30290 in NC_017672


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  413 bits (1554),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 253/464 (55%), Positives = 362/464 (79%), Gaps = 3/464 (0%)

Query  10   IDVLVIGAGPGGYVAAIRAAQLGKSVLVVDKAELGGVCLNRGCIPSKALISAAHQYEVAK  69
            +D+LVIGAG+GGYVAAIRAAQLGK V++VDKAELGGVCLNRGCIPSKALISA+++    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HSSSIGIT-ADNVAVDFAKVQEWKNGIVKKQTGGVGMLLKGNKIQVFNGEALFINEHEAR  128
            H++++G+  +++V VD + V  WK+GIV+K T+G+  LLKGN ++V++GEA + + H A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNDNETARYKFNYCIIATGSRPIELKTFPFGG-RILSSTEALQLSEIPKSMVVIGGGYI  187
            +  ++E   + ++  I+A GS P+ELK+ PF+  RI+SSTEALQL E+P+ +VV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GIELGQTFAKFGTKVTVLEGSDHILPGFEKDLSSLVARNLKKLEVEVVTEAMAQGSEQSG  247
            G+ELG ++AKFG+KVT+LEGSD IL+G +  L+  V R+LK + + V+T+A+ QG+E++G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  DSVTVTYTVKGEEKKVTADYVLVTVGRRPNTDGDLSLELAGVEIGERGLIKVNEKGQTNV  307
            D V V   V G E  +  DY LV++GR+PNT G ++LE  GV ++++G+IK+N+K QTN+
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIYAIGDIVPGPALAHKASYEAKVAAESIAGLPSVVDYKVIPAVVFSDPEIAGVGLSES  367
             H+YAIGD   G  LAHKASYEAK+AAE I+G  SV+D++ +P V+FSDPE+A  GL+E 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKAKGINTVVGKFPYGANGRAQSMNATDGFVKLIADKDTGVLVGGFVVGAEASNLIAEL  427
            EAK KG +TV ++FP+ AN+RA S++ +DGFV+++A+K+T  ++G  +VG+E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLGIEMGATLEDIALTIHAHPTLGEITMDAAEGALGHPIHQLGK  471
             ++IE GA  ED++LTIHAHPTL E  M+AAEG +GH+ H L K
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

7) pdhD in NC_015690


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  413 bits (1554),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 253/464 (55%), Positives = 362/464 (79%), Gaps = 3/464 (0%)

Query  10   IDVLVIGAGPGGYVAAIRAAQLGKSVLVVDKAELGGVCLNRGCIPSKALISAAHQYEVAK  69
            +D+LVIGAG+GGYVAAIRAAQLGK V++VDKAELGGVCLNRGCIPSKALISA+++    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HGSSIGIT-ADNVAVDFAKVQEWKNGIVKKQTGGVGMLLKGNKIQVFNGEALFINEHEAR  128
            H++++G+  +++V VD + V  WK+GIV+K T+G+  LLKGN ++V++GEA + + H A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNDNETARYKFNYCIIATGSRPIELKTFPFGG-RILSSTEALQLSEIPKSMVVIGGGYI  187
            +  ++E   + ++  I+A GS P+ELK+ PF+  RI+SSTEALQL E+P+ +VV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GIELGQTFAKFGTKVTVLEGSDHILPGFEKDLSSLVARNLKKLEVEVVTEAMAQGSEQSG  247
            G+ELG ++AKFG+KVT+LEGSD IL+G +  L+  V R+LK + + V+T+A+ QG+E++G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  DSVTVTYTVKGEEKKVTADYVLVTVGRRPNTDGDLSLELAGVEIGERGLIKVNEKGQTNV  307
            D V V   V G E  +  DY LV++GR+PNT G ++LE  GV ++++G+IK+N+K QTN+
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIYAIGDIVPGPALAHKASYEAKVAAESIAGLPSVVDYKVIPAVVFSDPEIAGVGLSES  367
             H+YAIGD   G  LAHKASYEAK+AAE I+G  SV+D++ +P V+FSDPE+A  GL+E 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKAKGINTVVGKFPYGANGRAQSMNATDGFVKLIADKDTGVLVGGFVVGAEASNLIAEL  427
            EAK KG +TV ++FP+ AN+RA S++ +DGFV+++A+K+T  ++G  +VG+E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLGIEMGATLEDIALTIHAHPTLGEITMDAAEGALGHPIHQLGK  471
             ++IE GA  ED++LTIHAHPTL E  M+AAEG +GH+ H L K
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

8) HBHAL_2811 in NC_017668


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  412 bits (1552),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 242/460 (53%), Positives = 352/460 (77%), Gaps = 2/460 (0%)

Query  10   LDTLVIGAGPGGYVAAIRAAQTGQNVTIVDKGNLGGVCLNVGCVPSKALIQAGHRYEHAK  69
            +D LVIGAG+GGYVAAIRAAQ G++V +VDK++LGGVCLN GC+PSKALI A++R  H K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   GAEDMGIQ-SENTTVDFSKVQEWKSGVVQKLTGGVEGLLKNNKVDIVKGEVYFVDKNTVR  128
             A+ MG++ S +  VD + V  WK G+V+KLT+G+  LLK N V+++ GE Y+ + +  +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  IMDDKNSQTYTFNNCIIATGSRPIELPNFKFSE-RVIDSTGALALNEVPKKMVVIGGGYI  187
            I  + + Q +++++ I+A GS P+EL +  F + R+I ST AL L+EVP+ +VV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GTELGTAYANFDTEVTILEGMKDILGGFEKQMSSLVKKRLKKKGVDIVTNAMAQGVEETE  247
            G ELGTAYA+F++ VTILEG   IL+G +  ++  VK++LK  G+ ++T+A+ QG E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  DGVKVTYEVKGEEKTIEADYVLVTVGRRPNTDEIGLEELGVEMSDKGVIQIDKQCRTNFD  307
            D V+V  +V G E  I+ DY LV++GR+PNT+ IGLE++GV + D+G I+I+++C+TN++
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  308  NIYAIGDIVDGPPLAHKASYEGKIAAEVIAGEKSEIDYLGIPAVVFSDPELASVGYTEDE  367
            ++YAIGD  +G  LAHKASYE+KIAAEVI+G++S ID+ ++P V+FSDPE+A  G TE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  368  AKEAGYDVKASKFPFGANGRALSLNDSDGFLKLITRKDDNLVIGAQIAGPNASDMISELG  427
            AKE GY+  +S+FPF AN+RALS++D+DGF+++++ K+ + V+G Q+ GP+ S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  428  LAIEAGMTAEDLALTIHAHPTLGEITMEAAEVAMGSPIHI  467
            +AIEAG  AEDL+LTIHAHPTL E  MEAAE  MG + H+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

9) pdhD in NC_012491


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  407 bits (1530),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 243/470 (52%), Positives = 363/470 (78%), Gaps = 2/470 (0%)

Query  2    VVGEFTTEVDVLVIGAGPGGYVAAIRAAQLGKTVAVVEKAELGGVCLNVGCIPSKAMIHA  61
            + GE    VD+LVIGAG+GGYVAAIRAAQLGK V +V+KAELGGVCLN GCIPSKA+I A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   AHTYEHTQHTESMGITME-NVKVDFAKVQEWKSGIVKQLTGGVGSLFKGHKIQVIPGEAL  120
            ++   H +H+++MG+ +  +V+VD + V  WK GIV++LT+G+ +L+KG+ ++VI+GEA 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  121  FVSENEVRVFHGYDVNRYRFQHCIIATGSRPIELPAFPFG-KRVMSSTEALSMTELPKSL  179
            +   +  ++    + + + +++ I+A GS P+EL + PF+ KR++SSTEAL + E+P+ L
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  180  VVIGGGYIGIELGTVFAKFGTKVTILEGSDQILPGFEPDMPRLVERKLKKLDVTIHTKAL  239
            VV+GGGYIG+ELGT +AKFG+KVTILEGSD IL+G +P + + V R LK +++T+ T AL
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  240  AQGMEETENGVIVTAEVKGEQQKIEAEYVLVTVGRRPNTDELGIRDIGMNMTDRGLIVVD  299
             QG E+T + V V  +V G ++ I+ +Y LV++GR+PNT+ +G+ +IG+ + D+G+I ++
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  300  KQGRTSIPNVYAIGDIVAGPALAHKASYEGKVAAEAIAGHPAEVDYKAIPAVVFCDPEIA  359
            ++ +T+I +VYAIGD  +G  LAHKASYE+K+AAE I+G+ + +D++A+P V+F DPE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  360  SVGINEKEAKEKGIDYIVGRFPFAANGRALSVNAGEGYVKLIAEKETNLVLGAQIVGPEA  419
              G+ EKEAKEKG + + +RFPF AN+RALSV+ ++G+V+++AEK+T+ VLG Q+VGPE 
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  420  SNIIAEIGLAIEMGATLEDIELTIHAHPTLGEVTMEAAELALGRPIHVMK  469
            S++IAE  +AIE GA  ED+ LTIHAHPTL E  MEAAE  +G++ H+++
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

10) GC56T3_2512 in NC_014206


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  406 bits (1526),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 231/447 (52%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSDEMGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKASIVKKLTGGVEGLLKGNKVDIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK +IV+KLT+G+  LLKGN V+++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSRPIELPNFKFSG-RILDSTGALNLGEIPKSLVVIGGGYIGIELGTAYANFGAKVT  203
            LA GS P+EL +  F   RI+ ST AL+L E+P+ LVV+GGGYIG+ELGTAYA+FGAKVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMVSIIKRRLKNKGVEVVTNALAKGAEERADGVTVTYEANGETKTI  263
            ILEG++ ILSG +  +   +KR+LK+ G+ V+T+AL +G+E+ +D V V  + +G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE+IG+ + ++G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYIAIPAVVFSDPECASVGYFEQQAKEEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AKE G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFLKLVVRKEDGVVIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q++GP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIIAK  470
            HAHPTL E  MEAAE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

11) pdhD in NC_020210


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  406 bits (1526),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 231/447 (52%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSDEMGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKASIVKKLTGGVEGLLKGNKVDIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK +IV+KLT+G+  LLKGN V+++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSRPIELPNFKFSG-RILDSTGALNLGEIPKSLVVIGGGYIGIELGTAYANFGAKVT  203
            LA GS P+EL +  F   RI+ ST AL+L E+P+ LVV+GGGYIG+ELGTAYA+FGAKVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMVSIIKRRLKNKGVEVVTNALAKGAEERADGVTVTYEANGETKTI  263
            ILEG++ ILSG +  +   +KR+LK+ G+ V+T+AL +G+E+ +D V V  + +G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE+IG+ + ++G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYIAIPAVVFSDPECASVGYFEQQAKEEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AKE G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFLKLVVRKEDGVVIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q++GP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIIAK  470
            HAHPTL E  MEAAE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

12) GYMC52_0961 in NC_014915


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  406 bits (1526),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 231/447 (52%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSDEMGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKASIVKKLTGGVEGLLKGNKVDIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK +IV+KLT+G+  LLKGN V+++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSRPIELPNFKFSG-RILDSTGALNLGEIPKSLVVIGGGYIGIELGTAYANFGAKVT  203
            LA GS P+EL +  F   RI+ ST AL+L E+P+ LVV+GGGYIG+ELGTAYA+FGAKVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMVSIIKRRLKNKGVEVVTNALAKGAEERADGVTVTYEANGETKTI  263
            ILEG++ ILSG +  +   +KR+LK+ G+ V+T+AL +G+E+ +D V V  + +G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE+IG+ + ++G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYIAIPAVVFSDPECASVGYFEQQAKEEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AKE G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFLKLVVRKEDGVVIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q++GP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIIAK  470
            HAHPTL E  MEAAE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

13) GYMC61_1835 in NC_013411


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  406 bits (1526),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 231/447 (52%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSDEMGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKASIVKKLTGGVEGLLKGNKVDIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK +IV+KLT+G+  LLKGN V+++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSRPIELPNFKFSG-RILDSTGALNLGEIPKSLVVIGGGYIGIELGTAYANFGAKVT  203
            LA GS P+EL +  F   RI+ ST AL+L E+P+ LVV+GGGYIG+ELGTAYA+FGAKVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMVSIIKRRLKNKGVEVVTNALAKGAEERADGVTVTYEANGETKTI  263
            ILEG++ ILSG +  +   +KR+LK+ G+ V+T+AL +G+E+ +D V V  + +G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE+IG+ + ++G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYIAIPAVVFSDPECASVGYFEQQAKEEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AKE G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFLKLVVRKEDGVVIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q++GP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIIAK  470
            HAHPTL E  MEAAE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

14) GK1061 in NC_006510


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  405 bits (1525),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 231/447 (52%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKASIVKKLTGGVEGLLKGNKVDIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK +IV+KLT+G+  LLKGN V+++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSRPIELPNFKFSG-RILDSTGALNLGEIPKSLVVIGGGYIGIELGTAYANFGAKVT  203
            LA GS P+EL +  F   RI+ ST AL+L E+P+ LVV+GGGYIG+ELGTAYA+FGAKVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMVSIIKRRLKNKGVEVVTNALAKGAEERADGVTVTYEANGETKTI  263
            ILEG++ ILSG +  +   +KR+LK+ G+ V+T+AL +G+E+ +D V V  + +G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE+IG+ + ++G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYIAIPAVVFSDPECASVGYFEQQAKEEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AKE G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFLKLVVRKEDGVVIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q++GP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIIAK  470
            HAHPTL E  MEAAE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

15) GTCCBUS3UF5_12380 in NC_016593


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  405 bits (1525),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 231/447 (52%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKASIVKKLTGGVEGLLKGNKVDIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK +IV+KLT+G+  LLKGN V+++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSRPIELPNFKFSG-RILDSTGALNLGEIPKSLVVIGGGYIGIELGTAYANFGAKVT  203
            LA GS P+EL +  F   RI+ ST AL+L E+P+ LVV+GGGYIG+ELGTAYA+FGAKVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMVSIIKRRLKNKGVEVVTNALAKGAEERADGVTVTYEANGETKTI  263
            ILEG++ ILSG +  +   +KR+LK+ G+ V+T+AL +G+E+ +D V V  + +G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE+IG+ + ++G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYIAIPAVVFSDPECASVGYFEQQAKEEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AKE G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFLKLVVRKEDGVVIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q++GP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIIAK  470
            HAHPTL E  MEAAE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

16) KSO_012135 in NC_020272


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  405 bits (1522),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 231/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVNGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V++GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

17) pdhD in NC_016784


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  405 bits (1522),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 231/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVNGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V++GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

18) pdhD in NC_009725


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  404 bits (1521),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+VI GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

19) B938_07525 in NC_019842


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  404 bits (1521),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+VI GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

20) pdhD in NC_022075


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  404 bits (1521),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+VI GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

21) pdhD in NC_022081


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  404 bits (1521),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+VI GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

22) pdhD in NC_017061


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  404 bits (1521),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+VI GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

23) pdhD in NC_017912


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  404 bits (1521),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+VI GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

24) pdhD in NC_020410


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  403 bits (1518),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 231/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELIILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTGAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE ISG+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

25) M493_05385 in NC_022080


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  403 bits (1518),  Expect = 9e-114, Method: Compositional matrix adjust.
 Identities = 227/447 (51%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK ++V+KLT+G+  LLKGN VE++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSRPIELPSFKFSD-RILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVT  203
            +A GS P+EL S  F + RI+ ST AL+L EVP+ LVV+GGGYIG+ELGTAYA+FG+KVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMAAIIKRRLKKKGVDIVTNALAKGAEERADGVTVTYEANGETKTV  263
            ILEG++ ILSG +  ++  +KR+LK  G+ ++T+AL +G+E+ +D V V  + +G    +
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQVGIKMTDRGLIEVDEQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE++G+ + D+G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AK+ G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALALNDTDGFLKLVVRKEDGVVIGAQIIGPSASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RAL+++D+DGF+++V  K+   V+G Q++GP  S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIITK  470
            HAHPTL E  MEAAE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

26) GTNG_0925 in NC_009328


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  402 bits (1514),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 225/447 (51%), Positives = 342/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKANLGGVCLNVGCIPSKALISAGHRYEQAKHSEEMGIK-AENVTVD  84
            IRAAQLG+KV +V+KA+LGGVCLN GCIPSKALISA++R  + KH++ MG+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V  WK ++V+KLT+G+  LLKGN VE++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSRPIELPNFKFS-NRILDSTGALNLGEIPKSLVVIGGGYIGIELGTAYANFGAKVT  203
            +A GS P+EL +  F  +RI+ ST AL+L E+P+ LVV+GGGYIG+ELGTAYA+FGAKVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGAGEILSGFEKQMAAIIKRRLKKKGVDIVTNALAKGAEEREDGVTVTYEANGETKTV  263
            ILEG++ ILSG +  ++  +KR+LK  G+ ++T+AL +G+E+  D V V  + +G    +
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQVGIKMTDRGLIEVDQQCRTSVPNIFAIGDIVPGPALAH  323
            + DY LV++GR+PNT+ +GLE++G+ + D+G+I ++++C+T++ +++AIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKVAAEAIAGHPSVVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVITAKFPFA  383
            KASYE+K+AAE I+G+ SV+D+ A+P V+FSDPE A  G  E++AK+ G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALALNDTDGFLKLVVRKEDGVVIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RAL+++D+DGF+++V  K+   V+G Q++GP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEGAEVALGTPIHIITK  470
            HAHPTL E  ME+AE  +G + H++ K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

27) Geoth_2860 in NC_015660


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  400 bits (1504),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 238/447 (54%), Positives = 340/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYVEAKHSEDIGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ +G+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQQWKASVVKKLTSGVEGLLKGNKVEIVRGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V +WK ++V+KLT G+  LLKGN VE++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSRPIELPGFKFS-NRVLDSTGALSLQEVPKSLVVIGGGYIGTELGTAYANFGTKVT  203
            +A GS P+EL +  F  +R++ ST AL LQEVP+ LVV+GGGYIG ELGTAYA+FG+KVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  IIEGADEILSGFEKQMTAIVKRRLKKKGVEIFTNALAKGVEEREDGVTVTFEVKGETKTI  263
            I+EG+D ILSG +  +T  VKR+LK  G+ ++T+AL +G E+  D V V  +V G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKLTDRGLIEIDKQCRTSVPNIYAIGDVVQGPPLAH  323
            + DY LV++GR+PNT+ +GLE+IG+ L D+G+I I+++C+T++ ++YAIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKIAAEAIAGKPSEIDYLALPAVVFSDPECASVGYFEQQAKDEGIEVVTAKFPFA  383
            KASYE+KIAAE I+G+ S ID+ A+P V+FSDPE A  G  E++AK+ G E V+++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFMKLVVRKEDGVVIGAQIVGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q+VGP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIISK  470
            HAHPTL E  MEAAE  +G + H+++K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

28) GWCH70_0955 in NC_012793


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  400 bits (1503),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 237/447 (54%), Positives = 340/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYVEAKHSEDIGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ +G+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQQWKASVVKKLTSGVEGLLKGNKVEIVRGEAYFVDANTVRVINGDSAQTYTFKNAI  144
             + V +WK ++V+KLT G+  LLKGN VE++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSRPIELPGFKFS-NRVLDSTGALSLQEVPKSLVVIGGGYIGTELGTAYANFGTKVT  203
            +A GS P+EL +  F  +R++ ST AL LQEVP+ LVV+GGGYIG ELGTAYA+FG+KVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  IIEGADEILSGFEKQMTAIVKRRLKKKGVEIFTNALAKGVEEREDGVTVTFEVKGETKTI  263
            I+EG+D ILSG +  +T  VKR+LK  G+ ++T+AL +G E+  D V V  +V G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKLTDRGLIEIDKQCRTSVPNIYAIGDIVQGPPLAH  323
            + DY LV++GR+PNT+ +GLE+IG+ L D+G+I I+++C+T++ ++YAIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKIAAEAIAGKPSEIDYLAIPAVVFSEPECASVGYFEQQAKDEGIEVVTAKFPFA  383
            KASYE+KIAAE I+G+ S ID+ A+P V+FS+PE A  G  E++AK+ G E V+++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFMKLVVRKEDGVVIGAQIVGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q+VGP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIISK  470
            HAHPTL E  MEAAE  +G + H+++K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

29) GY4MC1_2838 in NC_014650


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  400 bits (1504),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 238/447 (54%), Positives = 340/447 (77%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYVEAKHSEDIGIK-AENVTVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISAS+R  + KH++ +G+K + +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQQWKASVVKKLTSGVEGLLKGNKVEIVRGEAYFVDANTVRVVNGDSAQTYTFKNAI  144
             + V +WK ++V+KLT G+  LLKGN VE++ GEAY+ +A+  ++   D  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSRPIELPGFKFS-NRVLDSTGALSLQEVPKSLVVIGGGYIGTELGTAYANFGTKVT  203
            +A GS P+EL +  F  +R++ ST AL LQEVP+ LVV+GGGYIG ELGTAYA+FG+KVT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  IIEGADEILSGFEKQMTAIVKRRLKKKGVEIFTNALAKGVEEREDGVTVTFEVKGETKTI  263
            I+EG+D ILSG +  +T  VKR+LK  G+ ++T+AL +G E+  D V V  +V G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DADYVLVTVGRRPNTDELGLEQIGIKLTDRGLIEIDKQCRTSVPNIYAIGDVVQGPPLAH  323
            + DY LV++GR+PNT+ +GLE+IG+ L D+G+I I+++C+T++ ++YAIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKIAAEAIAGKPSEIDYLALPAVVFSDPECASVGYFEQQAKDEGIEVVTAKFPFA  383
            KASYE+KIAAE I+G+ S ID+ A+P V+FSDPE A  G  E++AK+ G E V+++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNDTDGFMKLVVRKEDGVVIGAQIVGPNASDMIAELGLAIEAGMTAEDIALTI  443
            AN+RALS++D+DGF+++V  K+   V+G Q+VGP+ S +IAE  +AIEAG  AED++LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEIAMEAAEVALGTPIHIISK  470
            HAHPTL E  MEAAE  +G + H+++K
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

30) pdhD in NC_009848


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  400 bits (1503),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 236/462 (52%), Positives = 350/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGTLGGVCLNVGCIPSKALINAGHRFENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K+ LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEDMGIK-AENVTVDFTKVQEWKASVVNKLTGGVQGLLKGNKVDIVKGEAYFVDSNSVRV  129
            ++ MG+K + +V VD   V  WK ++VNKLT+G++ LLKGN V+++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAILATGSRPIELPTFKYTD-RVINSTGALALKEVPKKLVVIGGGYIG  188
              E+  Q +++K+ ILA GS P+EL +  + + R+I+ST AL L+EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTEVVILEGGDEILPGFEKQMSSLVKRNLKKKGNVEIHTNALAKGVEEKS  248
             ELGTAYA+FG+ V ILEG+D IL+G +  ++  VKR+LK  G + + T+AL +G E+ +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLVTVGRRPNTDELGLEQVGVELTDRGVVKTDKQCRTSVS  308
            D V V  +V G E  ++ DY LV++GR+PNT+ +GLE++GV L D+G +K +++C+T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIVDGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELATVGYTEAE  368
            ++YAIGD  +G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIDIVAAKFPFAANGRALSLDATDGFMKMITRKEDGLVIGAQIAGVGASDMISELS  428
            AKE G + V+++FPF AN+RALS+  +DGF+++++ K+   V+G Q+ G   S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGVTAEDIAMTIHAHPTLGEITMETAEVAIGSPIHIVK  470
            +AIEAG  AED+++TIHAHPTL E  ME+AE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

31) pdhD in NC_017542


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  398 bits (1498),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 245/466 (53%), Positives = 357/466 (77%), Gaps = 3/466 (0%)

Query  10   IDTLVIGAGPGGYVAAIRAAQLGQSVLIVDKSELGGVCLNRGCIPSKALISAAHQYEAAK  69
            +D LVIGAG+GGYVAAIRAAQLG+ V++VDK+ELGGVCLNRGCIPSKALISA+++    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HGETFGIT-AENVKVDFAKTQEFKNGVVKKMTGGVSGLLKGNKVEVFNGECMFINENEAR  128
            H++T G+  + +V+VD +     K+G+V+K+T+G+  LLKGN VEV++GE  + + + A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNEHESPRYRFKNAIIATGSRPIELKPFPFGG-RILSSTEALNLPEIPKSLIVIGGGYI  187
            +  E+E   + +K+ I+A GS P+ELK+ PF+  RI+SSTEAL+L E+P+ L+V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GAELGQMYSKFGSKVTIIEGMDTVLPGFDKDMTSIVSKSMKKTGIEIFTGAKAESAEQTD  247
            G ELG  Y+KFG+KVTI+EG DT+L+G D  +T  V + +K  GI ++T+A  +++E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  KDVTVKFSVNGESKEVTAEYLLVTVGRRPNTDGELGLDLIGVELDERGMVKVDHQGRTSI  307
             +V V   V+G    +  +Y LV++GR+PNT G +GL+ IGV LD++G +K++++ +T+I
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIFAIGDIVPGLALAHKASYEGKVAAEVIAGQPSVVDYKCIPAVVFTDPECSSVGYTET  367
             H++AIGD   G  LAHKASYE+K+AAEVI+GQ SV+D++ +P V+F+DPE +  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEKGYNVKVGKFSYGANGRAVSLNAAEGFVKIVADADTGLVLGTQIVGLEASNLIAEL  427
            +AKEKGY+   ++F++ AN+RA+S++ A+GFV++VA+ +T  VLG Q+VG E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLAIEMGATLEDISLTIHAHPTLGELVMEAAEVVMGHPIHALAPRR  473
             +AIE GA  ED+SLTIHAHPTL E +MEAAE VMGH+ H L  ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

32) PPSC2_c2886 in NC_014622


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  398 bits (1498),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 245/466 (53%), Positives = 357/466 (77%), Gaps = 3/466 (0%)

Query  10   IDTLVIGAGPGGYVAAIRAAQLGQSVLIVDKSELGGVCLNRGCIPSKALISAAHQYEAAK  69
            +D LVIGAG+GGYVAAIRAAQLG+ V++VDK+ELGGVCLNRGCIPSKALISA+++    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HGETFGIT-AENVKVDFAKTQEFKNGVVKKMTGGVSGLLKGNKVEVFNGECMFINENEAR  128
            H++T G+  + +V+VD +     K+G+V+K+T+G+  LLKGN VEV++GE  + + + A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNEHESPRYRFKNAIIATGSRPIELKPFPFGG-RILSSTEALNLPEIPKSLIVIGGGYI  187
            +  E+E   + +K+ I+A GS P+ELK+ PF+  RI+SSTEAL+L E+P+ L+V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GAELGQMYSKFGSKVTIIEGMDTVLPGFDKDMTSIVSKSMKKTGIEIFTGAKAESAEQTD  247
            G ELG  Y+KFG+KVTI+EG DT+L+G D  +T  V + +K  GI ++T+A  +++E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  KDVTVKFSVNGESKEVTAEYLLVTVGRRPNTDGELGLDLIGVELDERGMVKVDHQGRTSI  307
             +V V   V+G    +  +Y LV++GR+PNT G +GL+ IGV LD++G +K++++ +T+I
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIFAIGDIVPGLALAHKASYEGKVAAEVIAGQPSVVDYKCIPAVVFTDPECSSVGYTET  367
             H++AIGD   G  LAHKASYE+K+AAEVI+GQ SV+D++ +P V+F+DPE +  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEKGYNVKVGKFSYGANGRAVSLNAAEGFVKIVADADTGLVLGTQIVGLEASNLIAEL  427
            +AKEKGY+   ++F++ AN+RA+S++ A+GFV++VA+ +T  VLG Q+VG E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLAIEMGATLEDISLTIHAHPTLGELVMEAAEVVMGHPIHALAPRR  473
             +AIE GA  ED+SLTIHAHPTL E +MEAAE VMGH+ H L  ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

33) lpdA2 in NC_014483


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  397 bits (1495),  Expect = 6e-112, Method: Compositional matrix adjust.
 Identities = 244/466 (53%), Positives = 357/466 (77%), Gaps = 3/466 (0%)

Query  10   IDTLVIGAGPGGYVAAIRAAQLGQSVLIVDKSELGGVCLNRGCIPSKALISAAHQYEAAK  69
            +D LVIGAG+GGYVAAIRAAQLG+ V++VDK+ELGGVCLNRGCIPSKALISA+++    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HGESFGIT-AENVKVDFAKTQEFKNGVVKKMTGGVSGLLKGNKVEVFNGECMFINENEAR  128
            H+++ G+  + +V+VD +     K+G+V+K+T+G+  LLKGN VEV++GE  + + + A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNEHESPRYRFKNAIIATGSRPIELKPFPFGG-RILSSTEALNLPEIPKSLIVIGGGYI  187
            +  E+E   + +K+ I+A GS P+ELK+ PF+  RI+SSTEAL+L E+P+ L+V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GAELGQMYSKFGSKVTIIEGMDTVLPGFDKDMTSIVAKSMKKTGIEIFTGAKAESAEQTD  247
            G ELG  Y+KFG+KVTI+EG DT+L+G D  +T  V + +K  GI ++T+A  +++E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  KDVTVKFSVNGESKEVTADYLLVTVGRRPNTDGELGLDLIGVELDDRGMVKVDHQGRTSI  307
             +V V   V+G    +  DY LV++GR+PNT G +GL+ IGV LDD+G +K++++ +T+I
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIFAIGDIVAGLALAHKASYEGKVAAEAIAGEPSVVDYKCMPAVVFTDPECSSVGYTET  367
             H++AIGD  +G  LAHKASYE+K+AAE I+G+ SV+D++ MP V+F+DPE +  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEKGYNVKVGKFSYGANGRAVSLNAAEGFVKIVADADTGLVLGTQIVGLEASNLIAEL  427
            +AKEKGY+   ++F++ AN+RA+S++ A+GFV++VA+ +T  VLG Q+VG E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLAIEMGATLEDISLTIHAHPTLGEIVMEAAEVVLGHPIHALAPRR  473
             +AIE GA  ED+SLTIHAHPTL E +MEAAE V+GH+ H L  ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

34) pdhD in NC_011567


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  397 bits (1495),  Expect = 6e-112, Method: Compositional matrix adjust.
 Identities = 225/447 (51%), Positives = 337/447 (76%), Gaps = 2/447 (0%)

Query  26   IRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISAGHRYEIATHSQDMGI-FAENVKVD  84
            IRAAQLG+KV +V+K++LGGVCLN GCIPSKALISA++R     H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQEWKAGVVKKLTGGVEGLLKGNKVEIVRGEAYFVDENTVRVMTENSAQTYKFKNAI  144
             + V  WK G+V+KLT+G+  LLKGN VE++ GEAY+ + +  ++  E+  Q + +K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSRPIELPTFKFS-KRVLDSTGALNLPDIPKSMVVIGGGYIGTELGTAYANFGTKIT  203
            +A GS P+EL +  F  KR++ ST AL+L ++P+ +VV+GGGYIG ELGTAYA+FG+K+T
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGADEILSGFEKQMSAVVRRRLKKKGVDVFTNALAKGVEEREDGVTVTFEVNGETKTI  263
            ILEG+D ILSG +  ++  V+R+LK  G+ V+T+AL +G E+  D V V  +V+G    I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  DAEYVLVTVGRRPNTEEMGLEQIGINMTERGLIEIDKQCRTSVPNIYAIGDVVAGPPLAH  323
            + +Y LV++GR+PNT  +GLE+IG+ + ++G+I I+++C+T++ ++YAIGD  +G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKIAAEAIAGHPSEIDYLAIPAVVFSDPECASVGYFEKQAIEEGIDVITAKFPFG  383
            KASYE+KIAAE I+G+ S ID+ A+P V+FSDPE A  G  EK+A E G + ++++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALALNETDGFLKLVLTKDDGVIIGAQIVGPNASDMIAELGLAIEAGMTAEDIAMTI  443
            AN+RAL+++++DGF+++V  K+   ++G Q+VGP+ S +IAE  +AIEAG  AED+++TI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEITMEAAEVALGSPIHIINK  470
            HAHPTL E  MEAAE  +G + H++NK
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLNK  502

35) pdhD in NC_011999


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  397 bits (1494),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 229/460 (50%), Positives = 349/460 (76%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKAMLSASHKYETAKH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKA++SAS++    KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEDYGIK-AENVTLDFSKVQEFKNGVVERLTGGVGSLLKGRKVEIVQGEAYFVDQNNLKV  129
            ++  G+K + +V +D + V   K+G+V++LT+G+ +LLKG  VE++ GEAY+ + +  K+
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MTEKASQTYTFKNAIIATGSRPIEIPNFKFN-KRVIDSTGALALPEVPKHLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL L EVP+HLVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAYANFGSKVTILEGAKDILGGFEKQMTQVVKKGLKAKGVEIVTEAMAKSAEESEN  248
             ELGTAYA+FG+KVTILEG+  IL+G +  +T+ VK+ LK  G+ ++T+A+ +++E++ +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGETHTIEADYCLVTVGRRPNTDELGLEGLGIKMTDRGIIEVDAQSRTSVEN  308
             V+V  +  G  + I+ DYCLV++GR+PNT+ +GLE +G+ + D+G+I ++ + +T++E+
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGPPLAHKASYEGKVAAEAISGEKSEVDYLGIPAVCFTEPELATVGYTEAMA  368
            +YAIGD   G  LAHKASYE+K+AAE ISG++S +D+ ++P V F++PE+A  G TE  A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLDFKASKFPYAANGRALSIGETDGFLKLITLKEDGLLIGAQVAGAGASDVIAELGL  428
            KE G +  +S+FP+ AN+RALS++++DGF+++++ K+   ++G Q+ G+  S +IAE  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIETGMTAEDIALTIHAHPTLGEITMEAAEVAMGHPIHTM  468
            AIE+G  AED++LTIHAHPTL E  MEAAE  MGH+ H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

36) pdhD in NC_006582


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  396 bits (1490),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 235/461 (51%), Positives = 342/461 (75%), Gaps = 2/461 (0%)

Query  10   VDTLVVGSGPGGYVAAIRAAQLGQKVTIVEKGSLGGVCLNVGCIPSKALIQAGHRAHLAK  69
            VD LV+G+G+GGYVAAIRAAQLG+KV +V+K+ LGGVCLN GCIPSKALI A++R    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   SSEDIGIR-AENVAIDFEKVQEWKGSVVKKLTGGVEGLLKGNKVEIIRGEAYFSGEDTVK  128
             ++ +G++ + +V +D   V  WK+++V+KLT+G+  LLKGN VE+I GEAY++  +  K
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  IMDEKSSSTYKFKHCIIATGSSPIEIPNFKYTD-RVINSTGALALKEVPKKLVVIGGGYI  187
            I  E     + +K+ I+A GS P+E+ +  + + R+I+ST AL L+EVP+ LVV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GIELTGAYSNLGSEVVVLEGTKQILPGFEKQMAKLVERKLKKNGVTFHTEAMAKGVEETD  247
            G+EL  AY+++G+ V +LEG+  IL+G +  ++K V R LK  G+T  T+A+ +G E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  NGVKVTAEIKGEEKVIEADYVLVTVGRKPNTEEIGLEGIGVEMDDRGYIKVDKQGRTSVK  307
            + V+V  ++ G E +I+ DY LV++GRKPNT  IGLE IGV +DD+G+IK++++ +T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  308  NIFAIGDIVPGPALAHKASYEAKVAAEAISGEPSEVDYLAIPAVCFSEPELATVGYNEAQ  367
            +++AIGD   G  LAHKASYEAK+AAE ISG+ S +D+ A+P V FS+PE+A  G  E +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  368  AKEAGYDVKVAKFPFAANGRALSLNDADGFMKLVTRKEDGLVIGGQIAGPNASDMIAEIG  427
            AKE GY+   ++FPF AN+RALS++DADGF+++V+ K+   V+G Q+ GP+ S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  428  LAIEAGMTAEDIALTIHAHPTLGEITMEAAEVALGTPIHTL  468
            +AIEAG  AED++LTIHAHPTL E  MEAAE  +G + H L
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

37) pdhD in NC_013791


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  395 bits (1485),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 237/462 (52%), Positives = 354/462 (77%), Gaps = 2/462 (0%)

Query  10   VDTLVIGSGPGGYVAAIRAAQLGQKVTIVEKGTLGGVCLNVGCIPSKALISAGHRYHNAK  69
            VD LVIG+G+GGYVAAIRAAQLG+KV +V+K+ LGGVCLN GCIPSKALISA++R  + K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HSEDMGVTAEG-VSINFDKVQEWKGSVVKKLTGGVEGLLKGNKVEIVQGEAYFASENSVR  128
            H++ MG+   G V ++   V  WK+++V+KLT+G+  LLKGN VE++ GEAY++  +  +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  IMDEKSSQTYNFKNCIIATGSSPIELPSFKYTE-RVINSTGALALKEVPKKMVVIGGGYI  187
            I  E   Q +++K+ I+A GS P+EL S  + + R+I+ST AL L+EVP+ +VV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GIELTGAYSNMGTEVVVLEGGKQILPGFEKQMSKLVEKRLKKNGVAFHTEALAKGVEETE  247
            G+EL  AY++ G+ V +LEG+  IL+G +  ++K V ++LK  G++  T+AL +G E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  NGVKVTAEVKGKEEVFEADYVLVTVGRKPNTEELGLEQIGVEMTERGLIKTDKQCRTNVS  307
            + V+V  +V GKEE+++ DY LV++GRKPNT  +GLE+IGV + ++G+IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  308  NIYAIGDIIEGPALAHKASYegkiaaeaiagekseiDYLAIPAVVFSDPELATVGYSEQE  367
            ++YAIGD   G  LAHKASYE+KIAAE I+G++S ID+ A+P V+FSDPE+A  G +E+E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  368  AKDAGYDIVAAKFPFAANGRALSLNDTDGFMKLITRKEDGLVIGAQIAGPNASDMIAELG  427
            AK+ GY+ V+++FPF AN+RALS++D+DGF+++++ K+   V+G Q+ GP+ S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  428  LAIETGMTAEDIALTIHAHPSLGEITMEAAEVAIGTPIHIVK  469
            +AIE+G  AED++LTIHAHP+L E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

38) pdhD in NC_002570


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  394 bits (1483),  Expect = 5e-111, Method: Compositional matrix adjust.
 Identities = 243/470 (52%), Positives = 357/470 (76%), Gaps = 2/470 (0%)

Query  2    VVGDFAKEVDTLVIGSGPGGYVAAIRAAQLGQSVTIVEKGTLGGVCLNVGCIPSKALISA  61
            + G+  K VD LVIG+G+GGYVAAIRAAQLG+ V +V+K+ LGGVCLN GCIPSKALISA
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   GHRYHNALHSDDLGIK-AENVTLDFSKVQEWKASVVNKLTGGVEGLLKGNKVEIIKGEAY  120
            ++R  +  H++ +G+K + +V +D + V  WK ++VNKLT+G+  LLKGN VE+I GEAY
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  121  FASEDSVRIMDEKNATTYKFKNCIIATGSRPIELPNFKYS-KRIINSTGALALEEVPKKL  179
            ++  +  +I  E +   + +K+ I+A GS P+EL +  +  KRII+ST AL L+EVP+ L
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  180  VVIGGGYIGIELTGAYSNLGSDVVVLEGGKQILPGFEKQMAKLVERKLKKNGVSFHTEAM  239
            VV+GGGYIG+EL  AY+++G+ V +LEG+  IL+G +  ++K V R LK  G++  T+A+
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  240  AKGVEETEDGVKVTAEIKGKEEVFEADYVLVTVGRKPNTDELGLEQIGVELTERGLIKVD  299
             +G E+T D V+V  ++ GKEE+++ DY LV++GRKPNT+ +GLE+IGV L ++G+IK++
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  300  KQCRTNLSNIYAIGDVIEGPALAHKASYegkiaaeaiagekseiDYLAIPAVVFSDPELA  359
            ++C+TN+ ++YAIGD   G  LAHKASYE+KIAAE I+G++S ID+ A+P V+FSDPE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  360  TVGYTETEAKEAGYDVTAAKFPFAANGRALSLNDADGFMKLITRKEDGLVIGAQIAGPNA  419
              G TE EAKE GY+  +++FPF AN+RALS++DADGF+++++ K+   V+G Q+ GP+ 
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  420  SDMIAELGLAIETGMTAEDIALTIHAHPSLGEITMEAAEVALGTPIHIVK  469
            S +IAE  +AIE+G  AED++LTIHAHP+L E  MEAAE  +G + H+++
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

39) pdhD in NC_017568


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  393 bits (1480),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 231/460 (51%), Positives = 350/460 (77%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLNVSHRFEQAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL++ S+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   GADLGIT-AENVSLDFDKVQSFKGSVVSKLTGGVESLLKGNKVEIVRGEAYFVDEHSLRV  129
            +  +G+  + +V +D   V   K+++V+KLT+G+ +LLKGN VE++ GEAY+ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDDKSAQTYNFKNAIVATGSRPIQIPNFEFGG-RILDSTGALNLQEVPKKLVVVGGGYIG  188
              +   Q +++K+ I+A GS P+++ +  F+  RI+ ST AL+LQEVP+ LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAYANFGTEVTILEGAKEILGGFEKQMVAPVKKEMKAKGMIIETEALAKSAEETDN  248
             ELGTAYA+FG+ VTILEG+  IL+G +  +   VK+++K  G+ + T+AL +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEVKGEEKTIEADYVLVTVGRRPNTDELGLEEVGVKLTDRGLVEVDKQSRTSVDS  308
             V+V  +V G E  I+ DY LV++GR+PNT+ +GLE++GV L D+G++ ++++ +T+++ 
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIAGQNSEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I+GQNS +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLDIKASKFPYQANGRALSLNDTNGFVKLVTLKEDDTLIGAQVVGTNASDVIAELGL  428
            KE G +  +S+FP+QAN+RALS++D++GFV++V+ K+   ++G Q+VG + S +IAE  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTVHAHPTLGEMSMEAAEKALGLPIHTM  468
            AIEAG NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

40) SPSINT_0805 in NC_014925


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  393 bits (1480),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 231/460 (51%), Positives = 350/460 (77%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLNVSHRFEQAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL++ S+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   GADLGIT-AENVSLDFDKVQSFKGSVVSKLTGGVESLLKGNKVEIVRGEAYFVDEHSLRV  129
            +  +G+  + +V +D   V   K+++V+KLT+G+ +LLKGN VE++ GEAY+ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDDKSAQTYNFKNAIVATGSRPIQIPNFEFGG-RILDSTGALNLQEVPKKLVVVGGGYIG  188
              +   Q +++K+ I+A GS P+++ +  F+  RI+ ST AL+LQEVP+ LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAYANFGTEVTILEGAKEILGGFEKQMVAPVKKEMKAKGMIIETEALAKSAEETDN  248
             ELGTAYA+FG+ VTILEG+  IL+G +  +   VK+++K  G+ + T+AL +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEVKGEEKTIEADYVLVTVGRRPNTDELGLEEVGVKLTDRGLVEVDKQSRTSVDS  308
             V+V  +V G E  I+ DY LV++GR+PNT+ +GLE++GV L D+G++ ++++ +T+++ 
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIAGQNSEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I+GQNS +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLDIKASKFPYQANGRALSLNDTNGFVKLVTLKEDDTLIGAQVVGTNASDVIAELGL  428
            KE G +  +S+FP+QAN+RALS++D++GFV++V+ K+   ++G Q+VG + S +IAE  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTVHAHPTLGEMSMEAAEKALGLPIHTM  468
            AIEAG NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

41) pdhD in NC_004193


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  392 bits (1475),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 225/445 (51%), Positives = 341/445 (77%), Gaps = 2/445 (0%)

Query  26   IRAAQLGQKVTIVDKGALGGVCLNVGCIPSKALIEAGHKYENAHGSEDLGIK-TDKVEVD  84
            IRAAQLG+KV +VDK+ LGGVCLN GCIPSKALI A+++  +   ++ +G+K ++ V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FSKVQDWKGSVVNKLTSGVESLLKGNKVDIVKGEAYFVDANTAKIAGESSSQTYKFKDCI  144
             + V  WK+++VNKLT G+ +LLKGN V+++ GEAY+ +A+ AKI  E   Q + +KD I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSSPIEIPSFKFSD-RVLDSTGALSLKEIPKKMVVIGSGYVGTELGTAYANFGTEIT  203
            +A GS P+E+ S  F + R++ ST AL L+E+P+ +VV+G+GY+G ELGTAYA+FG+ +T
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  FLEGAKDILGGFEKQMTQLVKKGLKKKGATIITEAMAKGVEETKDGVKVSYEVNGKEETI  263
            +LEG+  IL+G +  +T+ VK+ LK  G T+IT+A+ +G E+T D V+V  +V+GKEE I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  EADYVLVTVGRRPNTDELGLEQMGVKMTDRGHIEIDKQCKTSVDNIYAIGDIVEGPALAH  323
            + DY LV++GR+PNT+ +GLE++GV + D+G I I+++C+T+++++YAIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYEGKIAAEAISGEKSEIDYVGIPAVAFTEPELATVGLSEQDAKDAGYDVKVGKFPFG  383
            KASYE+KIAAE ISG++S ID+ ++P V F++PE+A  GL+E++AK+ GY+   ++FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLNNTEGFLKLITRKDDGLVIGGQIAGPNASDMISEIGLAIEAGMTAEDISLTI  443
            AN+RALS+++++GF+++++ K+   V+G Q+ GP+ S +I+E  +AIEAG  AED+SLTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEITMEAAEVALGTPIHTM  468
            HAHPTL E  MEAAE  +G + H +
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHML  500

42) BATR1942_05075 in NC_014639


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  392 bits (1476),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 230/462 (50%), Positives = 351/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVDKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++V+KLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAILATGSRPIELPNFKYSD-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ ILA GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVKRNLKKKGNVEIHTKAMAKSVEEKA  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  VKR+LK  G + + T A+ ++ E+ +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVNGEEKTVDADYVLITVGRRPNTDELGLEQVGVEMTDRGVVKTDKQCRTNVP  308
            D V V  +V+G E  ++ DY L+++GR+PNT+ +GLE++GV + D+G +K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLEIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

43) pdhD in NC_014103


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  392 bits (1473),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 235/462 (51%), Positives = 353/462 (77%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALIAAGHRFEHAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKALI+A++R  H KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEDMGI-IAENVTVDFSKVQEFKNGVVNKLTGGVEGLLKGNKVDIVKGEAYFVDSETVRV  129
            ++ MG+ ++ +V VD + V   K+G+VNKLT+G+  LLKGN V+++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYKFKNAILATGSRPIEIPGFKFSE-RVINSTGALALKEVPKKLVVIGGGYIG  188
              E+  Q + +K+ ILA GS P+E+ +  F + R+I+ST AL L+EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAFANFGTEVTFVEAADEILAGFEKQMSSLVKRNLKKKGNVEIYTKAMAKGVEETA  248
             ELGTA+A+FG+ VT++E++D IL+G +  ++  VKR+LK  G + + T A+ +G E+T+
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVQVTFEVGGESKVIDADYVLVTVGRRPNTDELGLEQVGVKMTDRGLIEIDNQTRTSVS  308
            D V+V  +V+G   +I+ DY LV++GR+PNT+ +GLE++GV + D+G+I I+N+ +T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIFAIGDIVTGPPLAHKASYEGKIAAEVIAGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            +++AIGD   G  LAHKASYE+KIAAEVI+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLAVKASKFPFaangralalnaaEGFLKLITRKEDGVVVGAQIAGPSASDMIAELG  428
            AKE G    +S+FPF AN+RAL+++ A+GF+++++ K+   V+G Q+ GP  S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGVTAEDIALTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIEAG  AED++LTIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

44) pdhD in NC_017138


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  392 bits (1473),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 235/462 (51%), Positives = 353/462 (77%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALIAAGHRFEHAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKALI+A++R  H KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEDMGI-IAENVTVDFSKVQEFKNGVVNKLTGGVEGLLKGNKVDIVKGEAYFVDSETVRV  129
            ++ MG+ ++ +V VD + V   K+G+VNKLT+G+  LLKGN V+++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYKFKNAILATGSRPIEIPGFKFSE-RVINSTGALALKEVPKKLVVIGGGYIG  188
              E+  Q + +K+ ILA GS P+E+ +  F + R+I+ST AL L+EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAFANFGTEVTFVEAADEILAGFEKQMSSLVKRNLKKKGNVEIYTKAMAKGVEETA  248
             ELGTA+A+FG+ VT++E++D IL+G +  ++  VKR+LK  G + + T A+ +G E+T+
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVQVTFEVGGESKVIDADYVLVTVGRRPNTDELGLEQVGVKMTDRGLIEIDNQTRTSVS  308
            D V+V  +V+G   +I+ DY LV++GR+PNT+ +GLE++GV + D+G+I I+N+ +T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIFAIGDIVTGPPLAHKASYEGKIAAEVIAGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            +++AIGD   G  LAHKASYE+KIAAEVI+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLAVKASKFPFaangralalnaaEGFLKLITRKEDGVVVGAQIAGPSASDMIAELG  428
            AKE G    +S+FPF AN+RAL+++ A+GF+++++ K+   V+G Q+ GP  S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGVTAEDIALTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIEAG  AED++LTIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

45) Bsel_1605 in NC_014219


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  392 bits (1473),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 239/460 (52%), Positives = 352/460 (77%), Gaps = 2/460 (0%)

Query  10   VDTLVIGSGPGGYVAAIRAAQLGQKVTIVERENLGGVCLNVGCIPSKALIEAGHRYHDAG  69
            VD LVIG+G+GGYVAAIRAAQLG+KV +V++ +LGGVCLN GCIPSKALI A++R  +  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   NSEDMGISVN-EVKLDFSKVQDWKQSVVEKLTGGVEGLLKGNEVDIVKGEAFFVDDSTVR  128
            +++ MG+ V+ EV++D + V  WK+++V+KLT+G+  LLKGN V+++ GEA++ +    +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  IMDEKTSQTYKFENCIVATGSTPIELPAFKWSDK-VMSSTGALGLTEVPEKLVVIGGGYI  187
            I  E   Q + + + I+A GS P+EL +    +K ++SST AL L EVP+ LVV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GVELGSAYANLGSEVTILEGTKQILPGFEKQMSQLVSRRLKKMGVTIKTEAFAQEMEETD  247
            G+ELG+AYA++G+ VTILEG+  IL+G +  +++ V R+LK +G+T+ T+A+ Q  E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  TGVKIKAEVKGKEEEFEGDVLLVTVGRKPNTDELGLEQAGVELTDKGLVKIDKQCRTSAS  307
              V++  +V GKEE ++ D  LV++GRKPNT+ +GLE+ GV L D+G++KI+++C+T+  
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  308  HIYAIGDIVEGPALAHKASYEAKVaaeaisgeaseiDYTAIPEVVFSGPELAQVGLTEQA  367
            H+YAIGD   G  LAHKASYEAK+AAE ISG+ S ID+ A+P V+FS+PE+A  GLTE+ 
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  368  AKDAGYDVIASKFPFQANGRALSLNDSEGFMKMVTRKEDGLVLGVQIAGHNASDMISEAC  427
            AK+ GY+ ++S+FPFQAN+RALS++D++GF+++V+ K+   VLGVQ+ G + S +I+EA 
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  428  VAIEAGMTAEDLALTIHAHPSLGEITMETAEVALGMPVHI  467
             AIEAG  AEDL+LTIHAHP+L E  ME+AE  +G + H+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

46) pdhD in NC_014019


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  391 bits (1471),  Expect = 5e-110, Method: Compositional matrix adjust.
 Identities = 234/462 (51%), Positives = 353/462 (77%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALIAAGHRFEHAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKALI+A++R  H KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEDMGI-IAENVTVDFSKVQEFKNGVVNKLTGGVEGLLKGNKVDIVKGEAYFVDSETVRV  129
            ++ MG+ ++ +V VD + V   K+G+VNKLT+G+  LLKGN V+++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYKFKNAILATGSRPIEIPGFKFSE-RVINSTGALALKEVPKKLVVIGGGYIG  188
              E+  Q + +K+ ILA GS P+E+ +  F + R+I+ST AL L+EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAFANFGTEVTFVEAADEILAGFEKQMSSLVKRNLKKKGNVEIYTKAMAKGVEETA  248
             ELGTA+A+FG+ VT++E++D IL+G +  ++  VKR+LK  G + + T A+ +G E+T+
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  NGVQVTFEVGGESKVIDADYVLVTVGRRPNTDELGLEQVGVKMTDRGLIEIDNQTRTSVS  308
            + V+V  +V+G   +I+ DY LV++GR+PNT+ +GLE++GV + D+G+I I+N+ +T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIFAIGDIVTGPPLAHKASYEGKIAAEVIAGEPAEIDYLGIPAVVFSEPELASVGYTEAQ  368
            +++AIGD   G  LAHKASYE+KIAAEVI+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLAVKASKFPFaangralalnaaEGFLKLITRKEDGVVVGAQIAGPSASDMIAELG  428
            AKE G    +S+FPF AN+RAL+++ A+GF+++++ K+   V+G Q+ GP  S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGVTAEDIALTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIEAG  AED++LTIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

47) A7A1_0566 in NC_019896


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  391 bits (1469),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSSPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

48) pdhD in NC_014551


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1467),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 229/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K+ LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V+VD   V  WK ++VNKLT+G+  LLKGN VEV+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LSIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            ++IE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

49) pdhD in NC_017190


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1467),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 230/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K+ LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V+VD   V  WK ++VNKLT+G+  LLKGN VEV+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

50) pdhD in NC_017188


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1467),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 230/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K+ LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V+VD   V  WK ++VNKLT+G+  LLKGN VEV+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

51) pdhD in NC_017191


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1467),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 230/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K+ LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V+VD   V  WK ++VNKLT+G+  LLKGN VEV+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G IK +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIDGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD  +G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G E V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

52) pdhD in NC_000964


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

53) pdhD in NC_020507


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

54) I653_07505 in NC_020832


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

55) BSn5_19380 in NC_014976


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

56) pdhD in NC_017196


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

57) pdhD in NC_018520


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

58) I33_1641 in NC_017195


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

59) pdhD in NC_020244


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  390 bits (1468),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 349/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G++K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

60) GYO_1800 in NC_016047


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  389 bits (1464),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVSVDFTKVQEWKTSVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYTE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G +K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

61) pdhD in NC_014479


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  389 bits (1464),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 228/462 (50%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVSVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYTE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG+D IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G +K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

62) pdhD in NC_021362


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  388 bits (1461),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 350/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEEMGIT-AENVKVDFTKVQEWKASVVNKLTGGVEGLLKGNKVDIVKGEAYFVDSNSVRV  129
            ++ MG+  + +V+VD   V  WK ++VNKLT+G+  LLKGN V+++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSD-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTEVVILEGGEEILPGFEKQMSSLVKRNLKKKGNVEIHTKAMAKGVEEKA  248
             ELGTAYA+FG+ V ILEG++ IL+G +  ++  VKR+LK  G + + T A+ +G E+ +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEQTIDADYVLVTVGRVANTDELGLEQVGVEMTDRGIIKTDKQCRTNIP  308
            D V V  +V G E+ I+ DY LV++GR +NT+ +GLE++GV + D+G+IK +++C+TNI 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiageaaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLAVTAAKFPFAANGRALSLNETDGFLKLVTRKEDGLVIGAQIAGASASDMISELS  428
            AKE G    +++FPF AN+RALS++++DGF+++V+ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGMTAEDIAMTIHAHPTLGEITMEAAEVAIGMPIHVVK  470
            +AIEAG  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

63) pdhD in NC_006270


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  388 bits (1461),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 350/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEEMGIT-AENVKVDFTKVQEWKASVVNKLTGGVEGLLKGNKVDIVKGEAYFVDSNSVRV  129
            ++ MG+  + +V+VD   V  WK ++VNKLT+G+  LLKGN V+++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSD-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTEVVILEGGEEILPGFEKQMSSLVKRNLKKKGNVEIHTKAMAKGVEEKA  248
             ELGTAYA+FG+ V ILEG++ IL+G +  ++  VKR+LK  G + + T A+ +G E+ +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEQTIDADYVLVTVGRVANTDELGLEQVGVEMTDRGIIKTDKQCRTNIP  308
            D V V  +V G E+ I+ DY LV++GR +NT+ +GLE++GV + D+G+IK +++C+TNI 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiageaaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLSVTAAKFPFAANGRALSLNETDGFLKLVTRKEDGLVIGAQIAGASASDMISELS  428
            AKE G    +++FPF AN+RALS++++DGF+++V+ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGMTAEDIAMTIHAHPTLGEITMEAAEVAIGMPIHVVK  470
            +AIEAG  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

64) pdhD in NC_006322


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  388 bits (1461),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 232/462 (51%), Positives = 350/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEEMGIT-AENVKVDFTKVQEWKASVVNKLTGGVEGLLKGNKVDIVKGEAYFVDSNSVRV  129
            ++ MG+  + +V+VD   V  WK ++VNKLT+G+  LLKGN V+++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSD-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTEVVILEGGEEILPGFEKQMSSLVKRNLKKKGNVEIHTKAMAKGVEEKA  248
             ELGTAYA+FG+ V ILEG++ IL+G +  ++  VKR+LK  G + + T A+ +G E+ +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEQTIDADYVLVTVGRVANTDELGLEQVGVEMTDRGIIKTDKQCRTNIP  308
            D V V  +V G E+ I+ DY LV++GR +NT+ +GLE++GV + D+G+IK +++C+TNI 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiageaaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLSVTAAKFPFAANGRALSLNETDGFLKLVTRKEDGLVIGAQIAGASASDMISELS  428
            AKE G    +++FPF AN+RALS++++DGF+++V+ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGMTAEDIAMTIHAHPTLGEITMEAAEVAIGMPIHVVK  470
            +AIEAG  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

65) SAOUHSC_01043 in NC_007795


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  388 bits (1461),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 346/460 (76%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVESLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+ +LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

66) SAVC_04640 in NC_016912


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  388 bits (1461),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 346/460 (76%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVESLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+ +LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGTKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

67) SSP1693 in NC_007350


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  388 bits (1461),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 350/460 (77%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGELGGVCLNVGCIPSKALLHASHRYDETKN  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K+ELGGVCLN GCIPSKAL+ AS+R  + K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLKFDKVQEFKQSVVKKLTGGVEGLLKGNKVEIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V +    V   K+++V+KLT+G+  LLKGN VE++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKHAIIATGSRPIEIPNFKFGD-RVIDSTGALNLQDVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F++ R+I ST AL+LQ+VP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEVKGEEQTIDADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSVEN  308
             V+V  +V G E+ I+ DY LV++GR+PNT+ +GLE++G+ + D+G++ ++++ +T++E+
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGLPLAHKASYEAKVAAEVIAGEASEVDYIGMPAVCFTEPELATVGYTEAQA  368
            ++AIGD   G  LAHKASYEAK+AAEVI+G+ S +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAVTASKFPYAANGRALSLDDTTGFVKLLTLKEDNTLVGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D+ GFV++++ K+ + ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGMNAEDLALTIHAHPTLGEMSMEAAEKALGLPIHTM  468
            AIE+G NAEDL+LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

68) HPL003_20290 in NC_016641


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  388 bits (1459),  Expect = 4e-109, Method: Compositional matrix adjust.
 Identities = 237/466 (51%), Positives = 357/466 (77%), Gaps = 3/466 (0%)

Query  10   IDTLVIGAGPGGYVAAIRAAQLGQSVLIVDQSELGGVCLNRGCIPSKALISAAHQYEAAQ  69
            +D LVIGAG+GGYVAAIRAAQLG+ V++VD++ELGGVCLNRGCIPSKALISA+++    +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HGESFGIT-AENVKVDFAKTQEFKNSVVKKMTGGVSGLLKGNKVEVFNGECMFINENEAR  128
            H+++ G+  + +V+VD +     K+++V+K+T+G+  LLKGN VEV++GE  + + + A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNEHESPRYRFKNAIIATGSRPIELKPFPFGG-RILSSTEALNLPEIPKSLIVIGGGYI  187
            +  E+E   + +K+ I+A GS P+ELK+ PF+  RI+SSTEAL+L E+P+ L+V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GAELGQMYSKFGSKVTIIEGMDTVLPGFDKDMTSIVAKSMKKTGIEIFTGAKAESAEQTD  247
            G ELG  Y+KFG+KVTI+EG DT+L+G D  +T  V + +K  GI ++T+A  +++E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  KDVTVKFSVNGESKEVTADYLLVTVGRRPNTDGELGLDMIGVELDERGLVKVDHQGRTSI  307
             +V V   V+G    +  DY LV++GR+PNT G +GL+ IGV LD++G++K++++ +T+I
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIFAIGDIVAGLALAHKASYEGKVAAEAIAGEPSVVDYKCIPAVVFTDPECSSVGYTES  367
             H++AIGD  +G  LAHKASYE+K+AAE I+G+ SV+D++ +P V+F+DPE +  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEKGHNVKVGKFSYGANGRAVSLNSTEGFVKIVADADTGLVLGTQIVGLEASNLIAEL  427
            +AKEKG +   ++F++ AN+RA+S++ ++GFV++VA+ +T  VLG Q+VG E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLAIEMGATLEDISLTIHAHPTLGEIVMEAAEVVLGHPIHALAPRR  473
             +AIE GA  ED+SLTIHAHPTL E +MEAAE V+GH+ H L  ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

69) pdhD in NC_017340


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

70) pdhD in NC_018608


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

71) MS7_1053 in NC_017351


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

72) SAAG_02205 in NC_022113


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

73) pdhD in NC_022222


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

74) ST398NM01_1093 in NC_017673


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

75) pdhD in NC_021670


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

76) lpdA in NC_021554


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

77) SAKOR_01018 in NC_022226


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

78) pdhD in NC_002951


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

79) lpdA in NC_017343


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

80) SAOV_1040 in NC_017337


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

81) pdhD in NC_017763


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

82) SaurJH1_1178 in NC_009632


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

83) SaurJH9_1156 in NC_009487


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

84) pdhD in NC_017341


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

85) pdhD in NC_017338


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

86) pdhD in NC_017349


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

87) M013TW_1028 in NC_016928


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

88) BN843_10010 in NC_021059


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

89) pdhD in NC_002952


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

90) SAMSHR1132_09430 in NC_016941


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

91) SAS1031 in NC_002953


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

92) pdhD in NC_009782


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

93) pdhD in NC_002758


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

94) pdhD in NC_003923


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

95) pdhD in NC_002745


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

96) pdhD in NC_009641


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

97) pdhD in NC_007622


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

98) pdhD in NC_022443


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

99) pdhD in NC_022442


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

100) pdhD in NC_020529


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

101) pdhD in NC_020564


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

102) pdhD in NC_020532


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

103) pdhD in NC_020533


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

104) pdhD in NC_020537


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

105) lpdA in NC_017333


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

106) SAT0131_01134 in NC_017347


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

107) lpd2 in NC_017342


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

108) pdhD in NC_017331


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

109) pdhD in NC_020566


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

110) pdhD in NC_020536


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

111) pdhD in NC_020568


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  387 bits (1457),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

112) lpdA in NC_007793


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  386 bits (1452),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNGIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

113) pdhD in NC_010079


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  386 bits (1452),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 227/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNGIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

114) lpd in NC_017167


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  385 bits (1449),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 237/472 (51%), Positives = 360/472 (77%), Gaps = 6/472 (1%)

Query  2    VVGDIVEEVEVLVIGAGPGGYVAAIRAAQLGKSVTIVDKAELGGVCLNRGCIPSKALISA  61
            + G++   V++LVIGAG+GGYVAAIRAAQLGK V +VDKAELGGVCLNRGCIPSKALISA
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   AHHYEAAKESPFPGIETTATF--DFKKVQEWKQSVVDKMTSGVQQLLKGNKVNVIHGEAF  119
            +++    K++   G+  ++    D   V  WK+++V+K+T G++ LLKGN V+VI GEA+
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FTKPNEVRVMQENGSQRLQFQHCILATGSRPIELKNLPLG-KRVIDSTGALSLDHVPKRL  178
            +T ++  ++  E+  Q + +++ ILA GS P+ELK++P++ KR+I ST AL L++VP++L
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  179  VVVGGGYIGIELGQTFAKFGSQVTIIEGLDSILALFDKQMVRLVEKNLKKYNVQIETNAL  238
            VVVGGGYIG+ELG ++AKFG++VTI+EG D+IL+  D  + + V ++LK   + + T+AL
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  239  AQGVEETEDGVKLTYKDKDGNEKTIEADYVLVTVGRRPNTDEIGLQDAGIELTDKGLVKV  298
             QG E+T D V++   + DG+E  I+ DY LV++GR+PNT+ IGL++ G+ L D+G++K+
Sbjct  272  VQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  299  DQQCRTTNPNVFAIGDIVPGPALAHKASYEGKVAAEVIAGKPSIVDYRCIPSVVFSDPEM  358
            +++C+T   +V+AIGD   G  LAHKASYE+K+AAEVI+G+ S++D++ +P V+FSDPE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  359  ASVGLTEEEAK-KEYGQVAVGRFPYAANGRATALNATDGFIKLIANKENGVLVGAQVVGV  417
            A  GLTE EAK K Y  V+ +RFP+ AN+RA +++ +DGF++++A+K+   ++G Q+VG 
Sbjct  391  AYTGLTEKEAKEKGYETVS-SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  418  EASNIIAELGLAIEMSATLEDIALTIHAHPTLGEMVMEAAEVGLGEPIHIIK  469
            E S++IAE  +AIE +A  ED++LTIHAHPTL E +MEAAE  +G++ H+++
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

115) Aaci_0454 in NC_013205


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  385 bits (1449),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 238/472 (51%), Positives = 360/472 (77%), Gaps = 6/472 (1%)

Query  2    VVGDIVEEVEVLVIGAGPGGYVAAIRAAQLGKSVTIVDKAELGGVCLNRGCIPSKALISA  61
            + G++   V++LVIGAG+GGYVAAIRAAQLGK V +VDKAELGGVCLNRGCIPSKALISA
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   AHHYEAAKESPFPGIETTATF--DFKKVQEWKQSVVKKMTSGVQQLLKGNKVNVIHGEAF  119
            +++    K++   G+  ++    D   V  WK+++V+K+T G++ LLKGN V+VI GEA+
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FTKPNEVRVMQENGSQRLQFQHCILATGSRPIELKNLPLG-KRVIDSTGALSLDHVPKRL  178
            +T ++  ++  E+  Q + +++ ILA GS P+ELK++P++ KR+I ST AL L++VP++L
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  179  VVVGGGYIGIELGQTFAKFGSQVTIIEGLDSILALFDKQMVRLVEKNLKKYNVQIETNAL  238
            VVVGGGYIG+ELG ++AKFG++VTI+EG D+IL+  D  + + V ++LK   + + T+AL
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  239  AQGVEETEDGVKLTYKDKDGNEKTIEADYVLVTVGRRPNTDEIGLQDAGIELTDKGLVKV  298
             QG E+T D V++   + DG+E  I+ DY LV++GR+PNT+ IGL++ G+ L D+G++K+
Sbjct  272  VQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  299  DQQCRTTNPNVFAIGDIVPGPALAHKASYEGKVAAEVIAGKPSIVDYRCIPSVVFSDPEM  358
            +++C+T   +V+AIGD   G  LAHKASYE+K+AAEVI+G+ S++D++ +P V+FSDPE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  359  ASVGLTEEEAK-KEYGQVAVGRFPYAANGRATALNATDGFIKLVANKENGVLVGAQVVGV  417
            A  GLTE EAK K Y  V+ +RFP+ AN+RA +++ +DGF+++VA+K+   ++G Q+VG 
Sbjct  391  AYTGLTEKEAKEKGYETVS-SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  418  EASNIIAELGLAIEMSATLEDIALTIHAHPTLGEMVMEAAEVGLGEPIHIIK  469
            E S++IAE  +AIE +A  ED++LTIHAHPTL E +MEAAE  +G++ H+++
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

116) SLGD_01779 in NC_013893


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  385 bits (1448),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 230/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLKFDKVQEFKQSVVNKLTGGVEGLLKGNKVEIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V +    V   K+++VNKLT+G+  LLKGN VE++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFEFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKDKGIEIITEAMAKNAEETEN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +K+ GI +IT+A+ + +E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEQTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIDN  308
             V+V  +  G E+ I+ DY LV++GR+PNT+ +GLE++G+ + D+G++ ++++ +T+I++
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAISGQASEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE ISGQ S +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLEYKASKFPYAANGRALSLDDTTGFVKLITLKEDDTLIGAQVAGNGASDIISELGL  428
            KE G E  +S+FP+ AN+RALS+ D+ GFV++++ K+   ++G Q+ G   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM  468
            AIEAG NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

117) pdhD in NC_017353


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  385 bits (1448),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 230/460 (50%), Positives = 345/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLKFDKVQEFKQSVVNKLTGGVEGLLKGNKVEIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V +    V   K+++VNKLT+G+  LLKGN VE++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFEFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKDKGIEIITEAMAKNAEETEN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +K+ GI +IT+A+ + +E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEQTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIDN  308
             V+V  +  G E+ I+ DY LV++GR+PNT+ +GLE++G+ + D+G++ ++++ +T+I++
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAISGQASEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE ISGQ S +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLEYKASKFPYAANGRALSLDDTTGFVKLITLKEDDTLIGAQVAGNGASDIISELGL  428
            KE G E  +S+FP+ AN+RALS+ D+ GFV++++ K+   ++G Q+ G   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM  468
            AIEAG NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

118) SE0794 in NC_004461


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  384 bits (1445),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 226/460 (50%), Positives = 347/460 (76%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQN  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNYQKVQEFKTSVVNKLTGGVEGLLKGNKVEIVRGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN VE++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKHAIIATGSRPIEIPNFEFG-KRVIDSTGALNLQEVPNKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVPN LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGIEIVTEAMAKSAEETEN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE GI ++T+A+ +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEQTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIEN  308
             V+V  +  G E+ I+ DY LV++GR+PNT+ +GLE++G+ + D+G++ ++++ +T+IE+
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGLPLAHKASYEGKVAAEAIDGQAAEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            ++AIGD   G  LAHKASYE+K+AAE I GQ + +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLSIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGMNAEDIALTVHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIE+G NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

119) pdhD in NC_002976


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  384 bits (1445),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 226/460 (50%), Positives = 347/460 (76%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQN  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNYQKVQEFKTSVVNKLTGGVEGLLKGNKVEIVRGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN VE++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKHAIIATGSRPIEIPNFEFG-KRVIDSTGALNLQEVPNKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVPN LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGIEIVTEAMAKSAEETEN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE GI ++T+A+ +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEQTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIEN  308
             V+V  +  G E+ I+ DY LV++GR+PNT+ +GLE++G+ + D+G++ ++++ +T+IE+
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGLPLAHKASYEGKVAAEAIDGQAAEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            ++AIGD   G  LAHKASYE+K+AAE I GQ + +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLSIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGMNAEDIALTVHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIE+G NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

120) pdhD in NC_013450


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  384 bits (1444),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 226/460 (50%), Positives = 344/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNFQKVQEFKSSVVNKLTGGVEGLLLGNKVNIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LL GN V+++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE G+ ++T+A+ +++E+T++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++GV + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G +E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM  468
            AIEAG NAED++LTIHAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

121) pdhD in NC_007168


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 228/460 (50%), Positives = 342/460 (75%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLKFDKVQEFKKSVVNKLTGGVEGLLKGNKVEIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V +    V   K ++VNKLT+G+  LLKGN VE++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKHAIIATGSRPIEIPNFEFG-KRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ KR+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSDVTILEGAKEILGGFEKQMVQPVKKGMKEKGVEIITEAMAKNAEETEN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  + + VK+ +KE G+ +IT+A+ + +E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDKQSRTSIDN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++G+ + D+G++ ++++ +T+I++
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAISGQASEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE ISGQ S +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLDYKASKFPYAGNGRALSLDDTTGFVKLITLKEDDTVIGAQIAGNGASDIISELGL  428
            KE G +  +S+FP+ +N+RALS+ D+ GFV++++ K+   V+G Q+ G   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGMPIHTM  468
            AIEAG NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

122) Btus_0313 in NC_014098


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  381 bits (1434),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 243/471 (52%), Positives = 365/471 (78%), Gaps = 3/471 (0%)

Query  2    VVGEFTTEVDLLIIGGGPGGYVAAIRAAQLGKKVTLVERDKLGGVCLNVGCIPSKALIAA  61
            + GE    VDLL+IG+G+GGYVAAIRAAQLGKKV LV++  LGGVCLN GCIPSKALI+A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   AHRYEDVKKLDEIGIQ-AGDVRVDFAKVQTWKQGVVDKLTGGVASLMKANKVEVIKGEAL  120
            ++R  ++K  + +G++ +G+V+VD + V  WK+G+V+KLT+G+ +L+K+N VEVI GEA 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  121  FANDREARVINGYEANRYRFNQCIIATGSRPIELKDLPFGG-RVISSTEALSLQEIPRRL  179
            +++ + A++    E + + +++ I+A GS P+ELK +PF+  R+ISSTEAL LQE+P +L
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  180  LVIGGGYIGIELGTVFAKFGTQVTVLEGTESILPTFekevlrlverrlkklnvTVVTSAM  239
            +V+GGGYIG+ELGT +AKFG++VT+LEG+++IL+  +  + + V R+LK + +TV+T A+
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  240  AKGVEETADGVTVTASVKGEEQRYEADYVLVTVGRRPNTEDLGLDMAGVR-TEKGLIQVD  298
             +G E+T+D V V   V G E+  + DY LV++GR+PNT  +GL+  GV   ++G+I+++
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  299  KQGRTSVGHIFAVGDVVPGPALAHKasyegkvaaeaaageasevDYRVIPAVVFSDPEIA  358
            ++ +T++ H++A+GD   G  LAHKASYE+K+AAE  +G+ S +D++ +P V+FSDPE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  VVGLSESEAKEKGLDVVTGRFPFAANGRALSLTDAEGFVKLVADKSSGELLGAQIVGPEA  418
              GL+E EAKEKG + V++RFPF AN+RALS++DA+GFV++VA+K++  +LG Q+VGPE 
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  419  SDLIAEAALAIEMGATLEDVALTIHAHPTLGEVMMEAAEVGLGRPVHIAPR  469
            S LIAEA +AIE GA  ED++LTIHAHPTL E +MEAAE  +G++ H+  +
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

123) pdhD in NC_018704


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  380 bits (1430),  Expect = 9e-107, Method: Compositional matrix adjust.
 Identities = 229/445 (52%), Positives = 338/445 (76%), Gaps = 2/445 (0%)

Query  26   IRAAQTGQKVTIVDKGALGGVCLNVGCIPSKALIEAGTRYSQAKNSEEMGI-ITKEVSVD  84
            IRAAQ G+KV +VDK+ LGGVCLN GCIPSKALI A+ R  + K+++ MG+ ++ EV VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FEKVQEWKAGIVNKLTSGVESLLKGNKVDIVKGEAYFVDRNTVRIMDDKSSQTYTFKNCI  144
               V  WK GIVNKLT G+ +LLKGN V+++ GEAY+ + +  +I  +   Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  IATGSTPIEIPSFKFSD-RILDSTGALALKEIPKKLVVIGGGYIGTELGAAYSDFGTEVT  203
            +A GS P+E+ S  F + RI+ ST AL L+E+P+ LVV+GGGYIG ELG+AY+ FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  ILEGASEILSGFEKDMTAVLKRNLKKKNVQIITNAMAKSSEETDTGVKVTYEAKGKEETI  263
            ILEG+  ILSG +  +T  +KR+LK   + +IT+A+ +++E+T+  V+V  +  GKEE I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  264  EADYVLVTVGRYPNTREIGLEEVGIELDERGLVKIDKQCRTNIDNIYAIGDIVAGPPLAH  323
            + DY LV++GR PNT  IGLE++G+ LD++G++KI+++C+TNI+++YAIGD  +G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  324  KASYegkiaaeaiagekseiDYNGIPAVMFAAPEIASVGYTEAEAKEAGFDVKASKFPFA  383
            KASYE+KIAAE I+G++S ID++++P V+F+ PE+A  G TE EAKE G++  +S+FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  384  ANGRALSLGNTDGFVRLVTRKEDGLILGGQVVGANASDIISEIGLAVETGMTAEDLALTI  443
            AN+RALS++++DGFV++V+ K+   +LG Q+VG++ S +I+E  +A+E+G  AEDL+LTI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  444  HAHPTLGEVTMEAAEVATGRPIHIM  468
            HAHPTL E  MEAAE   G++ H++
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHML  500

124) pdhD in NC_012121


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  380 bits (1430),  Expect = 9e-107, Method: Compositional matrix adjust.
 Identities = 224/460 (49%), Positives = 347/460 (76%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGELGGVCLNVGCIPSKALLHVSHVFQEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K+ELGGVCLN GCIPSKAL+  S+  ++ +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNLGI-IAKDVELKFDKVQDFKKSVVNKLTGGVEGLLKGNKVEIVKGEAYFHDSNSLRV  129
            ++ +G+ ++ +V++    V   K ++VNKLT+G+  LLKGN VE++ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFKFGE-RVIDSTGALNLQEAPKKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F++ R+I ST AL+LQE P+ LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGTEVTILEGAKDILGGFEKQMTQPVKKKMKEKGIEIVTEAMAKSAEETAD  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE GI ++T+A+ +++E+T+D
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEKSIEADYVLVTVGRRPNTDEMGLEELGLKFADRGLLEVDDQSRTSIKN  308
             V+V  +  G E  I+ DY LV++GR+PNT+ +GLE++G+ + D+G++ ++++ +T+I +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGLPLAHKASYEGKVAAEAISGEKSAVDYIGMPAVCFTEPELATVGYNEAQA  368
            ++AIGD   G  LAHKASYE+K+AAE ISG++S +D+ +MP V F++PE+A  G  E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLDYKASKFPYAANGRALSLDDTTGFVKLLTLKEDGTLIGAQVVGTGASDIIAELGL  428
            KE G +  +S+FP+ AN+RALS+ D+ GFV++++ K+   ++G Q+VG   S +IAE  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM  468
            AIE+G NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

125) Bsph_1366 in NC_010382


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  379 bits (1423),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 229/463 (50%), Positives = 354/463 (77%), Gaps = 2/463 (0%)

Query  11   DTLVIGSGPGGYVAAIRAAQTGQKVTIVEKNVLGGVCLNVGCIPSKALISVGHRFEQAKH  70
            D LVIG+G+GGYVAAIRAAQ G+KV +V+K  LGGVCLN GCIPSKALIS ++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGI-IASDVKLDFSKAQAFKDSVVKKLTGGVEGLLKGNKVEIVQGEAYFVDAHSVRI  129
            ++ MG+ ++++V++D +     KD++V+KLT+G+  LLKGN VE++ GEAY+ +AH  +I
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  INGESAQTYTFNNVIIATGSRPVEIPTFKFSE-RVLNSTGALSLQEVPGKLVVIGGGYIG  188
               +  Q ++++++I+A GS PVE+ +  F + R+++ST AL LQEVP  LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGSAYANLGSQVTIIEGGKDILAGFEKQMTQIVKKGLKKKGVEIEVNASAkgveeten  248
             ELG+AYA++G++VTI+EG+  IL+G +  +T+ VK+ LK  G+ +  +A  +G E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  gvvvtyevggeekkveADYVLVTVGRRPNTDEMGLAEIGVEFGERGLINVDKQCRTNISN  308
             V V  +V+G E  ++ DY LV++GR+PNT+ +GL +IGV ++++G+I+++++C+TNI +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVAGPQLAHKASYEGKVAAEAIAGEKSVVDYLAVPAVCFTDPEMATVGYNEEQA  368
            +YAIGD  +G  LAHKASYE+K+AAE I+G++SV+D+ A+P V F+DPE+A  G  E +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KAEGIEYTAAKFPFAANGRALALNQSEGFVKLVARKEDGLLIGAQIVGAGASDMIAEMGL  428
            K  G E  +++FPF AN+RAL++++++GFV++VA K+   ++G Q+VG+  S +IAE  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEGGMTAEDIALTIHAHPTLGEITMETAEVLLGNPIHIVAKK  471
            AIE+G  AED++LTIHAHPTL E  ME+AE ++G++ H++ KK
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKK  503

126) pdhD in NC_015634


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  378 bits (1422),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 224/462 (49%), Positives = 345/462 (75%), Gaps = 3/462 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKQFIGGVCLNVGCIPSKALISAAHRYEYATE  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K  +GGVCLN GCIPSKALISA++R     +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEALGITVE-NAKIDFGKVQEWKSGVVKKLTGGVESLLKGNKIDIVRGEAYFVDDHTLRV  129
            ++++G+ V  + ++D   V  WK G+V+KLT+G+ +LLKGN ++++ GEAY+ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYTFKNAILATGSRPIEIPSFKFSE-RVIDSTGALSLKEIPEKLVIIGGGVIG  188
              E   Q +++K+ ILA GS P+E+ S  F + R+I ST AL L+E+P+ LV++GGG IG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  MELGTAYAKFGTKVTILEGAKDIIGGAFEKQMTSLVVRKLKKRGVEIITEAMAkgveeke  248
            +ELGTAYAKFG+KVTILEG+  I++G+ +  +T  V R LK  G+ +IT+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGT-DPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  249  ngvvvTYEAKGQEQKVEGDYVLVTVGRRPNTDELGLEQLNLKMTDRGIIEVDKQCRTSVP  308
            + V V  +  G+E+ ++ DY LV++GR+PNT+ +GLE++ + + D+G+I ++++C+T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIVPGPQLAHKASYEGKIAAEAISGQPAEVDYLGIPVIVFSDPELATVGYTEQQ  368
            ++YAIGD   G  LAHKASYE+KIAAE ISGQ + +D+ ++P ++FSDPE+A  G TE++
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIDYAVGKFPYGANGRALALEAGEGFVKLITRKEDGLLIGGQIVGISASDIISEIG  428
            AKE G +   ++FP+ AN+RAL++  ++GFV++++ K+   ++G Q+VG   S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGMTAEDIALTIHAHPTLGEITMEAAEAALGTPIHILK  470
            +AIEAG  AED++LTIHAHPTL E  MEAAE+ +G + H+L+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

127) Bcoa_0220 in NC_016023


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  378 bits (1421),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 224/462 (49%), Positives = 345/462 (75%), Gaps = 3/462 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKQFIGGVCLNVGCIPSKALISAAHRYEYATE  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K  +GGVCLN GCIPSKALISA++R     +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SEALGIAVE-NAKIDFGKVQEWKSGVVKKLTGGVESLLKGNKIDIVRGEAYFVDDHTLRV  129
            ++++G+ V  + ++D   V  WK G+V+KLT+G+ +LLKGN ++++ GEAY+ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYTFKNAILATGSRPIEIPSFKFSE-RVIDSTGALSLKEIPEKLVIIGGGVIG  188
              E   Q +++K+ ILA GS P+E+ S  F + R+I ST AL L+E+P+ LV++GGG IG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  MELGTAYAKFGTKVTILEGAKDIIGGAFEKQMTSLVVRKLKKRGVEIITEAMAkgveeke  248
            +ELGTAYAKFG+KVTILEG+  I++G+ +  +T  V R LK  G+ +IT+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGT-DPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  249  ngvvvTYEAKGQEQKVEGDYVLVTVGRRPNTDELGLEQLNLKMTDRGIIEVDKQCRTSVP  308
            + V V  +  G+E+ ++ DY LV++GR+PNT+ +GLE++ + + D+G+I ++++C+T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIVPGPQLAHKASYEGKIAAEAISGQPAEVDYLGIPVIVFSDPELATVGYTEQQ  368
            ++YAIGD   G  LAHKASYE+KIAAE ISGQ + +D+ ++P ++FSDPE+A  G TE++
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGIDYAVGKFPYGANGRALALEAGEGFVKLITRKEDGLLIGGQIVGISASDIISEIG  428
            AKE G +   ++FP+ AN+RAL++  ++GFV++++ K+   ++G Q+VG   S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGMTAEDIALTIHAHPTLGEITMEAAEAALGTPVHILK  470
            +AIEAG  AED++LTIHAHPTL E  MEAAE+ +G + H+L+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

128) GYMC10_2404 in NC_013406


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  375 bits (1410),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 233/464 (51%), Positives = 350/464 (76%), Gaps = 3/464 (0%)

Query  10   IDTLVIGAGPGGYVAAIRAAQLGQKVLIVDKSELGGVCLNRGCIPSKALIAAAHQFESAK  69
            +D LVIGAG+GGYVAAIRAAQLG+KV++VDK+ELGGVCLNRGCIPSKALI+A+++    K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HADAFGISVE-NVTVDFAKTQEFKNGVVKKMTGGVAGLLKGNKVEVFNGECMFINENEAR  128
            HA++ G+ V  +V VD +     K+G+V+K+T+G+  LLKGN VEV++GE  + + + A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNDHESPRYRFKNCIIATGSRPIELKPFPFGG-RILSSTEALNLPEVPKSMIVIGGGYI  187
            +  ++E   + +K+ I+A GS P+ELK+ PF+  RI+SSTEAL+L EVP+ ++V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GAELGQMYSKFGSKVTIIEGLDSVLAGFDKDMTSLVTKNMKKTGIEIITGAKAESAEQND  247
            G ELG  Y+KFG+KVTI+EG D++L+G D  +T  V +++K  GI +IT+A  +++E+ +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  KEVTVKYSVNGETKEVTADYLLVTVGRRPNTdgelgldligldmdERGFVKVDHQGRTSI  307
             EV V   V+G    +  DY LV++GR+PNT+     ++  +   ++GF+K++++ +T+I
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD-DQGFIKINNKCQTNI  338

Query  308  PHIFAIGDIVSGLALAHKASYEGKVAAEAISGMPSVVDYKCIPAVVFTDPECSSVGYTEA  367
             H++AIGD  +G  LAHKASYE+K+AAE ISG  SV+D++ +P V+F+DPE +  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEKGHKVKAGKFPYAGNGRSVSLNHPEGFVKIVAEEGTGLILGAQIVGLEASNLIAEL  427
            +AKEKG    +++FP+ +N+R++S+++++GFV++VAE  T  +LG Q+VG E S+LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLAIEMGATLEDVALTIHAHPTLGEIVMEAAELVMGHPIHIIAR  471
             +AIE GA  ED++LTIHAHPTL E +MEAAE VMGH+ H++ +
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

129) BcerKBAB4_3796 in NC_010184


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  372 bits (1400),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 331/447 (75%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKSNLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++K++LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVNGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V+G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGIKMTDRGIIEIDEQCRTNISNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++G+ + D+G+I I+++C+TNI ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEVISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVAVSKFPF  383
            HKASYE+K+A EVISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

130) lpd in NC_017481


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  372 bits (1400),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 207/445 (47%), Positives = 343/445 (78%), Gaps = 3/445 (0%)

Query  26   IHAAELGQKVTVIEREYIGGVCLNVGCIPSKALIEAAHHYQHAMDSQEMGLQVTAA-KLD  84
            I+AA+LG+KV ++++  +GGVCLN GCIPSKALI A+++ +H  +++ MGL+V++  ++D
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FDKTIEWKNNVVARLTGGVASLFKKHKIDVIWGNAYLKDSHSLRVISDDDKAQTYTFNNL  144
                + WK+ +V +LT+G+ +L+K + ++VI G+AYL ++H  ++  +D+  Q +++++L
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDE-EQIFSYKDL  174

Query  145  IIATGSHPIEIPNFKFEG-RVLDSTGALNLTEVPKELVVVGGGYIGSELASAYANLGSHV  203
            I+A GS P+E+ +  F+  R++ ST AL+L EVP++LVVVGGGYIG EL++AYA++G+ V
Sbjct  175  ILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKV  234

Query  204  TILEGGDMILANYEKDLVKVVEHHFSEQGVDIYTNAIAKNAEQTDKDVTVTFEVDGEEKK  263
            TILEG+D IL+  +  L K V +H+ E G+ + T+A+ + +E+T+ +V V  +VDG E  
Sbjct  235  TILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  ITADYVIVSVGRRPNTSNMGLEQAGVSVDERGLIPVDAQSRSNIPNIYAIGDVTKGYALA  323
            I  DY +VS+GR+PNT+++GLE+ GV +D++G+I ++ + ++NI ++YAIGD + G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAAEAISGKPTVIDYHAMPAVCYTDTSIATTGLTLAEAKEKGFDAKKAQFPF  383
            HKASYE+K+AAE ISG+ +VID++AMP V ++D  +A TGLT  EAKEKG+++  ++FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRAISMGETDGFIRLVFEKETGVLLGAQMVGSNASDLISELTLAIECGSTVEDVALT  443
             AN+RA+S++++DGF+++V EK+T  +LG QMVG++ S LI+E  +AIE G+  ED++LT
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHPHPSLSEAVMDTADVAIGFPTNI  468
            IH+HP+L+E++M++A+  +G +T++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHM  499

131) lpd in NC_007929


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  372 bits (1400),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 207/445 (47%), Positives = 343/445 (78%), Gaps = 3/445 (0%)

Query  26   IHAAELGQKVTVIEREYIGGVCLNVGCIPSKALIEAAHHYQHAMDSQEMGLQVTAA-KLD  84
            I+AA+LG+KV ++++  +GGVCLN GCIPSKALI A+++ +H  +++ MGL+V++  ++D
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FDKTIEWKNNVVARLTGGVASLFKKHKIDVIWGNAYLKDSHSLRVISDDDKAQTYTFNNL  144
                + WK+ +V +LT+G+ +L+K + ++VI G+AYL ++H  ++  +D+  Q +++++L
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDE-EQIFSYKDL  174

Query  145  IIATGSHPIEIPNFKFEG-RVLDSTGALNLTEVPKELVVVGGGYIGSELASAYANLGSHV  203
            I+A GS P+E+ +  F+  R++ ST AL+L EVP++LVVVGGGYIG EL++AYA++G+ V
Sbjct  175  ILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKV  234

Query  204  TILEGGDMILANYEKDLVKVVEHHFSEQGVDIYTNAIAKNAEQTDKDVTVTFEVDGEEKK  263
            TILEG+D IL+  +  L K V +H+ E G+ + T+A+ + +E+T+ +V V  +VDG E  
Sbjct  235  TILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  ITADYVIVSVGRRPNTSNMGLEQAGVSVDERGLIPVDAQSRSNIPNIYAIGDVTKGYALA  323
            I  DY +VS+GR+PNT+++GLE+ GV +D++G+I ++ + ++NI ++YAIGD + G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAAEAISGKPTVIDYHAMPAVCYTDTSIATTGLTLAEAKEKGFDAKKAQFPF  383
            HKASYE+K+AAE ISG+ +VID++AMP V ++D  +A TGLT  EAKEKG+++  ++FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRAISMGETDGFIRLVFEKETGVLLGAQMVGSNASDLISELTLAIECGSTVEDVALT  443
             AN+RA+S++++DGF+++V EK+T  +LG QMVG++ S LI+E  +AIE G+  ED++LT
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHPHPSLSEAVMDTADVAIGFPTNI  468
            IH+HP+L+E++M++A+  +G +T++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHM  499

132) MY9_1600 in NC_017743


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1394),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 227/462 (50%), Positives = 348/462 (76%), Gaps = 3/462 (0%)

Query  11   DTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKH  70
            D LVIGAG+GGYVAAIRAAQLG+KV +V+KA LGGVCLN GCIPSKALI+A++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDDMGIT-AENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRV  129
            ++ MG+  + +V VD   V  WK ++VNKLT+G+  LLKGN V+V+ GEAY+ +++  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIG  188
              E+  Q +++K+ I+A GS P+EL +  + + R+++ST AL L+E+P+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  TELGTAYANFGTelvileggeeilpgfeKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERP  248
             ELGTAYA+FG+ + ILEG++ IL+G +  ++  V R+LK  G + + T+A+ +G E+  
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVVKTDKQCRTNVP  308
            D V V  +V G E  ++ DY L+++GR+PNT+ +GLE++G+ + D+G +K +++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIIEGPPLAHKASYEGKiaaeaiagepaeiDYLGIPAVVFSEPELASVGYTEAQ  368
            ++YAIGD   G  LAHKASYE+KIAAE I+G+ + ID+ ++P V+FS+PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELS  428
            AKE G + V+++FPF AN+RALS++++DGF+++++ K+   V+G Q+ G+  S +I+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK  470
            +AIE+G  AED+++TIHAHPTL E  MEAAE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

133) pdhD in NC_011658


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

134) pdhD in NC_003909


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

135) pdhD in NC_006274


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

136) BCK_15385 in NC_018491


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

137) BCN_3870 in NC_016771


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

138) pdhD in NC_011969


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

139) pdhD in NC_008600


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

140) YBT020_19510 in NC_017200


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  371 bits (1393),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 221/447 (50%), Positives = 330/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

141) pdhD in NC_012472


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

142) BC3970 in NC_004722


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

143) pdhD in NC_011725


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

144) bcf_19720 in NC_016779


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

145) pdhD in NC_011772


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

146) pdhD in NC_014171


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

147) pdhD in NC_018877


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

148) BTF1_18150 in NC_018508


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

149) MC28_3258 in NC_018693


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVSNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

150) pdhD in NC_017208


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

151) H175_ch4037 in NC_020376


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

152) pdhD in NC_005957


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

153) HD73_4253 in NC_020238


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1390),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

154) pdhD in NC_012659


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

155) pdhD in NC_007530


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

156) pdhD in NC_003997


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

157) pdhD in NC_012581


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

158) H9401_3986 in NC_017729


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

159) BAS3880 in NC_005945


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

160) pdhD in NC_011773


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 219/447 (49%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

161) lpdA in NC_017491


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1391),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/461 (48%), Positives = 344/461 (75%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++++ +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  LLK + +E I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNK  307
            G+ V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLA  367
             ++YAIGD   G  LAHKASYE+KIAAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTDENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI  467
              A+E+G NAEDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

162) pdhD in NC_013199


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1391),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/461 (48%), Positives = 344/461 (75%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++++ +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  LLK + +E I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNK  307
            G+ V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLA  367
             ++YAIGD   G  LAHKASYE+KIAAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTDENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI  467
              A+E+G NAEDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

163) LOCK900_1292 in NC_021723


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1391),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/461 (48%), Positives = 344/461 (75%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++++ +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  LLK + +E I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNK  307
            G+ V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLA  367
             ++YAIGD   G  LAHKASYE+KIAAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTDENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI  467
              A+E+G NAEDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

164) LOCK908_1374 in NC_021725


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1391),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 220/461 (48%), Positives = 344/461 (75%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++++ +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  LLK + +E I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNK  307
            G+ V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLA  367
             ++YAIGD   G  LAHKASYE+KIAAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTDENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI  467
              A+E+G NAEDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

165) LRHM_1269 in NC_017482


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 220/461 (48%), Positives = 344/461 (75%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGSGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+GSGGYVAAIRAA++G+KV +++++ +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  LLK + +E I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNK  307
            G+ V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIFAIGDIVPGAALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLA  367
             +++AIGD   G  LAHKASYE+KIAAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTDENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI  467
              A+E+G NAEDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

166) pdhD in NC_013198


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  370 bits (1389),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 220/461 (48%), Positives = 344/461 (75%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGSGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+GSGGYVAAIRAA++G+KV +++++ +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  LLK + +E I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNK  307
            G+ V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIFAIGDIVPGAALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLA  367
             +++AIGD   G  LAHKASYE+KIAAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTDENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI  467
              A+E+G NAEDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

167) pdhD in NC_014335


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  369 bits (1386),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 218/446 (49%), Positives = 328/446 (74%), Gaps = 3/446 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEEAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  E+  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQG-NVNIHTKAMAKGVEETETGVKVSFEVKGEIQTV  262
            ++E++D IL+G +  ++  VKR L+   + + T A+ +G E+T   V+V  +V G  + +
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  263  EADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVPGPPLAH  322
            + DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  323  KASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPFA  382
            KASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  383  ANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQTI  442
            AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ TI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  443  HAHPTLGEITMEAAEVALGMPIHIVK  468
            HAHPTL E  MEAAE  +G + H+++
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHMLN  501

168) B1NLA3E_05740 in NC_021171


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  367 bits (1378),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 230/461 (50%), Positives = 346/461 (76%), Gaps = 2/461 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGAVGGVCLNVGCIPSKALIAAGHKYETAIH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K+ +GGVCLN GCIPSKALI+A+++     H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SESIGIT-AENVKVDFTKVQEWKAGVVKKLTGGVEGLLKGNKVNIVRGEAYFVDANTLRV  129
            ++++G+  + +V+VD   V  WK G+V+KLT+G+  LLKGN V+++ GEAY+ +A+  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDENSAQTYTFNHAIIATGSRPIELPAFKYS-KRVLDSTGALALPEipkkivvigggyig  188
              E+  Q +++++ I+A GS P+EL +  +  KR++ ST AL L E+P+ +VV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAYANFGTQVTILEGTDEILNGFETQMSSIVKKNLKKKGADIITNALAKGVVETEN  248
             ELG AYA+FG++VTILEG+D IL+G +  ++  VK++LK  G  +IT+AL +G  +T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  SVTIKYEVKGEEKAVEADYVFVMVGRRPNTDELGIEQVGIEMTDRGVIKIDKQCRTSVGN  308
             V +  +V G E  ++ DY +V +GR+PNT+ +G+E++G+ + D+G IKI+++C+T++ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGPPLAHKASYEAKIAAEAIAGLQTEIDYLGIPAVVFSDPELASVGYTEKQA  368
            +YAIGD   G  LAHKASYEAKIAAE I+G ++ ID+ ++P V+FSDPE+A  G TEK+A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLEVNASKFPFAANGRALALDATDGFLKLVTRKADGLVIGAQIAGSSASDMIAELGL  428
            KE G E  +S+FPF AN+RAL++  +DGF+++V+ K    V+G Q+ G+  S +IAE  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIEAGMTAEDLAMTIHAHPTLGEITMEAAEVAIGHPIHIVK  469
            AIEAG  AEDL++TIHAHPTL E  MEAAE  +GH+ H+++
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

169) BTG_29580 in NC_018500


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  367 bits (1381),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 220/447 (50%), Positives = 329/447 (74%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAIIEKANLGGVCLNVGCIPSKALINAGHRYENAMHSDDMGIT-AENVKVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  +  H++ MG+  + +V+VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAV  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ +
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVNIHTKAMAKGVEETETGVKVSFEVKGEIQT  263
            ++E++D IL+G +  ++  VKR L+  G + + T A+ +G E+T   V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQVGVKMTDRGIIEIDEQCRTNVPNIYAIGDIVLGPPLA  323
            ++ DY LV++GR+PNT  IGLE++GV + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVAVEAISGHASAIDYIGIPAVCFTDPELASVGYTKKQAEEAGMTVTVSKFPF  383
            HKASYE+K+A E ISG+ S ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISEIGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

170) pdhD in NC_007576


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  367 bits (1381),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 222/461 (49%), Positives = 357/461 (78%), Gaps = 3/461 (0%)

Query  10   LETVVIGSGPGGYVAAIRAAEMGQKVTVIERENIGGICLNVGCIPSKALISAGHRLQEAK  69
            ++ +VIG+G+GGYVAAIRAA++G+KV ++++ ++GG+CLN GCIPSKALISA++R+++ K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   NSEVFGVSTTGAT-LDFAKTQDWKQHQVVEKLTGGISMLFKKHKIDVLDGSAFLVDEHSL  128
            +++  G+  +G   +D +    WK+  +V+KLT+GI  L+K + ++V+ G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIKEESAQTYSFKNLIIATGSRPIEIKGFKFN-KRVIDSTGGLNLTEVPKELVVIGGGY  187
            ++  E+  Q +S+K+LI+A GS P+E+K+  F+ KR+I ST +L+L EVP++LVV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGAYANLGAHVTILEGTDSILPNFEKDMVQLVTKNFKTKGVDVITGAMAKESIET  247
            IG EL+ AYA++GA VTILEG+D+IL+  +  + + V +++K  G+ VIT+A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  DQNVTVKYEVGGKEEQLVADYVMVTVGRRPNTDDMGLEQAGIKMADRGLIEVDQQGQTNI  307
            +++V V  +V+GKEE +  DY +V++GR+PNT+ +GLE+ G+ + D+G+I ++++ QTNI
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KGIYAIGDIVSGAALAHkasyeakiaaeaiagkkVIVDYKAMPAVCYTDPELATTGLTVA  367
              +YAIGD  +G  LAHKASYEAKIAAE I+G++ ++D++AMP V ++DPE+A TGLT  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKEKGYNAKGFKFPFAANGRALSLAETDGFVRLVTNTDDNTLLGAQVAGVGASDLISEL  427
            EAKEKGY++ + +FPF AN+RALS++++DGFV++V++ + + +LG Q+ G   S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLAIESGMNAEDLALTIHPHPTLSEAIMDDAELALGLPIHI  468
             +AIE+G NAEDL+LTIH+HPTL+E++M+ AE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

171) A284_08350 in NC_020164


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  367 bits (1379),  Expect = 9e-103, Method: Compositional matrix adjust.
 Identities = 226/460 (50%), Positives = 347/460 (76%), Gaps = 2/460 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +V+K++LGGVCLN GCIPSKAL+ AS+R  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SENLGV-IAESVSLNYEKVQEFKSSVVNKLTGGVEGLLKGNKVEIVKGEAYFVDNNSLRV  129
            ++ +G+ ++  V ++   V   K ++VNKLT+G+  LLKGN VE++ GEAY+ + +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MDEKSAQTYNFKNAIIATGSRPIEIPNFEFG-NRVIDSTGALNLQEVPGKLVVVGGGYIG  188
              E   Q +++K+ I+A GS P+E+ +  F+ +R+I ST AL+LQEVP  LVVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  SELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGIEIVTEAMAKSAEETEN  248
             ELGTA+A+FG+ VTILEG+  IL+G +  +T+ VK+ +KE GI ++T+A+ +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEAKGEEQTIEADYVLVTVGRRPNTDelgleelglkfgerglIEVDKQSRTSINN  308
             V+V  +  G E+ I+ DY LV++GR+PNT+ +GLE++G+ ++++G+I ++++ +T+I++
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELAQVGYTEAQA  368
            +YAIGD   G  LAHKASYEAK+AAE I GQ + +D+ +MP V F++PE+A  G TE +A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEEGLSIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGL  428
            KE G    +S+FP+ AN+RALS+ D++GFV++++ K+   ++G Q+VG   S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGMNAEDIALTVHAHPTLGEMSMEAAEKAIGYPIHTM  468
            AIE+G NAED++LT+HAHPTL E  MEAAE  +G + H +
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

172) LSEI_1308 in NC_008526


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  366 bits (1375),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 341/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

173) LBPG_00518 in NC_022112


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  366 bits (1375),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 341/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGINAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G++  G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

174) LCBD_1516 in NC_017474


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 340/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGIHAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G+   G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

175) pdhD in NC_010999


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 340/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGIHAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G+   G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

176) LC2W_1481 in NC_017473


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 340/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGIHAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G+   G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

177) LOCK919_1492 in NC_021721


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 340/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGIHAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G+   G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

178) pdhD in NC_018641


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 340/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGIHAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G+   G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

179) LCAZH_1302 in NC_014334


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  365 bits (1373),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 340/461 (74%), Gaps = 4/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALINAGHRYQDAL  69
            +D +VIG+G+GGYVAAIRAA++G+KV +++ + +GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EASTFGIHAKGA-DLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTAFLKDDHSL  128
            +A+T G+   G  ++D      WK+  +V+ LT G+  L+K + ++ I G A+L + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFG-KRILDSTGGLNLPEVPKEFVVIGGGY  187
            ++   D  Q +++K+LI+A GS P+E+K+  F+ KRI+ ST +L+L EVP+++VV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAMAKEAEDT  247
            IG EL++AYA++GA VTILEG+ +IL+  +  + + V   +K  G+TVIT+A+ + +E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVDAQGRTNK  307
            G  V+V    DGKE+ I  DY +V++GR+PNT+ +GL+ +GV   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELATTGMTVA  367
             ++YAIGD   G  LAHKASYE+K+AAE ISG+ S +D++AMP V F+DPE+A TG+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGT-VIGGQVAGAGASDLISEL  426
            EAK+KG  + +S+FPF AN+RALS+++++GFV++V++ N   V+G Q+ G+  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  TVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI  467
              A+E+G N EDL+LTIH+HPTL+E +M+ AE  +G + ++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

180) Bcer98_2671 in NC_009674


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  364 bits (1368),  Expect = 7e-102, Method: Compositional matrix adjust.
 Identities = 223/447 (50%), Positives = 333/447 (75%), Gaps = 3/447 (0%)

Query  26   IRAAQLGQKVAVIEKANLGGVCLNVGCIPSKALINAGHRFEHAKHSDDMGI-IAENVTVD  84
            IRAAQLG+KV +++KA+LGGVCLN GCIPSKALI+A++R  H KH++ MG+ ++ +V VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  85   FTKVQEWKNGVVKKLTGGVEGLLKGNKVEIIRGEAYFVDANTLRVMTEDAAQTYTFKNAI  144
               V  WK+G+V+KLT+G+  LLKGN VE+I GEAY+ +A+  ++  ED  Q +++K+ I
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLI  175

Query  145  LATGSTPIEIPGFKYS-KRVINSTGALSLPEIPKKLVVIGGGYIGMELGTAYANFGTEVT  203
            LA GS P+E+ +  +  KR+I+ST AL L E+P+ LVV+GGGYIG+ELGTAYA+FG+ VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  204  VVEAGDEILAGFEKAMSSVVKRALQKKGNVTIHTKAMAKGVEETENGVKVSFEVKGEVQT  263
            ++E++D IL+G +  ++  VKR L+  G +T+ T A+ +G E+T + V+V  +V G  + 
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  264  VEADYVLVTVGRRPNTQEIGLEQLGIKMTDRGLIEIDEQCRTNVPNIYAIGDIVPGPPLA  323
            ++ DY LV++GR+PNT  IGLE++G+ + D+G+I I+++C+TN+ ++YAIGD   G  LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  324  HKASYEGKVaaeaisghaaaIDYIGIPAVCFTDPELASVGYTKKQAEEAGMSVAVSKFPF  383
            HKASYE+K+AAE ISG+ + ID+ ++P V F+DPE+A  G T K+A E G     S+FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  384  AANGRALSLNSTDGFLQLVTRKEDgllvgaqvagagaSDIISELGLAIEAGMTAEDIAQT  443
             AN+RALS++ +DGF+Q+V+ K+   ++G Q+ G+  S +I+E  +AIEAG  AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  444  IHAHPTLGEITMEAAEVALGMPIHIVK  470
            IHAHPTL E  MEAAE  +G + H+++
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHMLN  501

181) Tmar_1670 in NC_014831


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  363 bits (1363),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 234/512 (46%), Positives = 350/512 (69%), Gaps = 41/512 (8%)

Query  2    VVGEVATETEVLVIGGGPGGYVAAIRAAQLGKDVTLVEKDRLGGVCLNVGCIPSKALIDA  61
            + GEV    ++LVIG+G+GGYVAAIRAAQLGK V LV+K  LGGVCLN GCIPSKALI A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   AKAYHRLSREAERGIVVEGA-RLDFSRLQGWKQSVVQRLTGGVEQLLKGNGVTVVKGRAT  120
            +    ++ +    G+ V G  ++D + +  WK+++V++LT+G+  LLKGNGV V+ G  +
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EA  150

Query  121  FTGPNQVLVENPGGGNEVYRFKHCILATGSRPVELPGFAFDGVRILDSTDALALDHLPLR  180
            +    ++   +  + ++++ +K+ ILA GS PVEL + +FD  RI+ ST+AL L+++P +
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  181  LVVIGGGYIGLELGTAFAKLGSEVTVLELADQLLPGTDPELVQVVARRLRQLGVKVHTGV  240
            LVV+GGGYIGLELGTA+AK+G+ VT+LE +D +L+GTDP L + V R+L+++G+ V T+ 
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  241  RVLGWEQEPGGEGVRVVFRPEPRGEgagssgaggaggpgggaagaragaaragagapaaD  300
             V G   E  G+ V V  + + +                                     
Sbjct  271  LVQG--GENTGDEVNVHVQVDGK-------------------------------------  291

Query  301  EQAVVADAVLVSVGRRPNTDGLGLELAGVQLDERGRVKVDAQLRTTQPHIFAIGDIAPGP  360
            E+ +  D  LVS+GR+PNT+ +GLE  GV LD++G +K++ + +T   H++AIGD A G 
Sbjct  292  EEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGD  351

Query  361  MLAHKASREGIVAAEVLAGLPSAADYVAVPAPVFTDPEIATVGLTEAQARQQGYEPVVGR  420
            +LAHKAS E+ +AAEV++G  S  D+ A+P  +F+DPE+A  GLTE +A+++GYE V +R
Sbjct  352  LLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSR  411

Query  421  FPYAANGRALTLGERDGFVKLVADRETKVLLGAGIVGPEASDLVAELALAIEMGATLEDV  480
            FP+ AN+RAL++++ DGFV++VA+++TK +LG  +VGPE S L+AE  +AIE GA  ED+
Sbjct  412  FPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDL  471

Query  481  ALTIHAHPTLSEAVMEAAEAGLGHAIHVLGKR  512
            +LTIHAHPTL+E++MEAAE+ +GHA H+L K+
Sbjct  472  SLTIHAHPTLPEPLMEAAEGVMGHATHMLNKK  503

182) A11Q_696 in NC_020813


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  361 bits (1358),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 212/465 (46%), Positives = 350/465 (76%), Gaps = 3/465 (0%)

Query  5    DVVVIGSGPGGYVAAIRSAQLGFKTAIIEREALGGVCLNVGCIPSKAMITATHLLHKAQH  64
            D++VIG+G+GGYVAAIR+AQLG K  ++++  LGGVCLN GCIPSKA+I+A++ +   +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   DFKTMGLNIKGGIDVDMKTLVNWKQSVCDKMSGGVNQLLKGNSVTIIKGNAEFKNSKELT  124
              +TMGL++ G ++VDM  +V+WK+++ +K+++G+  LLKGN+V +I G+A + ++    
Sbjct  101  A-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  VKSSTGTDTIAAKYFIVATGSRPIEIPGFPFDEKNICSSTGALAFDEIPKRVVVIGGGYI  184
            +K     + ++ K +I+A GS P+E+ + PFD+K I SST AL ++E+P+++VV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEISSYLRKLGTEVTVIEANSSLLAGVVDPECAQVVTRKAEKAGIIIKYGAKAKGQKKV  244
            GLE+++   K+G+ VT++E++ ++L+G  DP  ++ V R     GI +  +A  +G  + 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSG-TDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  KDGFEVTAEINGKDEVFKADKILVTVGRRPNGDQANLKAAGIAVDERGFIKVDAQRRTNV  304
             D  +V  +++GK+E+++ D  LV++GR+PN ++  L   G+ +D++GFIK++ + +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  305  SNIFAIGDICGQPMLAHKASHEGVMVAEILSGANRVYDAKTVPAVVFTDPEIAAAGMTEA  364
             +++AIGD  G  +LAHKAS E+ + AE++SG N V D +++P V+F+DPE+A +G+TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  365  ECRAKGYNDLLISKFPFAANGRAVSMSETDGFVKMIADKKTHVLLGVHIVGPEASNLISE  424
            E + KGY+  + S+FPF AN+RA+S+S++DGFV+++A+K+T  +LGV++VGPE S+LI+E
Sbjct  399  EAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVLAIEMGARLEDLALSIHPHPTLGETMMEAAEATLGHAIHIIQK  469
            AV+AIE GA  EDL+L+IH+HPTL E +MEAAE+ +GHA H+++K
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

183) Sulac_1677 in NC_016884


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 219/473 (47%), Positives = 340/473 (72%), Gaps = 1/473 (0%)

Query  2    VVGEFTESADVLIIGGGPGGYVAAIRAAELGQSVVLVERDAIGGVCLNVGCIPSKALISV  61
            + GE     D+L+IG+G+GGYVAAIRAA+LG+ VVLV++  +GGVCLN GCIPSKALIS 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   ADQAHQAHLWAERGVMYQG-LSLDVDRIQAFRQQTVDRLTQGVRTLLEGHQVRVIEGEAR  120
            +++  +       G+   G + +D+  +   ++  V++LT+G+RTLL G+ V VI GEA 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  121  FLGPHLVRVVSTYESQKIQFEKAIIATGSRPRALAGLPFDGVRVVSSTEALAFSEVPEHL  180
            +  +H+ ++    E Q + +   I+A GS P  L ++PFD  R++SSTEAL + EVP+HL
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  181  VVVGGGYIGLELGTAWRKLGSQVTILEATPHLLPGFDRELVRPIERRLAQLGVRVMTNAR  240
            VVVGGGYIGLELGTA  K+G++VTILE++  +L+G D  L + + R+L ++G+ V+T+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  241  VETARSTDDNVVLTVTRNDGSEVLEADRVLVTVGRVPNTDGLGLSEAGITLDGGGFIPVN  300
            V+ + +T+D+V + V  ++  E+++ D  LV++GR PNT+ +GL + G+ LD+ GFI +N
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  301  ERMATKVPHLYAIGDVTPGPMLAHKASHQGLVAAEAIAGLASAFDVTAIPSVIFTDPEIA  360
            ++  T++ H+YAIGD + G +LAHKAS ++ +AAE I+G  S +D  A+P VIF+DPE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  361  SVGLTADEAKSQGYDPVVGRFPLAANGRALTLQETDGQAVVIADRETGLLLGFHWVGSQA  420
              GLT  EAK +GY+ V +RFP+ AN+RAL++ ++DG   V+A+++T  +LG + VG++ 
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  421  SSVIAEGTLALEMGATLEDLALTVHAHPTLSEAWMEAAMVALDRPVHVLRRPR  473
            SS+IAE+ +A+E GA  EDL+LT+HAHPTL+E+ MEAA   ++++ H+L + +
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

184) lpd in NC_015757


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 219/473 (47%), Positives = 340/473 (72%), Gaps = 1/473 (0%)

Query  2    VVGEFTESADVLIIGGGPGGYVAAIRAAELGQSVVLVERDAIGGVCLNVGCIPSKALISV  61
            + GE     D+L+IG+G+GGYVAAIRAA+LG+ VVLV++  +GGVCLN GCIPSKALIS 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   ADQAHQAHLWAERGVMYQG-LSLDVDRIQAFRQQTVDRLTQGVRTLLEGHQVRVIEGEAR  120
            +++  +       G+   G + +D+  +   ++  V++LT+G+RTLL G+ V VI GEA 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  121  FLGPHLVRVVSTYESQKIQFEKAIIATGSRPRALAGLPFDGVRVVSSTEALAFSEVPEHL  180
            +  +H+ ++    E Q + +   I+A GS P  L ++PFD  R++SSTEAL + EVP+HL
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  181  VVVGGGYIGLELGTAWRKLGSQVTILEATPHLLPGFDRELVRPIERRLAQLGVRVMTNAR  240
            VVVGGGYIGLELGTA  K+G++VTILE++  +L+G D  L + + R+L ++G+ V+T+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  241  VETARSTDDNVVLTVTRNDGSEVLEADRVLVTVGRVPNTDGLGLSEAGITLDGGGFIPVN  300
            V+ + +T+D+V + V  ++  E+++ D  LV++GR PNT+ +GL + G+ LD+ GFI +N
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  301  ERMATKVPHLYAIGDVTPGPMLAHKASHQGLVAAEAIAGLASAFDVTAIPSVIFTDPEIA  360
            ++  T++ H+YAIGD + G +LAHKAS ++ +AAE I+G  S +D  A+P VIF+DPE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  361  SVGLTADEAKSQGYDPVVGRFPLAANGRALTLQETDGQAVVIADRETGLLLGFHWVGSQA  420
              GLT  EAK +GY+ V +RFP+ AN+RAL++ ++DG   V+A+++T  +LG + VG++ 
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  421  SSVIAEGTLALEMGATLEDLALTVHAHPTLSEAWMEAAMVALDRPVHVLRRPR  473
            SS+IAE+ +A+E GA  EDL+LT+HAHPTL+E+ MEAA   ++++ H+L + +
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

185) lpdA1 in NC_014483


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  357 bits (1340),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 220/455 (49%), Positives = 333/455 (74%), Gaps = 8/455 (1%)

Query  7    VETLVIGSGPGGYVAALRSSQLGMKTAIVERSQLGGVCTHVGCIPSKALIAEAHRYEILR  66
            V+ LVIG+G+GGYVAA+R++QLG K  +V++++LGGVC + GCIPSKALI+ ++R   ++
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   QVN------PADAAVSFVNAQAFKQGIVNKQAGGVGFLMKTAGVSILEGEASLVDGHTAI  120
            + N      +++  V   +    K+GIVNK ++G+  L+K  GV ++ GEA L ++H A 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  121  INQNGAEQTISFKYAILATGSRPIELKAFPFGG-RILSSTEALSLPEVPSSLIVIGGGYI  179
            I+ ++ EQ +S+K  ILA GS P+ELK+ PF+  RI+SSTEAL L EVP+ L+V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  180  GIELGQMYAKFGTKVTILEGGERVLPGFEMDLVAPVVKQLKTDGVSIVTGAVAEKVVQNT  239
            G+ELG  YAKFG+KVTILEG++ +L+G +  L   V ++LK  G++++T+A+ +   +  
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  240  DTITLHYSKDQEQHHVTAEFVLVTVGRKPNTDGRLGLEHIGLPLTSRGLIETDEQCRTVI  299
            D + +H   D  ++ +  ++ LV++GRKPNT G++GLE+IG+ L  +G+I  +++C+T I
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  300  PHIFAIGDITEGPALAHKASYeakiaaeaiagqaakVDYKAMPLVVFSEPELASVGLSET  359
             H++AIGD + G  LAHKASYEAKIAAE I+GQ + +D++AMP+V+FS+PE+A  GL+E 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  360  EAKEKALPIVIGRASFAVNGRALALRAAEGYIKIVAKQGSGIVLGAQIVGVEASTLISEL  419
            EAKEK+   V +R +F  N+RAL++  A+G++++VA + +  VLG Q+VG E S+LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  420  ALAIEMGATVEDLALTIHPHPTLGEVIMEAAENAV  454
             +AIE GA  EDL+LTIH+HPTL E +MEAAE  +
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVM  493

186) pdhD.1 in NC_015601


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  357 bits (1342),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 223/461 (49%), Positives = 344/461 (75%), Gaps = 3/461 (0%)

Query  10   LDTIVIGSGPGGYVAAIRAAQLGQKVAIIEKDNIGGVCLNVGCIPSKALINAGHRYQESM  69
            +D +VIG+G+GGYVAAIRAAQLG+KV +++K ++GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   NSETFGVT-AENVKIDFTKTQAWKDEQVVNKLTSGIAMLLKKNKVEIIRGTAFFNDTHQL  128
            +++T G+  + +V++D      WKD  +VNKLT GI  LLK N VE+I G A++ ++H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVVNDESAQSYTFKHCVIATGSRPIEIKGFKFG-KRIIDSTGGLNLKEIPKKLVVIGGGY  187
            ++  ++  Q +++K+ ++A GS P+E+K+  F+ KRII ST +L+L+E+P+ LVV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGVYANLGSEITILEGAPSILPQFDKDMIKLVENEFKKKDVTIVNNAMAKDAKET  247
            IG EL+  YA++G+ +TILEG+ +IL+  D  + K V  ++K  ++T++ +A+ +++ +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  KDGVVVTYEVDGKPATIEADYVMVTVGRRPNTDDLGLQVAGVETNERGLITVDKQGRTSQ  307
             D V V  +VDGK   I+ DY +V++GR+PNT+ +GL+  GV  +++G+I ++++ +T+ 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KHIFAIGDVTPGLALAHKASYEAKVAAEAISGQPSEIDYVAIPAVCFTDPELATVGLTEK  367
             H++AIGD + G  LAHKASYEAK+AAE ISGQ S ID+ A+P V F+DPE+A  GLTEK
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDQGLTVKVSKFPFGANGRALSLNAGEGFVRLVSEKDTglllggqvagvgaSDIIAEI  427
            EAK++G     S+FPF AN+RALS++ ++GFV++V+EK+T  +LG Q+ G   S +IAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLAVEARMNVEDLSLTIHAHPTLSETVMDASEISLGLPIHI  468
             +A+EA  N EDLSLTIHAHPTL+E +M+A+E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

187) K210_00155 in NC_021354


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  357 bits (1342),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 223/461 (49%), Positives = 344/461 (75%), Gaps = 3/461 (0%)

Query  10   LDTIVIGSGPGGYVAAIRAAQLGQKVAIIEKDNIGGVCLNVGCIPSKALINAGHRYQESM  69
            +D +VIG+G+GGYVAAIRAAQLG+KV +++K ++GGVCLN GCIPSKALI+A++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   NSETFGVT-AENVKIDFTKTQAWKDEQVVNKLTSGIAMLLKKNKVEIIRGTAFFNDTHQL  128
            +++T G+  + +V++D      WKD  +VNKLT GI  LLK N VE+I G A++ ++H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVVNDESAQSYTFKHCVIATGSRPIEIKGFKFG-KRIIDSTGGLNLKEIPKKLVVIGGGY  187
            ++  ++  Q +++K+ ++A GS P+E+K+  F+ KRII ST +L+L+E+P+ LVV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGVYANLGSEITILEGAPSILPQFDKDMIKLVENEFKKKDVTIVNNAMAKDAKET  247
            IG EL+  YA++G+ +TILEG+ +IL+  D  + K V  ++K  ++T++ +A+ +++ +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  KDGVVVTYEVDGKPATIEADYVMVTVGRRPNTDDLGLQVAGVETNERGLITVDKQGRTSQ  307
             D V V  +VDGK   I+ DY +V++GR+PNT+ +GL+  GV  +++G+I ++++ +T+ 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KHIFAIGDVTPGLALAHKASYEAKVAAEAISGQPSEIDYVAIPAVCFTDPELATVGLTEK  367
             H++AIGD + G  LAHKASYEAK+AAE ISGQ S ID+ A+P V F+DPE+A  GLTEK
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDQGLTVKVSKFPFGANGRALSLNAGEGFVRLVSEKDTglllggqvagvgaSDIIAEI  427
            EAK++G     S+FPF AN+RALS++ ++GFV++V+EK+T  +LG Q+ G   S +IAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLAVEARMNVEDLSLTIHAHPTLSETVMDASEISLGLPIHI  468
             +A+EA  N EDLSLTIHAHPTL+E +M+A+E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

188) Pjdr2_2653 in NC_012914


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  356 bits (1339),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 234/464 (51%), Positives = 353/464 (77%), Gaps = 3/464 (0%)

Query  10   IDTLVIGAGPGGYVAAIRAAQLGQNVLVVEKENVGGVCLNVGCIPSKALISASHQYESIS  69
            +D LVIGAG+GGYVAAIRAAQLG++V++V+K ++GGVCLN GCIPSKALISAS++   I 
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HASAFGIT-AGDVKVEWNKVQEFKNGIVKKLTGGVASLLKANKVQYFNGEVMFINENEAR  128
            HA++ G+  +G+V+V+   V   K+GIV+KLT+G+ +LLK+N V+ ++GE  + + + A+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VFNDQEAPRYRFKNCIIATGSRPIELKAFPFSG-RIVSSTGALSLPEIPKSiivigggyi  187
            +  ++E   + +K+ I+A GS P+ELK+ PF   RI+SST AL L E+P+ ++V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  gielgQMYSKFGTKVTIIEGGDAILPGFDKDMGSIVAKKLKGTNVDIVTGAMAQGAEQTD  247
            G+ELG  Y+KFG+KVTI+EG+D+IL+G D  +   V + LK   + ++T+A+ QG+E+T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  KDVTLTYKVGDKEEKVTADYLLVTVGRRPNTDGDLGLELANVKVGERGLVEVDAQCRTSN  307
             +V +  +V++KEE +  DY LV++GR+PNT G +GLE   V ++++G++ ++ +C+T+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIYAIGDIIAGPALAHKAMYEGRIAAEAISGQPSVIDYKCVPAVCFSDPECAAVGLSEK  367
             H+YAIGD  +G  LAHKA YE++IAAE ISGQ SVID++ +P V FSDPE A  GL+EK
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDKGYKTKVGKFPFAINGRAMSLNATEGFVKLVSDADTGLVLGAQIIGLEASNMIAEL  427
            EAK+KGY T  ++FPF  N+RA+S++ ++GFV++V++ +T  VLG Q++G E S++IAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIEMGATLEDIALTIHAHPTLGEIVLDAAEVALGHPIHTVAK  471
             +AIE GA  ED++LTIHAHPTL E +++AAE  +GH+ H + K
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

189) pdhD1 in NC_015391


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  355 bits (1335),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 215/460 (47%), Positives = 333/460 (73%), Gaps = 3/460 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAQMGQKVAIVEKEYIGGVCLNVGCIPSKALISAGHHYQDAL  69
            +D +VIG+G+GGYVAAIRAAQ+G+KV +V+K  +GGVCLN GCIPSKALISA+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSSVFGVT-AENVVLDFAKTQEWKNNKVVASLTKGVEGLLKKNKVEILRGEAYFNDEHTL  128
            +++  G+  + +V +D +    WK+  +V  LT G+  LLK N VE++ GEAY+ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMTETAAQTYSFKNAIVATGSRPIEIKGFKFG-KRVIDSTGGLALPEVPKKLVVVGGGY  187
            ++  E   Q +S+K+ I+A GS P+E+K+  F+ KR+I ST +L L EVP+ LVVVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGAYANLGAEVTILEFAPSILPTFEKDMVKLVTDNFKKKNVTIENNAMAKEAVET  247
            IG EL+ AYA++GA VTILE + +IL+  +  + K V  ++K   +T+  +A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  ENGVSVTYEVKGEEKTIEADYVMVTVGRRPNTDELGLESTGVEMNERGLVKVDAQGRTNV  307
             + V+V  +V G E  I+ DY +V++GR+PNT+ +GLE+ GV ++++G++K++ + +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KNIYAIGDITPGAALAHKASYEAKIAAEAISGKKVAIDYRAMPAVAFTDPELAVVGYTAA  367
             ++YAIGD + G  LAHKASYEAKIAAE ISG++  ID++AMP V F+DPE+A  G T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKEKGLDVKTSKFPLAGNGRALSLNATEGFVRLVTTKDEGVIVGAQIAGVSASDVIAEL  427
            EAKEKG +  +S+FP+ +N+RALS++ ++GFV++V+ K+   ++G Q+ G   S +IAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAVESGMVAEDIASTIHAHPSLAEVSMDAAELALGLPIH  467
             +A+E+G  AED++ TIHAHP+L+E  M+AAE  +G + H
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

190) LC40_0740 in NC_017465


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  354 bits (1330),  Expect = 6e-99, Method: Compositional matrix adjust.
 Identities = 218/461 (48%), Positives = 346/461 (76%), Gaps = 3/461 (0%)

Query  10   LDTIVIGSGPGGYVAAIHAAELGQKVAVIEKENTLGGVCLNVGCIPSKALIQVSENYRTA  69
            +D +VIG+G+GGYVAAI+AA+LG+KV +++K + LGGVCLN GCIPSKALI  SE  +  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHI  98

Query  70   LENEDEGIS-ASDVKLDWAKVQEFRAGVVNKMTNGVSYLFKKNKIDVIHGVAFLKTDHSL  128
             + +  G+  +++V++D + V   + G+VNK+T+G+  L+K N ++VI G A+L   H  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIDGENAQTYTFKHLIIATGSHPIEIPGFKFGG-RVIDSTGVlelkelpkelVIIGGGY  187
            ++   ++ Q +++K+LI+A GS P+E+ +  F+  R+I ST  L+L+E+P++LV++GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGAYARFGTHVTILEGTDSILNAYEKDLVKITEKKFKELGVTVITKAMAKEAKDT  247
            IG EL+ AYA+FG+ VTILEG+D+IL++ +  L K   + +KE+G+TVIT A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDAVEVSYEQDGKVNTIKADYVAVAVGRKPNTKDMGLEQVGIETTDRGLIKVDAQGRTNK  307
            GD V+V  + DGK + I+ DY  V++GRKPNT  +GLE++G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  EDIFAIGDIVAGAALAHKASYEGKIAAEAIAGQSSVVDYRAMPAVCYVDPEIATTGLTAA  367
            E+++AIGD  +G  LAHKASYE+KIAAE I+GQ+SV+D++AMP V + DPE+A TGLT  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEQGLDVKASRFPFSANGRATSKKATDGFVRLVSLKDSGVIVGAQIIGDSASDMISEL  427
            +AKE+G +  +SRFPF AN+RA S   +DGFV++V+ K++  ++G Q++G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLAIESGSTVEDIALTIHPHPSLSEAVMDAADVALGFPTNI  468
             +AIE+G+  ED++LTIH+HP+L+E++M+AA+  +G +T++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

191) LAF_1137 in NC_010610


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  354 bits (1330),  Expect = 6e-99, Method: Compositional matrix adjust.
 Identities = 218/461 (48%), Positives = 346/461 (76%), Gaps = 3/461 (0%)

Query  10   LDTIVIGSGPGGYVAAIHAAELGQKVAVIEKENTLGGVCLNVGCIPSKALIQVSENYRTA  69
            +D +VIG+G+GGYVAAI+AA+LG+KV +++K + LGGVCLN GCIPSKALI  SE  +  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHI  98

Query  70   LENEDEGIS-ASDVKLDWAKVQEFRAGVVNKMTNGVSYLFKKNKIDVIHGVAFLKTDHSL  128
             + +  G+  +++V++D + V   + G+VNK+T+G+  L+K N ++VI G A+L   H  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIDGENAQTYTFKHLIIATGSHPIEIPGFKFGG-RVIDSTGVlelkelpkelVIIGGGY  187
            ++   ++ Q +++K+LI+A GS P+E+ +  F+  R+I ST  L+L+E+P++LV++GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGAYARFGTHVTILEGTDSILNAYEKDLVKITEKKFKELGVTVITKAMAKEAKDT  247
            IG EL+ AYA+FG+ VTILEG+D+IL++ +  L K   + +KE+G+TVIT A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDAVEVSYEQDGKVNTIKADYVAVAVGRKPNTKDMGLEQVGIETTDRGLIKVDAQGRTNK  307
            GD V+V  + DGK + I+ DY  V++GRKPNT  +GLE++G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  EDIFAIGDIVAGAALAHKASYEGKIAAEAIAGQSSVVDYRAMPAVCYVDPEIATTGLTAA  367
            E+++AIGD  +G  LAHKASYE+KIAAE I+GQ+SV+D++AMP V + DPE+A TGLT  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEQGLDVKASRFPFSANGRATSKKATDGFVRLVSLKDSGVIVGAQIIGDSASDMISEL  427
            +AKE+G +  +SRFPF AN+RA S   +DGFV++V+ K++  ++G Q++G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLAIESGSTVEDIALTIHPHPSLSEAVMDAADVALGFPTNI  468
             +AIE+G+  ED++LTIH+HP+L+E++M+AA+  +G +T++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

192) HPL003_16435 in NC_016641


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  353 bits (1326),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 221/458 (49%), Positives = 335/458 (74%), Gaps = 14/458 (3%)

Query  7    VDTLVIGSGPGGYVAASRSSQLGMKTAIIERSQLGGVCTHVGCIPSKALIAEAHRYEVLR  66
            VD LVIG+G+GGYVAA R++QLG K  ++++++LGGVC + GCIPSKALI+ ++R   ++
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VK  96

Query  67   QLNQADAAASFVNAQA---------FKQGIVNKQAGGVGYLMKTAGVSILEGEASLVDEH  117
            ++++A++ +  V+++           K+GIVNK ++G+  L+K  GV ++ GEA L + H
Sbjct  97   HIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH  156

Query  118  TAIIKQNGAEQTISFKYAILATGSRPIELKAFPFGG-RILSSTEALSLPEAPTSLVVIGG  176
             A IK ++ EQ +S+K  ILA GS P+ELK+ PF+  RI+SSTEAL L E P  LVV+GG
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  177  GYIGVELGQMYAKFGTKVTILEGGGRILPGFEADLVAPVVKQLKTDGVNIVTGATAENVV  236
            GYIG+ELG  YAKFG+KVTILEG++ IL+G ++ L   V ++LK  G+ ++T+A  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  237  QNADTITLHYSKDQEQHHVTAEFVLVTVGRKPNTDGRLGLEHIGLPVTSRGLIETDEQCR  296
            + +D + +H   D  ++ +  ++ LV++GRKPNT G++GLE+IG+ +  +G+I  +++C+
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQ  335

Query  297  TAIPHIFAIGDITEGPALAHKASYeakiaaeaiagqaakVDYKAMPLVVFSEPELASVGL  356
            T I H++AIGD + G  LAHKASYEAKIAAE I+GQ + +D++AMP+V+FS+PE+A  GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  357  SETEAKEKALPIVIGRASFTINGRALALRAAEGYIKIVAKQDSGIVLGAQIVGVEASTLI  416
            +E EAKEK+   V +R +F  N+RAL++  A+G++++VA +++  VLG Q+VG E S+LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  417  SELALAIEMGATVEDLALTIHPHPTLGEVIMEAAENAV  454
            +E  +AIE GA  EDL+LTIH+HPTL E +MEAAE  +
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVM  493

193) LBFF_1254 in NC_021235


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  353 bits (1326),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 217/461 (48%), Positives = 346/461 (76%), Gaps = 3/461 (0%)

Query  10   LDTIVIGSGPGGYVAAIHAAELGQKVAVIEKENTLGGVCLNVGCIPSKALIQVSENYRTA  69
            +D +VIG+G+GGYVAAI+AA+LG+KV +++K + LGGVCLN GCIPSKALI  SE  +  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHI  98

Query  70   LENEDEGIS-ASDVKLDWAKVQEFRAGVVNKMTNGVSYLFKKNKIDVIHGVAFLKTDHSL  128
             + +  G+  +++V++D + V   + G+VNK+T+G+  L+K N ++VI G A+L   H  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIDGENAQTYTFKHLIIATGSHPIEIPGFKFGG-RVIDSTGVlelkelpkelVIIGGGY  187
            ++   ++ Q +++K+LI+A GS P+E+ +  F+  R+I ST  L+L+E+P++LV++GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGAYARFGTHVTILEGTDSILNAYEKDLVKITEKKFKELGVTVITKAMAKEAKDT  247
            IG EL+ AYA+FG+ VTILEG+D+IL++ +  L K   + +KE+G+TVIT A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDAVEVSYEQDGKVNTIKADYVAVAVGRKPNTKDMGLEQVGIETTDRGLIKVDAQGRTNK  307
            GD V+V  + DGK + I+ DY  V++GRKPNT  +GLE++G+   D+G+IK++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  EDIFAIGDIVAGAALAHKASYEGKIAAEAIAGQSSVVDYRAMPAVCYVDPEIATTGLTAA  367
            E+++AIGD  +G  LAHKASYE+KIAAE I+GQ+SV+D++AMP V + DPE+A TGLT  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  QAKEQGLDVKASKFPFSANGRATSKKATDGFVRLVSLKDSGVIVGAQIIGDSASDMISEL  427
            +AKE+G +  +S+FPF AN+RA S   +DGFV++V+ K++  ++G Q++G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLAIESGSTVEDIALTIHPHPSLSEAVMDAADVALGFPTNI  468
             +AIE+G+  ED++LTIH+HP+L+E++M+AA+  +G +T++
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

194) lpdA in NC_019425


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  351 bits (1320),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 219/461 (48%), Positives = 342/461 (75%), Gaps = 3/461 (0%)

Query  10   LDTVVIGSGPGGYVAAIRAAQMGQKVAIVEKEHIGGVCLNVGCIPSKALISAGHHYQDAM  69
            +D +VIG+G+GGYVAAIRAAQ+G+KV +V+K ++GGVCLN GCIPSKALISA+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HSEVFGVT-AENVVLDFAKTQEWKDNKVVKSLTSGVEMLLKKHKVEILRGEAFFVDEHDL  128
            H++  G+  + +V +D +    WKD  +V+ LT G+  LLK + VE++ GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVMTETNAQSYSFNNAIVATGSRPIEIKGFKFG-KRIIDSTGGLALKEVPKKLVVIGGGY  187
            ++  E + Q +S+++ I+A GS P+E+K+  F+ KRII ST +L L+EVP+ LVV+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGSELAGAYANLGAEVVILEGAPSILPNFEKDMVKYVTDNFKKKNVTIETSAMAKEAIET  247
            IG EL+ AYA++GA V ILEG+ +IL+  +  + K V  ++K   +T+ T A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  ADGVTVKYEVDGAEKSIDADYVMVTVGRRPNTDELGLEQAGVEVGERGLITVDAQGRTNK  307
            +D V V  +VDG E  I+ DY +V++GR+PNT+ +GLE+ GV ++++G+I ++ + +TN 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  SNIYAIGDIVPGLALAHKASYEAKIAAEAISGKKVAVDYKAMPAVCFTDPELASVGLTQA  367
             ++YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  GLT+ 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKAQGLDVKASKFPLQGNGRALSLNATEGFVRLVTTKEDNVLvgaqvagvgaSDIIAEL  427
            EAK +G +  +S+FP+Q+N+RALS++ ++GFV++V+ K+ + ++G Q+ G   S +IAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  GLALEAGMNAEDIALTIHAHPSLAETVMDAAELALGLPIHI  468
             +A+EAG NAED++LTIHAHP+L+E +M+AAE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

195) Pjdr2_1144 in NC_012914


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  350 bits (1313),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 210/464 (46%), Positives = 335/464 (73%), Gaps = 12/464 (2%)

Query  8    DVLVIGSGPGGYAAAVRSAQLGMKTIVVERGPIGGICTNVGCIPSKALIAEAHRY-HSRR  66
            D+LVIG+G+GGY AA+R+AQLG K ++V+++ +GG+C N GCIPSKALI+ ++R  H ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   LWSRSSSVDS-----FEEAQAFKEAVVNKQSGGVQYLLKSAGVTVLEGEASFIDEHTARI  121
              + +  V +       E    K+++VNK ++G++ LLK+ GV V+ GEA + + H A+I
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  122  TQLETEQAVAFKYAILATGSRPVELKAIPFG-SRVLSSTEALSLASIPESLIVIGGGYIG  180
               + EQ  ++K  ILA GS PVELK++PF+  R++SSTEAL L  +P+ L+V+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  181  VELGQMYAKFGSKVTILEGGQQVLPGFEADLVAPVMKQMNADGMTIVTEATAVRAEQDSE  240
            +ELG  YAKFG+KVTILEG++ +L+G ++ L   V ++++  G+T++T+A    +E+ ++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  241  GITLHYVGNDVRHSIRADYALVTVGRRPNTDGSLGLDRIGLRTTSKGLMGTDKQCRTEVP  300
             + +H   ++  + I+ DY LV++GR+PNT G +GL+ IG+    +G++  +++C+T++ 
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  301  HVFAIGDITEGPALAHKASYEAIVAAEAIAGLPTMIDYKVIPLVVFSGPELASVGLSETE  360
            HV+AIGD + G  LAHKASYEA +AAE I+G  ++ID++ +P+V+FS+PE+A  GL+E E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  361  CKAKAIPTIAGRSSFGINGRALAVRAPEGFVKVIAHAETGLIMGAQIVGAEASTLVSELS  420
             K K+  T+++R +F  N+RAL+V  ++GFV+V+A+ +T  ++G Q+VG+E S+L++E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  421  LAIEMGATVEDLALTIHPHPTLGEVIMEAAQ----NAVKRLAKK  460
            +AIE GA  EDL+LTIH+HPTL E +MEAA+    +A   L KK
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKK  503

196) A2cp1_2108 in NC_011891


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  349 bits (1311),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 216/466 (47%), Positives = 345/466 (75%), Gaps = 3/466 (0%)

Query  7    DAIVIGAGTGGYPAAIRLAQLGKKVALIEKDATLGGVCLNWGCIPSKALIAAANLVDEMR  66
            D +VIGAG+GGY AAIR AQLGKKV L++K A LGGVCLN+GCIPSKALI+A++ V +++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   GAADRGI-IAEPPRVDVAKLREFKDGVVKKLTGGVALLEKGNGVEVVRGTATVVAPNAVE  125
             A   G+ ++   +VD++ +   KDG+V+KLT+G+  L KGNGVEV+ G A +  ++   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VAGKDGQKTRLEAGAILVATGARPIEIPGFAFDGKDVWSAREAVDLPEVPKRLVCIGGGI  185
            +   D ++  +    +++A G+ P+E+ + +FD K + S+ EA++L EVP++LV +GGG 
Sbjct  160  IKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  186  IGMELGTVYAKLGAQVTFVEALPQVLTGVDPDAVRLVQKGLRQRGVAVHVNAKAKGYERR  245
            IG+ELGT YAK+GA+VT++E+   +L+G DP   + V++ L++ G++V  +A  +G E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  246  GKELVVKIEIEGKEQEIPCDKILVAVGFKPSSAGFGLEQVGVKIGPKGFIEVDQQYRTSV  305
            G E+ V ++++GKE+ I CD  LV++G KP+++ +GLE++GV ++ +GFI ++++ +T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  306  PTIFAAGDVTGPPLLAHKASKEGEIAAEVIAGHKTVRDWVGMPTAIFTDPEVAAVGLSEE  365
              ++A GD +G  LLAHKAS E+ IAAEVI+G+++V D  +MP  IF+DPEVA  GL+E 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  366  EARKQGYDPIVGKFAFGALGRAIAIHHTEGFVKVVGDRKTKLLLGASICGPEAGDLIAEA  425
            EA+ +GY+ + ++F+F A +RA+++ +++GFV+VV++++TK +LG  + GPE + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  426  ALALEMGAYLEDVALTIHAHPTLPEALNEACRAALGEAIHMLNRPE  471
             +A+E GA  ED++LTIHAHPTLPE+L EA  + +G+A HMLN+ +
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

197) Adeh_1822 in NC_007760


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 218/466 (47%), Positives = 342/466 (74%), Gaps = 3/466 (0%)

Query  7    DAIVIGAGTGGYPAAIRLAQLGKKVALVEKDATLGGVCLNWGCIPSKALIAAANLVDEMR  66
            D +VIGAG+GGY AAIR AQLGKKV LV+K A LGGVCLN+GCIPSKALI+A++ V +++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   GAADRGI-IAEPPRVDVAKLREFKDGVVKKLTGGVALLEKGNGVEVVRGTATVVGPTAVE  125
             A   G+ ++   +VD++ +   KDG+V+KLT+G+  L KGNGVEV+ G A +  +    
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VAGKDGQKTRLEAGAILVATGARPIEIPGFAFDGKDVWSAREAVDLPEVPKRLVCIGGGI  185
            +   D ++  +    +++A G+ P+E+ + +FD K + S+ EA++L EVP++LV +GGG 
Sbjct  160  IKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  186  IGMELGTVYAKLGAEVTFLEALPQVLTGVDPDAVRLVQKGLRQRGVAVHVNAKAKGYERR  245
            IG+ELGT YAK+GA VT+LE+   +L+G DP   + V++ L++ G++V  +A  +G E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  246  GKDLVVKVEIDGKEQEIACDKILVAVGFKPSSAGFGLEQVGVKIGPKGFIEVDPQYRTSV  305
            G ++ V V++DGKE+ I CD  LV++G KP+++ +GLE++GV ++ +GFI ++ + +T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  306  PTIFAAGDVTGPPLLAHKASKEGEIAAEVIAGHKTVRDWVGMPTAIFTDPEVAAVGLSEE  365
              ++A GD +G  LLAHKAS E+ IAAEVI+G+++V D  +MP  IF+DPEVA  GL+E 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  366  EARKQGYDPIVGKFAFGALGRAIAIHHTEGFVKVVGDRKTKLLLGASICGPEAGDLIAEA  425
            EA+ +GY+ + ++F+F A +RA+++ +++GFV+VV++++TK +LG  + GPE + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  426  ALALEMGAYLEDVALTIHAHPTLPEAFNEACRAALGEAIHMLNRPE  471
             +A+E GA  ED++LTIHAHPTLPE++ EA  + +G+A HMLN+ +
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

198) BBR47_30010 in NC_012491


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  347 bits (1304),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 209/456 (46%), Positives = 334/456 (74%), Gaps = 11/456 (2%)

Query  2    SELKR-IDTLVIGSGPGGYAAAVRSAQFGMTTVVVERGQIGGVCTNIGCIPSKSLIAEAH  60
            +E+K+ +D LVIG+G+GGY AA+R+AQ+G   V+V+++++GGVC N GCIPSK+LI+ ++
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE  93

Query  61   RYNLHSQWNHAVA-------SVSFEEAQAFKQAVVNKQSGGVHYLLRSAGVTILEGEASF  113
            R + H +  ++++        V   E    K+++VNK ++G++ LL++ GV ++ GEA +
Sbjct  94   RVK-HIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  114  IDQHTVVMKGPETEQLISFKYAILATGSRPIELQALPFGD-RILSSTEALSLSQLPASLV  172
             + H   +K  + EQ++S+K  ILA GS P+EL+++PF++ RI+SSTEAL L ++P  LV
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  173  VIGGGYIGVELGQMFAKFGTKVTILEGGEQVLPGFEADLTALVGRQLNTDGVTIITGAKA  232
            V+GGGYIG+ELG  +AKFG+KVTILEG++ +L+G ++ LT  V R+L+  G+T+IT+A  
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  233  VKAEQDTEGLTLHYLKNDEEHLVRTEYALVTVGRKPNTDGSLGLNRIGLPTTSRGLLETD  292
              +E+  + + +H   ++ E++++ +Y LV++GRKPNT G +GL+ IG+    +G++  +
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNT-GKIGLENIGVVLDDQGFIKIN  331

Query  293  EQCRTAIPHIFAIGDIANGPGLAHKASYEAKVAAEAIAGEPSAVDYKAIPLVVFSEPELA  352
            ++C+T I H++AIGD A G  LAHKASYEAK+AAE I+G+ S +D++A+P+V+FS+PE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  353  SVGLTETECKAKAVPVVVGKSSFSINGRALALKAAVGFVKVVADPVSGIVMGAQIVGAEA  412
              GLTE E K K+   V ++ +F  N+RAL++  A GFV+VVA+  +  V+G Q+VG+E 
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  413  STLISELALAIEMGATVEDLAMTIHPHPTMGEVIME  448
            S+LI+E  +AIE GA  EDL++TIH+HPT+ E +ME
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLME  487

199) pdhD in NC_013891


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1301),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITVGHRFKEANH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+ +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVSLDFTKAQEWKGSVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V +D      WK+++VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNIPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++NI +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagenaenDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+N+  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

200) AnaeK_2038 in NC_011145


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1301),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 215/466 (47%), Positives = 344/466 (74%), Gaps = 3/466 (0%)

Query  7    DAIVIGAGTGGYPAAIRLAQLGKTVALVEKDATLGGVCLNWGCIPSKALIAAANLVDEMR  66
            D +VIGAG+GGY AAIR AQLGK V LV+K A LGGVCLN+GCIPSKALI+A++ V +++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   GAADRGI-IAEPPRVDVAKLREFKDGVVKKLTGGVALLEKGNGVEVVRGTATVVAPNAVE  125
             A   G+ ++   +VD++ +   KDG+V+KLT+G+  L KGNGVEV+ G A +  ++   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VAGKDGQKTRLEAGAILVATGARPIEIPGFAFDGKDVWSAREAVDLPEVPKRLVCIGGGI  185
            +   D ++  +    +++A G+ P+E+ + +FD K + S+ EA++L EVP++LV +GGG 
Sbjct  160  IKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  186  IGMELGTVYAKLGAQVTFVEALPQVLTGVDPDAVRLVQKGLRQRGVAVHVNAKAKGYERR  245
            IG+ELGT YAK+GA+VT++E+   +L+G DP   + V++ L++ G++V  +A  +G E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  246  GKELVVKIEIEGKEQELPCDKILVAVGFKPSSAGFGLEQVGVKIGPKGFIEVDQQYRTSV  305
            G E+ V ++++GKE+ + CD  LV++G KP+++ +GLE++GV ++ +GFI ++++ +T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  306  PTIFAAGDVTGPPLLAHKASKEGEIAAEVIAGHKTVRDWVGMPTAIFTDPEVAAVGLSEE  365
              ++A GD +G  LLAHKAS E+ IAAEVI+G+++V D  +MP  IF+DPEVA  GL+E 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  366  EARKQGYDPIVGKFAFGALGRAIAIHHTEGFVKVVGDRKTKLLLGASICGPEAGDLIAEA  425
            EA+ +GY+ + ++F+F A +RA+++ +++GFV+VV++++TK +LG  + GPE + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  426  ALALEMGAYLEDVALTIHAHPTLPEALNEACRAALGEAIHMLNRPE  471
             +A+E GA  ED++LTIHAHPTLPE+L EA  + +G+A HMLN+ +
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

201) lin1047 in NC_003212


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1300),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

202) MUO_05550 in NC_017728


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

203) pdhD in NC_018584


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

204) PdhD in NC_012488


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

205) lpdA in NC_011660


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

206) LM220_05987 in NC_021830


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

207) LM1816_12542 in NC_021829


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

208) pdhD in NC_018642


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

209) BN418_1273 in NC_020557


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

210) pdhD in NC_017537


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

211) BN419_1270 in NC_020558


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

212) pdhD in NC_018587


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

213) pdhD in NC_017529


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

214) LMOf2365_1076 in NC_002973


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

215) pdhD in NC_018591


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

216) pdhD in NC_018590


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

217) pdhD in NC_018585


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

218) pdhD in NC_018586


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

219) M640_04225 in NC_021839


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

220) M644_10705 in NC_021827


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

221) M645_04765 in NC_021840


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

222) M637_07960 in NC_021824


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

223) M638_08045 in NC_021825


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

224) M643_15605 in NC_021826


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

225) M641_08535 in NC_021838


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1298),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 221/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHKASYeakiaaeaiagekaeNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G+++  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

226) lpd in NC_016052


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  346 bits (1299),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 202/460 (44%), Positives = 337/460 (74%), Gaps = 3/460 (0%)

Query  10   LDTVVVGSGPGGYVAAIRASQKGQKVAIIERENIGGVCLNVGCIPSKALIAAGHHYQDAK  69
            +D +V+G+G+GGYVAAIRA+Q G+KV ++++ ++GGVCLN GCIPSKALI+A+++ ++ K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSEAFGIK-TENATLDFSKTQEWKENQVVNKLTSGVKGLLKKNKVDVIEGEAFFVDENSL  128
            ++++ G+K + +  +D +    WK+  +VNKLT G++ LLK N V+VI GEA++ + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYTFNHAIVATGSRPIEIPGFKFGG-RVIDSTGGLALEQVPEKLVIIGGGV  187
            ++   D  Q +++++ I+A GS P+E+ +  F+  R+I ST +L L++VP+ LV++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGAELGSAYANLGSEVTILEGTPQILPTYEKDLVKLVENDFKKRDVNIITSAMAKEAIDN  247
            IG ELG+AYA++G+ VTILEG+  IL+  +  L K V  ++K  ++ +IT A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVNYEADGKQESVTADYVMVTVGRRPNTDEMGLEQAGVEIGDHGLLPVDNQGRTNV  307
            GD V V+ + DGK+E +  DY +V++GR+PNT+ +GLE+ GV ++D+G++ ++N+ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KSIFAIGDVVPGAALAHKASYEAKIAAEAISGEKVAVDYKAMPSVAFTDPEIVTVGMTIN  367
              ++AIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+   G+T +
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKEAGLDAKAYKFPFAGNGRALSLNKTEGFIRLVTTVEDDvivgaqiggvgaSDMVSEL  427
            EAKE G ++ + +FPF +N+RALS++ ++GF+++V+  +   ++G Q+ G   S +++E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDASELALGLPIH  467
             +AIE+G NAED++LTIH+HP+L E  M+A+E  +G + H
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

227) pdhD in NC_005363


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  345 bits (1294),  Expect = 5e-96, Method: Compositional matrix adjust.
 Identities = 213/465 (46%), Positives = 347/465 (75%), Gaps = 3/465 (0%)

Query  5    DVVVIGAGPGGYVAAIRSAQLGFKTAVIEREFLGGVCLNVGCIPSKAMITATHLLHKAQH  64
            D++VIGAG+GGYVAAIR+AQLG K  ++++  LGGVCLN GCIPSKA+I+A++ +   +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   NFKEMGLNIKGGIDVDMKQLVKWKQSVSDKMSGGVNQLLKGYGVTIIKGDAEFKSSKEIS  124
              + MGL++ G ++VDM ++VKWK+++ +K+++G+  LLKG GV +I G+A +  +    
Sbjct  101  A-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  VKSSAGTESVQAKYFVVATGSRPIEIPGFKFDEKDICSSTGALAFDTIPKRVAVIGGGYI  184
            +K     +    K +++A GS P+E+ +  FD+K I SST AL ++ +P+++ V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEISSYLRKLGTEVTVIEAQSALLAGVVDPDCAQIVTRKLTKAGVNVLYGAKAKGQKKV  244
            GLE+++   K+G+ VT++E+  ++L+G  DP  ++ V R L   G+ V+ +A  +G  + 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSG-TDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  KDGYEVTVEINGKDEVVKCDKILVTVGRRPNGDQANLKAAGIQVDERGFVKVDAQRRTNV  304
             D  +V V+++GK+E+++CD  LV++GR+PN ++  L   G+ +D++GF+K++ + +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  305  SNIFAIGDIAGQPMLAHKASHEGVLVAEVIAGHNRVYDAKTVPAVVFTDPEIaaagmtea  364
             +++AIGD AG  +LAHKAS E+ + AEVI+G+N V D +++P V+F+DPE+A +G+TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  365  eakakgHTDLLISKFPFAANGRAVSMMETDGFVKMIADKKTHVLLGVHIVGPEASNLISE  424
            EAK KG  + + S+FPF AN+RA+S+ ++DGFV+++A+K+T  +LGV++VGPE S+LI+E
Sbjct  399  EAKEKGY-ETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVLAIEMGARIEDLALSIHPHPTLGETMMEAAEATLGHAIHIIQK  469
            AV+AIE GA  EDL+L+IH+HPTL E +MEAAE+ +GHA H+++K
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

228) pdhD in NC_019567


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  344 bits (1290),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 214/465 (47%), Positives = 346/465 (75%), Gaps = 3/465 (0%)

Query  5    DVVVIGAGPGGYVAAIRSAQLGFKTAVIEREFLGGVCLNVGCIPSKAMITATHLLHKAQH  64
            D++VIGAG+GGYVAAIR+AQLG K  ++++  LGGVCLN GCIPSKA+I+A++ +   +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   NFKEMGLNIKGGIDVDMKQLVKWKQSVSDKMSGGVNQLLKGYGVTIIKGEAEFKTSKEIS  124
              + MGL++ G ++VDM ++VKWK+++ +K+++G+  LLKG GV +I GEA +  +    
Sbjct  101  A-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  VKSSAGTEAVQAKYFIVATGSRPIEIPGFKFDEKDICSSTGALAFDTIPKRVAVIGGGYI  184
            +K     +    K +I+A GS P+E+ +  FD+K I SST AL ++ +P+++ V+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEISSYLRKLGTEVTVIEAQTALLAGVVDPDCAQIVTRKLTKAGVNVLYGAKAKGQKKV  244
            GLE+++   K+G+ VT++E+  ++L+G  DP  ++ V R L   G+ V+ +A  +G  + 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSG-TDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  KDGYEVTVEINGKDEVVKCDKILVTVGRRPNGDQANLKAAGIAVDERGFVKVDAQRRTNV  304
             D  +V V+++GK+E+++CD  LV++GR+PN ++  L   G+ +D++GF+K++ + +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  305  SNIFAIGDICGQPMLAHKASHEGVLVAEVIAGHNRVYDAKTVPAVVFTDPEIaaagmtea  364
             +++AIGD  G  +LAHKAS E+ + AEVI+G+N V D +++P V+F+DPE+A +G+TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  365  eakakgHTDLLISKFPFAANGRAVSMMETDGFVKMIADKKTHVLLGVHIVGPEASNLISE  424
            EAK KG  + + S+FPF AN+RA+S+ ++DGFV+++A+K+T  +LGV++VGPE S+LI+E
Sbjct  399  EAKEKGY-ETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVLAIEMGARIEDLALSIHPHPTLGETMMEAAEATLGHAIHIIQK  469
            AV+AIE GA  EDL+L+IH+HPTL E +MEAAE+ +GHA H+++K
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

229) Anae109_1998 in NC_009675


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  344 bits (1293),  Expect = 6e-96, Method: Compositional matrix adjust.
 Identities = 228/468 (49%), Positives = 341/468 (73%), Gaps = 3/468 (0%)

Query  4    KTF-DAVVIGAGVGGYPAAIRLAQLGKKVALVEKETLGGVCLNWGCIPSKALIAAANLVD  62
            K + D +VIGAG GGY AAIR AQLGKKV LV+K  LGGVCLN+GCIPSKALI+A++ V 
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   EIKGAAERGI-VSGEPKVDVAKLREFKNGVVKKLTSGVGLLEKGNGVEVVKGTATFVSAT  121
            +IK A   G+ VSGE +VD++ +   K+G+V+KLT G+  L KGNGVEV+ G A +  A 
Sbjct  97   HIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH  156

Query  122  AIDVEQNGERTRIEAQAFIVATGGRPVEIPGFAFDGKDVWSAKEAVDLPEVPKRLVCIGG  181
               +  ++E   +  + +I+A G+ PVE+ + +FD K + S+ EA++L EVP++LV +GG
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  182  GIIGMELGTVYAKLGAQVTFLEALPQILTGVDPEAVRFVQKNLRQRGVTVHVNakakgfe  241
            G IG+ELGT YAK+GA+VT+LE+   IL+G DP   + V+++L++ G+TV  +A  +G E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  242  kkggalaVKAEVDGKETTIECDKILVAVGFRPSPEGLGLEKIGVKIAPKG-IEVDAQYRT  300
            + G+ + V  +VDGKE  I+CD  LV++G +P+   +GLE+IGV +  +G I ++ + +T
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  301  SVPSVFAIGDVTGGPFLAHKASKEGEIAAEVIAGMKSARDWVAMPGGIFTDPEIGTVGLS  360
            ++  V+AIGD +GG +LAHKAS E+ IAAEVI+G +S  D  AMP  IF+DPE++  GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  361  EEEARALGHDPITGKFAFGALGRAIAIDHTDGFVKVIADRASKLILGVTVVGPEAADLIA  420
            E EA+  G + ++++F+F A +RA+++ ++DGFV+V+A++ +K +LGV +VGPE + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  421  EATLALEMGAYLEDVALTIHAHPTLPEAFMEACKVALGEPIHMLKPPE  468
            EA +A+E GA  ED++LTIHAHPTLPE++MEA    +G++ HML+  +
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

230) BTF1_10495 in NC_018508


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  344 bits (1292),  Expect = 7e-96, Method: Compositional matrix adjust.
 Identities = 208/454 (46%), Positives = 330/454 (73%), Gaps = 2/454 (0%)

Query  4    IETIVIGSGPGGYVAAIRAAQLGQQVAIIERENLGGVCANVGCIPSKALISVGHRFEEAK  63
            ++ +VIG+G+GGYVAAIRAAQLG++V ++++ +LGGVC N GCIPSKALIS ++R  + K
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   YSEDMGI-FSSVVNVDFAKVQEFKNGVVKKLVDGVEGLLNSNKVDVIKGEAYFIDANTIC  122
             ++ MG+  S+ V+VD + V   K+G+V+KL DG+  LL++N V+VI GEAY+ +A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  123  VSNKNAVQTYTFKNAIIATGSRPVEIPPFEFT-KRVINSTGALNLAEVPSKLVVIGGGYI  181
            +   +  Q +++K+ I+A GS PVE+ +  F  KR+I+ST AL+L EVP+ LVV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  182  GTELGSAYASLGSLVTIIEGGKDILTGFDKQMTQILKENLINKGVKIVVDASAKGVEEVE  241
            G ELG+AYA +G+ VTI+EG+  IL+G D  +T+ +K +L + G+ ++ DA  +G E+  
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  242  NGVIVTYEIGGEEKKVDADYVLITVGRRPNTENMGFEKIGIEFSNRGLLKIDQQCRTNLP  301
            + V V  +++G E  ++ DY L+++GR+PNT ++G+E+IG+ + ++G++KI+++C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  302  NIFAIGDIVAGPQLAHKAFYEGKVAAEAIAGEFSFVDYLAIPAVCFTTPELATVGYTEEQ  361
            +++AIGD  +G  LAHKA YE+K+AAE I+G+ S +D+ A+P V F+ PE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  362  AKAEDMEVKVVKFPFSANVHAMVSNEEKGFLRLLARKEDGILVGAQIAGNGASEIIAEMG  421
            AK  + E    +FPF AN +A+  ++  GF++++A K+   ++G Q+ G   S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  422  LAIEAGMTVEDIALTPHAHPTLSESLMKAAETLI  455
            +AIEAG   ED++LT HAHPTL+E+LM AAE ++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVM  493

231) Eab7_1857 in NC_018665


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  342 bits (1284),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 226/462 (49%), Positives = 345/462 (75%), Gaps = 3/462 (0%)

Query  11   DLLVIGAGPGGYVAAIRGAQLGLKVTVVERENVGGVCLNVGCIPSKALITAGHNFQHAKG  70
            DLLVIGAG+GGYVAAIR+AQLG KV +V++ ++GGVCLN GCIPSKALI+A++  +H K 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDSMGIT-SENVAVDFSKVQSWKQSvvnkltggvggllkgnnvETVVGEAYFQSEDTVRI  129
            +++MG+  S +V VD + V  WK+++VNKLT+G+  LLKGN VE + GEAY+   +  +I
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  INEDSSTPYKFKKCIIATGSTPIELPAFKWS-KRVLSSTGALNLPELPKKLIVIGGGYIG  188
              ED    + +K  I+A GS P+EL +     KR++SST AL+L E+P+ L+V+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  MELGTAYANFDTEVVILEGTKDILSGFEPAMTQVVKKKLKQKGNITIHNEALAQSVEETE  248
            +ELGTAYA+F++ V ILEG+  ILSG +P +T+ VK+ LK+ G IT+  +AL Q+ E+T 
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  EGVKVTFEVKGETQTVEADYVLVTVGRRPNTSDLGLEMAEVKVSERGLVEIDDQCRTSNE  308
            + V+V  +V G  + ++ DY LV++GR+PNT+ +GLE   V + ++G++ I+++C+T+ E
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIVPGPPLAHKasfeakiaaeaaaghpaYLDYSAIPAVVFTDPELATVGYTEAQ  368
            ++YAIGD   G  LAHKAS+EAKIAAE  +G+ + +D+ A+P V+F+DPE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDYLASKFPYAANGRALALNEPDGFLKMITRKSDNLLIGAQIAGTGASDMIAEMG  428
            AKE G + ++S+FP+ AN+RAL+++++DGF+++++ K+ + ++G Q+ G   S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIESGMTAEDIALTIHAHPSLGEIAMETAEVAIGSPIHIIK  470
            +AIE+G  AED++LTIHAHP+L E  ME+AE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

232) Exig_2008 in NC_010556


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  342 bits (1283),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 226/462 (49%), Positives = 343/462 (75%), Gaps = 3/462 (0%)

Query  11   DLLVIGAGPGGYVAAIRGAQLGLKVTIVERENVGGVCLNVGCIPSKALITAGHNFQHAKG  70
            DLLVIGAG+GGYVAAIR+AQLG KV +V++ ++GGVCLN GCIPSKALI+A++  +H K 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDSMGIT-SENVAVDFSKVQSWKQSvvnkltggvggllkgnnvETVVGEAYFQSEDTVRI  129
            +++MG+  S +V VD + V  WK+++VNKLT+G+  LLKGN VE + GEAY+   +  +I
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  INEDSSTPYKFKKCIIATGSTPIELPAFKWS-KRVLSSTGALNLPELPKKLIVIGGGYIG  188
              ED    + +K  I+A GS P+EL +     KR++SST AL+L E+P+ L+V+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  MELGTAYANFDTEVVILEGTKDILSGFEPAMTQVVKKKLKQKGNITIHNEALAQSVEETE  248
            +ELGTAYA+F++ V ILEG+  ILSG +P +T+ VK+ LK+ G IT+  +AL Q+ E+T 
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  EGVKVTFEVKGETQTVEADYVLVTVGRRPNTSDLGLEMAEVKVSERGLVEIDDQCRTSNE  308
            + V+V  +V G  + ++ DY LV++GR+PNT+ +GLE   V + ++G++ I+++C+T+ E
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIVPGPPLAHKasfeakiaaeaaaghpaYLDYSAIPAVVFTDPELATVGYTEAQ  368
            ++YAIGD   G  LAHKAS+EAKIAAE  +G+ + +D+ A+P V+F+DPE+A  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLDYIASKFPYAANGRALALNEPDGFLKMITRKADGLLIGAQIAGTGASDMIAEMG  428
            AKE G + ++S+FP+ AN+RAL+++++DGF+++++ K    ++G Q+ G   S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIESGMTAEDIALTIHAHPSLGEIAMETAEVAIGSPIHIMK  470
            +AIE+G  AED++LTIHAHP+L E  ME+AE  +G + H+++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

233) Theco_1716 in NC_019897


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 219/436 (51%), Positives = 320/436 (74%), Gaps = 3/436 (0%)

Query  38   VDKQYVGGVCLNVGCIPSKALISAAHQYEAVKHAAQFGIE-AGEPSVNWAKVQEHKNSVV  96
            VDK  +GGVCLN GCIPSKALISA+++   +KHA   G+  +GE  V+ + V   K+++V
Sbjct  68   VDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIV  127

Query  97   SKMTGGVGALLKGNKVQFFSGEVMFINEHEARVFNEQESPRYRFKHCIIATGSRPIELKA  156
            +K+T+G+ +LLKGN V+ +SGE  + + H A++  E+E   + +K+ I+A GS P+ELK+
Sbjct  128  NKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKS  187

Query  157  FPFGG-RILSSTEALSLPERPQSLVVIGGGYIGIELGQMYAKFGTKVTVIEGADTILPGF  215
             PF+  RI+SSTEAL L E P+ LVV+GGGYIG+ELG  YAKFG+KVT++EG+DTIL+G 
Sbjct  188  MPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGT  247

Query  216  DPEMSRLVAKKLASSNVDVYTGAQAQSAEQTDKDVTVTFTVGGEEKKVTADYLLVTVGRR  275
            DP +++ V + L    + V T+A  Q++E+T+ +V V   V+G E  +  DY LV++GR+
Sbjct  248  DPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRK  307

Query  276  PNTDGELGLDLIGIKLTDRGLVEVDDQCRTNIPHIYAIGDIVPGPALAHKATYEAKVAAD  335
            PNT G +GL+ IG+ L D+G++ ++++C+TNI H+YAIGD   G  LAHKA+YEAK+AA+
Sbjct  308  PNT-GKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAE  366

Query  336  AIAGLPSKVDYRCIPAVCFSDPECASVGLTDAEAKAQGYKTKVGRFSYGANGRAVSLGAA  395
             I+G  S +D++ +P V FSDPE A  GLT+ EAK +GY T  +RF++ AN+RA+S++ A
Sbjct  367  VISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDA  426

Query  396  EGFVKLVADAETGLLLGAQVAGHEASNLIAEMGLAIEMGATLEDVALTIHAHPTLGEMVM  455
            +GFV++VA+ +T  +LG Q+ G E S+LIAE  +AIE GA  ED++LTIHAHPTL E +M
Sbjct  427  DGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLM  486

Query  456  EAAEVALGHPIHAIVR  471
            EAAE  +GH+ H + +
Sbjct  487  EAAEGVMGHATHMLNK  502

234) pdhD2 in NC_015391


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 204/461 (45%), Positives = 334/461 (73%), Gaps = 6/461 (1%)

Query  7    ETIIIGAGPGGYVAAIRAAQLGQKVTIIEKEYIGGVCLNVGCIPSKALITAGHHFHNAQH  66
            + ++IGAG+GGYVAAIRAAQLG+KV +++K  +GGVCLN GCIPSKALI+A+++  + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   SEVFGIT-TSNVTLDITKMQNWKDTKVVSMLTRGVEGLLKKNKVEIIRGTAVFTDKNHLT  125
            ++  G+  +++V +D+  + +WKD  +V+ LT G+  LLK N VE+I G A +T+ +   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VETKDGSQDFEFKNVVIATGSSPLAVPEVPFGG-RIVDTTGGLNIKELPKRLVIVGGGYV  184
            +   D  Q F +K++++A GS P+ +  +PF+  RI+ +T +L+++E+P++LV+VGGGY+
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  ATQLAFAFNNFGSKVTILEKEDSIINFFDKDMVKLVKKSYADKGVDVIEGVNITKSSQTN  244
            + +L+ A+ +FG+KVTILE  D+I++  D  + K VK+   + G+ VI +  +  + +T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  245  DVVTVTYEKDGKEEMIESDYVLVSAGRVPNTSKLNLEAVGVKLLENGRIDVDDSLRTGVE  304
            D V V  + DGKEE+I+ DY LVS GR PNT+K+ LE +GV L ++G I +++  +T +E
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  305  GVYAIGDITPGPAFAHKASHDAKIVAEVISGKEVVVNYKTMPIAAYTEPEIATVGLSADE  364
             VYAIGD + G  +AHKAS +AKI AEVISG++ V+++++MP+  +++PE+A  GL+  E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  365  VKGNKEYKV--SKFSLAGNGRALSLDAAEGFVRMITEEKTNKIVGAQVIGVSAGDVIAEL  422
             K +K Y    S+F++ +N+RALS+  A+GFV++++E +T++++G Q++G   + +IAE 
Sbjct  400  AK-EKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  423  ALAIELGMVAEDISLTIHAHPSLAESVMDTAELALGLPIHM  463
             +AIE G  AED+SLTIHAHP+L+E++M++AE  +G + HM
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

235) Desti_1340 in NC_018025


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 204/462 (45%), Positives = 335/462 (73%), Gaps = 2/462 (0%)

Query  14   IIGAGPGGYVAAIRAAQLGLEVTLVEKGLLGGVCLNWGCIPSKALIYVADLKNRIEQADK  73
            +IGAG+GGYVAAIRAAQLG  V LV+K+ LGGVCLN+GCIPSKALI  ++  ++I +A+ 
Sbjct  44   VIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANT  103

Query  74   IGLIVR-DVSIDLPKLVQWKSDVVEKLRKGVASLMSQHKIEVVTGTAHFTGENSFSVETS  132
            +GL V  +V +D+P +V+WK ++V+KL  G+ +L+  + +EV++G A +T  +   +   
Sbjct  104  MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIE  163

Query  133  DGVRRFEFRNCILATGSSAAELPGMPRDGELVIDSTDALDPKNIPERFVVIGAGSVGLEM  192
            D  + F +++ ILA GS + EL +MP D   +I ST+AL+ +++P+++VV+G+G +GLE+
Sbjct  164  DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLEL  223

Query  193  GTFYAKLGSKVTILDAVDRLLPMLDPDIGRAMERALKHLKIDLILKAKIQGLKRENGTGV  252
            GT YAK+G+KVTIL++ D +L+  DP + +++ R LK++ I +I  A +QG     +   
Sbjct  224  GTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVN  283

Query  253  LQYSASDGDKSITGDKILVAIGRRPNTSGIGLEKVKVKLDSKGFVQVSETMQTSVPGIYA  312
            ++    + +  I  D  LV+IGR+PNT+ IGLE++ V LD +GF+++++  QT++  +YA
Sbjct  284  VHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYA  343

Query  313  IGDIVSGPMLAHKASFQGKIAAEVIAGEPAAFSGVEVPGVIFSDPEIATVGLSEQDALAQ  372
            IGD  +G +LAHKAS+++KIAAEVI+G+ + +    +P VIFSDPE+A  GL+E++A  +
Sbjct  344  IGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEK  403

Query  373  GIPVKAGVFPFRAMGRTLTMAEEGPGFVKIVSDAESETVLGVHIVGPHASDLIAEGCLAV  432
            G    ++ FPF+A +R+L++++ + GFV++V++ ++  VLGV++VGP+ S LIAE+ +A+
Sbjct  404  GYETVSSRFPFQANARALSVSDAD-GFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAI  462

Query  433  ASASHVDDLTLTIHPHPTLPETIEEAAEQVENKAIHIFSAKK  474
             ++++ +DL+LTIH+HPTLPE + EAAE V   A H+++ K+
Sbjct  463  EAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

236) Htur_3594 in NC_013743


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 211/483 (44%), Positives = 344/483 (72%), Gaps = 26/483 (5%)

Query  13   LIIGAGPAGYVAAIRAGQLDLDVTLVEKEAYGGTCLNHGCIPSKALITATDIAHDARNAE  72
            L+IGAG++GYVAAIRA+QL+  V LV+K   GG CLN+GCIPSKALI+A++   + ++A+
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN  102

Query  73   AMGIH--ADPAIDLAGMVDWKDGVVDQLTSGVEKLCKANQVNLLEGTATFTDEHTARVSH  130
            +MG+   ++  +D++ +V WKDG+V++LT G+  L K+N V+++ G A +T+ H A++  
Sbjct  103  TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI  162

Query  131  SGEGQGSETLEFEHAVVATGSRPIEIPNFEFGDEPVLNSRQALALDSVPDSLVVVGAGYI  190
             +E Q    + + + ++A GS P+E+ +  F++  +++S +AL L+ VP+ LVVVG+GYI
Sbjct  163  EDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  191  GMELASVFAKLGTDVTVIEMLDSILPGYDDDLKRPVKQRANDLGIEFEFGYTASEWHERA  250
            G+EL++ +AK+G+ VT++E  D+IL+G D  L + VK++ +++GI               
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGI---------------  264

Query  251  DGEGITVAADPVEETAADGGSAEAIEDETGESLEL-DAEKVLVAVGREPVSDTLDLEAAG  309
                 TV +D++ + + + G    ++ + +   E+ + +  LV++GR P ++ ++LE  G
Sbjct  265  -----TVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIG  319

Query  310  VETDDRGFIETDSRARTNVDHVFAVGDVAGEPMLAHKGSAEGQVAAEVIAGEPAAIDYQA  369
            V  DD+GFI  +++ +TN++HV+A+GD AG  +LAHK+S E+++AAEVI+G+ + ID+QA
Sbjct  320  VVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQA  379

Query  370  MPAVVFTDPEIATVGMTESEAEENGFDTVVGQFPFRASGRALTTGESDGFVKVVAEEEDG  429
            MP V+F+DPE+A  G+TE EA E+G++TV ++FPF+A++RAL+ +++DGFV+VVAE +  
Sbjct  380  MPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTK  439

Query  430  YVLGASIVGPeaseliaelglaielgatleDVASTVHAHPTLSESVMEAAENALGHAIHT  489
             VLG  +VGPE S LIAE  +AIE GA  ED++ T+HAHPTL+E++MEAAE  +GHA H 
Sbjct  440  RVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

Query  490  LNR  492
            LN+
Sbjct  500  LNK  502

237) Lbuc_0739 in NC_015428


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 205/469 (44%), Positives = 338/469 (73%), Gaps = 12/469 (2%)

Query  8    ETVIIGAGPGGYVAAIRASELGQKVTLIEKSDTLGGVCLNVGCVPSKALIAAGHRLQEAN  67
            + ++IGAG+GGYVAAIRA++LG+KV L++K++ LGGVCLN GC+PSKALI+A++R+++ +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   DASTYGITTQPAT-IDFAKTQEWKQKKVVDRMTSGVKMLLNKHKVEIIHGEAVLDSDTQL  126
            +A+T G+       +D +    WK+  +V+++T G++ LL+ + VE+I GEA L      
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  127  RVMPTGPQQFMSADTGTTIQFDNLIIASGSHPIEIPGFKFDG-RVIDSTGGLNLPEIPKE  185
            ++   + +Q+ S        + +LI+A GS P+E+ +  FD  R+I ST +L+L E+P++
Sbjct  159  KIKIEDEEQIFS--------YKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  186  FVVIGGGYVGTELAGAYANLGAHVTIIEGLDSILNGFTKDMVSLVVKNLKKKGVDIHTSA  245
            +VV+GGGY+G EL+ AYA++GA VTI+EG D+IL+G    +   V ++LK  G+ + T A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  246  KAISSSQDDNSVSVTYEEDGKQTTIKADYCMVTVGRRPNTDDLGLEYTKVKLDDHGIVQT  305
               ++ + ++ V+V  + DGK+  I+ DYC+V++GR+PNT+ +GLE   V LDD+G+++ 
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  306  DIQGRTDSEHIFAIGDIASGPALAHKAFFQGKVAAGAISGKNTANDYVGVPAVCFSDPEI  365
            + + +T+ EH++AIGD A+G  LAHKA +++K+AA  ISG+N+  D+ ++P V FSDPE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  366  AVVGMTQAQAKDKNIEVSTSKFPFAGNARAVSLDEADGFVRLIFTKDDKTIVGGEIVGPG  425
            A  G+T+ +AK+K  E  +S+FPF +NARA+S+ +ADGFV+++  K+ K ++G ++VGP 
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  426  ASDLVAELSLAVNSHMNVEDIALTIHPHPTLSEPVQEAADVGLGFPTHI  474
             S L+AE  +A+++  N ED++LTIH+HPTL+EP+ EAA+  +G +TH+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

238) pdhD in NC_018610


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 204/469 (44%), Positives = 338/469 (73%), Gaps = 12/469 (2%)

Query  8    ETVIIGAGPGGYVAAIRASELGQKVTLIEKSDTLGGVCLNVGCVPSKALIAAGHRLQEAN  67
            + ++IGAG+GGYVAAIRA++LG+KV L++K++ LGGVCLN GC+PSKALI+A++R+++ +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   DASTYGITTQPAT-IDFAKTQEWKQKKVVDRMTSGVKMLLNKHKVEIIHGEAVLDSDTQL  126
            +A+T G+       +D +    WK+  +V+++T G++ LL+ + VE+I GEA L      
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  127  RVMPTGPQQFMSADTGTTIQFDNLIIASGSHPIEIPGFKFDG-RVIDSTGGLNLPEIPKE  185
            ++   + +Q+ S        + +LI+A GS P+E+ +  FD  R+I ST +L+L E+P++
Sbjct  159  KIKIEDEEQIFS--------YKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  186  FVVIGGGYVGTELAGAYANLGAHVTIIEGLDSILNGFTKDMVSLVVKNLKKKGVDIHTSA  245
            +VV+GGGY+G EL+ AYA++GA VTI+EG D+IL+G    +   V ++LK  G+ + T A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  246  KAISSSQDDNSVSVTYEEEGKQTTIKADYCMVTVGRRPNTDDLGLEYTKVKLDDHGIVQT  305
               ++ + ++ V+V  + +GK+  I+ DYC+V++GR+PNT+ +GLE   V LDD+G+++ 
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  306  DIQGRTDSEHIFAIGDIASGPALAHKAFFQGKVAAGAISGKNTANDYVGVPAVCFSDPEI  365
            + + +T+ EH++AIGD A+G  LAHKA +++K+AA  ISG+N+  D+ ++P V FSDPE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  366  AVVGMTQAQAKDKNIEVSTSKFPFAGNARAVSLDEADGFVRLIFTKDDKTIVGGEIVGPG  425
            A  G+T+ +AK+K  E  +S+FPF +NARA+S+ +ADGFV+++  K+ K ++G ++VGP 
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  426  ASDLVAELSLAVNSHMNVEDIALTIHPHPTLSEPVQEAADVGLGFPTHI  474
             S L+AE  +A+++  N ED++LTIH+HPTL+EP+ EAA+  +G +TH+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

239) EAT1b_2788 in NC_012673


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1263),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 228/442 (52%), Positives = 333/442 (76%), Gaps = 3/442 (0%)

Query  11   DLLVIGAGPGGYVAAIRGAQLGMKVTIVEKGNFGGVCLNVGCIPSKALITAGHNFQHAKG  70
            DLLVIGAG+GGYVAAIR+AQLG KV +V+K+++GGVCLN GCIPSKALI+A++  +H K 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   HDSMGIT-SDNVSVDFTKVQDWKQSvvnkltggvkgllkgnkIEIVQGEAFFASEDTVRV  129
             ++MG+  S++V VD   V  WK+++VNKLT+G++ LLKGN +E++ GEA+++  +  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  ITEDSSTPYKFKKAIVATGSTPIEIPSFKWS-KRVLSSTGALALPEVPKKLVVIGGGYIG  188
              ED    + +K  I+A GS P+E+ S     KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  MELGTAYANFDTEVVVVEGASDILSGFEPQMTQIVKKKLKQKGNVTIHTNALAKGVEETE  248
            +ELGTAYA+F++ V ++EG+  ILSG +P +T+ VK+ LK+ G +T+ T+AL +G E+T 
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG-ITVITDALVQGGENTG  279

Query  249  DGVTVKFEVNGEEQSVEADYVLVTVGRRPNTGDIGLENADVKISDRGIIEIDDQCKTSNE  308
            D V V  +V+G E+ ++ DY LV++GR+PNTG IGLEN +V + D+G+I I+++C+T+ E
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  NIYAIGDIVPGPPLAHkasyeakiaaeaaagkpaYLDYSAIPAVVFTDPELATVGYTEPL  368
            ++YAIGD   G  LAHKASYEAKIAAE  +G+ + +D+ A+P V+F+DPE+A  G TE  
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKEEGLEITVSKFPFAANGRALALDEPDGFMKLITRKEDGLLIGAQIAGTGASDMIAELG  428
            AKE G E   S+FPF AN+RAL++ ++DGF+++++ K+   ++G Q+ G   S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAIEAGMTAEDIALTIHAHPSL  450
            +AIEAG  AED++LTIHAHP+L
Sbjct  460  FAIEAGANAEDLSLTIHAHPTL  481

240) pdhD in NC_013768


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

241) LMRG_00517 in NC_017544


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

242) PdhD in NC_003210


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

243) LMLG_2332 in NC_017547


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

244) LMKG_01867 in NC_017546


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

245) LMOG_00665 in NC_017545


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

246) pdhD in NC_018588


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

247) pdhD in NC_018589


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

248) pdhD in NC_018592


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

249) pdhD in NC_018593


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

250) M642_02945 in NC_021823


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

251) M639_12365 in NC_021837


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

252) pdhD in NC_013766


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

253) pdhD in NC_008555


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+  H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V++D      WK+G+VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++N+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

254) PdhD in NC_016011


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  337 bits (1265),  Expect = 9e-94, Method: Compositional matrix adjust.
 Identities = 222/459 (49%), Positives = 343/459 (75%), Gaps = 2/459 (0%)

Query  11   DTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITVGHRFKEANH  70
            D +VIGAG+GGYVAAIRAAQLG+KV +++K   GGVCLN GCIPSKALI+ ++R K+ +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SDNMGIT-ADNVSLDFTKAQEWKGSVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRV  129
            ++ MG+  +++V +D      WK+++VNKLT G++ LLK N VE++ GEA++ + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  IHPDSAQTYTFNNVIIATGSRPIEIPGFKYG-KRVLSSTGALALTEVPKKLVVIgggyig  188
               D  Q ++++++I+A GS P+E+ +  ++ KR++SST AL L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  189  telggAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALAKSAEETEN  248
             ELG A+A++G+ +TILEG+  IL+  +  +   VKR+LK   + ++T AL +++E+T +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  249  GVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNIPN  308
             V+V  + +G    I+ DY LV++GR+PNT+ IGLE+ GV + ++G++ ++++ ++NI +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  309  IFAIGDIVPGVPLAHkasyeakiaaeaiagekseNDYTALPAVVFSDPELATVGLTEKEA  368
            ++AIGD   G  LAHKASYEAKIAAE I+G++S  D+ A+P V+FSDPE+A  GLTEKEA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  369  KEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGL  428
            KEKG++  +++FPF +N+RALS+  ++GFV++V+ K+   V+G Q+ G + S +I+E  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  429  AIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM  467
            AIE+G  AED++LTIHAHP+L E  MEAAE  +G++ HM
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

255) STH414 in NC_006177


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  336 bits (1261),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 216/472 (46%), Positives = 345/472 (74%), Gaps = 5/472 (1%)

Query  2    GSIKTGTDVVVIGAGPGGYVAAQRASQLGLDVTLIEREELGGTCLNHGCIPSKALISVGD  61
            G +K   D++VIGAG+GGYVAA RA+QLG  V L+++ ELGG CLN+GCIPSKALIS ++
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE  93

Query  62   LLYKVNNAAERGLVVKGSVEVDFAKTQEWKETKVIKRLTSGVASLMKAGQVEVVKGTARF  121
             +  +++A   GL V G V+VD +    WK+  ++++LT G+ +L+K+  VEV+ G A +
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  122  TDPHSLEVELNDGGTAAYTFKHAIIATGSTAVNPSFFPLDGENVVDARGALAFREIPPRF  181
            T++H   + ++D     +++K+ I+A GS +V+    P+D   ++ +  AL ++E+P ++
Sbjct  153  TEAHIAKIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  182  VVVGGGYIGVELGIAYAKLGSKVTIVEATGQLLPGTDPDlvnvlmrrlrrlgvtvmlNAR  241
            VVVGGGYIG+ELG AYAK+G+KVTI+E+++ +L+GTDP L + + R+L+ +G+TV+ +A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  242  ASGGLQNGK-VKVQ-DGEGKVHEIEADKVLVSVGRVPYTEGLHLDKAGVRVDEKGFIPVD  299
              GG + G  V+V+ + +GK + I+ D  LVS+GR P T  + L++ GV +D++GFI ++
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  300  EQMRTNVPHIYAIGDVCSPVMLAHKASAQGRVAAEAIAGRPSAADWQTVPAVIFTDPEIA  359
            ++ +TN+ H+YAIGD  +  +LAHKAS ++++AAE I+G+ S  D Q++P VIF+DPE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  360  YVGLTEAQAREKGYDPVVSRYNFAAVGRALTMGESDGMVKLVGDRQSGLLLGAQMVGPEV  419
            Y GLTE +A+EKGY+ V SR+ F A +RAL+++++DG V++V+++++  +LG QMVGPEV
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  420  SELIGEIALAIEMGAQMEDVALTPHYHPTLSEGILEAALSWM-HSIEKAGRK  470
            S LI+E  +AIE GA+ ED++LT H HPTL+E ++EAA + M H+ +   +K
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKK  503

256) SSIL_3151 in NC_018065


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  334 bits (1252),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 220/463 (48%), Positives = 347/463 (75%), Gaps = 2/463 (0%)

Query  10   LDTLVVGSGPGGYVAAIRAAQTGQKVTIVERGALGGVCLNVGCIPSKALISVGHRFENAQ  69
            +D LV+G+G+GGYVAAIRAAQ G+KV +V+++ LGGVCLN GCIPSKALIS ++R  + +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HSDDMGIT-ASEVKLDWSKAQAFkdgvvkklvggvegllkgnkvDIVKGEAYFVDANTVR  128
            H++ MG+  ++EV++D +     KDG+V+KL +G+  LLKGN V+++ GEAY+ +A+  +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VIDGDNAQTYTFKNAILATGSRPIEIPTFKFT-KRVVSSTGALSFPEVPGKLVVIGGGYI  187
            +   D+ Q +++K+ ILA GS P+E+ +  F  KR++SST AL + EVP  LVV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  188  GTELGSAYANLGSQVTIIEGGKDILAGFEKQMTQIvkkglkkkgvevvvNASAKGVEENE  247
            G ELG+AYA++G++VTI+EG+  IL+G +  +T+ VK+ LK  G+ V+ +A  +G E+  
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  248  NGVIVTYEAGGEEKTVEADYVLVTVGRRPNTDEMGLEEVGIKFAERGLLEVDKQGRTSVS  307
            + V V  + +G E  ++ DY LV++GR+PNT+ +GLE++G+ + ++G++ ++++ +T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  308  NIYAIGDIVAGPQLAHKASYEGKVAAEAIAGEPSVVDYLAIPAVCFTDPEMATVGYSEEQ  367
            ++YAIGD  +G  LAHKASYE+K+AAE I+G+ SV+D+ A+P V F+DPE+A  G +E +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  368  AKAEGLEVKAAKFPFAANGRALALNETEGFVKLVARKEDGLLVGAQIVGVGASDMIAEMA  427
            AK  G E  +++FPF AN+RAL++++++GFV++VA K+   ++G Q+VG   S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  428  TAIEGGMTAEDIALTIHAHPTLGEITMEAAEVLLGNPIHIVTK  470
             AIE+G  AED++LTIHAHPTL E  MEAAE ++G++ H++ K
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

257) Natoc_3843 in NC_019974


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  330 bits (1237),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 203/487 (42%), Positives = 340/487 (70%), Gaps = 29/487 (5%)

Query  13   LVIGAGPAGYVAAIRAGQLDLDVTLVEKDAYGGTCLNDGCIPSKALITATNVAHEAGNAE  72
            LVIGAG++GYVAAIRA+QL+  V LV+K   GG CLN GCIPSKALI+A++   +  +A+
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN  102

Query  73   EMGIH--ADPAIDLAGMMGWKDDVVDQLTGGVEKLCKANSVNLLEGTATFADENTVRVSH  130
             MG+   ++  +D++ ++ WKD++V++LT+G+  L K+N+V+++ G A +++ +  ++  
Sbjct  103  TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI  162

Query  131  SGEGQGSETLEFEHAIVATGSRPIEIPGFEYDDEPVIDSTQALALESVPDSMVIVGAGYI  190
             +E Q    + + + I+A GS P+E+ +  +D+  +I ST+AL L+ VP+ +V+VG+GYI
Sbjct  163  EDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  191  GMELAGVYAKLGTDVTVIEMLDSILPGYDDDLKRPVKQRASDLGIEFHFGYAASEWEQQG  250
            G+EL+  YAK+G+ VT++E  D+IL+G D  L + VK++  ++GI               
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--------------  265

Query  251  DGIRVVAETPDEAAADGGSETPQASEEANAEAVEDEPLELDAEKVLVAVGREPVSDTLEL  310
                V++++  +++ + G E     +    E +      ++ +  LV++GR P ++ + L
Sbjct  266  ----VITDALVQGGENTGDEVNVHVQVDGKEEI------IQCDYCLVSIGRKPNTGKIGL  315

Query  311  ENAGVETDDRGFIQTDSRARSNVDHVFAVGDVAGEPMLAHKGSMEGQVAAEVIAGEPSAI  370
            EN GV  DD+GFI+ +++ ++N++HV+A+GD AG  +LAHK+S E+++AAEVI+G+ S I
Sbjct  316  ENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVI  375

Query  371  DYQAMPAAVFTEPEIGTVGMSESEAEDAGFETVIGKFPFRASGRALTTGESDGFVKIVAD  430
            D+QAMP  +F++PE++  G++E EA + G+ETV ++FPF+A++RAL+ +++DGFV++VA+
Sbjct  376  DFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAE  435

Query  431  QEEGYVLGAQIVGPeaseliaelglaielgatleDVASTVHTHPTLSESVMEAAENALGH  490
            ++   VLG Q+VGPE S LIAE  +AIE GA  ED++ T+H+HPTL+E++MEAAE  +GH
Sbjct  436  KNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGH  495

Query  491  AIHTLNR  497
            A H LN+
Sbjct  496  ATHMLNK  502

258) OEOE_0331 in NC_008528


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  330 bits (1240),  Expect = 8e-92, Method: Compositional matrix adjust.
 Identities = 205/463 (45%), Positives = 337/463 (73%), Gaps = 6/463 (1%)

Query  14   IDTVVIGSGPGGYVAAIRAAELGQKVTIIESTFIGGVCLNVGCIPSKALINVGHHYHDAV  73
            +D +VIG+G+GGYVAAIRAA+LG+KV +++ + +GGVCLN GCIPSKALI+ +++  +  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  74   SEQPFGLKSSG-TELDWKTTQEWKQKKVVNQLTGGVEMLLKKHRVDIIHGVASFVDNKQI  132
              +  GLK SG  ++D      WK+  +VN+LT+G+  LLK + V++I G  +++ + +I
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  133  NVVK-GDDHELFQFNNCILATGSRPIEIPGFAFG-KRIVDSTAALSLPEIPKHLIVIGGG  190
              +K  D++++F +++ ILA GS P+E+ + +F+ KRI+ ST AL L E+P+HL+V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  191  VIGFELGSVYQNLGSKVTVIEGLDHVLSGFDKEMIQPVLDDFKAQGGEIFTSAKAKSASQ  250
             IG+ELG+ Y ++G+KVT++EG D +LSG D  + + V  ++K  G  ++T A  +++ +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  251  TEKDVTVTFEADGKEQTVDGDYLLVSVGRRPNTDNIGLNNTNVKLTDRGLVEIDDTMKTN  310
            T  +V V  + DGKE+ ++ DY LVS+GR+PNT++IGL+N  V L D+G++ I++  +TN
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  311  VSHIYAIGDITVGPALAHKASFQGKIAAAAISGDQNAHDLHYSLPAVAYTNYELATTGET  370
            + H+YAIGD + G  LAHKAS+++KIAA  ISG+++  D++ ++P V +++ E+A TG T
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYTGLT  396

Query  371  PESVKEKKLDAKAYKFPFAANGRALSINEGKGFIRLISDNQTKALIGSQIVGPGASDLIS  430
                KEK  ++ + +FPF AN+RALS++++ GF++++++++TK ++G Q+VGP  S LI+
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  431  ELSLAIENGLTTEDISLTIHPHPTLGEAIMDASELADGLPIHI  473
            E  +AIE G  +ED+SLTIH+HPTL E++M+A+E   G + H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

259) ECBG_02161 in NC_020995


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  330 bits (1240),  Expect = 9e-92, Method: Compositional matrix adjust.
 Identities = 210/461 (46%), Positives = 334/461 (73%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSTMFGVT-SENVSLDFTKTQEWKDNKVVKTLTSGVGFLLKKHKVETIEGEAFFVDDHTL  128
            ++   G+  S +V +D      WKD  +V+ LT G+  LLK + VE I GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLALKEVPKKFvvigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +VV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igSELGAAYANLGAEVTILEGSPQILPTYEKDMVKLVEEDFAKKGVTVVTNAMAKEAIDN  247
            IG ELG+AYA++GA VTILEGS  IL+  +  + K V  ++   G+TV+T+A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYAVDGKEESVTADYVMVTVGRRPNTDDMGLEQAGVEVGERGLITVDKQGRTNV  307
            GD V V   VDGKEE +  DY +V++GR+PNT+ +GLE+ GV ++++G+I ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  SNIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTIK  367
             ++YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T K
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  DAKDAGIEAKAFKFPFSGNGRALSLGKTEGFIRLVTTVEDNVIIGAQIAGLGASDMVSEL  427
            +AK+ G E+ + +FPF +N+RALS++ ++GF+++V+  + + ++G Q+ G   S +++E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDAAELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E  M+AAE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

260) pdhD.2 in NC_015601


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  329 bits (1233),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 206/470 (44%), Positives = 323/470 (69%), Gaps = 5/470 (1%)

Query  2    VVGDFAKQADVIVIGSGPGGYVAAIRAAQLGKKVTIIERDEIGGACLNVGCIPSKAMIHA  61
            + G+  K  D++VIG+G+GGYVAAIRAAQLGKKV ++++ E+GG CLN GCIPSKA+I A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SSEYAKTQTNTPFGLS-YGKTSFDMKQAKAWKDKEVVKTLTSGIGALLKKNKIEIVKGEA  120
            S      +     GL   G    DM +   WKD  +V+ LT GI +LLK N +E++ GEA
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  HFMSEDKI-RVVNDMDVQTFSFKDVIIATGSRPIEIPGFKFG-KRILDSTGALNLEVVPK  178
             +++E  I ++  + + Q FS+KD+I+A GS P+E+ +  F+ KRI+ ST AL+L+ VP+
Sbjct  151  -YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  179  SLTIVGGGYIGCELAGVFANLGTEVTILEGAPNILPLFEKDLSAYVVDNFKQKNVTIHTN  238
             L +VGGGYIG EL+  +A++G+ VTILEG+  IL+  +  L+  V  ++K+  +T+ T+
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  239  VKAESAKVENDLVTVTYSQEGKSVTHQSEYVLVTVGRRPNTDDLGLEYAGVTVGQRGLIE  298
               +++    D V V    +GK    Q +Y LV++GR+PNT+ +GLE  GV ++++G+I 
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  299  VNDQGLTNVAHIYAIGDIIPGPALAHKASYEAKVVAEVIAGKTAGFDYTVIPSVSYTHPE  358
            +N++  TN+ H+YAIGD   G  LAHKASYEAK+ AEVI+G+ + +D+  +P V +++PE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  359  IAVVGMNAVEAKDQGIQAKAFKFPYAANGRALSMDDTQGFVRLTVETETGFILGAEIVGA  418
            +A  G+   EAK++G ++ + +FP+ AN+RALS+ D++GFV++  E +T  +LG ++VG+
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  419  QASELLAELTMAIESQLTVEDVSLIIHTHPSLSEMIMDTAELALGYPIHL  468
            + S L+AE   AIE+    ED+SL IH+HP+L+E +M++AE  +G + H+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

261) K210_05425 in NC_021354


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  329 bits (1233),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 206/470 (44%), Positives = 323/470 (69%), Gaps = 5/470 (1%)

Query  2    VVGDFAKQADVIVIGSGPGGYVAAIRAAQLGKKVTIIERDEIGGACLNVGCIPSKAMIHA  61
            + G+  K  D++VIG+G+GGYVAAIRAAQLGKKV ++++ E+GG CLN GCIPSKA+I A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SSEYAKTQTNTPFGLS-YGKTSFDMKQAKAWKDKEVVKTLTSGIGALLKKNKIEIVKGEA  120
            S      +     GL   G    DM +   WKD  +V+ LT GI +LLK N +E++ GEA
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  HFMSEDKI-RVVNDMDVQTFSFKDVIIATGSRPIEIPGFKFG-KRILDSTGALNLEVVPK  178
             +++E  I ++  + + Q FS+KD+I+A GS P+E+ +  F+ KRI+ ST AL+L+ VP+
Sbjct  151  -YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  179  SLTIVGGGYIGCELAGVFANLGTEVTILEGAPNILPLFEKDLSAYVVDNFKQKNVTIHTN  238
             L +VGGGYIG EL+  +A++G+ VTILEG+  IL+  +  L+  V  ++K+  +T+ T+
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  239  VKAESAKVENDLVTVTYSQEGKSVTHQSEYVLVTVGRRPNTDDLGLEYAGVTVGQRGLIE  298
               +++    D V V    +GK    Q +Y LV++GR+PNT+ +GLE  GV ++++G+I 
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  299  VNDQGLTNVAHIYAIGDIIPGPALAHKASYEAKVVAEVIAGKTAGFDYTVIPSVSYTHPE  358
            +N++  TN+ H+YAIGD   G  LAHKASYEAK+ AEVI+G+ + +D+  +P V +++PE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  359  IAVVGMNAVEAKDQGIQAKAFKFPYAANGRALSMDDTQGFVRLTVETETGFILGAEIVGA  418
            +A  G+   EAK++G ++ + +FP+ AN+RALS+ D++GFV++  E +T  +LG ++VG+
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  419  QASELLAELTMAIESQLTVEDVSLIIHTHPSLSEMIMDTAELALGYPIHL  468
            + S L+AE   AIE+    ED+SL IH+HP+L+E +M++AE  +G + H+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

262) MPD5_0995 in NC_016938


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  328 bits (1232),  Expect = 4e-91, Method: Compositional matrix adjust.
 Identities = 209/461 (46%), Positives = 338/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTIVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYRESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSTLFGVS-SKEVTLDFEKTQEWKQKEVVNKLTGGVGFLLKKHQVEILEGEAFFVDDHTL  128
            ++   G+  S EV +D      WK+  +VNKLT+G+  LLK + VE++ GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLGLKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGADVTILEGTSSILPTFEKDMVELVLNEFKQKGMTIVTSAMAKEAVDN  247
            IG ELG AYA++GA VTILEG+ +IL+  +  +   V  ++K+ G+T++T A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVRYEVDGKEQSITADYVMVTVGRRPNTDDLGLEQAGVEVGERGLIHVDEQGRTNI  307
            GD V V+ +VDGKE+ I  DY +V++GR+PNT+ +GLE+ GV ++++G+I ++++ +TNI
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PSIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPSVAFTDPELATVGMTIT  367
              +YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKEAGLEATAYKFPFSGNGRALSLGQPEGFIRLVTTNEEKTIIGAQIGGVGASDMISEL  427
            EAKE G E+ + +FPF +N+RALS+++++GF+++V+ ++ K ++G Q+ G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLAVESGMNAEDIALTIHPHPSLGEITMDVSELALGLPIHI  468
             +A+E+G NAED++LTIH+HP+L E  M+ +E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

263) MPTP_0948 in NC_015516


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  328 bits (1230),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 210/461 (46%), Positives = 338/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTIVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYRESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSTLFGVS-SKEVTLDFEKTQEWKQKEVVNKLTGGVGFLLKKHQVEILEGEAFFVDDHTL  128
            ++   G+  S EV +D      WK+  +VNKLT+G+  LLK + VE++ GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHLDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLGLKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGADVTILEGTSSILPTFEKDMVGLVLNEFKQKGMTIVTSAMAKEAVDN  247
            IG ELG AYA++GA VTILEG+ +IL+  +  +   V  ++K+ G+T++T A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVRYEVDGKEQSITADYVMVTVGRRPNTGDLGLEQAGVEVGERGLIHVDEQGRTNI  307
            GD V V+ +VDGKE+ I  DY +V++GR+PNTG +GLE+ GV ++++G+I ++++ +TNI
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PSIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPSVAFTDPELATVGMTIT  367
              +YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKEAGLEATAYKFPFSGNGRALSLGQPEGFIRLVTTNEEKTIIGAQIGGVGASDMISEL  427
            EAKE G E+ + +FPF +N+RALS+++++GF+++V+ ++ K ++G Q+ G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLAVESGMNAEDIALTIHPHPSLGEITMDVSELALGLPIHI  468
             +A+E+G NAED++LTIH+HP+L E  M+ +E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

264) Lp16_1680 in NC_021514


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1226),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 214/461 (47%), Positives = 327/461 (71%), Gaps = 3/461 (0%)

Query  11   DTMIIGAGPGGYVAAIRAAELGQKVTVVEKEYIGGVCLNVGCIPSKALISAGHRLQEAKD  70
            D ++IGAG+GGYVAAIRAA+LG+KV +V+K  +GGVCLN GCIPSKALISA++R+++ K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SKIFGIKNIQDPVLDFKVTQDWKDHQVVDRLTGGVEMLLKKHKVEVVRGEAYMHDNHTLR  130
            ++  G+K   +  +D      WKD  +V++LT+G+  LLK + VEV+ GEAY+ + H  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  131  VMNGDHTGQTYKFKHLIIATGSRPVEIPGFKFSG-RVVDSTGGLNLPEVPKELVVIGGGY  189
            +   D+  Q + +K+LI+A GS PVE+ +  F   R++ ST +L+L EVP++LVV+GGGY
Sbjct  160  IKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  190  IGSELAGAYANLGAHVTILEGTPQILPNFEKDMVKLVLNSFKKKGVDVITNAMAKNSEQD  249
            IG EL+ AYA++GA VTILEG+  IL+  +  + K V   +K  G+ VIT+A+ + +E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  250  DSGVTVTYAVDGKETEIHADYVMVTVGRRPNTDDMGLEYTDVKLTKRGLIEVDEQGRTAA  309
            +  V V   VDGKE  I+ DY +V++GR+PNT+ +GLE  +V L  +G+I ++++ +T  
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  310  EDIFAIGDIvagaalahkafaeakvaagaISGKKTANDYVSIPAVCFTDPELATVGMTKA  369
            E+++AIGD  +G  LAHKA  EAK+AA  ISG+++  D+ ++P V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  370  EAEEAGLQVKTSKFPFAGNGRAISLNAMDGFFRLVSTKDEGTIVGAQIAGPGASDLISEL  429
            EA E G +  +S+FPF +N+RA+S++  DGF ++V+ K+   ++G Q+ GP  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  430  SVAVNGGMNVEDLALTIHPHPTLGEVVQEAADEAMGYPTHI  470
              A+++G N EDL+LTIH+HPTL E + EAA+  MG +TH+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

265) pdhD in NC_012984


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1226),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 214/461 (47%), Positives = 327/461 (71%), Gaps = 3/461 (0%)

Query  11   DTMIIGAGPGGYVAAIRAAELGQKVTVVEKEYIGGVCLNVGCIPSKALISAGHRLQEAKD  70
            D ++IGAG+GGYVAAIRAA+LG+KV +V+K  +GGVCLN GCIPSKALISA++R+++ K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SKIFGIKNIQDPVLDFKVTQDWKDHQVVDRLTGGVEMLLKKHKVEVVRGEAYMHDNHTLR  130
            ++  G+K   +  +D      WKD  +V++LT+G+  LLK + VEV+ GEAY+ + H  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  131  VMNGDHTGQTYKFKHLIIATGSRPVEIPGFKFSG-RVVDSTGGLNLPEVPKELVVIGGGY  189
            +   D+  Q + +K+LI+A GS PVE+ +  F   R++ ST +L+L EVP++LVV+GGGY
Sbjct  160  IKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  190  IGSELAGAYANLGAHVTILEGTPQILPNFEKDMVKLVLNSFKKKGVDVITNAMAKNSEQD  249
            IG EL+ AYA++GA VTILEG+  IL+  +  + K V   +K  G+ VIT+A+ + +E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  250  DSGVTVTYAVDGKETEIHADYVMVTVGRRPNTDDMGLEYTDVKLTKRGLIEVDEQGRTAA  309
            +  V V   VDGKE  I+ DY +V++GR+PNT+ +GLE  +V L  +G+I ++++ +T  
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  310  EDIFAIGDIvagaalahkafaeakvaagaISGKKTANDYVSIPAVCFTDPELATVGMTKA  369
            E+++AIGD  +G  LAHKA  EAK+AA  ISG+++  D+ ++P V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  370  EAEEAGLQVKTSKFPFAGNGRAISLNAMDGFFRLVSTKDEGTIVGAQIAGPGASDLISEL  429
            EA E G +  +S+FPF +N+RA+S++  DGF ++V+ K+   ++G Q+ GP  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  430  SVAVNGGMNVEDLALTIHPHPTLGEVVQEAADEAMGYPTHI  470
              A+++G N EDL+LTIH+HPTL E + EAA+  MG +TH+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

266) pdhD in NC_021224


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1226),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 214/461 (47%), Positives = 327/461 (71%), Gaps = 3/461 (0%)

Query  11   DTMIIGAGPGGYVAAIRAAELGQKVTVVEKEYIGGVCLNVGCIPSKALISAGHRLQEAKD  70
            D ++IGAG+GGYVAAIRAA+LG+KV +V+K  +GGVCLN GCIPSKALISA++R+++ K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SKIFGIKNIQDPVLDFKVTQDWKDHQVVDRLTGGVEMLLKKHKVEVVRGEAYMHDNHTLR  130
            ++  G+K   +  +D      WKD  +V++LT+G+  LLK + VEV+ GEAY+ + H  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  131  VMNGDHTGQTYKFKHLIIATGSRPVEIPGFKFSG-RVVDSTGGLNLPEVPKELVVIGGGY  189
            +   D+  Q + +K+LI+A GS PVE+ +  F   R++ ST +L+L EVP++LVV+GGGY
Sbjct  160  IKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  190  IGSELAGAYANLGAHVTILEGTPQILPNFEKDMVKLVLNSFKKKGVDVITNAMAKNSEQD  249
            IG EL+ AYA++GA VTILEG+  IL+  +  + K V   +K  G+ VIT+A+ + +E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  250  DSGVTVTYAVDGKETEIHADYVMVTVGRRPNTDDMGLEYTDVKLTKRGLIEVDEQGRTAA  309
            +  V V   VDGKE  I+ DY +V++GR+PNT+ +GLE  +V L  +G+I ++++ +T  
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  310  EDIFAIGDIvagaalahkafaeakvaagaISGKKTANDYVSIPAVCFTDPELATVGMTKA  369
            E+++AIGD  +G  LAHKA  EAK+AA  ISG+++  D+ ++P V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  370  EAEEAGLQVKTSKFPFAGNGRAISLNAMDGFFRLVSTKDEGTIVGAQIAGPGASDLISEL  429
            EA E G +  +S+FPF +N+RA+S++  DGF ++V+ K+   ++G Q+ GP  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  430  SVAVNGGMNVEDLALTIHPHPTLGEVVQEAADEAMGYPTHI  470
              A+++G N EDL+LTIH+HPTL E + EAA+  MG +TH+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

267) pdhD in NC_014554


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1226),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 214/461 (47%), Positives = 327/461 (71%), Gaps = 3/461 (0%)

Query  11   DTMIIGAGPGGYVAAIRAAELGQKVTVVEKEYIGGVCLNVGCIPSKALISAGHRLQEAKD  70
            D ++IGAG+GGYVAAIRAA+LG+KV +V+K  +GGVCLN GCIPSKALISA++R+++ K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SKIFGIKNIQDPVLDFKVTQDWKDHQVVDRLTGGVEMLLKKHKVEVVRGEAYMHDNHTLR  130
            ++  G+K   +  +D      WKD  +V++LT+G+  LLK + VEV+ GEAY+ + H  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  131  VMNGDHTGQTYKFKHLIIATGSRPVEIPGFKFSG-RVVDSTGGLNLPEVPKELVVIGGGY  189
            +   D+  Q + +K+LI+A GS PVE+ +  F   R++ ST +L+L EVP++LVV+GGGY
Sbjct  160  IKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  190  IGSELAGAYANLGAHVTILEGTPQILPNFEKDMVKLVLNSFKKKGVDVITNAMAKNSEQD  249
            IG EL+ AYA++GA VTILEG+  IL+  +  + K V   +K  G+ VIT+A+ + +E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  250  DSGVTVTYAVDGKETEIHADYVMVTVGRRPNTDDMGLEYTDVKLTKRGLIEVDEQGRTAA  309
            +  V V   VDGKE  I+ DY +V++GR+PNT+ +GLE  +V L  +G+I ++++ +T  
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  310  EDIFAIGDIvagaalahkafaeakvaagaISGKKTANDYVSIPAVCFTDPELATVGMTKA  369
            E+++AIGD  +G  LAHKA  EAK+AA  ISG+++  D+ ++P V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  370  EAEEAGLQVKTSKFPFAGNGRAISLNAMDGFFRLVSTKDEGTIVGAQIAGPGASDLISEL  429
            EA E G +  +S+FPF +N+RA+S++  DGF ++V+ K+   ++G Q+ GP  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  430  SVAVNGGMNVEDLALTIHPHPTLGEVVQEAADEAMGYPTHI  470
              A+++G N EDL+LTIH+HPTL E + EAA+  MG +TH+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

268) pdhD in NC_004567


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1226),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 214/461 (47%), Positives = 327/461 (71%), Gaps = 3/461 (0%)

Query  11   DTMIIGAGPGGYVAAIRAAELGQKVTVVEKEYIGGVCLNVGCIPSKALISAGHRLQEAKD  70
            D ++IGAG+GGYVAAIRAA+LG+KV +V+K  +GGVCLN GCIPSKALISA++R+++ K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SKIFGIKNIQDPVLDFKVTQDWKDHQVVDRLTGGVEMLLKKHKVEVVRGEAYMHDNHTLR  130
            ++  G+K   +  +D      WKD  +V++LT+G+  LLK + VEV+ GEAY+ + H  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  131  VMNGDHTGQTYKFKHLIIATGSRPVEIPGFKFSG-RVVDSTGGLNLPEVPKELVVIGGGY  189
            +   D+  Q + +K+LI+A GS PVE+ +  F   R++ ST +L+L EVP++LVV+GGGY
Sbjct  160  IKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  190  IGSELAGAYANLGAHVTILEGTPQILPNFEKDMVKLVLNSFKKKGVDVITNAMAKNSEQD  249
            IG EL+ AYA++GA VTILEG+  IL+  +  + K V   +K  G+ VIT+A+ + +E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  250  DSGVTVTYAVDGKETEIHADYVMVTVGRRPNTDDMGLEYTDVKLTKRGLIEVDEQGRTAA  309
            +  V V   VDGKE  I+ DY +V++GR+PNT+ +GLE  +V L  +G+I ++++ +T  
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  310  EDIFAIGDIvagaalahkafaeakvaagaISGKKTANDYVSIPAVCFTDPELATVGMTKA  369
            E+++AIGD  +G  LAHKA  EAK+AA  ISG+++  D+ ++P V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  370  EAEEAGLQVKTSKFPFAGNGRAISLNAMDGFFRLVSTKDEGTIVGAQIAGPGASDLISEL  429
            EA E G +  +S+FPF +N+RA+S++  DGF ++V+ K+   ++G Q+ GP  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  430  SVAVNGGMNVEDLALTIHPHPTLGEVVQEAADEAMGYPTHI  470
              A+++G N EDL+LTIH+HPTL E + EAA+  MG +TH+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

269) pdhD in NC_020229


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1226),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 214/461 (47%), Positives = 327/461 (71%), Gaps = 3/461 (0%)

Query  11   DTMIIGAGPGGYVAAIRAAELGQKVTVVEKEYIGGVCLNVGCIPSKALISAGHRLQEAKD  70
            D ++IGAG+GGYVAAIRAA+LG+KV +V+K  +GGVCLN GCIPSKALISA++R+++ K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   SKIFGIKNIQDPVLDFKVTQDWKDHQVVDRLTGGVEMLLKKHKVEVVRGEAYMHDNHTLR  130
            ++  G+K   +  +D      WKD  +V++LT+G+  LLK + VEV+ GEAY+ + H  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  131  VMNGDHTGQTYKFKHLIIATGSRPVEIPGFKFSG-RVVDSTGGLNLPEVPKELVVIGGGY  189
            +   D+  Q + +K+LI+A GS PVE+ +  F   R++ ST +L+L EVP++LVV+GGGY
Sbjct  160  IKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  190  IGSELAGAYANLGAHVTILEGTPQILPNFEKDMVKLVLNSFKKKGVDVITNAMAKNSEQD  249
            IG EL+ AYA++GA VTILEG+  IL+  +  + K V   +K  G+ VIT+A+ + +E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  250  DSGVTVTYAVDGKETEIHADYVMVTVGRRPNTDDMGLEYTDVKLTKRGLIEVDEQGRTAA  309
            +  V V   VDGKE  I+ DY +V++GR+PNT+ +GLE  +V L  +G+I ++++ +T  
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  310  EDIFAIGDIvagaalahkafaeakvaagaISGKKTANDYVSIPAVCFTDPELATVGMTKA  369
            E+++AIGD  +G  LAHKA  EAK+AA  ISG+++  D+ ++P V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  370  EAEEAGLQVKTSKFPFAGNGRAISLNAMDGFFRLVSTKDEGTIVGAQIAGPGASDLISEL  429
            EA E G +  +S+FPF +N+RA+S++  DGF ++V+ K+   ++G Q+ GP  S LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  430  SVAVNGGMNVEDLALTIHPHPTLGEVVQEAADEAMGYPTHI  470
              A+++G N EDL+LTIH+HPTL E + EAA+  MG +TH+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

270) pdhD in NC_017022


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1225),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 210/461 (46%), Positives = 338/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSEMFGVT-SENVKLDFAKTQEWKENKVVHTLTSGVGFLLKKHKVETIEGEAFFVDDHTL  128
            +++  G+  S +V++D +    WK+  +V+ LT G+  LLK + VE I GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLALKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGAEVTILEGSPQILPTYEKDLVKLVEDDFKKKGVTVVTNAMAKEAVDN  247
            IG ELG AYA++GA VTILEGS  IL+  +  L K V  ++K  G+TV+T+A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYAVDGKEESVTADYVMVTVGRRPNTDDMGLEQAGVEVGERGLITVDKQGRTNV  307
            GD V V   VDGKEE +  DY +V++GR+PNT+ +GLE+ GV ++++G+I ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTIK  367
             ++YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T K
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDAGIEAKAYKFPFSGNGRALSLGKTEGFIRLVTTIEDNVLIGAQIGGVGASDMVSEL  427
            EAK+ G E+ + +FPF +N+RALS++ ++GF+++V+  + + ++G Q+ G   S +++E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEIVMDASELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E +M+A+E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

271) pdhD in NC_021994


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1225),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 210/461 (46%), Positives = 338/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSEMFGVT-SENVKLDFAKTQEWKENKVVHTLTSGVGFLLKKHKVETIEGEAFFVDDHTL  128
            +++  G+  S +V++D +    WK+  +V+ LT G+  LLK + VE I GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLALKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGAEVTILEGSPQILPTYEKDLVKLVEDDFKKKGVTVVTNAMAKEAVDN  247
            IG ELG AYA++GA VTILEGS  IL+  +  L K V  ++K  G+TV+T+A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYAVDGKEESVTADYVMVTVGRRPNTDDMGLEQAGVEVGERGLITVDKQGRTNV  307
            GD V V   VDGKEE +  DY +V++GR+PNT+ +GLE+ GV ++++G+I ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTIK  367
             ++YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T K
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDAGIEAKAYKFPFSGNGRALSLGKTEGFIRLVTTIEDNVLIGAQIGGVGASDMVSEL  427
            EAK+ G E+ + +FPF +N+RALS++ ++GF+++V+  + + ++G Q+ G   S +++E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEIVMDASELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E +M+A+E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

272) lpdA in NC_017960


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1225),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 210/461 (46%), Positives = 338/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSEMFGVT-SENVKLDFAKTQEWKENKVVHTLTSGVGFLLKKHKVETIEGEAFFVDDHTL  128
            +++  G+  S +V++D +    WK+  +V+ LT G+  LLK + VE I GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLALKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGAEVTILEGSPQILPTYEKDLVKLVEDDFKKKGVTVVTNAMAKEAVDN  247
            IG ELG AYA++GA VTILEGS  IL+  +  L K V  ++K  G+TV+T+A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYAVDGKEESVTADYVMVTVGRRPNTDDMGLEQAGVEVGERGLITVDKQGRTNV  307
            GD V V   VDGKEE +  DY +V++GR+PNT+ +GLE+ GV ++++G+I ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTIK  367
             ++YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T K
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDAGIEAKAYKFPFSGNGRALSLGKTEGFIRLVTTIEDNVLIGAQIGGVGASDMVSEL  427
            EAK+ G E+ + +FPF +N+RALS++ ++GF+++V+  + + ++G Q+ G   S +++E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEIVMDASELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E +M+A+E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

273) M7W_1726 in NC_020207


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  327 bits (1225),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 210/461 (46%), Positives = 338/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSEMFGVT-SENVKLDFAKTQEWKENKVVHTLTSGVGFLLKKHKVETIEGEAFFVDDHTL  128
            +++  G+  S +V++D +    WK+  +V+ LT G+  LLK + VE I GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLALKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGAEVTILEGSPQILPTYEKDLVKLVEDDFKKKGVTVVTNAMAKEAVDN  247
            IG ELG AYA++GA VTILEGS  IL+  +  L K V  ++K  G+TV+T+A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYAVDGKEESVTADYVMVTVGRRPNTDDMGLEQAGVEVGERGLITVDKQGRTNV  307
            GD V V   VDGKEE +  DY +V++GR+PNT+ +GLE+ GV ++++G+I ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTIK  367
             ++YAIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T K
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKDAGIEAKAYKFPFSGNGRALSLGKTEGFIRLVTTIEDNVLIGAQIGGVGASDMVSEL  427
            EAK+ G E+ + +FPF +N+RALS++ ++GF+++V+  + + ++G Q+ G   S +++E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEIVMDASELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E +M+A+E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

274) Hoch_3234 in NC_013440


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  326 bits (1222),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 191/455 (42%), Positives = 315/455 (70%), Gaps = 11/455 (2%)

Query  2    SAIERY-DAVIIGSGPGGYAAGIRLGQLGVKTAVIERETPGGVCLNVGCIPSKALIHAAK  60
            + + +Y D ++IG+G+GGY A+IR +QLG K  ++++   GGVCLN GCIPSKALI A+ 
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE  93

Query  61   TYEKMSSSASMGITLSAPPTLDMDAMQTWKRGVVTKLTRGVAQLLKSAGTKLVRGTGRLA  120
                +  + +MG+ +S+   +DM  +  WK G+V KLT G+  LLK+ G  ++ G + L+
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  121  GHSQGRHRVEVSGEDACVIEAEHVVVATGSRPIEIPGFAVDGERVLDSTGALALTRVPDH  180
                ++ ++E   ++  ++   ++++A GS P+E+ + + D  R++ ST AL L  VP+H
Sbjct  154  EAHIAKIKIE---DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  181  LVVIGGGYIGLELGTVYAKLGSKVTVVEALDSVLAGMEPECVAVVARKLRKKGVEVLTGA  240
            LVV+GGGYIGLELGT YAK+G+KVT++E+ D++L+G +P     V R L+  G+ V+T+A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  241  RAKAWRPGASASAAVLSIDTAKGPRE--LETDAILVSVGRRPNSENLGLAEAGVQLDERG  298
              +    G+  ++  ++++   + +E  ++ D  LVS+GR+PN+ ++GL + GV LD++G
Sbjct  271  LVQ----GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  299  FIPVDAALRTNVAGIYAIGDVAGGVMLAHKATKEAEVVAEVIAGHDEVQDARTIPAVVFT  358
            FI ++   +TN+  +YAIGD AGG +LAHKA+ EA + AEVI+G++ V D +++P V+F+
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  359  DPEIASAGMTEAQARAAGHEDLKIGKFPFAALGRALSVDDTDGFAKVIGDARSGEILGVH  418
            DPE+A +G+TE +A+  G E +  ++FPF A +RALSV D+DGF +V+++  +  +LGV+
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVS-SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  419  VVGTGASDLISEAALAIESGSELRDLALTVHPHPT  453
            +VG   S LI+EA +AIE+G++  DL+LT+H+HPT
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPT  480

275) Natoc_4336 in NC_019976


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  325 bits (1219),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 206/465 (45%), Positives = 322/465 (70%), Gaps = 6/465 (1%)

Query  11   DVLVIGAGPGGYVAAIRAAQLGLDVTLVEKDAYGGTCLNHGCIPSKALISATDLAHRTRE  70
            D+LVIGAG+GGYVAAIRAAQLG  V LV+K   GG CLN+GCIPSKALISA++   + ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   ASHMGIH--AELTIEMSELVAWKDQVVEQLTSGVEKLCKGNGVTLVEGAAEFTGENTVRI  128
            A+ MG+   +E+ ++M+E+V WKD +V++LT G+  L KGNGV ++ G A +T  +  +I
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  129  TNSREDDTNRLEFEHAIVATGSQPVELPGFEFDGEQILSSRDALAMESIPDRLIVVGAGY  188
                ED+ + + + + I+A GS PVEL +  FD  +I+SS +AL ++ +P++L+VVG+GY
Sbjct  161  KI--EDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  189  IGMELATVFAKAGANVTVIEMLDEALPGYGADVTRVVKQRATELGIEFHFEAAADSWERT  248
            IG+EL+T +AK GA+VT++E  D  L+G ++ +T+ VK++  E+GI    +A  ++ E T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  249  TDGITVTTTSEDGGVSEFTAEKALVAVGRKPVTETVSLEAAGVETDEDGFVPTDDYARTN  308
             D + V     DG    +  +  LV++GRKP T  ++LE  GV  D++GF+  ++  +TN
Sbjct  279  GDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  309  REHIFAVGDVAGEPMLAHKGMYEGEIAAEYIAGGSATVDPQAIPAVVFTDPEIATVGMTE  368
             EH++A+GD AG  +LAHK+ YE+ IAAE I+G ++ +D QA+P V+F+DPE+A  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  369  AEAAKAGFDPIVGEMHLRGSGRALTMDEASGFVRVIAA-ETGNVVGAQIVAPEASELIAE  427
             EA   G++ + +   +++++RAL++ +A GFV+V+A  +T  V+G Q+V+PE S LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  428  LGLVIESEMSLDAMIETVHAHPTLSETVREAAANAAGQAIHTLNR  472
              + IE+  + + +  T+HAHPTL+E + EAA    G+A H LN+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

276) HacjB3_00135 in NC_014297


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  323 bits (1212),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 207/475 (44%), Positives = 337/475 (71%), Gaps = 6/475 (1%)

Query  2    VVGDIATGTDVLVIGAGPGGYVAAIRAGQLDLDVTLVEKDAYGGTCLNHGCIPSKALITA  61
            + G++    D+LVIGAG+GGYVAAIRA+QL+  V LV+K   GG CLN+GCIPSKALI+A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   TGVAHEAGNAEAMGIH--ADPAIDMGGMMEWKDGVVDQLTGGVEKLCKANGVNLVEGIAE  119
            +    +  +A++MG+   ++  +DM  ++ WKDG+V++LT+G+  L K+NGV+++ G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FDGENRARVAHGGDGQGSESIEFEHAIVATGSRPVEIPGFEFDGERVVSSREALSLESVP  179
            +   + A++   ++ Q    + + + I+A GS PVE+ +  FD  R++SS EAL L+ VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  DSLVIVGAGYIGMELAGVFAKLGTDVTVVEMLDEALVGFADDLAKPVVDGMEDLGVEIRL  239
            + LV+VG+GYIG+EL+  +AK+G+ VT++E  D  L G    L+K V   + ++G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  240  GEAASDWEETGDGISVTTETDEGEETNYDCEKVLVAVGRQPVTDTLNLEAIGLEPDENGF  299
            +    + E+TGD ++V  + D  EE   +C+  LV++GR+P T+ + LE IG+  D++GF
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEII-QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  300  LQTDDRARTDVENVFAVGDVAGEPMLAHKGMKegqvaaevvageasaLDYQAVPAAVFTE  359
            ++ +++ +T++E+V+A+GD AG  +LAHK+  E+++AAEV++G+ S +D+QA+P  +F++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  360  PEIGTVGMTeaeaeeaGFEPAVGQMPFRASGRALTTGHTDGFVRIVADAESGFVLGGQIV  419
            PE++  G+TE EA E G+E   ++ PF+A++RAL+ +++DGFV++VA+ ++  VLG Q+V
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  420  GPEASELIAEIGLAIELGATLEDVAATIHTHPTLSEAVHEAAENALGHAIHTLNR  474
            GPE S LIAE  +AIE GA  ED++ TIH+HPTL+E++ EAAE  +GHA H LN+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

277) BcerKBAB4_2393 in NC_010184


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  322 bits (1209),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 214/453 (48%), Positives = 329/453 (73%), Gaps = 2/453 (0%)

Query  5    ETIVIGSGPGGYVAAIRASQLGQQVAIIERENLGGVCANVGCIPSKALISVGHRFEETKH  64
            + +VIG+G+GGYVAAIRA+QLG++V ++++ +LGGVC N GCIPSKALIS ++R  + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   SEDMGI-FSSGVNVDFAKVQEFKNNvvkklvggvegllkSNKVEVIKGEAYFMDANTIRV  123
            ++ MG+  S+ V+VD + V   K+ +V+KL +G+  LLK+N VEVI GEAY+ +A+  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  124  TNKDAAQTYTFKNAIIATGSRPVEIPTFKFT-KRVINSTGVLSLTEVPSKLVVIGGGYIG  182
               D  Q +++K+ I+A GS PVE+ +  F  KR+I+ST  L L EVP+ LVV+GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  183  TELGSAYASLGSIVTIIEGGKDILTGFDKQMTQIVKEDLINKGVTVIVDASAKGVEEVEN  242
             ELG+AYA +G+ VTI+EG+  IL+G D  +T+ VK +L + G+TVI DA  +G E+  +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  243  GVIVTCEIDGEEKKVDADYVLVTVGRRPNTENMGFEKIGIEFSDRGLLKIDQQCRTNLPN  302
             V V  ++DG E  ++ DY LV++GR+PNT ++G+E+IG+ + D+G++KI+++C+TN+ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  303  IFAIGDIIAGPQLAHKAFYEGKVAAEAISGELSCVDYLAIPAVCFTNPELATVGYTEERA  362
            ++AIGD  +G  LAHKA YE+K+AAE ISG+ S +D+ A+P V F++PE+A  G TE  A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  363  KAEGMEVKVIQSPFSANGCALVSNEGKGFLRLLVRKEDGVLVGAQIVGNGASEIIAEMGL  422
            K  G E    + PF AN+ AL  +++ GF++++  K+   ++G Q+VG   S +IAE  +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  423  AIESGMTVEDIALTPHAQLTLSEIVMEAAEALI  455
            AIE+G   ED++LT HA+ TL+E +MEAAE+++
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVM  493

278) Rleg2_4388 in NC_011368


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  322 bits (1207),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 208/463 (45%), Positives = 318/463 (69%), Gaps = 10/463 (2%)

Query  8    LLVIGAGPGGYVCAIRAGQLGIDTVIVEAGKPGGTCLTVGCIPSKALIHAAEEFDATQKM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+ +  GG CL  GCIPSKALI A+E      K 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE----RVKH  97

Query  68   LAGKNPMGIRVEGA-SIDLGRTIAWKDGIVGRLTGGVSGLLQKSRVKIVHGRAHFRDGKT  126
            +   N MG++V G   +D+   + WKDGIV +LT+G+  LL+ + V ++ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGQQIIRAETVVIATGSDPVELSNLPFGG-RVISSTEALSLTELPNKLVVVGGG  185
              +  E  +QI+    +++A GS PVEL ++PF+  R+ISSTEAL L E+PN LVVVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFSKMGSAVTVVEATPQVLPLYDAELVRPVLRRLTEMGIRVLTGAKAIGLTD  245
            YIGLELGTA++K G+ VT++E++  +L+  D+ L + V R+L E+GI V+T+A   G  +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  NGEALIAETS-DGRRETLSADRILVTVGRRPRTAGSGLEELD--LDRAGPYLRIDDRCRT  302
             G+ +  +   DG+ E +  D  LV++GR+P T+  GLE+++  LD  G +++I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  303  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIIAGRKRAWDKRCIPAICFTDPEIVSAGLS  362
            ++  +YAIGD +G  +LAH+A  ++ + AE+I+G++   D + +P + F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PAEARAQGYEIRTGQFPFSANGRAMTMVSEEGFVRVVARADTNLVLGLQAVGAGVSELSA  422
              EA+ +GYE  +++FPF AN+RA+++   +GFV+VVA  +T+ VLG+Q VG+ VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  AFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALKAMGSALHI  465
               +AIE GA  ED++ TIHAHPT +E++MEAA   MG A H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

279) SCE1572_45975 in NC_021658


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  321 bits (1205),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 212/455 (47%), Positives = 330/455 (73%), Gaps = 5/455 (1%)

Query  1    MKTY-DAIVIGAGPGGYPCAIRLAQLKQTTLCIEKEQPGGVCLNWGCIPSKALISAAHLY  59
            +K Y D +VIGAG+GGY  AIR AQL +  + ++K + GGVCLN+GCIPSKALISA++  
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  60   EKSQAGASMGIKVSG-VELDANAMQDWKEGIVKKLTGGVRSLLKGNGADLMTGTATIVGP  118
               + + +MG+KVSG V++D   +  WK+GIV+KLT+G+R+LLKGNG ++++G A +  +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  119  KRVDVTLPDGSVEQIEAKKAIVIATGSTTIEIPSFKFDGQSIIGAKEAVSLRQIPKRlmv  178
                + + D   EQI + K +++A GS  +E+ S  FD + II++ EA+ L+++P++L+V
Sbjct  156  HIAKIKIEDE--EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  179  igggviglelgmvYQAFGSQLTVVEALPDLLTGVDPDCTKIVERKILKRGGTIHKNAKAI  238
            +GGG IGLELG  Y  FG+++T++E+   +L+G DP  TK V R +   G T+  +A   
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  239  GYEKQKDGSVGVKIQIEGKEQTIVVDTVLVAVGMRPTSKGLGLEKVGVTVDQRGFIPTDK  298
            G   + ++ V V +Q++GKE+ I  D  LV++G +P +  +GLE++GV +D++GFI  ++
Sbjct  274  G-GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  299  TCRTNVPSIYAIGDVSGPPLLAHKATKEGEIVAEVIAGHKAAKDWVAIPGAIFTDPEIAT  358
             C+TN+  +YAIGD +G  LLAHKA+ E+ I AEVI+G+++  D  A+P  IF+DPE+A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  359  VGLTEAEAKAKGLEVSVGKFPFSALGKAMALNETEGFVKIVADKKTKQVLGVHIVGPEAS  418
             GLTE EAK KG E   ++FPF A ++A+++++++GFV++VA+K+TK+VLGV++VGPE S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  419  TMISEASLSLEMAAFLEDLSLTIHPHPTLGESLME  453
            ++I+EA +++E +A  EDLSLTIH+HPTL E+LME
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLME  487

280) lpdA in NC_015278


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  320 bits (1200),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 215/449 (48%), Positives = 325/449 (73%), Gaps = 10/449 (2%)

Query  26   IRAAQMGQKVAIIEREYIGGVCLNVGCIPSKALIQAG----HAYHEANGGLDVFGVDSKA  81
            IRAAQ+G+KV ++++  +GGVCLN GCIPSKALI A+    H  H    GL V    +  
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKV---SGEV  112

Query  82   SLDFTKTQEWKDNSVVKTLTSGVEMLLKKNKVEIIRGEAFFNNERELTVMGEGDEHQLYS  141
             +D      WKD ++V+ LT G+  LLK N VE+I GEA++ + +   +  E DE+Q++S
Sbjct  113  QVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIE-DEEQIFS  170

Query  142  YKHAIIATGSHPIEIKGFKFGG-RVIDSTGALNLKEVPKKLvvigggvigAELGSAYANL  200
            YK+ I+A GS P+E+K+  F+  R+I ST AL+L+EVP+ LVV+GGG IG ELG+AYA++
Sbjct  171  YKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKF  230

Query  201  GSQVTILEGSPQILPNFEKDMVKVVEKGMKAKGMDIHVNAMAKEAVDNGDSVTVKYEIDG  260
            G++VTILEGS  IL+  +  + K V + +K  G+ +  +A+ + + + GD V V  ++DG
Sbjct  231  GAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDG  290

Query  261  KANEVEADYVLVCVGRRPNTEDLGLEALGVKKNDRGLIEVDNQGRTSVKNIFAIGDVVPG  320
            K + ++ DY LV +GR+PNT  +GLE +GV  +D+G+I ++N+ +T++ +++AIGD   G
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  321  AALAHKASYEgkiaaeaisgkaaaVDYKVMPSVAFTDPEIASYGLTEKEAKDQGLDVKAT  380
              LAHKASYE+KIAAE ISG+ + +D++ MP V F+DPE+A  GLTEKEAK++G +  ++
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  381  KFPLAGNGRALSLNQKEGFVRLVATKDDKVIVGAQMVGVGASDVMAEAGLAIEAGMNAED  440
            +FP+ +N+RALS+++ +GFV++VA K+ K ++G QMVG   S ++AEA +AIEAG NAED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  441  IALTIHGHPSLGESLMDTAEGVLGMPIHM  469
            ++LTIH+HP+L E+LM++AEGV+G + HM
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

281) Natgr_1350 in NC_019792


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  320 bits (1200),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 194/463 (42%), Positives = 322/463 (70%), Gaps = 18/463 (3%)

Query  26   IRAGQLDLDVTLVEKDAYGGTCLNYGCIPSKALITATDIAHEARHAEEMG--IHADPAVD  83
            IRA+QL+  V LV+K   GG CLN GCIPSKALI+A++   + +HA+ MG  + ++  VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  84   MAGLIGWKDDVVDQLTGGVEKLCKANQVNLLEGTATFADENTARISHSGDGQGSETLEFE  143
            M+ ++ WKD++V++LT+G+  L K+N V+++ G A +++ + A+I   ++ Q    + + 
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQ---IFSYK  172

Query  144  HAIVATGSRPIEIPNFSYDDEPVLSSKDALDLESVPESLVVVGAGYIGMELASVFAKLGT  203
            + I+A GS P+E+ + ++D+  ++SS +AL+L+ VP+ LVVVG+GYIG+EL++ +AK+G+
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  204  DVTVVEMLDSILPGYDDDLKRPVKQRADDLGIEFEFGYTASEWNENGDDIRVTAEPAKQa  263
             VT++E  D+IL+G D  L + VK++  ++GI    +      ++ GD++ V  +   + 
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKE  292

Query  264  atdggaeaveadaleldaeKVLVAVGRQPVSDTLGLEEAGVETDDNGFIETDSRARTSVD  323
                                 LV++GR+P ++ +GLE+ GV  DD+GFI  +++ +T+++
Sbjct  293  EIIQCDY-------------CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  324  HIFAVGDVAGEPMLAHKGSAEGQVAAEVIAGEPAASDHQAMPAVVFTDPEIATVGMTKSE  383
            H++A+GD AG  +LAHK+S E+++AAEVI+G+ +  D QAMP V+F+DPE+A  G+T  E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  384  AEDAGFETVTGEFPLRASGRALTMDEPDGFVKIVAEKEGGYVLGAGIVAPEASELVAELG  443
            A + G+ETV++ FP++A++RAL++ ++DGFV++VAEK+   VLG  +V+PE S L+AE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  444  LAIELGATLEDVASTVHAHPTLSESVMEAAENALGHAIHTLNR  486
            +AIE GA  ED++ T+HAHPTL+E++MEAAE  +GHA H LN+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

282) ECBG_02482 in NC_020995


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  320 bits (1199),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 215/461 (47%), Positives = 327/461 (71%), Gaps = 6/461 (1%)

Query  6    DTLVIGSGPGGYVAAIRAAQLGQQVTIVESNAIGGVCLNVGCIPSKALIHAGHVYQESKH  65
            D LVIG+G+GGYVAAIRAAQLG++V +V+   +GGVCLN GCIPSKALI A++  ++ KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   SHYLGIT-NQQTTLDFQTLQKWKDETVVQKLTSGIRGLLLKNKVQIVKGYARFLSPNQVE  124
            ++ +G+  + +  +D   + KWKD  +V+KLT GIR LL  N V+++ G   +L+  ++ 
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  -IK-GKGEKTIQFKQAIIATGSRPIEIPGFAFGD-RILDSTGALSLKEVPKKLviigggv  181
             IK    E+ + +K+ I+A GS P+E+ + +F++ RI+ ST AL L+EVP+ LV++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  182  igTELGSAYADLGADVTILEGLEQLLPSYEKDLVAVVEASFAKKGIKIVTGAMAKSVKSH  241
            IG ELG+AYA +GA VTILEG + +L++ +  L   V   +   GI ++T+A+ ++  + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  242  DTGVEVTVRADQNETILTADYVLVTVGRKPNTEDLGLAQAKIETGTNGWIRVNQKYQTSQ  301
            +  V+V V+ D +E I+  DY LV++GRKPNT  +GL +  +  + +G I++N+K QT+ 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  302  AHIYAIGDVIEGPALAHKASYDAKIAAEVISGKNVAKDYRAIPAICFTDPEIATVGKTLA  361
             H+YAIGD   G  LAHKASY+AKIAAEVISG+N   D++A+P + F+DPE+A  G T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  362  EAKTQGLAADTASFPFQANGRALSLNTYEGFVRLVFDKDSEVVIGGQIVGPGASDLIAEI  421
            EAK +G  + ++ FPFQAN+RALS++  +GFV++V +K++  V+G Q+VGP  S LIAE 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  422  TLAIESGLTLEDIALTIHGHPTLSEVIMDTTELALGLPIHL  462
             +AIE+G   ED++LTIH+HPTL+E +M+++E  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

283) lpdA in NC_013967


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  319 bits (1198),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 204/476 (43%), Positives = 334/476 (71%), Gaps = 7/476 (1%)

Query  2    VVGDIATGTELLVIGAGPGGYVAAIRAAQNGIDTTLVEKDAYGGTCLNYGCIPSKALITG  61
            + G++    +LLVIGAG+GGYVAAIRAAQ G    LV+K   GG CLN GCIPSKALI++
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   ANLAHEAGNAEEMGIH--ADPVVDMSQLRDWKSGVVDQLTGGVEKLCKANGVNLVEGTAR  119
            ++   +  +A+ MG+   ++  VDM+++  WK G+V++LT+G+  L K+NGV+++ G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FKDENAVRIAHGGEGQGSETIEFEHCIIATGSRVIQIPGFDFGDEPVWSSRDALEADTVP  179
            + + +  +I   +E Q    + + + I+A GS  +++ +  F++  + SS +AL+ + VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  ERLVVVGGGYIGMELSTTFAKLGADVTVVEMLDDILPGYESDVARVVRKRAEELGIDMHL  239
            ++LVVVGGGYIG+EL+T++AK+GA VT++E  D IL+G ++ +++ V+++  E+GI +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  240  GEGASGWREEDDGIMVTTETEDGEENEYRADKVLVAVGRSPVTDTMDIENAGLEADDRGF  299
            +    G  + +D + V  +  DG E+  + D  LV++GR P T+ +++EN G+  DD+GF
Sbjct  269  DALVQGGENTGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  300  LSVDDRRRTDVEHIYAVGDVVEDTPMLAHVASKEGIVAAEHVAGEPVAFDSQAVPAAVFT  359
            + ++++ +T++EH+YA+GD   +  +LAH AS E+ +AAE ++G+   +D QA+P  +F+
Sbjct  328  IKINNKCQTNIEHVYAIGDC-AGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  360  DPEIGTVGMTEADAEEAGFTPVVGQMPFRASGRALTTNHADGFVRVVADEESGFVLGAQI  419
            DPE++  G+TE +A E G+  V ++ PF+A++RAL+ ++ADGFV+VVA+ ++  VLG Q+
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  420  VGPEASELIAELAFAIEMGATLEDVASTIHTHPTLAEAVMEAAENALGQAIHTLNR  475
            VGPE S LIAE  FAIE GA  ED++ TIH+HPTL+E++MEAAE  +G+A H LN+
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

284) lpdA in NC_004668


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  318 bits (1193),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 207/461 (45%), Positives = 340/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQEAQ  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++ +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSSTFGVTAKG-VELDFAKTQDWKDNTVVKSLTGGVGMLLKKHKVEIIEGEAFFVDENTL  128
            +++T G+   G V++D +    WKD  +V+ LT+G+  LLK + VE+I GEA++ + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIVATGSRPIEIPGFKFGG-RVLDSTGGLNLKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L+L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGSEVTILEGSPSILPTYEKDMVKVVTDHFKKKNVTIVTSAMAKEAVDN  247
            IG ELG AYA++G+ VTILEGS +IL+  +  + K V  H+K   +T++T A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYEVNGKEESVEADYVMVTVGRRPNTDDLGLEQAGVEIGERGLIPVDNQGRTNV  307
            GD V V  +V+GKEE ++ DY +V++GR+PNT+ +GLE+ GV ++++G+I ++N+ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KNIFAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTVa  367
             +++AIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  eakeagieakgYKFPFAGNGRAISLDKTEGFMRLVTTVEDNVIIGAQIAGVGASDMISEL  427
            EAKE G E+ + +FPF +N+RA+S+  ++GF+++V+  + + ++G Q+ G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDTAELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E  M++AE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

285) Natpe_0223 in NC_019962


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  318 bits (1193),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 207/479 (44%), Positives = 336/479 (71%), Gaps = 21/479 (4%)

Query  13   LVIGAGPAGYVAAIRAGQLDLDVTLVEKDAYGGTCLNYGCIPSKALItatdvahhaataE  72
            LVIGAG++GYVAAIRA+QL+  V LV+K   GG CLN GCIPSKALI+A++   H   A+
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN  102

Query  73   EMG--VHADPEIDLGEMMTWKDGVVDQLTSGVEKLCKANGVSLLEGTARFAGENTARVSH  130
             MG  V ++ ++D+ E++ WKDG+V++LT G+  L K+NGV ++ G A ++  + A++  
Sbjct  103  TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI  162

Query  131  SGEGQGSESLEFEHAVIATGSRPIEIPNFDFGDGPVLDSRQALALESVPDSLVVVGAGYI  190
             +E Q    + + + ++A GS P+E+ +  F++  ++ S +AL L+ VP+ LVVVG+GYI
Sbjct  163  EDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  191  GMELASVFAKLGTDVTVIEMLDSILPGYDDDLKRPVKGRATDLGIEFEFGYTASEWHERD  250
            G+EL++ +AK+G+ VT++E  D+IL+G D  L + VK +  ++GI        ++     
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT-----VITD-----  269

Query  251  GDDGIRVVAEPADNAAADGGSAEAVEDERLELEAEKVLVAVGRQPVSDTLDLEEAGVETD  310
                   + + ++N++ +      V++    ++ +  LV++GR+P ++ ++LE+ GV  D
Sbjct  270  ------ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD  323

Query  311  DAGFIETDSRARTNLEHIFAVGDVAGEPMLAHKGSAEGKVAAEVIAGEPAAIDYQAMPAA  370
            D GFI  +++ +TN+EH++A+GD AG  +LAHK+S E+K+AAEVI+G+ + ID+QAMP  
Sbjct  324  DQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFV  383

Query  371  VFTDPEIGTVGMTESEAAEAGFDPVTGKFPFRASGRALTTGDADGFVKVVADQESGYLLG  430
            +F+DPE++  G+TE EA E G++ V+++FPF+A++RAL+ +DADGFV+VVA++++  +LG
Sbjct  384  IFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLG  443

Query  431  ASIVGPeaseliaelglaielgatleDVAATVHTHPTLSESVMEAAENALGHAIHTLNR  489
              +VGPE S LIAE  +AIE GA  ED++ T+H+HPTL+E++MEAAE  +GHA H LN+
Sbjct  444  VQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

286) PEPE_1770 in NC_008525


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  318 bits (1192),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 200/461 (44%), Positives = 325/461 (71%), Gaps = 3/461 (0%)

Query  10   VDTLIIGSGPGGYVAAIRAAELGQKVVIVERDYIGGVCLNVGCIPSKALIQAGHLYSTLQ  69
            VD L+IG+G+GGYVAAIRAA+LG+KVV+V++  +GGVCLN GCIPSKALI A++    ++
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   HGNPFGVSVS-ESKIDFTKTQEWKQNQVVNKLTGGVELLLKKHKVAIVRGEAYFNDNETV  128
            H+N  G+ VS E ++D      WK+  +VNKLT+G+  LLK + V ++ GEAY+ + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  NVINGDDSHVYRFKRALIATGSRPVEIPHFKFSG-RVIDSTGALNLKDVPEHLIIIGGGV  187
            ++   D+ +++ +K  ++A GS PVE+    F   R+I ST AL+L++VP+HL+++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  IGAELAGAYMNLGSKITIIEGLDHILNGFDGELIQPVLNNFKKNGVEIVTEATAVEANQT  247
            IG EL+ AY ++G+K+TI+EG D IL+G D  L + V  ++K  G+ ++T+A    +++T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  DKDVTVTYEADGTTKTVNGDYCLVSVGRRPNTDQLGLNNTNIKLSKRGLIEVNDSMQTSV  307
            + +V V  + DG    ++ DYCLVS+GR+PNT+++GL+N  + L  +G+I +N+  QT++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KHIYAIGDVVAGPALahkasfeakvaaaaMGGEDAHDTHYVLPAVAYTNIELATVGETPQ  367
             H+YAIGD  +G  LAHKAS+EAK+AA  ++G+++      +P V +++ E+A  G T +
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  SIAEKKLDAKSSKFPFAASGRAMTMDQTEGFIRLITDNPTGGIIGAQIVGPEASNLISEL  427
               EK  ++ SS+FPF A++RA+++ +++GF+++++++ T  ++G Q+VGPE S+LI+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  TLAIENGLTIKDIELTIHPHPTLGEEIMDAAELAAGLPIHV  468
             +AIE G    D+ LTIH+HPTL E +M+AAE   G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

287) EHR_12850 in NC_018081


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  317 bits (1188),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 209/461 (46%), Positives = 336/461 (73%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQESL  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSTLFGVT-SENVTLDFAKTQDWKENKVVKTLTSGVGFLLKKHKVETIEGEAFFVDDHTL  128
            ++   G+  S +V +D +    WK+  +V+ LT G+  LLK + VE I GEA++ + H  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGG-RVLDSTGGLALKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGAEVTILEGSPQILPTYEKDMVKLVEDDFKKKGVTIVTNAMAKEAVDN  247
            IG ELG AYA++GA VTILEGS  IL+  +  + K V  ++K  G+T++T+A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYTVDGKEETVTADYVMVTVGRRPNTDDMGLEQAGVEVGERGLIPVDQQGRTNV  307
            GD V V   VDGKEE +  DY +V++GR+PNT+ +GLE+ GV ++++G+I ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PNIFAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTIK  367
             +++AIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T K
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  EAKEAGIEATAYKFPFSGNGRALSLAKTEGFIRLVTTNEDNviigaqiggvgaSDMVSEL  427
            EAKE G E+ + +FPF +N+RALS++ ++GF+++V+ ++ + ++G Q+ G   S +++E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDAAELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E  M+AAE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

288) Rleg_6500 in NC_012854


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  317 bits (1187),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 207/463 (45%), Positives = 315/463 (69%), Gaps = 10/463 (2%)

Query  8    LLVIGAGPGGYVCAIRAGQLGVDTVIVEAGKPGGTCLTVGCIPSKALIHAAEEFDVAQKM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+ +  GG CL  GCIPSKALI A+E      K 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER----VKH  97

Query  68   LAGKNPMGIRVEGA-SIDLMRTIAWKDGIVGRLTTGVSGLLQKARVKIVHGRAHFRDGKT  126
            +   N MG++V G   +D+   + WKDGIV +LT G+  LL+   V ++ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGQQIIRAETVVIATGSDPVELANLPFGG-RVMSSTEALSLTELPKKLVVVGGG  185
              +  E  +QI+    +++A GS PVEL ++PF+  R++SSTEAL L E+P+ LVVVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFSKMGSDVTIVEATPQVLPQYDAELVRPVMRKLTEGGIRVLTGAKAIGLAD  245
            YIGLELGTA++K G+ VTI+E++  +L+  D+ L + V R L E GI V+T+A   G  +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  NGEALIVET-ADGRRETLPADRILVTVGRRPRTAGSGLEELD--LDRAGPYLRIDDRCRT  302
             G+ + V+   DG+ E +  D  LV++GR+P T+  GLE+++  LD  G +++I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  303  SMRGIYAIGDITGEPMLAHRAMAQGEMVAEIMAGKKRAWDKRCIPAICFTDPEIVSAGLS  362
            ++  +YAIGD +G  +LAH+A  ++ + AE+++G++   D + +P + F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PAEAKAQGYEIRTGQFPFSANGRAMTMLSEEGFVRVVARADTNLVLGLQAVGAGVSELSA  422
              EAK +GYE  +++FPF AN+RA+++   +GFV+VVA  +T+ VLG+Q VG+ VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  VFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALKALGSALHI  465
               +AIE GA  ED++ TIHAHPT +E++MEAA   +G A H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

289) lpdV in NC_008381


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  317 bits (1190),  Expect = 7e-88, Method: Compositional matrix adjust.
 Identities = 204/463 (45%), Positives = 315/463 (69%), Gaps = 10/463 (2%)

Query  8    LLVIGAGPGGYVCAIRAGQLGVDTVIVEAGKPGGTCLTVGCIPSKALIHAAEEFDATQKM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+ +  GG CL  GCIPSKALI A+E      K 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE----RVKH  97

Query  68   LAGKNPMGIRVEGA-SIDLGRTIAWKDGIVGRLTSGVSGLLQKARVKIVHGRAHFRDGKT  126
            +   N MG++V G   +D+   + WKDGIV +LT G+  LL+   V ++ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGQQIIRAETVVIATGSDPVELSNLPFGG-RVISSTEALSLTELPKKLVVVGGG  185
              +  E  +QI+    +++A GS PVEL ++PF+  R+ISSTEAL L E+P+ LVVVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFSKMGSDVTVVEATPQVLPQYDAELVRPVMRKLTEGSIRLLTGAKAIGLAD  245
            YIGLELGTA++K G+ VT++E++  +L+  D+ L + V R L E +I ++T+A   G  +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  NGEALIVEA-ADGRRESLPADRILVTVGRRPRTAGSGLEELD--LDRAGPYLRIDDRCRT  302
             G+ + V+   DG+ E +  D  LV++GR+P T+  GLE+++  LD  G +++I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  303  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIIAGKKRAWDKRCIPAICFTDPEIVSAGLS  362
            ++  +YAIGD +G  +LAH+A  ++ + AE+I+G++   D + +P + F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PADAKAQGYEIRTGQFPFSANGRAMTMLSEEGFVRIVARADTNLVLGLQAVGAGVSELSA  422
              +AK +GYE  +++FPF AN+RA+++   +GFV++VA  +T+ VLG+Q VG+ VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  AFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALKALGSALHI  465
               +AIE GA  ED++ TIHAHPT +E++MEAA   +G A H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

290) NJ7G_0008 in NC_018224


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  317 bits (1190),  Expect = 8e-88, Method: Compositional matrix adjust.
 Identities = 208/482 (44%), Positives = 335/482 (70%), Gaps = 28/482 (5%)

Query  13   LVIGAGPAGYVAAIRAGQLDLDVTLVEKDAYGGTCLNYGCIPSKALITATDIAHEAASAE  72
            LVIGAG++GYVAAIRA+QL+  V LV+K   GG CLN GCIPSKALI+A++   +   A+
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN  102

Query  73   EMGIH--ADPAIDLAGMMDWKDGVVDQLTSGVEKLCKANQVNLLEGTAHFADENTVRVSH  130
             MG+   ++  +D++ ++ WKDG+V++LT G+  L K+N V+++ G A +++ +  ++  
Sbjct  103  TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI  162

Query  131  SGEGQGSETLEFEHAIVATGSRPIQIPNFEFDDEPVLDSKQALALDSVPDSLVVVGAGYI  190
             +E Q    + + + I+A GS P+++ +  FD+  ++ S +AL L+ VP+ LVVVG+GYI
Sbjct  163  EDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  191  GMELAGVFAKLGTDVTVVEMLDSILPGYDDDLKRPVKQRATDLGIDFEFGYTASDWDKRE  250
            G+EL+  +AK+G+ VT++E  D+IL+G D  L + VK++  ++GI               
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--------------  265

Query  251  DGGIRVIADP---ADEVTADGGSAEAVADERLEL-DTEKVLVAVGRQPVSDTLDLAEAGV  306
                 VI+D+   ++E T+D  + +   D + E+ + +  LV++GR+P ++ ++L + GV
Sbjct  266  -----VITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGV  320

Query  307  ETDDRGFIETDSRARTNIEHIFAVGDVAGEPMLAHKGSAEGQVAAEVIAGEPAAIDHQAM  366
              DD+GFI  +++ +TNIEH++A+GD AG  +LAHK+S E+++AAEVI+G+ + ID QAM
Sbjct  321  VLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAM  380

Query  367  PAAVFTDPEIATVGMTEPEAEDAGFETVTGQFPLRASGRALTTGDSDGFVKIVADDADGY  426
            P  +F+DPE+A  G+TE EA + G+ETV+++FP++A++RAL+ +D+DGFV++VA+     
Sbjct  381  PFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKR  440

Query  427  VLGAAIVGPeaseliaelglaielgatleDVASTVHTHPTLSEAVMEAAENALGHAIHTL  486
            VLG  +VGPE S LIAE  +AIE GA  ED++ T+H+HPTL+E++MEAAE  +GHA H L
Sbjct  441  VLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

Query  487  NR  488
            N+
Sbjct  501  NK  502

291) BH0216 in NC_002570


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  316 bits (1185),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 192/435 (45%), Positives = 306/435 (71%), Gaps = 7/435 (1%)

Query  22   YTAAIRLGQLGKSVVLIEKNQLGGVCLNRGCIPSKALIQMAEKFDELTHLKEMGVELPGK  81
            Y AAIR +QLGK VVL++K +LGGVCLNRGCIPSKALI  +E+  ++ H + MG+ ++G 
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGE  111

Query  82   PASIDLHKWQKWKQEITTKLNTGIHQLCQQNGVTVVTGEAHFLSSHRVGVETGNAFDVYK  141
               +D+    KWK+ I  KL  GI+ L + NGV V++GEA +  +H   +   +  +++ 
Sbjct  112  -VQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFS  170

Query  142  FEHAIVATGSSP---RSLPFAEVDHTYILDSTSALELTEVPRSLSIVGGGYIGMELGLAF  198
            + + I+A GS P   +S+PF   D+  I+ ST AL+L EVP  L +VGGGYIG+ELG A+
Sbjct  171  YKDLILAIGSLPVELKSMPF---DQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAY  227

Query  199  AKLGSAVTIVEMSPHILPATAPHISREVLNKAEKLGVTIKSSTSVEHLTVNDGYVELIVQ  258
            AK+G+ VTI+E S  IL++T P +++ V      +G+T+ + + V+     ++ V++ VQ
Sbjct  228  AKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQ  287

Query  259  SNGEQETLQSEKALMTVGRSPNTKGLGLEQVGVFFNEDGTLPINEECRTNIDHIFAIGDV  318
             +G +E +Q +  L+++GR PNT  +GLE++GV ++++G + IN+ C+TNI+H++AIGD 
Sbjct  288  VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDC  347

Query  319  TEGPALAHKASKQGIVAAEVIGGLPSAIDSSYIPYVVFTDPQIAGVGLTAKQAQEQGHRV  378
            + G  LAHKAS ++ +AAEVI+G  S ID   +P+V+F+DP++A  GLT K+A+E+G   
Sbjct  348  AGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYET  407

Query  379  KTARFPFQANGLALVASKPDGFAEVIVDEESHLLLGFHIVGADASNLIGEGVLALELGAR  438
             ++RFPFQAN+ AL  S +DGF +V+ + ++  +LG ++VG++ S+LI+E+V+A+E GA 
Sbjct  408  VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGAN  467

Query  439  VEDVALTVHPHPTFS  453
             ED++LT+H+HPT++
Sbjct  468  AEDLSLTIHAHPTLP  482

292) ENT_07990 in NC_021023


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  316 bits (1185),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 206/461 (45%), Positives = 339/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQEAQ  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++ +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSSTFGVTAKG-VELDFAKTQDWKDNTVVKSLTSGVGMLLKKHKVEIIEGEAFFVDENTL  128
            +++T G+   G V++D +    WKD  +V+ LT G+  LLK + VE+I GEA++ + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIVATGSRPIEIPGFKFGG-RVLDSTGGLNLKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L+L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGSEVTILEGSPSILPTYEKDMVKVVTDDFKKKNVTIVTSAMAKEAVDN  247
            IG ELG AYA++G+ VTILEGS +IL+  +  + K V  ++K   +T++T A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYEVNGKEESVEADYVMVTVGRRPNTDDLGLEQAGVEIGERGLIPVDNQGRTNV  307
            GD V V  +V+GKEE ++ DY +V++GR+PNT+ +GLE+ GV ++++G+I ++N+ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KNIFAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTVa  367
             +++AIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  eakeagieakgYKFPFAGNGRAISLDKTEGFMRLVTTVEDNVIIGAQIAGVGASDMISEL  427
            EAKE G E+ + +FPF +N+RA+S+  ++GF+++V+  + + ++G Q+ G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDTAELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E  M++AE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

293) EFD32_1168 in NC_018221


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  316 bits (1184),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 206/461 (45%), Positives = 340/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQEAQ  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++ +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSSTFGVTAKG-VELDFAKTQDWKDNTVVKSLTGGVGMLLKKHKVEIIEGEAFFVDENTL  128
            +++T G+   G V++D +    WKD  +V+ LT+G+  LLK + VE+I GEA++ + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIVATGSRPIEIPGFKFGG-RVLDSTGGLNLKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L+L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGSEVTILEGSPSILPTYEKDMVKVVTDDFKKKNVTIVTSAMAKEAVDN  247
            IG ELG AYA++G+ VTILEGS +IL+  +  + K V  ++K   +T++T A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYEVNGKEESVEADYVMVTVGRRPNTDDLGLEQAGVEIGERGLIPVDNQGRTNV  307
            GD V V  +V+GKEE ++ DY +V++GR+PNT+ +GLE+ GV ++++G+I ++N+ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KNIFAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTVa  367
             +++AIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  eakeagieakgYKFPFAGNGRAISLDKTEGFMRLVTTVEDNVIIGAQIAGVGASDMISEL  427
            EAKE G E+ + +FPF +N+RA+S+  ++GF+++V+  + + ++G Q+ G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDTAELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E  M++AE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

294) lpd in NC_017316


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  316 bits (1184),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 206/461 (45%), Positives = 340/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQEAQ  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++ +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSSTFGVTAKG-VELDFAKTQDWKDNTVVKSLTGGVGMLLKKHKVEIIEGEAFFVDENTL  128
            +++T G+   G V++D +    WKD  +V+ LT+G+  LLK + VE+I GEA++ + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIVATGSRPIEIPGFKFGG-RVLDSTGGLNLKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L+L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGSEVTILEGSPSILPTYEKDMVKVVTDDFKKKNVTIVTSAMAKEAVDN  247
            IG ELG AYA++G+ VTILEGS +IL+  +  + K V  ++K   +T++T A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYEVNGKEESVEADYVMVTVGRRPNTDDLGLEQAGVEIGERGLIPVDNQGRTNV  307
            GD V V  +V+GKEE ++ DY +V++GR+PNT+ +GLE+ GV ++++G+I ++N+ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KNIFAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTVa  367
             +++AIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  eakeagieakgYKFPFAGNGRAISLDKTEGFMRLVTTVEDNVIIGAQIAGVGASDMISEL  427
            EAKE G E+ + +FPF +N+RA+S+  ++GF+++V+  + + ++G Q+ G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDTAELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E  M++AE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

295) pdhD in NC_019770


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  316 bits (1185),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 206/461 (45%), Positives = 339/461 (74%), Gaps = 3/461 (0%)

Query  10   LDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQEAQ  69
            +D +VIGAG+GGYVAAIRAA++G+KV ++++  +GGVCLN GCIPSKALI+A+++ ++ +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   DSSTFGVTAKG-VELDFAKTQDWKDNTVVKSLTSGVGMLLKKHKVEIIEGEAFFVDENTL  128
            +++T G+   G V++D +    WKD  +V+ LT G+  LLK + VE+I GEA++ + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  RVIHPDSAQTYSFNNAIVATGSRPIEIPGFKFGG-RVLDSTGGLNLKEVPKKFviigggv  187
            ++   D  Q +S+++ I+A GS P+E+ +  F+  R++ ST +L+L+EVP+ +V++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igaelggaYANLGSEVTILEGSPSILPTYEKDMVKVVTDDFKKKNVTIVTSAMAKEAVDN  247
            IG ELG AYA++G+ VTILEGS +IL+  +  + K V  ++K   +T++T A+ + + + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  GDSVTVKYEVNGKEESVEADYVMVTVGRRPNTDDLGLEQAGVEIGERGLIPVDNQGRTNV  307
            GD V V  +V+GKEE ++ DY +V++GR+PNT+ +GLE+ GV ++++G+I ++N+ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  KNIFAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTVa  367
             +++AIGD   G  LAHKASYEAKIAAE ISG++  +D++AMP V F+DPE+A  G+T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  368  eakeagieakgYKFPFAGNGRAISLDKTEGFMRLVTTVEDNVIIGAQIAGVGASDMISEL  427
            EAKE G E+ + +FPF +N+RA+S+  ++GF+++V+  + + ++G Q+ G   S +I+E 
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  428  ALAIESGMNAEDIALTIHPHPSLGEITMDTAELALGLPIHI  468
             +AIE+G NAED++LTIH+HP+L E  M++AE  +G + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

296) LGMK_00040 in NC_015734


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  312 bits (1171),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 204/470 (44%), Positives = 335/470 (72%), Gaps = 4/470 (0%)

Query  2    VVGAQARDVDTIIIGSGPGGYVAAIRAAELGQKVTIIERDEIGGVCLNIGCIPSKALINV  61
            + G   + VD ++IG+G+GGYVAAIRAA+LG+KV ++++ E+GGVCLN GCIPSKALI+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   GHHYREAISETPFGLE-TENVTLDWSKTQSWKQNTVVNTLTSGVKLLLKKHHVDIIKGEA  120
            +++ ++       GL  + +V +D +    WK + +VN LT G++ LLK + V++I GEA
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  TFNDNETVNIVQDDGHELLQFNNAIIATGSRPIEIPSMPFGD-RIIDSTGALSLEQIPEK  179
             + + +  +I  +D ++++ +++ I+A GS P+E+ SMPF++ RII ST AL L+++P+ 
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  180  LiivgggvigselggvYANLGTKVTIIEGLDHTLNGFDHEMTKPVLDDFKKQGGEVVTSA  239
            L++VGGG IG ELG  YA++G+KVTI+EG D  L+G D  +TK V  ++K  G  V+T A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  240  TAKSAVQTADHVTLNYEVDGKEQSVTGDYLLVAVGRRANTDAIGLNNTDVKLTERGVIDV  299
              +++ +T+D+V ++ +VDGKE+ +  DY LV++GR++NT+ IGL+N +V L ++G I +
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  300  AENMQTRVPHIFAIGDITAGPQLAHKASFQGKIAAAAISGDKQARDLHYSLPAVAYTQFE  359
             ++ QT + H++AIGD ++G  LAHKAS+++KIAA  ISG++   D++ ++P V +++ E
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPE  389

Query  360  LATTGEDLETIKSDNLEVKISKFPFAGNGRAISMDDTTGFIRLISDKKTNALLGAQIVGP  419
            +A TG      K    E   S+FPF +N+RA+S+ D+ GF++++++K+T+ +LG Q+VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  420  SASDLISELSLAIENGLTTNDISLTIHPHPTLGEAIMDTAELADGLPIHI  469
              S LI+E  +AIE G  ++D+SLTIH+HPTL E++M++AE   G + H+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

297) LKI_02935 in NC_014136


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  312 bits (1171),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 204/470 (44%), Positives = 335/470 (72%), Gaps = 4/470 (0%)

Query  2    VVGAQARDVDTIIIGSGPGGYVAAIRAAELGQKVTIIERDEIGGVCLNIGCIPSKALINV  61
            + G   + VD ++IG+G+GGYVAAIRAA+LG+KV ++++ E+GGVCLN GCIPSKALI+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   GHHYREAISETPFGLE-TENVTLDWSKTQSWKQNTVVNTLTSGVKLLLKKHHVDIIKGEA  120
            +++ ++       GL  + +V +D +    WK + +VN LT G++ LLK + V++I GEA
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  TFNDNETVNIVQDDGHELLQFNNAIIATGSRPIEIPSMPFGD-RIIDSTGALSLEQIPEK  179
             + + +  +I  +D ++++ +++ I+A GS P+E+ SMPF++ RII ST AL L+++P+ 
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  180  LiivgggvigselggvYANLGTKVTIIEGLDHTLNGFDHEMTKPVLDDFKKQGGEVVTSA  239
            L++VGGG IG ELG  YA++G+KVTI+EG D  L+G D  +TK V  ++K  G  V+T A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  240  TAKSAVQTADHVTLNYEVDGKEQSVTGDYLLVAVGRRANTDAIGLNNTDVKLTERGVIDV  299
              +++ +T+D+V ++ +VDGKE+ +  DY LV++GR++NT+ IGL+N +V L ++G I +
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  300  AENMQTRVPHIFAIGDITAGPQLAHKASFQGKIAAAAISGDKQARDLHYSLPAVAYTQFE  359
             ++ QT + H++AIGD ++G  LAHKAS+++KIAA  ISG++   D++ ++P V +++ E
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPE  389

Query  360  LATTGEDLETIKSDNLEVKISKFPFAGNGRAISMDDTTGFIRLISDKKTNALLGAQIVGP  419
            +A TG      K    E   S+FPF +N+RA+S+ D+ GF++++++K+T+ +LG Q+VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  420  SASDLISELSLAIENGLTTNDISLTIHPHPTLGEAIMDTAELADGLPIHI  469
              S LI+E  +AIE G  ++D+SLTIH+HPTL E++M++AE   G + H+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

298) JCM7686_3331 in NC_022041


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  311 bits (1167),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 200/461 (44%), Positives = 307/461 (67%), Gaps = 9/461 (1%)

Query  8    LLVIGAGPGGYVCAIRAGQLGVDTVVVDPLPPGGTCLNMGCIPSKALIHAADEFHRIASL  67
            LLVIGAG+GGYV AIRA+QLG   V+VD    GG CLN GCIPSKALI A++   R+  +
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   SKAPEMGISASGA-QVDLGATVAWKDGIVERLNNGVSTLLRKANVRLIAGEATLRDGKTA  126
              A  MG+  SG  QVD+   V WKDGIV++L +G+ TLL+   V +I+GEA L ++  A
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  127  LVETPEGPVLIRAEAVVIATGSAPVELPALPFGG-RVMSSTEALALREVPKTLAVVGGGY  185
             +   +   ++    +++A GS PVEL ++PF+  R++SSTEAL L+EVP+ L VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  186  IGLELGTAFAKLGSEVTVLEAGPRILPQYDAELTRPVSQRLLALGVKVMTGARAGG---L  242
            IGLELGTA+AK+G+ VT+LE++  IL+  D+ LT+ V ++L  +G+ V+T+A   G    
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  243  SDQGALRVAVTDAAIEIAAEKILVTVGRRPRSREAGIEGLRLAMSGP-YLAVDGQCRTSM  301
            +D+  ++V V +    I  +  LV++GR+P +   G+E + + + +  ++ ++ +C+T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  302  RGVFAIGDVTGEPMLAHRAMAQGEMVAEIVAGHRRDWDHRAIPAVCFTDPEIVSVGLSPD  361
              V+AIGD +G  +LAH+A  ++ + AE+++G+    D +A+P V F+DPE+   GL+  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  362  EAQAAGHEVVTGLFPFAANGRAMTAGREDGFIRVTARKDSEEILGIQAVGAGISELAAGF  421
            EA+  G E V++ FPF AN+RA++ +  DGF++V A K++  +LG+Q VG+ +S L A  
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  422  ALALEMGARLGDLIGTIHAHPTRGEALHEACLKALGRALHI  462
             +A+E GA   DL  TIHAHPT  E+L EA    +G+A H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

299) C270_05890 in NC_018673


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  311 bits (1164),  Expect = 9e-86, Method: Compositional matrix adjust.
 Identities = 205/462 (45%), Positives = 328/462 (71%), Gaps = 4/462 (0%)

Query  10   IDTVIIGSGPGGYVAAIRAAELGQKVTLVERDNIGGVCLNIGCIPSKALINVGHHYREAI  69
            +D ++IG+G+GGYVAAIRAA+LG+KV LV++ ++GGVCLN GCIPSKALI+ +++ ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   SDTPFGLKTT-ETSLDWSKTQDWKQNTVVHALTSGVEMLLKKHQVEIIKGEATFNDNETI  128
                 GLK + E  +D +    WK + +V+ LT G+  LLK + VE+I GEA + + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  NVVQEDGHELFQFNNAIIATGSRPIEIPGFVFNG-RIIDSTGALSLQEIPKKLiivgggv  187
            ++  ED +++F +++ I+A GS P+E+ +  F+  RII ST AL LQE+P+ L++VGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igselggvYANLGTQVTIVEGLDHTLNGFDKEMTKPVLDDFKKQGGEIITSATAKSAVQT  247
            IG ELG  YA++G++VTI+EG D  L+G D  +TK V  ++K  G  +IT A  +++ +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  DDSVTLTYEVAGESQTVTGDYLLVAVGRHANTDNLGLNNTDVKLTDHGLIEIANNMQTSV  307
            +D V +  +V G  + +  DY LV++GR +NT+++GL+N +V L D+G+I I N+ QT++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIYAVGDITAGPQLAHKASFQGKIAAAAISGDKQARDLHYSLPAVAYTHFELATTGETP  367
             H+YA+GD ++G  LAHKAS+++KIAA  ISG++   D++ ++P V +++ E+A TG T 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYTGLTE  397

Query  368  ETAKSANLDVNIAKFPFAANGRAISMNDTVGFIRLISDKSTRALLGAQIVGPSASDLISE  427
              AK    +   ++FPF AN+RA+S++D+ GF++++++K+T+ +LG Q+VGP  S LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  428  LSLAIENGLTTTDISLTIHPHPTLGEAIMDTAELVDGLPIHM  469
              +AIE G  + D+SLTIH+HPTL E++M++AE V G + HM
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

300) Huta_1805 in NC_013158


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  310 bits (1163),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 200/459 (44%), Positives = 322/459 (71%), Gaps = 3/459 (0%)

Query  157  DVLIIGAGPGGYVAAIRAGQLGLDVTLVEDDAVGGTCLNYGCIPSKALIHGADIAYEAAN  216
            D+L+IGAG+GGYVAAIRA+QLG  V LV+   +GG CLN GCIPSKALI +++   +  +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  217  AEHLG--VSADPTVDIDQLTGWKDDVVDQLTGGVEQLCHAQGVTVVDGVAEFVNNRRATI  274
            A+ +G  VS++  VD+ ++  WKD++V++LT+G+  L  ++GV V+ G A + + + A I
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  275  TTDDGETAIDFGNAIVATGSRPIEIPDFPFDSEYVLDSRDALALDERPDSLVVIGAGYIG  334
              +D E  + + + I+A GS P+E+   PFD   ++ S +AL L+E P+ LVV+G+GYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  335  MELSTVFEKLGTDVTVVEMFDDVLSGYDDDISRLVRERAAEFGIDFRFGEMAASWEETDD  394
            +EL+T + K+G+ VT++E  D +LSG D  +++ V+ +  E+GI    + +  + E+T+D
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  395  GIVVHTEDEDGDRHSLEAEKVFVVGGREPVTDTANLQAAGIELDDDGFVKTDAQGRTTCE  454
             + VH +  DG  + ++ +  +V  GR P T+   L+  G+ LDD+GF+K + + +T  E
Sbjct  281  EVNVHVQ-VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  455  RIFAIGDVVGEPMLAHKASRegevaaeaiagePSVLDYQAMPAVVFTDPEVATVGMSEND  514
            +++AIGD  G  +LAHKAS E+ +AAE I+G+ SV+D+QAMP V+F+DPEVA  G++E++
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  515  ARDDGYYPVVGRMPLASNGRALTLGDTEGFVRIVADRRTELILGAQIVGPNASELIAEVA  574
            A++ GY  V +R P+ +N+RAL+++D++GFV++VA++ T  +LG Q+VGP+ S LIAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  575  LAIEMDARLSDIAETVHTHPTLSEAVMEAAANARGEAIH  613
            +AIE +A   D++ T+H+HPTL+E++MEAA    G+A H
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

301) Lreu_0634 in NC_009513


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  309 bits (1159),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 208/470 (45%), Positives = 329/470 (70%), Gaps = 13/470 (2%)

Query  8    DTVIVGGGPGGYVAAIRASELGQKVTLIDKGEPglggvclnvgcvPSKALIAAGHRYQET  67
            D +++G+G+GGYVAAIRA++LG+KV L+DK+E  LGGVCLN GC+PSKALI+A++R ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE--LGGVCLNRGCIPSKALISASERVKHI  98

Query  68   LDSSIYGIS-KTDAKLDFTKTQEWKDHKVVDRMIRGVKMLLKKHKVEIIDGEAILDNDHQ  126
             +++  G+    + ++D      WKD  +V+++  G++ LLK + VE+I GEA L + H 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  LRVIKPGPKQFMDNDNGRTITWKNLILATGSRPVEIPHFKFEG-RVIDSTGGLNLKEVPE  185
             ++          +D+ + ++ K+LILA GS PVE+    F+  R+I ST +L+L+EVP+
Sbjct  158  AKI--------KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  186  ELVVIGGGYIGTELAGAYADLGAHVTIIEGTDSILGGFDHDMVDIVVKNLEKKGVDIVTK  245
            +LVV+GGGYIG EL+ AYA +GA VTI+EG+D+IL+G D  +   V ++L   G+ ++T 
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  246  AMAKDSQQDENSVTVTYEVDGSEKSIKADYCMVSVGRKPNTDDFGLDMTNVKLNDRHQVI  305
            A+ +++++  + V V  +VDG E  I+ DYC+VS+GRKPNT+ +GL+   V L+D+  + 
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  306  VDEQGRTNVPGIWAIGDIVPGPALAHKAFFEAKTAAGAIAGKNTANDWVGVPMVCFADPE  365
            ++++ +TN+  + AIGD   G  LAHKA +EAK AA  I+G+N+  D  ++P V F+DPE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  366  LAQVGMTVEEAKDKGIDVSTAQFPFAGNARAVSLDAAEGFIRLIYTKDKKNVIGAQGVGP  425
            +A  G+T  EAK+KG +  +++FPF +NARA+S+  A+GF++++  K+ K V+G Q VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  426  GVSDLAGELSLIVNCGMNVEDVALTIHPHPTLNEPVQEAADIALGFPTHI  475
             VS L +E  + ++ G N ED++LTIH+HPTL EP+ EAA+  +G +TH+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

302) LAR_0611 in NC_010609


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  309 bits (1159),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 208/470 (45%), Positives = 329/470 (70%), Gaps = 13/470 (2%)

Query  8    DTVIVGGGPGGYVAAIRASELGQKVTLIDKGEPglggvclnvgcvPSKALIAAGHRYQET  67
            D +++G+G+GGYVAAIRA++LG+KV L+DK+E  LGGVCLN GC+PSKALI+A++R ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE--LGGVCLNRGCIPSKALISASERVKHI  98

Query  68   LDSSIYGIS-KTDAKLDFTKTQEWKDHKVVDRMIRGVKMLLKKHKVEIIDGEAILDNDHQ  126
             +++  G+    + ++D      WKD  +V+++  G++ LLK + VE+I GEA L + H 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  LRVIKPGPKQFMDNDNGRTITWKNLILATGSRPVEIPHFKFEG-RVIDSTGGLNLKEVPE  185
             ++          +D+ + ++ K+LILA GS PVE+    F+  R+I ST +L+L+EVP+
Sbjct  158  AKI--------KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  186  ELVVIGGGYIGTELAGAYADLGAHVTIIEGTDSILGGFDHDMVDIVVKNLEKKGVDIVTK  245
            +LVV+GGGYIG EL+ AYA +GA VTI+EG+D+IL+G D  +   V ++L   G+ ++T 
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  246  AMAKDSQQDENSVTVTYEVDGSEKSIKADYCMVSVGRKPNTDDFGLDMTNVKLNDRHQVI  305
            A+ +++++  + V V  +VDG E  I+ DYC+VS+GRKPNT+ +GL+   V L+D+  + 
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  306  VDEQGRTNVPGIWAIGDIVPGPALAHKAFFEAKTAAGAIAGKNTANDWVGVPMVCFADPE  365
            ++++ +TN+  + AIGD   G  LAHKA +EAK AA  I+G+N+  D  ++P V F+DPE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  366  LAQVGMTVEEAKDKGIDVSTAQFPFAGNARAVSLDAAEGFIRLIYTKDKKNVIGAQGVGP  425
            +A  G+T  EAK+KG +  +++FPF +NARA+S+  A+GF++++  K+ K V+G Q VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  426  GVSDLAGELSLIVNCGMNVEDVALTIHPHPTLNEPVQEAADIALGFPTHI  475
             VS L +E  + ++ G N ED++LTIH+HPTL EP+ EAA+  +G +TH+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

303) pdhD in NC_015697


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  309 bits (1159),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 208/470 (45%), Positives = 329/470 (70%), Gaps = 13/470 (2%)

Query  8    DTVIVGGGPGGYVAAIRASELGQKVTLIDKGEPglggvclnvgcvPSKALIAAGHRYQET  67
            D +++G+G+GGYVAAIRA++LG+KV L+DK+E  LGGVCLN GC+PSKALI+A++R ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE--LGGVCLNRGCIPSKALISASERVKHI  98

Query  68   LDSSIYGIS-KTDAKLDFTKTQEWKDHKVVDRMIRGVKMLLKKHKVEIIDGEAILDNDHQ  126
             +++  G+    + ++D      WKD  +V+++  G++ LLK + VE+I GEA L + H 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  LRVIKPGPKQFMDNDNGRTITWKNLILATGSRPVEIPHFKFEG-RVIDSTGGLNLKEVPE  185
             ++          +D+ + ++ K+LILA GS PVE+    F+  R+I ST +L+L+EVP+
Sbjct  158  AKI--------KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  186  ELVVIGGGYIGTELAGAYADLGAHVTIIEGTDSILGGFDHDMVDIVVKNLEKKGVDIVTK  245
            +LVV+GGGYIG EL+ AYA +GA VTI+EG+D+IL+G D  +   V ++L   G+ ++T 
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  246  AMAKDSQQDENSVTVTYEVDGSEKSIKADYCMVSVGRKPNTDDFGLDMTNVKLNDRHQVI  305
            A+ +++++  + V V  +VDG E  I+ DYC+VS+GRKPNT+ +GL+   V L+D+  + 
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  306  VDEQGRTNVPGIWAIGDIVPGPALAHKAFFEAKTAAGAIAGKNTANDWVGVPMVCFADPE  365
            ++++ +TN+  + AIGD   G  LAHKA +EAK AA  I+G+N+  D  ++P V F+DPE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  366  LAQVGMTVEEAKDKGIDVSTAQFPFAGNARAVSLDAAEGFIRLIYTKDKKNVIGAQGVGP  425
            +A  G+T  EAK+KG +  +++FPF +NARA+S+  A+GF++++  K+ K V+G Q VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  426  GVSDLAGELSLIVNCGMNVEDVALTIHPHPTLNEPVQEAADIALGFPTHI  475
             VS L +E  + ++ G N ED++LTIH+HPTL EP+ EAA+  +G +TH+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

304) lpdA2 in NC_014640


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  309 bits (1160),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 206/471 (44%), Positives = 318/471 (68%), Gaps = 10/471 (2%)

Query  2    SQITKTTTLLVIGGGPGGYVAAIRAGQLGVPTILVEGAQLGGTCLNIGCIPSKALIHAAE  61
            +++ K   LLVIG+G+GGYVAAIRA+QLG   +LV+ A+LGG CLN GCIPSKALI A+E
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE  93

Query  62   EFDKARHYAGKSALGISVSAPA-IDLAQTVAWKDGIVGKLTGGVAALLKKNGVEVVRGWA  120
               + +H    +++G+ VS+   +D+++ V WKDGIV KLT+G+ +LLK NGVEV+ G A
Sbjct  94   ---RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  RLLDGKTVEVDSGESGVIRIQCEHLLLAAGSEPTPLPSMPFGGM-VVSSTEALSPTSIPK  179
             L ++    +   +   I +   +L+LA GS P  L SMPF+   ++SSTEAL    +P+
Sbjct  151  YLTEAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  180  QLVVVGGGYIGLELGTVYRKLGAEVAVVEAQDRILPTYDAELTKPVAAALTKMGVDLHLG  239
            +LVVVGGGYIGLELGT Y K+GA V+++E+ D IL+  D+ LTK V   L  +G+ +  +
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  240  RKVLGLNGAGNAVRVQ-DAAGVETLLPADRVLIAVGRRPRTQDWGLESLQ--LDRKGNAL  296
              V G + +G+ V V+ +  G E ++  D  L+++GR+P T   GLE++   LD +G  +
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FI  328

Query  297  RIDDQCRTSMRDVWAIGDIAGEPMLAHRAMAQGEMVAELVAGKRRHFQPASIPAVCFTDP  356
            +I+++C+T++ +V AIGD AG  +LAH+A  ++ + AE+++G+   ++  ++P V F+DP
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  357  EVVVAGLSPNEAESAGLDCLTASFPFAANGRSMTLESTDGFVRVVARRDNHLILGWQAVG  416
            EV  +GL+ +EA   G + +++ FPF AN+R++++  +DGFV+VVA ++   +LG Q VG
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  417  RGVSELSTAFGQSLEMGATLEDVAGTIHAHPTLGEAVQEAALKALGHALHI  467
              VS L +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

305) BBR47_27590 in NC_012491


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  309 bits (1160),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 189/457 (42%), Positives = 319/457 (70%), Gaps = 6/457 (1%)

Query  22   YAAAIRLGQLGKSVVLIEKEVLGGVCLNRGCIPSKALIHTAGEYHKLNRLNKLGIQLPTG  81
            Y AAIR +QLGK VVL++K  LGGVCLNRGCIPSKALI ++     +++ N +G+++ +G
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKV-SG  110

Query  82   KATFHMPSWQTWKSSVVAQLNKGIDYLCQANGVTVVKGTATFLSSDRIG-VETGGDFETY  140
                +MP    WK ++V +L  GI  L ++NGV V+ G  ++L+  +I+ +   ++ + +
Sbjct  111  EVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAKIKIEDEEQIF  169

Query  141  KCKQAIIATGSRPFIPSFLKTDGEYILDSTDMLALDDVPETLAIIGGGYIGMELGMAFAK  200
              K+ I+A GS P     +  D   I+ ST+ L L++VP+ L ++GGGYIG+ELG A+AK
Sbjct  170  SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAK  229

Query  201  LGSQVTIIEASERILPQTAAHLSQEVLKQAKQLGMTVKIATKVEKAEVANGRVTLVCTSE  260
            +G++VTI+E+S+ IL+ T + L++ V ++ K++G+TV   + V+ +E + + V +    +
Sbjct  230  FGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNV--HVQ  287

Query  261  KNGSESITAHK-TLVTIGRVPNTGELGLAQAGVEMDERGYIPVTSTGSTNKAHIYAIGDV  319
             +G E I      LV+IGR PNTG +GL + GV +D++G+I + +   TN  H+YAIGD 
Sbjct  288  VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDC  347

Query  320  TPGPALAHRAAKQGIVAAEVIAGLPSSVDSPFVPYVIFTEPQIAGVGMTRDEAELQGYKV  379
            + G  LAH+A+ ++ +AAEVI+G  S +D   +P+VIF++P++A  G+T  EA  +GY  
Sbjct  348  AGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYET  407

Query  380  KAATFPYRANGRALAIDEGEGFAEVIVDQESHLLLGMHIVGADASNLIGEGVLALELAAR  439
             ++ FP++AN+RAL++ +++GF +V+ ++++  +LG+++VG++ S+LI+E+V+A+E +A 
Sbjct  408  VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGAN  467

Query  440  VEDVALTMHPHPTLSEVWLEAAEAVLGHAIHIVNKSK  476
             ED++LT+H+HPTL+E  +EAAE+V+GHA H++NK +
Sbjct  468  AEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

306) pdhD in NC_010162


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  309 bits (1157),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 209/455 (46%), Positives = 328/455 (73%), Gaps = 5/455 (1%)

Query  1    MKTY-DAIVIGAGPGGYPCAIRLAQLKQKVLCIEKENVGGVCLNWGCIPSKALISAAHLY  59
            +K Y D +VIGAG+GGY  AIR AQL +KV+ ++K ++GGVCLN+GCIPSKALISA++  
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  60   EKSQAGAAMGIKVSG-VELDANKMQDWKEGIVKKLTGGVGSLLKGNGADVVNGTATVVGP  118
               + + +MG+KVSG V++D   +  WK+GIV+KLT+G+ +LLKGNG +V++G A +  +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  119  KRVDVTRADGSVEQFEATKAIVIATGSTTIEIPTFKFDGDTIIGAKEAVSLRRIPKRlmv  178
             ++   + ++  + F + K +++A GS  +E+ +  FD   II++ EA+ L+ +P++L+V
Sbjct  156  -HIAKIKIEDEEQIF-SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  179  igggviglelgmvYQAFGAELIVVEALPELLTGVDPDCTKIVERKILKRGGTIHKNAKAL  238
            +GGG IGLELG  Y  FGA + ++E+   +L+G DP  TK V R +   G T+  +A   
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  239  GYEKQKDGSVGVKILADGKEQTIVVDTVLVAVGMRPSSKGLGLEKVGVTVDQRGFVPTDK  298
            G   + ++ V V +  DGKE+ I  D  LV++G +P++  +GLE++GV +D++GF+  ++
Sbjct  274  G-GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  299  FCRTNVPSIYAIGDVSGPPLLAHKATKEGEIAAEVIAGHKAEKDWVAIPGAIFTDPEIAT  358
             C+TN+  +YAIGD +G  LLAHKA+ E+ IAAEVI+G+++  D  A+P  IF+DPE+A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  359  VGLTEAEAKAKGLEVSIGKFPFSVLGKAMAMNETEGFVKIVADKKTKQVLGVHIVGPEAS  418
             GLTE EAK KG E   ++FPF   ++A+++++++GFV++VA+K+TK+VLGV++VGPE S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  419  TMISEASLSLEMAAFLEDLSLTIHPHPTLGESLME  453
            ++I+EA +++E +A  EDLSLTIH+HPTL E+LME
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLME  487

307) N134_03485 in NC_021872


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  309 bits (1158),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 208/470 (45%), Positives = 329/470 (70%), Gaps = 13/470 (2%)

Query  8    DTVIVGGGPGGYVAAIRASELGQKVTLIDKGEPglggvclnvgcvPSKALIAAGHRYQET  67
            D +++G+G+GGYVAAIRA++LG+KV L+DK+E  LGGVCLN GC+PSKALI+A++R ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE--LGGVCLNRGCIPSKALISASERVKHI  98

Query  68   LDSSIYGIS-KTDAKLDFTKTQEWKDHKVVDRMIRGVKMLLKKHKVEIIDGEAILDNDHQ  126
             +++  G+    + ++D      WKD  +V+++  G++ LLK + VE+I GEA L + H 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  LRVIKPGPKQFMDNDNGRTITWKNLILATGSRPVEIPHFKFEG-RVIDSTGGLNLKEVPE  185
             ++          +D+ + ++ K+LILA GS PVE+    F+  R+I ST +L+L+EVP+
Sbjct  158  AKI--------KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  186  ELVVIGGGYIGTELAGAYADLGAHVTIIEGTDSILGGFDHDMVDIVVKNLEKKGVDIVTK  245
            +LVV+GGGYIG EL+ AYA +GA VTI+EG+D+IL+G D  +   V ++L   G+ ++T 
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  246  AMAKDSQQDENSVTVTYEVDGSEKSIKADYCMVSVGRKPNTDDFGLDMTNVKLNDRHQVI  305
            A+ +++++  + V V  +VDG E  I+ DYC+VS+GRKPNT+ +GL+   V L+D+  + 
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  306  VDEQGRTNVPGIWAIGDIVPGPALAHKAFFEAKTAAGAIAGKNTANDWVGVPMVCFADPE  365
            ++++ +TN+  + AIGD   G  LAHKA +EAK AA  I+G+N+  D  ++P V F+DPE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  366  LAQVGMTIEEAKDKGIDVSTAQFPFAGNARAVSLDAAEGFIRLIYTKDKKNVIGAQGVGP  425
            +A  G+T  EAK+KG +  +++FPF +NARA+S+  A+GF++++  K+ K V+G Q VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  426  GVSDLAGELSLIVNCGMNVEDVALTIHPHPTLNEPVQEAADIALGFPTHI  475
             VS L +E  + ++ G N ED++LTIH+HPTL EP+ EAA+  +G +TH+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

308) LRI_1272 in NC_021494


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  308 bits (1153),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 207/470 (45%), Positives = 328/470 (70%), Gaps = 13/470 (2%)

Query  8    DTVIVGGGPGGYVAAIRASELGQKVTLIDKGEPglggvclnvgcvPSKALIAAGHRYQET  67
            D +++G+G+GGYVAAIRA++LG+KV L+DK+E  LGGVCLN GC+PSKALI+A++R ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE--LGGVCLNRGCIPSKALISASERVKHI  98

Query  68   LDSSIYGIS-KTDAKLDFTKTQEWKDHKVVDRMIRGVKMLLKKHKVEIIDGEAILDNDHQ  126
             +++  G+    + ++D      WKD  +V+++  G++ LLK + VE+I GEA L + H 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  LRVIKPGPKQFMDNDNGRTITWKNLILATGSRPVEIPHFKFEG-RVIDSTGGLNLKEVPE  185
             ++          +D+ + ++ K+LILA GS PVE+    F+  R+I ST +L+L+EVP+
Sbjct  158  AKI--------KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  186  ELVVIGGGYIGTELAGAYADLGAHVTIIEGTDSILGGFDHDMVDIVVKNLEKKGVDIVTK  245
            +LVV+GGGYIG EL+ AYA +GA VTI+EG+D+IL+G D  +   V ++L   G+ ++T 
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  246  AMAKDSQQDENSVTVTYEVDGSKKSIKADYCMVSVGRKPNTDDFGLDMTNVKLNDRHQVI  305
            A+ +++++  + V V  +VDG    I+ DYC+VS+GRKPNT+ +GL+   V L+D+  + 
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  306  VDEQGRTNVPGIWAIGDIVPGPALAHKAFFEAKTAAGAIAGKNTANDWVGVPMVCFADPE  365
            ++++ +TN+  + AIGD   G  LAHKA +EAK AA  I+G+N+  D  ++P V F+DPE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  366  LAQVGMTVEEAKDKGIDVSTAQFPFAGNARAVSLDAAEGFIRLIYTKDKKNVIGAQGVGP  425
            +A  G+T  EAK+KG +  +++FPF +NARA+S+  A+GF++++  K+ K V+G Q VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  426  GVSDLAGELSLIVNCGMNVEDVALTIHPHPTLNEPVQEAADIALGFPTHI  475
             VS L +E  + ++ G N ED++LTIH+HPTL EP+ EAA+  +G +TH+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

309) Hlac_0142 in NC_012029


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  307 bits (1150),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 202/476 (43%), Positives = 336/476 (71%), Gaps = 7/476 (1%)

Query  2    VVGDIATGTEVLVIGAGPGGYVAAIRAAQKGLDTTLVEKDAYGGACLNRGCIPSKALITG  61
            + G++    ++LVIGAG+GGYVAAIRAAQ G    LV+K   GG CLNRGCIPSKALI++
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SGLAHEAGNAESMGIH--ADPAVDMGKMVEWKDGVVDRLTGGVEKLCKANGVNLVPGTAS  119
            S    +  +A++MG+   ++  VDM  +V WKDG+V++LT+G+  L K+NGV++++G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FVDEHTARVAHGGQGQGSESIEFEHAIIATGSRPIQIPGFEFAEDHVWSSADALDADTVP  179
            + + H A++   ++ Q    + + + I+A GS P+++ +  F + ++ SS++AL+ + VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  DRLGIVGGGYIGMELATTYAKLGADVTVVEMLDDILDPYEDDVKRIVRKRAEELGVEFHF  239
            ++L +VGGGYIG+EL+T+YAK+GA VT++E  D IL   +  + + V+++  E+G+   +
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT-VI  267

Query  240  GEGASEWSEGADGGYLLHteteegeestYGADKILVAVGRQPVTDGLDVDNAGIETDDRG  299
             ++  + +E +++   +H + +  EE     D  LV++GR+P T+ ++++N G+  DD+G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEII-QCDYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  300  FIETDDRTRTAVEHIHAVGDVAGDPMLAHVASKEGIVAAEVIAGEPTALDQQAIPAAVFT  359
            FI  +++ +T +EH+ A+GD AG+ +LAH AS E+ +AAEVI+G+ + +D QA+P  +F+
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  360  DPEIGTVGMTEEEAEADGFDPVVGEMPFNASGRAMTTGHTEGFVRLVADDETGFVLGAQI  419
            DPE++  G+TE EA   G++ V +  PF+A++RA++ ++++GFV++VA+ +T  VLG Q+
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  420  VGPeaseliaeaalaieMGATLEDVAATVHTHPTLAEAVMEAAENARGQAIHTLNR  475
            VGPE S LIAEA +AIE GA  ED++ T+H+HPTL+E++MEAAE   G+A H LN+
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

310) WKK_06350 in NC_015759


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1147),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 199/462 (44%), Positives = 336/462 (73%), Gaps = 5/462 (1%)

Query  10   VGTVIIGSGPGGYVAAIRAAELGQNVTLIERDQIGGVCLNIGCIPSKALINVGHHYRETQ  69
            V+ ++IG+G+GGYVAAIRAA+LG++V L+++ ++GGVCLN GCIPSKALI+ +++ ++ +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EENPFGLTMTGKLDWQKTQA--WKQHQVVEKLTGGVAMLLKKHHVNIIKGEASFNDNETL  127
            + N  GL ++G ++ +  +   WK+  +V+KLT+G+  LLK + V++I GEA + + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  128  NVVQEDGHQLLQFDDCIISTGSRPIEIPSFKFGG-RIVDSTGALSLPEIPKHlivigggv  186
            ++  ED +Q++ + D I++ GS P+E+ S  F+  RI+ ST AL L E+P+HL+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  187  igselggAYANLGSKVTIIEGLDHTLNGFDAEMTKPVIKDFKEHGGEIFTSAMAKSATQT  246
            IG ELG AYA++G+KVTI+EG D  L+G D+ +TK V +++KE G  ++T A+ +++ +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  247  DQDVTLTFEVDGQEQTVTGDYLLVSVGRKANTDTLGLNNTDIKQGEHGLLETDDSMRTSV  306
            +++V +  +VDG+E+ +  DY LVS+GRK+NT+ +GL+N ++  +++G++  ++  +T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  307  PHIYAIGDIVAGPALAHKASFEGKVAAAAISGADNAHDIHYSLPSVAYTHIELASTGETP  366
             H+YAIGD  +G  LAHKAS+E+K+AA  ISG ++  D++ ++P V +++ E+A TG T 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYTGLTE  397

Query  367  DSVAANQLDAQIIKFPFAANGRALAMDAGVGFIRLITDKTTKAMLGAQIVGPGASDLISE  426
                 +  ++   +FPF AN+RAL++  + GF++++++K TK +LG Q+VGP  S LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  427  LSLAIENGLTSEDISLTIHPHPTLGEAIMDAAEVADGMGIHI  468
              +AIE G  +ED+SLTIH+HPTL E++M+AAE   G + H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

311) lpdA3 in NC_003047


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 314/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAADEYHRLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A++   +++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKGPLGLSLSAPA-IDLRRTIAWKDGIVGRLNGGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +S+   +D+   + WKDGIV +L +G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEAIVIATGSAPVELPDLPFGGS-VISSTQALALTDVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+   +ISST+AL L +VP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVTDGWGLEEID--LDHSGRFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P T+  GLE+I+  LD+ G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  VYAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIDVKIGQFPFQANGRAMTTLSEDGFVRVIARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +   ++FPFQAN+RA++    DGFV+V+A  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKTLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

312) lpdA3 in NC_020528


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 314/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAADEYHRLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A++   +++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKGPLGLSLSAPA-IDLRRTIAWKDGIVGRLNGGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +S+   +D+   + WKDGIV +L +G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEAIVIATGSAPVELPDLPFGGS-VISSTQALALTDVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+   +ISST+AL L +VP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVTDGWGLEEID--LDHSGRFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P T+  GLE+I+  LD+ G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  VYAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIDVKIGQFPFQANGRAMTTLSEDGFVRVIARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +   ++FPFQAN+RA++    DGFV+V+A  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKTLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

313) Sinme_2991 in NC_015590


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 314/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAADEYHRLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A++   +++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKGPLGLSLSAPA-IDLRRTIAWKDGIVGRLNGGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +S+   +D+   + WKDGIV +L +G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEAIVIATGSAPVELPDLPFGGS-VISSTQALALTDVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+   +ISST+AL L +VP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVTDGWGLEEID--LDHSGRFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P T+  GLE+I+  LD+ G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  VYAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIDVKIGQFPFQANGRAMTTLSEDGFVRVIARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +   ++FPFQAN+RA++    DGFV+V+A  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKTLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

314) SinmeB_2765 in NC_017322


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 314/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAADEYHRLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A++   +++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKGPLGLSLSAPA-IDLRRTIAWKDGIVGRLNGGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +S+   +D+   + WKDGIV +L +G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEAIVIATGSAPVELPDLPFGGS-VISSTQALALTDVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+   +ISST+AL L +VP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVTDGWGLEEID--LDHSGRFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P T+  GLE+I+  LD+ G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  VYAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIDVKIGQFPFQANGRAMTTLSEDGFVRVIARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +   ++FPFQAN+RA++    DGFV+V+A  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKTLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

315) C770_GR4Chr3065 in NC_019845


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 314/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAADEYHRLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A++   +++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKGPLGLSLSAPA-IDLRRTIAWKDGIVGRLNGGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +S+   +D+   + WKDGIV +L +G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEAIVIATGSAPVELPDLPFGGS-VISSTQALALTDVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+   +ISST+AL L +VP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVTDGWGLEEID--LDHSGRFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P T+  GLE+I+  LD+ G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  VYAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIDVKIGQFPFQANGRAMTTLSEDGFVRVIARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +   ++FPFQAN+RA++    DGFV+V+A  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKTLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

316) lpdV in NC_018700


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 314/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAADEYHRLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A++   +++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKGPLGLSLSAPA-IDLRRTIAWKDGIVGRLNGGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +S+   +D+   + WKDGIV +L +G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEAIVIATGSAPVELPDLPFGGS-VISSTQALALTDVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+   +ISST+AL L +VP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVTDGWGLEEID--LDHSGRFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P T+  GLE+I+  LD+ G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  VYAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIDVKIGQFPFQANGRAMTTLSEDGFVRVIARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +   ++FPFQAN+RA++    DGFV+V+A  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKTLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

317) lpdA3 in NC_017325


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  306 bits (1146),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 314/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAADEYHRLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A++   +++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKGPLGLSLSAPA-IDLRRTIAWKDGIVGRLNGGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +S+   +D+   + WKDGIV +L +G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEAIVIATGSAPVELPDLPFGGS-VISSTQALALTDVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+   +ISST+AL L +VP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVTDGWGLEEID--LDHSGRFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P T+  GLE+I+  LD+ G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  VYAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIDVKIGQFPFQANGRAMTTLSEDGFVRVIARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +   ++FPFQAN+RA++    DGFV+V+A  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKTLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

318) SCD_n00853 in NC_022357


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  305 bits (1142),  Expect = 7e-84, Method: Compositional matrix adjust.
 Identities = 193/465 (42%), Positives = 320/465 (69%), Gaps = 3/465 (0%)

Query  130  DVVVLGAGPGGYTAAFRAADLGKKVVLIERYPSLGGVCLNVGCIPSKALLHVAKVISEAE  189
            D++V+GAG+GGY AA+RAA+LGKKVVL+++ + LGGVCLN GCIPSKAL+  +  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  190  EVSHHGVSF-GKPKIDIDQIRAWKESVVAKLTGGLGVLAKQRNIQVIHGVGQFVAPHHIR  248
            + +  G+   G  ++D+ ++  WK+++V KLT+G+  L K   ++VI G + +  +H  +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  249  VETAEGEVTVTFDSAIIAAGSQAVKIPTFPIDP-RVIDSTGALQLADVPKRMLVIGGGII  307
            +   + E   ++   I+A GS +V + + P+D  R+I ST ALQL +VP++++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  308  GLEMATVYYALGAKITVVERGPQLMPGADPDIVKPLLKRIEKRYEAILLNTSVAALEAKK  367
            GLE++T Y  +GAK+T++E +  +++G+DP + K + +++     +++ ++ V + E   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  368  EGILATFGGDNAPEPQLYDRVLVAVGRRPNGKLIGAENAGIRIDDQGFIPVDKQQRTNIP  427
            + +      D   E    D  LV++GR+PN   IG EN G+ +DDQGFI ++++ +TNI 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  428  HIFAIGDIVGQPMLAHKAVHEGKVAAEVIAGHKAAFDPSTIPSVAYTDPEVAWMGLTETE  487
            H++AIGD  G  +LAHKA  E+K+AAEVI+G+++ +D  ++P V ++DPEVA  GLTE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  488  AKAQGIAYEKASFPWAASGRALSIGRDEGITKLIVEKDTRRILGAGIVGSNAGELIAEAV  547
            AK +G     + FP  A++RALS++  +G+ +++ EK+T+R+LG  +VG++ + LIAEAV
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  548  LALEMGADAQDIGLTIHPHPTLSETLGFAAEMVEGTITDLYIKRK  592
            +A+E GA+A+D++LTIH+HPTL+E L  AAE V G  T++  K++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

319) lpdV in NC_018000


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  304 bits (1141),  Expect = 6e-84, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 311/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVAAIRAGQLGINTVVVEKAKAGGTCLNVGCIPSKALIHAAEEFHKLRAA  67
            LLV+GAG+GGYVAAIRA+QLG + V+V+KA  GG CLN GCIPSKALI A+E    ++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKSPLGLSLEAPA-IDLKRTIAWKDGIVGRLSSGVTGLLKKAGVKAVIGQARFVDGKT  126
             +    +GL + +   +D+   + WKDGIV +L+ G+  LLK  GV  + G+A + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETEIGVQRIRAEAIVIATGSVPVELPDLPFGGN-VISSTDALALKEVPQTLAVIGGG  185
              +  E   Q +    +++A GS+PVEL  +PF+ + +ISST+AL L+EVP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEAMDRVLPQYDADLSKPVMKRLGELGIEVFTRTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D +L+  D+ L+K V ++L E+GI V+T +  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVPAEKVLVTVGRRPVMEGWGLEEID--LDRSGKFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P     GLE+I+  LD  G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIIAGQKRSWDKRCIPAICFTDPEIVSAGLS  361
            ++  +YAIGD +G  +LAH+A  ++ + AE+I+GQ+   D + +P + F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIEVKIGQFPFQANGRAMTTLAEDGFVRVVARADNHLVLGIHAVGHAVSELSS  421
              EA+  G E   ++FPFQAN+RA++    DGFV+VVA  +   VLG++ VG  VS L +
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  AFALAIEMGARLEDIAGTIHAHPTQSEGFQEAAFKALGHALHI  464
               +AIE GA  ED++ TIHAHPT +E + EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

320) lpdA2 in NC_012587


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  303 bits (1137),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 313/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVCAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAAEEFHKLRAV  67
            LLV+GAG+GGYV AIRA+QLG + V+V+KA  GG CLN GCIPSKALI A+E   +++ +
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   ASGKSPLGLSLEAPA-IDLERTVAWKDGIVGRLNSGVTGLLKKAGVKAVIGQARFVDGKT  126
              +++ +GL + +   +D+   V WKDGIV +L  G+  LLK  GV  + G+A + ++  
Sbjct  99   KHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETEIGVQRIRAEAIVIATGSAPVELPDLPFGDN-VISSTEALALKEVPQTLAVIGGG  185
              +  E   Q +    +++A GS PVEL  +PF+++ +ISSTEAL L+EVP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEAMDRILPQYDADLSKPVMKRLGELGIDVFTRT--AAKRL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+GI V+T +   +   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLLAEENGRAFEVAAEKVLVTVGRRPVVEGWGLEEID--LDRSGKFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P     GLE+I+  LD  G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGQKRSWDKRCIPAVCFTDPEIVSAGLS  361
            ++  +YAIGD +G  +LAH+A  ++ + AE+++GQ+   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIEIKIGQFPFQANGRAMTTLAEDGFVRIVARADNHLVLGIHAVGHAVSELSS  421
              EA+  G E   ++FPFQAN+RA++    DGFV++VA  +   VLG++ VG  VS L +
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  AFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKGLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

321) Nit79A3_3071 in NC_015731


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  303 bits (1135),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 187/460 (41%), Positives = 328/460 (72%), Gaps = 2/460 (0%)

Query  125  DVVVLGAGPGGYTAAFRAADLGKKVVLIERYAALGGVCLNVGCIPSKALLHAAKVITEAE  184
            D++V+GAG+GGY AA+RAA+LGKKVVL+++ A LGGVCLN GCIPSKAL+ A+  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  185  DVESQGIAF-GKPQIDMDKLRTWKESVIgkltkglkalakQRKVEIVHGTGKFAMPHLIQ  243
            + ++ G+   G  Q+DM  +  WK++++ KLT G+++L K   VE++ G + ++ +H+ +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  244  VETTEGQKTISFEQCIIAAGSSVARIPGFPYDDPRLIDSTGALELKDVPKHMLVIGGGII  303
            +   + ++ +S+ + I+A GS    + + P+D+ R+I ST AL+L++VP+H++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  304  GLEMATVYSALGSKISVVEWMDQLIPGADPDLIKPLHRRIKKRYEAIYLKTKVTQIEAGE  363
            GLE++T Y+ +G+K++++E  D +++G+DP L K + R++K    ++   + V   E   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  364  SGLTVTFEGENAPEPQTYDRILMAVGRRPNGRAIGAEEIGIQVNERGFIPVDQQMRTNLP  423
              + V  + +   E    D  L+++GR+PN   IG E+IG+ ++++GFI ++++ +TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  424  HIFAIGDIVGEPMLAHKATYEGKLAAEIIAGHKAIFDARTIPSVAYTDPEIAWMGLTEKE  483
            H++AIGD  G  +LAHKA+YE+K+AAE+I+G+++++D +++P V ++DPE+A  GLTEKE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  484  AIKQGIDYEKASFPWAASGRAISMAREEGLTQLLLDKNTRRILGAGIVGINAGELIAETV  543
            A  +G +   + FP  A++RA+S++  +G+ Q++ +KNT+R+LG  +VG + + LIAE+V
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  544  LALEMGADMQDISLTIHPHPTLSETVLFAAEMAEGTITDL  583
            +A+E GA+ +D+SLTIH+HPTL+E ++ AAE   G  T++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

322) lpdA2 in NC_016812


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  302 bits (1131),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 206/463 (45%), Positives = 308/463 (67%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVCAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAAEEFHKLRTA  67
            LLV+GAG+GGYV AIRA+QLG + V+V+KA  GG CLN GCIPSKALI A+E    ++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKSPLGLSLEAPA-IDLKRTVAWKDGIVGRLNSGVTGLLKKAGVKAVIGQARFVDGKT  126
             +    +GL + +   +D+   V WKDGIV +L  G+  LLK  GV  + G+A + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETEIGVQRIRAEAIVIATGSAPVALPDLPFGDN-VISSTEALALKEVPQTLAVIGGG  185
              +  E   Q +    +++A GS PV L  +PF+++ +ISSTEAL L+EVP+ L V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEAMDRILPQYDADLSKPVMKRLGELGIEVFTRT--AAKRL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+GI V+T +   +   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLFAEENGRAFEVPAEKVLVTVGRRPVVEGWGLEEID--LDRSGKFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR+P     GLE+I+  LD  G FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  302  SMRGIHAIGDVTGEPMLAHRAIAQGEMVAEIIAGQKRSWDKRCIPAVCFTDPEIVSAGLS  361
            ++  + AIGD +G  +LAH+A  ++ + AE+I+GQ+   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARAAGIEIKIGQFPFQANGRAMTTLAEDGFVRIVARADNHLVLGIQAVGHAVSELSA  421
              EA+  G E   ++FPFQAN+RA++    DGFV++VA  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  AFALAIEMGARLEDIAGTIHAHPTQSEALQEAALKGLGHALHI  464
               +AIE GA  ED++ TIHAHPT +E+L EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

323) Smed_2829 in NC_009636


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  301 bits (1128),  Expect = 6e-83, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 311/463 (68%), Gaps = 11/463 (2%)

Query  8    LLVLGAGPGGYVTAIRAAQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAAEEYDKLRTA  67
            LLV+GAG+GGYV+AIRAAQLG + V+V+KA  GG CLN GCIPSKALI A+E    ++ A
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   ASGKSPLGLSLNAPA-IDLGRTIAWKDGIVGRLNSGVTGLLKKAGVKAVIGEGRFVDGKT  126
             +    +GL +++   +D+   + WKDGIV +L  G+  LLK  GV  + GE+ + ++  
Sbjct  102  NT----MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VDVETETGLQRIRAEALVIATGSAPIELPDLPFGGN-VISSTQALALTKIPETLAVVGGG  185
              +  E   Q +    L++A GS P+EL  +PF+ + +ISST+AL L  +P+ L VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTGTAAK--RL  243
            YIGLELGTA+AK+G+KVT+LE+ D IL+  D+ L+K V ++L E+G+ V+T++  +    
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SADRRGLFAEENGRAFEVPAEKVLVTVGRGPVTEGWGLEEID--LDRSGGFIRIDDQCRT  301
            ++D   +  + +G+   +  +  LV++GR P T   GLE+I+  LD   GFI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD-DQGFIKINNKCQT  336

Query  302  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGRKRSWDKRCIPAVCFTDPEIVGAGLS  361
            ++  +YAIGD +G  +LAH+A  ++ + AE+++G++   D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEEARTAGIDTRIGQFPFQANGRAMTTLSEDGFVRVVARADNHLVLGIQAVGHGVSELSA  421
              EA+  G +T  ++FPFQAN+RA++    DGFV+VVA  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  TFALAIEMGARLEDIAGTVHAHPTQSEAFQEAAFKALGHALHI  464
               +AIE GA  ED++ T+HAHPT +E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

324) lpdV in NC_021907


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  301 bits (1127),  Expect = 8e-83, Method: Compositional matrix adjust.
 Identities = 203/463 (44%), Positives = 315/463 (69%), Gaps = 10/463 (2%)

Query  8    LLVIGAGPGGYVCAIRAGQLGIDTVIVEAGKLGGTCLTVGCIPSKALIHAAEEFDATQKM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+ + LGG CL  GCIPSKALI A+E      K 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE----RVKH  97

Query  68   VASKNPMGIRVEGA-SIDLARTIAWKDGIVGRLTGGVSGLLQKVRVKIVHGRAHFRDGKT  126
            +   N MG++V G   +D++  + WKDGIV +LT+G+  LL+   V ++ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGQQIIRAETVVIATGSDPVELANLPFGG-RIISSTEALSLTELPKKLVVVGGG  185
              +  E  +QI+    +++A GS PVEL ++PF+  RIISSTEAL L E+P+ LVVVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGIAFSKMGSEVSVVEATPQVLPLYDAELVRPVMRKLSESGIRLLAGAKAMALAD  245
            YIGLELG A++K G+ V+++E++  +L+  D+ L + V R L E GI ++++A   +  +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  KGEALIVETS-DGRRETLPADRILVTVGRRPRTAGSGLEELD--LDRAGPYLRIDDQCRT  302
             G+ + V+   DG+ E +  D  LV++GR+P T+  GLE+++  LD  G +++I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  303  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGKKRGWDKRCIPAICFTDPEIVTVGLS  362
            ++  +YAIGD +G  +LAH+A  ++ + AE+++G++   D + +P + F+DPE+   GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PVEARAQGYEIRTAQFPFSANGRAMTMLSEEGFVRVVARADTNlvlglqavgvgvSELSA  422
              EA+ +GYE  +++FPF AN+RA+++   +GFV+VVA  +T+ VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  AFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALRALGSALHI  465
               +AIE GA  ED++ TIHAHPT +E++MEAA   +G A H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

325) lpdV in NC_017966


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  300 bits (1124),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 210/463 (46%), Positives = 316/463 (69%), Gaps = 10/463 (2%)

Query  8    LLVIGAGPGGYVCAIRAGQLGVDTVIVEAKKPGGTCLNVGCIPSKALIHAAEEFEKLVHM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+    GG CLN GCIPSKALI A+E   ++ H+
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   AEGQSPLGITATAP-KIDLARTVAWKDQIVGRLTGGVSGLLKKARVKVVQGHARFRDGKT  126
             ++++ +G+  ++  ++D++  V WKD IV +LT+G+  LLK   V V+ G+A + ++  
Sbjct  99   KHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGLQVIRAEAVVIATGSEPVELPFLPFGD-RVISSTEALALTSVPERFVVVGAG  185
              +  E   Q++    +++A GS PVEL  +PF++ R+ISSTEAL L  VP+++VVVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGTAYAKLGAKVTVVESQSRILPLYDAELTRPAAKRLEELGVEVLTGAKARGLSR  245
            YIGLELGTAYAK+GAKVT++E+   IL+  D+ LT+   ++L E+G+ V+T+A  +G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  GGDGLVVETQ-NGDEITLPADKILVTVGRRPATRGWGMEEL--VLDMQGPFISVGERCQT  302
             GD + V+ Q +G E  +  D  LV++GR+P T   G+E++  VLD QG FI + ++CQT
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  303  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIIAGHNRVWDKRCIPAVCFTDPEIVTAGLS  362
            ++  +YAIGD +G  +LAH+A  ++ + AE+I+G+N V D + +P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PDEAKRLGTEVKTAQFPFTANGRAMTKLGEQGFVRVVFRADNNLVLGIQATGQGVSELSA  422
              EAK  G E  +++FPF AN+RA++  + +GFV+VV   + + VLG+Q  G  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  AFALAIEMGARLEDIAGTIHAHPTQGEAFQEAALKGLGHALHI  465
               +AIE GA  ED++ TIHAHPT  E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

326) C269_06880 in NC_018631


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  299 bits (1121),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 198/453 (44%), Positives = 322/453 (72%), Gaps = 4/453 (0%)

Query  10   IDTVVIGSGPGGYVAAIRAAELGQKVTIIERDAIGGVCLNVGCIPSKALINVGHHYRtat  69
            +D +VIG+G+GGYVAAIRAA+LG+KV ++++  +GGVCLN GCIPSKALI+ +++ +   
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   attpfg-ltttgaELDWHQVQNWKQNKVVNTLTSGVEMLLKKHHVEIIKGEARFNDNATL  128
             +   G   +   ++D  +V +WK+  +VN LT G+  LLK + VE+I GEA + +    
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  NVLQEDGHELLQFNNAILATGSRPVELASMPFGG-RIIDSTGVLSLTDIPKKliivgggv  187
            ++  ED ++++ +++ ILA GS PVEL SMPF+  RII ST  L L ++P+ L++VGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igselggAYANLGTQVTIIEGLDHTLNGFDHEMTKPVLNDFTSRGGVIVTSAVAKSAEQT  247
            IG ELG AYA++G++VTI+EG D  L+G D  +TK V  ++   G  ++T A+ +++E+T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  TDDVTLTYEAAGKEQTITGDYLLVAVGRRVNTDDVGLNNTDIKLSDHGVIEVADNMQTSV  307
             D+V +  +  GKE+ I  DY LV++GR+ NT+ +GL+N ++ L D+G I + ++ QT++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  AHIYAIGDITAGPQLAHKASFQAKIAAGAIAEDPQAHDLHYSLPAVAYTNYELATTGETP  367
             H+YAIGD ++G  LAHKAS++AKIAA  I+ +    D++ ++P V +++ E+A TG T 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYTGLTE  397

Query  368  DSVKDQNLNAKISKFPFAGNGRAISMDETVGFIRLISDKETHALLGGQIVGPNASDLISE  427
               K++  ++  S+FPF +N+RA+S+ ++ GF++++++K+T  +LG Q+VGP+ S LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  428  LSLAIENGLTTNDISLTIHPHPTLGEAIMDTAE  460
              +AIE G  ++D+SLTIH+HPTL E++M++AE
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAE  490

327) lpdAc in NC_007764


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  299 bits (1121),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 201/463 (44%), Positives = 314/463 (68%), Gaps = 10/463 (2%)

Query  8    LLVIGAGPGGYVCAIRAGQLGIDTVIVEAGKPGGTCLTVGCIPSKALIHAAEEFDATQKM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+ +  GG CL  GCIPSKALI A+E      K 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE----RVKH  97

Query  68   LAGKNPMGVRVEGA-SIDLAKTIAWKDGIVGRLTAGVSGLLQKARVKIVHGRAHFRDGKT  126
            +   N MG++V G   +D++  + WKDGIV +LT G+  LL+   V ++ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGQQIIRAETVVIATGSDPVELANLPFGG-RVISSTEALSLTELPKKLVVVGGG  185
              +  E  +QI+    +++A GS PVEL ++PF+  R+ISSTEAL L E+P+ LVVVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGIAFSKMGSEVSVVEATPQVLPLYDAELVRPVMRKLSESGIRLLAGAKAMALAD  245
            YIGLELG A++K G+ V+++E++  +L+  D+ L + V R L E GI ++++A   +  +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  NGEALIVETS-DGRRETLPADRVLVTVGRRPRTAGSGLEELD--LDRAGPYLRIDDQCRT  302
             G+ + V+   DG+ E +  D  LV++GR+P T+  GLE+++  LD  G +++I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINNKCQT  336

Query  303  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGRKRGWDKRCIPAICFTDPEIVTVGLS  362
            ++  +YAIGD +G  +LAH+A  ++ + AE+++G++   D + +P + F+DPE+   GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PVEARAQGYEIRTAQFPFSANGRAMTMLSEEGFVRVVARADTNlvlglqavgvgvSELSA  422
              EA+ +GYE  +++FPF AN+RA+++   +GFV+VVA  +T+ VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  AFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALKALGNALHI  465
               +AIE GA  ED++ TIHAHPT +E++MEAA   +G+A H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

328) lpdA in NC_004463


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  299 bits (1121),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 198/463 (43%), Positives = 307/463 (67%), Gaps = 8/463 (1%)

Query  7    QLLVVGAGPGGYVCAIRAGQLGLDTVLVERGKLGGSCLNVGCIPSKAMIHVAEEFEKLVE  66
            +LLV+GAG+GGYV AIRA+QLG   VLV+++ LGG CLN GCIPSKA+I  +E    + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AADGKTPFGLT-AAQPALDFKQAIAWKDGIVHRLNNGVAALLRKAKVKIVQGHGRFRDGK  125
            A       GL  +++  +D  + + WKDGIV++L +G+ +LL+   V ++ G++ + ++ 
Sbjct  101  A----NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH  156

Query  126  TIVVETETGPKTIKAETVVIATGSAPVELPTLPFGG-RVISSTGALSLAEVPKSLVVVGG  184
               +  E   + +    +++A GS PVEL ++PF+  R+ISST AL L EVP+ LVVVGG
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  185  GYIGLELGTAFAKLGSKVAVVEAQDNILPLYDVELTAPIARRLTALGVEVLTGARALGLT  244
            GYIGLELGTA+AK+G+KV+++E+ D IL+  D  LT  + R+L  +G+ V+T+A   G  
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  245  AQGDGLRVETP-DGQERSLTADKILVTVGRTPVTEALGLEQLVLDMDGR-FIRIGQHCET  302
              GD + V+   DG+E  +  D  LV++GR P T  +GLE++ + +D++ FI+I + C+T
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  303  SMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIAAGMPRAWDKCCIPAICFTDPEIVSAGLS  362
            ++  +YAIGD +G  +LAH+A  ++ + AE+ +G     D   +P + F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PDEARRAGINIKVGQFPFAANGRAMTRHGEPGFVRVVARADNQRVLGIQALGQGVSELSA  422
              EA+  G +   ++FPF AN+RA++  +  GFV+VVA  + +RVLG+Q +G  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  AFGLAIEMGAVLQDIAGTIHAHPTLGEAIQEAAFKALGHAIHV  465
               +AIE GA  +D++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

329) pdhD in NC_014319


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  299 bits (1119),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 199/461 (44%), Positives = 324/461 (71%), Gaps = 4/461 (0%)

Query  2    VVGAQAREIDTVVIGSGPGGYVAAIRAAELGQKVTIIERDAIGGVCLNVGCIPSKALINV  61
            + G   + +D +VIG+G+GGYVAAIRAA+LG+KV ++++  +GGVCLN GCIPSKALI+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   GHHYRtatattpfg-ltttgaELDWHQVQDWKQNKVVNTLTSGVEMLLKKHHVEIIKGEA  120
            +++ +    +   G   +   ++D  +V  WK+  +VN LT G+  LLK + VE+I GEA
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  RFNDNATLNVLQEDGHELLQFNNAILATGSRPVELASMPFGG-RIIDSTGVLSLTDIPKK  179
             + +    ++  ED ++++ +++ ILA GS PVEL SMPF+  RII ST  L L ++P+ 
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  180  liivgggvigselggAYANLGTQVTIIEGLDHTLNGFDHEMTKPVLNDFTSRGGVIVTSA  239
            L++VGGG IG ELG AYA++G++VTI+EG D  L+G D  +TK V  ++   G  ++T A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  240  VAKSAEQTTDDVTLTYEAAGKEQTITGDYLLVAVGRRVNTDDVGLNNTDIKLSDHGVIEV  299
            + +++E+T D+V +  +  GKE+ I  DY LV++GR+ NT+ +GL+N ++ L D+G I +
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  300  ADNMQTSVAHIYAIGDITAGPQLAHKASFQAKIAAGAIAEDPQAHDLHYSLPAVAYTNYE  359
             ++ QT++ H+YAIGD ++G  LAHKAS++AKIAA  I+ +    D++ ++P V +++ E
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPE  389

Query  360  LATTGETPDSVKDQNLNAKISKFPFAGNGRAISMDETVGFIRLISDKETHALLGGQIVGP  419
            +A TG T    K++  ++  S+FPF +N+RA+S+ ++ GF++++++K+T  +LG Q+VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  420  NASDLISELSLAIENGLTTNDISLTIHPHPTLGEAIMDTAE  460
            + S LI+E  +AIE G  ++D+SLTIH+HPTL E++M++AE
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAE  490

330) pdhD3 in NC_015943


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  299 bits (1120),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 199/475 (42%), Positives = 327/475 (69%), Gaps = 10/475 (2%)

Query  2    VVGDVTTSTDVLVIGAGPGGYVAAIRAAQLGLDVTLVEKGAYGGACLNRGCIPSKALLNG  61
            + G+V    D+LVIGAG+GGYVAAIRAAQLG  V LV+K+  GG CLNRGCIPSKAL+++
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SDLASEAGQAEELG--IYADPTVALDEMMSWKDGIVDQLTSGIEQLCTAAGVNLLKGTAE  119
            S+   +  +A+ +G  + ++  V + E++ WKDGIV++LT GI  L  + GV+++ G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-  150

Query  120  FAAENKIRIVHQGEGQGSESLKFDHCIIATGSRPIEIPGFDFDDEPIVSSAGALNFETVP  179
            + +E  I  +   + +  + + + + I+A GS P+E+ +  FD+  I+SS+ AL+++ VP
Sbjct  151  YLTEAHIAKIKIEDEE--QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  AELVIVGAGYIGMELATVYSRLGSDVSVIETLEQALPGYQEDVASIVRQRAARLGVDFHF  239
             +LV+VG+GYIG+EL+T Y+++G+ V+++E  +  L+G +  ++  V+++   +G+    
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV--  266

Query  240  GYTADSWAESDGEAVLTAVPADEAAHDSDIELTADKILVAVGRRPVTDTLGIEAAGVETD  299
               +D+  ++ GE     V  +   ++ +  +  D  LV++GR+P T+ +G+E  GV  D
Sbjct  267  --ITDALVQG-GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD  323

Query  300  AQGFIPTDSRCRTNKEHIFAVGDVAGEPMLAHKGSKegevaaeviagepaavDYRALPAA  359
             QGFI  +++C+TN EH++A+GD AG  +LAHK+S E+ +AAEVI+G+ + +D++A+P  
Sbjct  324  DQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFV  383

Query  360  VFTDPEIGTVGLTEHEAANEGITPVTGEFQFQASGRALTANRTEGFVRIVAAKETERVIG  419
            +F+DPE++  GLTE EA + G   V++ F FQA++RAL+ + ++GFV++VA K+T RV+G
Sbjct  384  IFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLG  443

Query  420  AQIVGPeaseliaeiaamieMGAKLQDIGSTVHTHPTLSEAVMEAAQNARGKAIH  474
             Q+VGPE S LIAE    IE GA+ +D++ T+H+HPTL+E++MEAA+   G A H
Sbjct  444  VQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

331) lpdA3 in NC_006397


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  299 bits (1119),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 196/475 (42%), Positives = 331/475 (70%), Gaps = 10/475 (2%)

Query  2    VVGDVTTSTDVLVIGAGPGGYVAAIRAAQLALDVTLVEKGEYGGACLNRGCIPSKALIHG  61
            + G+V    D+LVIGAG+GGYVAAIRAAQL+  V LV+K+E GG CLNRGCIPSKALI +
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SKLASEAGQAEELG--IYADPTVALDEMINWKDGVVDQLTSGIEQLCTAAGVNLLKGTAE  119
            S    +  +A+ +G  + ++  V + E+++WKDG+V++LT GI  L  + GV+++ G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FADENKVRIIHQGEGQGSESLKFENCIIATGSRPIEIPGFGFEDERIVSSDGALNFDTVP  179
            +++ +  +I  ++E Q    + + + I+A GS P+E+ +  F++ RI+SS  AL+++ VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  DELVIVGAGYIGMELATVYSRLGSDVSVIEMLEQALPSYEEDIASIVRKRAERLGVDFHF  239
            ++LV+VG+GYIG+EL+T Y+++G+ V+++E  +  L++ +  ++  V+++   +G+    
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV--  266

Query  240  GYTADSWAASDGKAVLTAVPADEAAHDSDIELTADRILVAVGRRPVTDTLSIDDAGVETN  299
               +D+   ++ ++    V  +   ++ +  +  D  LV++GR+P T+ +++++ GV  +
Sbjct  267  --ITDALVQGGENTG-DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD  323

Query  300  AQGFIPTDSTCRTNKEHIFAVGDVAGEPMLAHKGSKegevaaeviagepaavDYQALPAA  359
             QGFI  ++ C+TN EH++A+GD AG  +LAHK+S E+ +AAEVI+G+ + +D+QA+P  
Sbjct  324  DQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFV  383

Query  360  VFTDPEIGTVGLTENEAANKGMTPVTGEFQFQASGRALTANRAEGFVRIIATKETERVIG  419
            +F+DPE++  GLTE+EA +KG   V++ F FQA++RAL+ + A+GFV+++A K+T RV+G
Sbjct  384  IFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLG  443

Query  420  AQIVGPeaseliaeiaamieMGAKLEDIGSTVHTHPTLSEAIMEAAQNAREKAIH  474
             Q+VGPE S LIAE    IE GA+ ED++ T+H+HPTL+E++MEAA+     A H
Sbjct  444  VQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

332) lpdA4 in NC_014640


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  298 bits (1118),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 185/448 (42%), Positives = 308/448 (69%), Gaps = 10/448 (2%)

Query  18   ELLVLGGGPGGYTAAFRAADLGLAVTLVEERPALGGVCLNVGCIPSKALLHAARALEETR  77
            +LLV+G+G+GGY AA+RAA+LG  V LV+ ++ LGGVCLN GCIPSKAL+ A+  + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  78   GLHELGIEF-GEPRIRLDKLRRWKEALVAKLNGGLAGLAKRRKVRVVHGLGQFTGSNTLE  136
              + +G+   GE ++ +  + +WK+++V KL +G+  L K   V V+ G + +T ++   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  137  V---AGGQTVRFKQAIIAVGSHPVRLAGLP-DDPRIMDSSDALALESVPQRLLVVGGGII  192
            +      Q   +K+ I+A+GS PV L ++P D+ RI+ S++AL L+ VP++L+VVGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  193  GMELATVYAALGTRVTVVELTDGLLPGCDRDLVKPLEQRVASRYEAILTGTRVVSASARE  252
            G+EL+T YA +G++VT++E +D +L+G D  L K + +++     +++T++ V ++    
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  253  D--GVHVVFSGPHGVGPQVYDAVLVAAGRRPNGARIGADRAGVLVDERGFIAVDERQRTN  310
            D   VHV   G + +    Y   LV+ GR+PN ++IG +  GV++D++GFI ++++ +TN
Sbjct  280  DEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  311  VPHILAIGDVVGEPMLAHKAAYEGKVAAEIAAGKKAGNDAKVIPAVAYTDPEVAWVGLTE  370
            + H+ AIGD  G  +LAHKA+YE+K+AAE+ +G+++  D + +P V ++DPEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  371  TAARRDGVAFESASFPWAASGRALSLGRGEGLTKILVEPRTRALLGVGMVGPQAGDLISE  430
              A+  G    S+ FP  A++RALS++ ++G+ +++ E  T+ +LGV MVGP+ + LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  431  AALAIEMGAEPGDIALTIHPHPTLSETL  458
            A +AIE GA++ D++LTIH+HPTL+E L
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPL  485

333) pdhD1 in NC_015948


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  298 bits (1118),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 189/456 (42%), Positives = 313/456 (69%), Gaps = 8/456 (1%)

Query  2    VVGDVTTGTELLVIGGGPGGYVAAIRGAQLGLDTTLVERDAYGGTCLNHGCIPSKALISA  61
            + G+V    +LLVIG+G+GGYVAAIR+AQLG    LV++   GG CLN+GCIPSKALISA
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SDVAHDARQAESMG--VFADPAVDMAGMTEWKDGVVTRLTRGVESLCESAGVNLVEGTAE  119
            S+   + ++A++MG  V ++  VDM+ +  WKDG+V +LT G+ +L  + GV+++ G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FIDDGTVRVAHGGDGQGSESLSFEHAIVATGSRPMAVPGFEFDGGHILSSKDALALESVP  179
            + +    ++   ++ Q    +S+ + I+A GS P+ + +  FD  +I+SS +AL L+ VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  EKLLVVGAGYIGMELSTVFAKLGAEVTVVEMLGDVLPGYEDDVAAVVRDRAEDLGIDFNF  239
            + L+VVG+GYIG+EL+T +AK+GA VT++E  + +L+G +  ++  V+ +  ++GI    
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  240  GEAADDWDETEEGIRVQT-VDEDDAVTEYNAEKCLVAVGREPVTDTLALENIDLQTDENG  298
            +   ++ ++T + + V+  VD  + + + +   CLV++GR P T+ ++LENI++  D++G
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  299  VIPTDDQCRTAYESVFAVGDVAGEPMLAHKamaegevaaraaagepaaFDHQAIPAAVFT  358
             I  +++C+T  E V+A+GD AG  +LAHKA  E+ +AA   +G+ + +D QA+P  +F+
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  359  DPEIATVGMTESEAEAAGFDPVTGQMPVRANGRALTVNEKEGFVRVVADADEEFLLGAQI  418
            DPE+A  G+TE EA   G++ V+++ P +AN+RAL+V++ +GFV+VVA+ +   +LG Q+
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  419  VGPEASELIAELGLGIEMGARLEDIAGTIHTHPTLS  454
            VGPE S LIAE  ++IE GA  ED++ TIH+HPTL+
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

334) lpdA2 in NC_006396


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  298 bits (1116),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 192/455 (43%), Positives = 311/455 (69%), Gaps = 6/455 (1%)

Query  2    VVGDVTTGTELLVIGGGPGGYVAAIRGAQLGLDTTLVERDAYGGTCLNHGCIPSKALISA  61
            + G+V    +LLVIG+G+GGYVAAIR+AQLG    LV++   GG CLN+GCIPSKALISA
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SDVAHDARQAESMG--VFADPAVDMAGMTEWKDGVVTRLTRGVESLCKNAGVNLVEGTAE  119
            S+   + ++A++MG  V ++  VDM+ +  WKDG+V +LT G+ +L K  GV+++ G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FVDDGTVRVAHGGEGQGSESLSFEHAIVATGSRPMAVPGFEFDGEHILSSKDALALESVP  179
            + +    ++   +E Q    +S+ + I+A GS P+ + +  FD  +I+SS +AL L+ VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  EKLLVVGAGYIGMELSTVFAKLGAEVTVVEMLDDVLPGYEDDIATVVRDRAEELGIDFNF  239
            + L+VVG+GYIG+EL+T +AK+GA VT++E  D +L+G +  ++  V+ +  E+GI    
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  240  GEAADNWEETDEGIRVQtvdedevvteYNAEKCLVAVGREPVTDTLALDNIDLQTDENGV  299
            +   +  E+T++ + V+   ++      + + CLV++GR P T+ ++L+NI++  D++G 
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEII-QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  300  IPTDDQCRTAFESVFAVGDVAGEPMLAHKamaegevaaraaagepaaFDHQAIPAAVFTD  359
            I  +++C+T +E V+A+GD AG  +LAHKA  E+ +AA   +G+ + +D QA+P  +F+D
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  360  PEIATVGMTESEAEAAGFEPVIGQMPVRANGRALTVNEKEGFVRVVADADEEFLLGAQIV  419
            PE+A  G+TE EA   G+E V ++ P +AN+RAL+V++ +GFV+VVA+ +   +LG Q+V
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  420  GPEASELIAELGLGIEMGARLEDIAGTIHTHPTLS  454
            GPE S LIAE  ++IE GA  ED++ TIH+HPTL+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

335) Mmar10_0709 in NC_008347


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  298 bits (1115),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 200/471 (43%), Positives = 322/471 (69%), Gaps = 8/471 (1%)

Query  7    QVLIVGGGPGGYPAAIRAGQLGLDTIIVDKHGLGGTCLNRGCIPSKAMIHAATKFEEMGK  66
            ++L++G+G+GGY AAIRA+QLG   ++VDK  LGG CLNRGCIPSKA+I A+ +  ++ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHI-K  99

Query  67   HADSDVLGISLAEAPKLDMGKLVGWKDGIVSKLTGGVGQLIKAAGAEHLAGWAEFSNAKT  126
            HA++  +G+ ++   ++DM  +V WKDGIV+KLT+G+  L+K+ G E ++G A +++A  
Sbjct  100  HANT--MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  CVVTQDNGEKVEITAENVILATGSVEVELPFLPFGDT-VIGSTEALNLTELPEKLVVVGA  185
              +  ++ E++ ++  ++ILA GS+ VEL  +PF++  +I+STEAL+L E+P+ LVVVG+
Sbjct  158  AKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGIAYRKLGSDVTFIEASDGILPLYDKEITRPITMWLKKHKVAVNLSCKAKGVT  245
            GYIGLELG AY K+G+ VT++E+SD IL+  D  +T+ +   LK   ++V      +G  
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG-G  275

Query  246  EKGGKAVLAYEDAKGAAQTIEADKILVAVGRKACLDGWGLENMGLDLEGGKFIKVDSQCR  305
            E+ G  V    +  G  + I+ D  LV++GRK+  +  GLEN+G+ L++  FIK++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  306  TGMRGVYAIGDVVGEPLLAHKATAQGEMVAEIIAGHRREHDPVSIAAVCFTEPEIVGVGL  365
            T +  VYAIGD  G  LLAHKA+ ++ + AE+I+G+    D  +++ V F++PE+   GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  366  TPDEAKAKGEEIITGKFPLAASGRYLSMEAGLDGGFVRVTARKEDHVILGIHAVGTHVSE  425
            T  EAK KG E ++++FP+ A++R LS+  +  +GFV+V A K+   +LG++ VG +VS 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDA--DGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  426  LSGEFALAVEMGARLDDIAGTIHVHPTLTEGFAEAALTALGHPIHISAPKK  476
            L +E  +A+E GA  +D++ TIH HPTL E + EAA   +GH+ H+   K+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

336) GEM_2214 in NC_018513


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  298 bits (1116),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 194/467 (42%), Positives = 315/467 (68%), Gaps = 10/467 (2%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVEREQLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++ +LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QARGQAGEGMLGIRVRAP-EIDIAKSVAWKDGIVERLTRGVGALLKKHGVRVLNGDARVV  121
            + +       +G++V +  ++D++  V WKDGIV++LT G+ +LLK +GV V++G+A + 
Sbjct  97   HIKHANT---MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVDVVAGDHTTRIACEHLLLATGSEPVALPSMPFGG-HVVSSTEALSPTSLPKRLVV  180
            ++    +   D+   ++  +L+LA GS PV L SMPF+  +++SSTEAL    +P++LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGLVYRKLGVDVSIVEAAQRVLPAYDAELAKPVADSLARLGVGLWLGHQVL  240
            VG+GYIGLELG  Y K+G  V+I+E+++ +L++ D+ L+K V   L  +G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  G---LANDGAVRVQAPDGAEKTLPADRVLVAVGRRPRVDGFGLESLSLDRNGRAL-RIDD  296
            G    +++  V+VQ  DG E  +  D  LV++GR+P  + +GLE++++  +++++ +I++
Sbjct  274  GGENTGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  297  ECRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGRRRKFVPASIPAVCFTDPEIVT  356
             C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   ++P V F+DPE+  
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  357  SGWSPDEAKAAGVDCISASFPFAANGRAMTLQATDGFVRVVARRDTHLIVGWQAVGRGVS  416
            +G +  EAK  G + +S+ FPF AN+RA+++  +DGFV+VVA ++T  ++G Q VG  VS
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  417  ELAAAFSQSLEMGARLEDIGGTIHAHPTLGEAMQEAALRALGHALHV  463
             L A    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

337) DGo_CA0210 in NC_017790


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  298 bits (1115),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 199/467 (43%), Positives = 330/467 (71%), Gaps = 12/467 (2%)

Query  8    DVLVIGAGPGGYHAAIRAAQLGLKVACAEREAVGGVCLNVGCIPTKALLHAGETVAGARH  67
            D+LVIGAG+GGY AAIRAAQLG KV   ++  +GGVCLN GCIP+KAL+ A+E V   +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  68   AAEFGLTF-GEQKLDIAKLNGWKDGIVKKLTGGVGSLFKANKVTHLQGQASFVDDHTVKV  126
            A   GL   GE ++D++ +  WKDGIV+KLT+G+ +L+K+N V  + G+A + + H  K+
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  127  ----GDKTYTAANFIIATGSDPARLPGLDVDQDRIVDSTGALVLPSPVPERMLCVGGGVI  182
                 ++ ++  ++I+A GS P  L ++  DQ RI+ ST AL L   VP++++ VGGG I
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGYI  219

Query  183  GFEFANIYTNLGSKVKVIEFLPNIIPGADADAVKAFQKAMEKQGVVVEVQTKANKAEKKE  242
            G+E++  Y+++G+KV ++E    I++G+D+   K+ ++ +   G+ V  ++  + +E+  
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  DGVHVELENVKTGEKRTEVF--DRVLVAVGRRPRTDGLNAQAAGVNVTDRGFIPADKQQR  300
            D V+V+++     + + E++  D  LV++GR+P T+ +  +  GV + D+GFI  +++ +
Sbjct  280  DEVNVHVQ----VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TNVAHIYSIGDVASNPMLAHKAMKEGLVAAEVIAGKPAAQDAVAIPGVVYTSPELAWVGL  360
            TN+ H+Y+IGD A+  +LAHKA  E+ +AAEVI+G+ +  D  A+P V+++ PE+A  GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  TEQEAKDKGYEVKTGNFPFSASGRAMTLQQTDGFVKMVVEKDTDLLLGVHIVGPHASDml  420
            TE+EAK+KGYE  ++ FPF A++RA+++ ++DGFV++V EK+T  +LGV++VGP+ S ++
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  geaglalemaaTASDIALTIHAHPTLGESVLEAAEAVHKQAIHIMNR  467
            +EA +A+E +A A D++LTIHAHPTL E+++EAAE+V  +A H++N+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

338) PSJM300_13480 in NC_018177


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  297 bits (1112),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 194/476 (41%), Positives = 332/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYQGKEGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFNVHGISTGDVKMDVPTMVARKDQIVKNLTGGVAALLKANGVTVFEGH  121
             +S +  +  ++  +    +G+V++D+P +V +KD IV++LT+G+ +LLK+NGV V+ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKQVEVTKLDGSTETLAAENVILASGSKPVDIPPAPVDQKIIVDSTGALDFQSVP  181
            +  L+  ++   K+++  + ++  ++ILA GS PV++ + P DQK I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  ARLGVIGAGVIGLELGSVWARLGAEVTVIEAMDKFLPAADEQISKEAFKVLSKQGLKILL  241
             +L V+G+G IGLELG+  A++GA VT++E+ D +L+++D  ++K   + L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARLTGSEVKGEEVTVSFTSAEGEQQQTFDKLIVAVGRRPVTTDLLAADTGVDMDERGFI  301
            +A + G+E  G+EV V       E+    D  +V++GR+P T  +   + GV +D++GFI
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDQCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKSQMNYDLIPSVIYTHP  361
             ++++C T++  VYAIGD   G +LAHKAS E+ + AE I+G++S ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKSEGVEVNVGVFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVMG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PAAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKK  477
            P  + L+ ++ +++E G++AEDL++ + +HPT++E+L EAA +V GHA H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

339) lpdA in NC_021174


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  297 bits (1114),  Expect = 8e-82, Method: Compositional matrix adjust.
 Identities = 207/469 (45%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TRTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             +   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTEAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARVV  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  DGKNVDVDTGDGARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTEALSPGRLPKRLV  181
            ++    +   D  ++ +   +L+LA GS PVEL +MPF+ + +ISSTEAL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLDVDVTVVEARERILPIYDAELTKPVAASLKRLGVRVHLGHEV  241
            VVG+GYIGLELG AY K++  VT++E+ + IL+  D+ LTK V   LK +G+ V  +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVRVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAELVAGKRRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G+   +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERAFGACLSASFPFAANGRALTLEGADGFVRVVARRDDHVIVGWQAVGVG  417
             +GL+  EA E+++ + +S+ FPF AN+RAL++ +ADGFV+VVA ++   ++G Q VG  
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVSGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED+S TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

340) Pden_4760 in NC_008688


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  297 bits (1114),  Expect = 8e-82, Method: Compositional matrix adjust.
 Identities = 202/461 (44%), Positives = 312/461 (68%), Gaps = 9/461 (1%)

Query  8    LLVIGAGPGGYVCAIRAGQLGVDTVVVDAAPPGGTCLNVGCIPSKALIHAADEFHRLAQL  67
            LLVIGAG+GGYV AIRA+QLG   V+VD A  GG CLN GCIPSKALI A++   R+ ++
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   SSTPSMGIS-AGPARLDLGATMAWKDGIVERLTGGVATLLRKAKVRLVTGRASIRDGKTV  126
              + +MG+  +G  ++D+   + WKDGIV++LT+G+ TLL+   V +++G A + ++   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  127  LVETPEGPVQIRTEVLVLATGSEPIELPALPFGGK-VISSTDALALTEVPGRLAVVGGGY  185
             +   +    +    L+LA GS P+EL ++PF+ K +ISST+AL L EVP +L VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  186  IGLELGIAYAKLGAEVTVVEAAPRILPQYDAELTRPVAQRLTQLGIRVLTGA-RAGGLSD  244
            IGLELG AYAK+GA VT++E++  IL+  D+ LT+ V ++L ++GI V+T+A   GG + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  SGALRV-AGVDGAEDI-QADKVLVTVGRRPRATAAGVDGLRLDMAGP-FIRIDERCRTSM  301
            ++ + V   VDG E+I Q D  LV++GR+P +   G++ + + + +  FI+I+++C+T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  302  TGVLAIGDVTGEPMLAHRAMVQGEMVAELVAGQPRAWDKRAIPAVCFTDPEIVSVGISPE  361
              V AIGD +G  +LAH+A  ++ + AE+++GQ    D +A+P V F+DPE+   G++  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  362  EAAAAGREVVTGLFPFAANGRAMTAGDEAGFIRVTARPDTHEVLGIQavgagvaemaggf  421
            EA   G E V++ FPF AN+RA++ +D  GF++V A  +T  VLG+Q VG+ V+ + +  
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  422  aLALEMGARLEDIAGTIHAHPTRGEALHEACLRALGHALHI  462
             +A+E GA  ED++ TIHAHPT  E+L EA    +GHA H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

341) NH44784_041831 in NC_021285


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  297 bits (1113),  Expect = 9e-82, Method: Compositional matrix adjust.
 Identities = 205/471 (44%), Positives = 310/471 (66%), Gaps = 10/471 (2%)

Query  2    SQTTKTTTLLVIGGGPGGYVAAIRAGQLGVPTILVEGDRLGGTCLNIGCIPSKALIHAAE  61
            ++  K   LLVIG+G+GGYVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI A+E
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE  93

Query  62   EFDKARHYAGQSALGISVSAPA-IDIGRTVAWKDGIVGKLTGGVGALLKKNGVQVVQGWA  120
               + +H    +++G+ VS+   +D+   V WKDGIV KLT+G+ +LLK NGV+V+ G A
Sbjct  94   ---RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  SLLDGKTVEVESADGSRQRIQCEHLLLAAGSEPTPLPSVPFGGM-VVSSTEALSPADIPK  179
             L ++    +   D   Q +   +L+LA GS P  L S+PF+   ++SSTEAL   ++P+
Sbjct  151  YLTEAHIAKIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  180  KLVVVGGGYIGLELGTVYRKLGAEVAVVEAQDRILPTYDAELTKPVAAALARLGVELHLG  239
             LVVVGGGYIGLELGT Y K+GA V+++E+ D IL+  D+ LTK V   L  +G+ +  +
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  240  RKVLGLNGAGTAVRIQ-DASGAETALPADRVLIAVGRRPRTQGWGLENLQ--LDRKGNAL  296
              V G + +G  V ++ +  G E  +  D  L+++GR+P T   GLEN+   LD +G  +
Sbjct  270  ALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FI  328

Query  297  RIDDQCRTSMRDVWAIGDIAGEPMLAHRAMAQGEMVAELVAGKRRHFQPAAIPAVCFTDP  356
            +I+++C+T++ +V AIGD AG  +LAH+A  ++ + AE+++G+   ++  A+P V F+DP
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  357  EVVVAGLSPAEAEAAGLDCLAASFPFAANGRAMTLESTDGFVRVVARRDNHLIVGWQAVG  416
            EV  +GL+  EA   G + +++ FPF AN+RA+++  +DGFV+VVA ++   ++G Q VG
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  417  RGVSELSTAFGQSLEMGATLEDVAGTIHAHPTLGEAVQEAALKALGHALHI  467
              VS L +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

342) Gura_1264 in NC_009483


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1109),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 198/466 (43%), Positives = 326/466 (70%), Gaps = 9/466 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGMRVAVVERSERLGGVCLNEGCIPSKALLDSSELFVLAR  66
            DL+VIGAG+GGYVAAIRAAQLG +V +V+++E LGGVCLN GCIPSKAL+ +SE     +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   DRFSLHGIDIDPP-KLNLARMMARKDDVVKKLTDGVAFLFKKNKITRFQGTARLAGKSGD  125
            +  ++ G+ +    +++++ ++ +KD++V+KLTDG+  L+K N +  + G A L+     
Sbjct  100  HANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  126  DHRIEVRGTGNKENQILTSKRMLLATGSQAMEVPAFPFDGETVVSARDALSFSSVPEHLL  185
              +IE       E+QI++ K ++LA GS ++E+ + PFD   ++S+ +AL +  VP+HL+
Sbjct  159  KIKIE------DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  186  VVGGGYIGLELGSVWLRLGSKVTVVEMLPKILPNTDRQVADALMRSLKKQGMTFLLETKV  245
            VVGGGYIGLELG+   ++G+KVT++E    IL+ TD  ++ ++ R LK  G+T + ++ V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  246  SSLEKRDGKAHVQINSGDKAEEIVCDRVLVAVGRRPLSADLGLEETGIVVDGEGRITVNE  305
             + E+ ++  +V+++ ++K E I CD  LV++GR+P ++ +GLE+ G+V+D++G I +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  306  DYATSVAGVYAIGDLVHGPMLAHKAMTEGEVFAERLLGQASVVDYEFIPGIIYTWPEAAS  365
               T++  VYAIGD   G +LAHKA  E+ + AE + GQ SV+D++ +P +I++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  366  VGKTEEQLQAENIPYAAGRFNFMANGRARCMDETDGFVKVLAHKETGRVLGVHIIGPRAS  425
             G TE + +       ++RF F AN+RA  + ++DGFV+V+A+K+T RVLGV+++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  426  DMIAEAVTVMTYGGSAQDIAMTFHAHPTLSEAMKEAALDVEKRAIH  471
             +IAEAV  +  G++A+D+++T+HAHPTL+E++ EAA +V  +A H
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

343) Bcep18194_A4363 in NC_007510


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1108),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 195/467 (42%), Positives = 313/467 (68%), Gaps = 10/467 (2%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVERDRLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++  LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QARGHAGEGALGIRVRTP-EIDIGKSVAWKDGIVDRLTRGVGALLKKNGVRVLHGDAQVV  121
            + + HA   ++G++V    ++D+   V WKDGIV++LT G+ +LLK NGV V+ G+A + 
Sbjct  97   HIK-HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVDVVAGGHTTRISCEHLLLATGSEPVALPSMPFGG-HVVSSTEALSPETLPKRLVV  180
            ++    +   ++   +S  +L+LA GS PV L SMPF+  +++SSTEAL  + +P++LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGIVYRKLGVDVSVVEAAERVLPAYDAELVRPVADSLARLGVRLLLGHKVL  240
            VG+GYIGLELG  Y K+G  V+++E+++ +L++ D+ L + V   L  +G+ ++ +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  GPAEHG---AVRVQAADGAEQTLQADRVLVAVGRRPRVDGFGLESLPLDRNGRAL-WIDD  296
            G  + G    V+VQ  DG E+ +Q D  LV++GR+P  + +GLE++ +  +++++  I++
Sbjct  274  GGENTGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  297  ECRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGKRRKFMPASIPAVCFTDPEIVT  356
             C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   ++P V F+DPE+  
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  357  AGWSPDDARAADVDCVSASFPFAANGRAMTLQATDGFVRVVARRDNHLIVGWQAVGRGVS  416
            +G +  +A+  + + VS+ FPF AN+RA+++  +DGFV+VVA ++   ++G Q VG  VS
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  417  ELAAAFSQSLEMGARLEDIGGTIHAHPTLGEALQEAALRALGHALHV  463
             L A    ++E GA  ED++ TIHAHPTL E+L EAA   +GHA H+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

344) Bamb_1126 in NC_008390


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1108),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 194/466 (42%), Positives = 309/466 (67%), Gaps = 8/466 (1%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVERERLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++  LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QACAQAGEGMLGIRVRAP-EIDIAKSVAWKDGIVERLTRGVGALLKKHGVRVLQGDARVV  121
            +         +G++V +  ++D++  V WKDGIV++LT G+ +LLK +GV V+ G+A + 
Sbjct  97   HI---KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVDIVAGDHTTRIACEHLLLATGSEPVALPSMPFGG-HVVSSTDALSPTSLPTRLVV  180
            ++    I   D+   ++  +L+LA GS PV L SMPF+  +++SST+AL    +P +LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGTVYRKLGVDVSIVEAAERVLPAYDAELAKPVADSLAQLGVGLWLGHTVL  240
            VG+GYIGLELGT Y K+G  V+I+E+++ +L++ D+ L+K V   L ++G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  GLASDG-AVRVQAP-DGAQKTLPADRVLVAVGRRPRVDGFGLEALPLDRNGRAL-RIDDA  297
            G  + G  V V+   DG +  +  D  LV++GR+P  + +GLE + +  +++++ +I++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  298  CRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGRRRKFTPASIPAVCFTDPEVVTS  357
            C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   ++P V F+DPEV  +
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  358  GWSPDDAKAAGVDCISASFPFAANGRAMTLHATDGFVRVVARRDTHLIVGWQAVGRGVSE  417
            G +  +AK  G + +S+ FPF AN+RA+++  +DGFV+VVA ++T  ++G Q VG  VS 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  418  LAAAFSQSLEMGARLEDIGGTIHAHPTLGEAVQEAALRALGHALHV  463
            L A    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

345) Nmag_1665 in NC_013922


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1108),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 202/481 (42%), Positives = 336/481 (70%), Gaps = 23/481 (4%)

Query  13   LVIGAGPAGYVAAIRAGQLDLDVTLVEKDAYGGTCLNHGCIPSKALITATDVAHDARNAE  72
            LVIGAG++GYVAAIRA+QL+  V LV+K   GG CLN+GCIPSKALI+A++   + ++A+
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN  102

Query  73   AMG--IHADPAIDLAGMVSWKDDVVDQLTGGVEKLCKANGVNLMEGMATFADENTVRISH  130
            +MG  + ++  +D++ +V WKD++V++LT+G+  L K+NGV+++ G A +++ +  +I  
Sbjct  103  TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI  162

Query  131  DGEGQGSETLEFEHAIVATGSRPIEIPNFSYGDEPILNSRQAlsldsvpdslvvvGAGYI  190
            ++E Q    + + + I+A GS P+E+ + ++++  I++S +AL L+ VP+ LVVVG+GYI
Sbjct  163  EDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  191  GMELASVFAKLGTDVTVVEMLDEILPGYDDDLKRPVKQHAKGLGIEFEFGYTAAEWHERE  250
            G+EL++ +AK+G+ VT++E  D IL+G D  L + VK                  +H +E
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVK------------------RHLKE  261

Query  251  DGDGVRVvaepapevaadggaaaeeaeeadtldldaeKVLVAVGRQPVSDTLDLGEAGVE  310
             G  V   A       +++    +   ++    ++ +  LV++GR+P ++ ++L + GV 
Sbjct  262  IGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVV  321

Query  311  TNDKGFIETDSRARTNVEHIFAVGDVAGEPMLAHKGSMegevaaeviagePSAIDYQAMP  370
             +D+GFI  +++ +TN+EH++A+GD AG  +LAHK+S E+ +AAEVI+G+ S ID+QAMP
Sbjct  322  LDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMP  381

Query  371  AVVFTDPEIATVGMSETDAEDAGFDTVVGKFPFRASGRALTTGESDGFVKIVAEEEEGYV  430
             V+F+DPE+A  G++E +A + G++TV ++FPF+A++RAL+ +++DGFV++VAE +   V
Sbjct  382  FVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRV  441

Query  431  LGASIVGPEASELVGELGLAIELGATLEDVASTVHAHPTLSESVMEAAENALGHAIHTLN  490
            LG  +VGPE S L++E  +AIE GA  ED++ T+HAHPTL+E++MEAAE  +GHA H LN
Sbjct  442  LGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

Query  491  R  491
            +
Sbjct  502  K  502

346) Trad_2118 in NC_014221


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1109),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 193/464 (42%), Positives = 321/464 (70%), Gaps = 7/464 (1%)

Query  4    EVLVIGSGPGGYHAAIRAAQLGKKTACVEQEYVGGVCLNVGCIPTKALLHVAEDLREAKH  63
            ++LVIG+G+GGY AAIRAAQLGKK   V++  +GGVCLN GCIP+KAL+  +E +++ KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  64   AKSYGIDF-GEPKVDLKKLEAWKSGVVQKLTGGVRSLLKGNKVDLIEGRATLKDPHTVQV  122
            A++ G+   GE +VD+  +  WK G+V+KLT+G+R+LLKGN V++I G A L ++H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  123  ----GDRSVTAEKIIVATGSEPIEIPGFETDGERIVNSTGALLVSEVPKRFLAIGGSAIG  178
                 ++  +   +I+A GS P+E+ +   D  RI++ST AL + EVP++++ +GG+ IG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  179  LEFSDIYHALGSDVTVVELMDEIVPTADRDAAKELRKSFEKRGIKILTSTKALNQKKTAD  238
            LE++  Y  +G+ VT++E  D I++ +D   +K +++ +   GI ++T +      +T+D
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  239  GIEVTLERGGERETLVVDKILVAVGRKPRGTGLGLEEVGVTVE-RGFVPTNAHMQTNVPH  297
             ++V ++ +G  E +  D  LV++GRKP    +GLE++GV ++ +GF+  N   QTN+ H
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  298  IYAIGDVTKPPLLAHKAMKEGIVAAEHAAGKPAAYD-TIVPAVVYTSPELASVGMTEQEA  356
            +YAIGD +   LLAHKA  E+ +AAE  +G+ +  D   +P V+++ PE+A  G+TE+EA
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  357  KDAGHKVRVGVFPLAASGRAMTLGVSEGLVKVIGDEETDLLLGFHMVGPAAGDMVAEAAL  416
            K+ G     + FP+ A++RA++++ ++G+V+V+++ +T  +LG +MVGP  + ++AEA +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  417  AIEMGATLEDISLTQHAHPTIAESFMEAAEAAHGMAIHVANKRR  460
            AIE GA  ED+SLT HAHPT++E++MEAAE+  G A H+ NK++
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

347) Pfl01_1616 in NC_007492


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1110),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 326/476 (69%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDAEGKQALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG     ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKPDGSVEVIEAENVILAPGSRPIDIPPAPVDQKVIVDSTGALEFQSVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQK I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWSRLGAEVTVLEALDTFLMAADTAVSKEALKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  +++GA VT+LE+ DT+L ++D  ++K   + L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGDEVVVNYTDANGEQTITFDKLIVAVGRRPVTTDLLAADSGVTLDERGFV  301
            +A V G+   GDEV V+      E+ I  D  +V++GR+P T  +   + GV LD++GF+
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  HVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T +  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKK  477
            P  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

348) MI1_03390 in NC_016805


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1107),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 200/462 (44%), Positives = 332/462 (72%), Gaps = 4/462 (0%)

Query  10   IDTVVIGSGPGGYVAAIRAAELGQKVVIIERDNIGGVCLNIGCIPSKALINVGHRYREAT  69
            +D +VIG+G+GGYVAAIRAA+LG+KVV++++ ++GGVCLN GCIPSKALI+ ++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EETPFGLLTSGAT-LDWQKTQDWKQNKVVHTLTSGVEMLLKKHHVEIVKGEAVFNDNETL  128
            +    GL  SG   +D      WK+  +V+ LT G+  LLK + VE++ GEA + + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  NVLQEDGHELLQFNNAIIATGSRPIEIPTIPFGE-RIVDSTGALGFTEIPKRLiivgggv  187
            ++  ED ++++ +++ I+A GS P+E+ ++PF++ RI+ ST AL + E+P++L++VGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igseiggAYANLGAQVTIIEGLDHTLNGFDAEMTKPVLDDFKAHGGTVVTSAMAKEATQT  247
            IG E+G AYA++GA+VTI+EG D  L+G D+ +TK V  ++K  G TV+T A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  AKEVTLTYEADGKEQSITGDYLLVAVGRRANTDGLGLNNTDIKVDSKGLITTSDTMKTSV  307
            + EV +  + DGKE+ I  DY LV++GR++NT+ +GL+N ++ +D +G+I  ++  +T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIYAIGDVVAGPQLAHKASFEGKIaaaaiaedaqaRDLHYSLPSVAYTQYELATTGETP  367
             H+YAIGD  +G  LAHKAS+E+KIAA  I+ +    D++ ++P V +++ E+A TG T 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYTGLTE  397

Query  368  KSVKVNHLDAKISKFPFAGNGRAISMDQAVGFVRLISDKSSNALIGAQIVGPSASDLISE  427
            K  K +  ++  S+FPF +N+RA+S+ +A GFV+++++K+++ ++G Q+VGP  S LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  428  LSLAIENGLTTKDISLTIHPHPTLGEAIMDAAELADGLPIHI  469
              +AIE G  + D+SLTIH+HPTL E++M+AAE   G + H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

349) Deima_0504 in NC_014958


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  296 bits (1107),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 196/464 (43%), Positives = 325/464 (71%), Gaps = 7/464 (1%)

Query  4    DVLVIGAGPGGYHAAIRAAQLGLKVACAEMDKVGGVCLNVGCIPTKALLHAGEQLAASRH  63
            D+LVIGAG+GGY AAIRAAQLG KV   +   +GGVCLN GCIP+KAL+ A+E++   +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  64   AADFGLTF-GETRMDISKLMGWKDGIVKKLTGGVSSLFKANKVTHLIGQASFVDANTVRV  122
            A   GL   GE ++D++ ++ WKDGIV+KLT+G+ +L+K+N V  + G+A + +A+  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  123  ----GDKTYTASSIIIATGSEPARLPGFDVDQDRVVDSTGALTITEVPERMLAIGGGVIG  178
                 ++ ++   +I+A GS P  L +   DQ R++ ST AL + EVP++++ +GGG IG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  179  FEFAHVYTNLGSKVKVIEFLPNVIPGADADAVREFTKSMKKQGIEIATSTKANKLERKGN  238
            +E++  Y+++G+KV ++E    +++G+D+   +   + +K  GI + T +  +  E  G+
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  239  ELHVEIENVQTGEKTTEVYDRVLVAVGRRPRTAGLNPEAAGVQVTDRGFITVDRQQRTNV  298
            E++V+++ V+  E   +  D  LV++GR+P T+ +  E  GV + D+GFI ++ + +TN+
Sbjct  281  EVNVHVQ-VDGKEEIIQ-CDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  299  PHIYAIGDVAGNPMLAHKAMKEGLVAAEVIAGKPAEQDAVAIPGVVYTSPELAWVGLTEA  358
             H+YAIGD AG  +LAHKA  E+ +AAEVI+G+ +  D  A+P V+++ PE+A  GLTE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  359  EAKEKGFQVKTGVFPLSASGRAMTLQSTDGFVKMVVEEGTDLLLGVHIVGPHASDllgea  418
            EAKEKG++  ++ FP+ A++RA+++  +DGFV++V E  T  +LGV++VGP+ S L++EA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  419  glalemaatatDIALTVHAHPTLGESVLEAAEAVHKQAIHIMNR  462
             +A+E +A A D++LT+HAHPTL E+++EAAE+V  +A H++N+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

350) lpdA2 in NC_009656


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  295 bits (1106),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 200/463 (44%), Positives = 315/463 (69%), Gaps = 12/463 (2%)

Query  9    LLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARHY  68
            LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  69   AGQSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVTVVQGWARILDGKSV  127
               +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV V+ G A + ++   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  128  AVELAGGGSQRIDCEHLLLAAGSQSVELPSLPLGGK-VISSTEALAPGSLPGRLVVVGGG  186
             + + +   Q +   +L+LA GS +VEL S+P++ K +ISSTEAL    +P +LVVVGGG
Sbjct  159  KIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  187  YIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPGE  246
            YIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  GE
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGGE  276

Query  247  NG---VRVR-DGAGEEREIAADQVLVAVGRRPRSEGWNLESLGLDMNGRA-VKVDDQCRT  301
            N    V V+ +  G E  I  D  LV++GR+P +    LE++G+ +++++ +K++++C+T
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  302  SMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGRRRQFAPLAIPAVCFTDPEVVVAGLS  361
            ++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  PEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLVVGWQAVGKAVSELST  421
              +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   V+G Q VG  VS L +
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  AFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
                ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

351) Deide_22710 in NC_012526


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  295 bits (1105),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 202/470 (43%), Positives = 332/470 (71%), Gaps = 9/470 (1%)

Query  3    KSYDFDVLVIGAGPGGYHAAIRAAQLGLKVACAERESVGGVCLNVGCIPTKALLHAGEQV  62
            K Y  D+LVIGAG+GGY AAIRAAQLG KV   ++  +GGVCLN GCIP+KAL+ A+E+V
Sbjct  37   KKY-VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  63   AAARHAADFGLTFSGQ-SLDIAKLNGWKDGIVKKLTGGVGALFKANKVTHLQGQASFVDD  121
               +HA   GL  SG+  +D++ +  WKDGIV+KLT+G+ +L+K+N V  + G+A + + 
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  122  HTVQV----GDKTYTAANFIIATGSEPAKLPGLEVDQQVIVDSTGALVVPDPVPARMLCV  177
            H  ++     ++ ++  ++I+A GS P  L ++  DQ+ I+ ST AL + + VP +++ V
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVV  214

Query  178  GGGVIGFEFAHVYTNMGSQVKVIEFLPTIIPGADADAVKAFQKSMEKQGIKVATQTKANR  237
            GGG IG+E++  Y++ G++V ++E   TI++G+D+   K+ ++ +   GI V T++  + 
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  238  AEKKADGVHVELENVKTGEKTTEVFDRVLVAVGRRPRTDGLNAQNAGVTVTDRGFIPATT  297
            +E+ +D V+V+++ V   E   +  D  LV++GR+P T+ +  +N GV + D+GFI    
Sbjct  275  GENTGDEVNVHVQ-VDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  298  QQRTNVSHIYSIGDVASNPMLAHKAMKEGLVAAEVIAGKPAEQDAVAIPGVVYTSPELAW  357
            + +TN+ H+Y+IGD A+  +LAHKA  E+ +AAEVI+G+ +  D  A+P V+++ PE+A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  358  VGLTEQEAKDKGYEVKTGNFPFSASGRAMTLQQTDGFVKMVVEKDTDLLLGVHIVGPHAS  417
             GLTE+EAK+KGYE  ++ FPF A++RA+++ ++DGFV++V EK+T  +LGV++VGP+ S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  418  DmlgeaglalemaatatDIALTIHAHPTLGESVLEAAEAVHKQAIHIMNR  467
             +++EA +A+E +A A D++LTIHAHPTL E+++EAAE+V  +A H++N+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

352) LEUM_0740 in NC_008531


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  295 bits (1104),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 200/462 (44%), Positives = 332/462 (72%), Gaps = 4/462 (0%)

Query  10   IDTVVIGSGPGGYVAAIRAAELGQKVVIIERDNIGGVCLNIGCIPSKALINVGHRYREAT  69
            +D +VIG+G+GGYVAAIRAA+LG+KVV++++ ++GGVCLN GCIPSKALI+ ++R ++  
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EETPFGLLTSGAT-LDWQQTQDWKQNKVVHTLTSGVEMLLKKHHVEIVKGEAVFNDNETL  128
            +    GL  SG   +D  +   WK+  +V+ LT G+  LLK + VE++ GEA + + +  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  129  NVLQEDGHELLQFNNAIIATGSRPIEIPTIPFGE-RIVDSTGALGFTEIPKRLiivgggv  187
            ++  ED ++++ +++ I+A GS P+E+ ++PF++ RI+ ST AL + E+P++L++VGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  188  igseiggAYANLGAQVTIIEGLDHTLNGFDAEMTKPVLDDFKAHGGTVVTSAMAKEATQT  247
            IG E+G AYA++GA+VTI+EG D  L+G D+ +TK V  ++K  G TV+T A+ + + +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  248  AKEVTLTYEADGKEQSITGDYLLVAVGRRANTDGLGLNNTDIKVDSKGLITTSDTMKTSV  307
            + EV +  + DGKE+ I  DY LV++GR++NT+ +GL+N ++ +D +G+I  ++  +T++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  308  PHIYAIGDVVAGPQLAHKASFEGKIaaaaiaedaqaRDLHYSLPSVAYTQYELATTGETP  367
             H+YAIGD  +G  LAHKAS+E+KIAA  I+ +    D++ ++P V +++ E+A TG T 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYTGLTE  397

Query  368  ESVKVNHLEAKISKFPFAGNGRAISMDQAVGFVRLISDKSSNALIGAQIVGPSASDLISE  427
               K +  E+  S+FPF +N+RA+S+ +A GFV+++++K+++ ++G Q+VGP  S LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  428  LSLAIENGLTTKDISLTIHPHPTLGEAIMDAAELADGLPIHI  469
              +AIE G  + D+SLTIH+HPTL E++M+AAE   G + H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

353) pdhD in NC_017941


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  295 bits (1104),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 201/479 (42%), Positives = 329/479 (69%), Gaps = 13/479 (2%)

Query  2    VVGDIATGTEVLVIGAGPGGYVAAIRAAQQGLDTTLVEKDAYGGTCLNYGCIPSKALITS  61
            + G++    ++LVIGAG+GGYVAAIRAAQ G    LV+K   GG CLN GCIPSKALI++
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   ADLAHQAGHAEEMGIH--ADPVVDMSQLRDWKDGIVDQLTGGVEKLCKANGVNLIEGTAR  119
            ++   +  HA+ MG+   ++  VDM+++  WKDGIV++LT+G+  L K+NGV++I G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FKDENAVRIAHGGEGQGSETIEFEHCIIATGSRVIQIPGFDFANEQVWSSRDALAAETVP  179
            + + +  +I   +E Q    + + + I+A GS  +++ +  F + ++ SS +AL  + VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  DDLVVVGGGYIGMELSTTFAKLGANVTVVEMLDDILPTYESDVARVVRKRAEVLGIDMHF  239
            ++LVVVGGGYIG+EL+T++AK+GA+VT++E  D IL+  ++ +++ V+++   +GI +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  240  GEGASGWREEDDGIMVTTETEDGEEN---EYYADKVLVAVGRSPVTDTMEIENAGVEPDE  296
            +    G  + +D + V  + ++ EE    +Y     LV++GR P T+ + +EN GV  D+
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYC----LVSIGRKPNTGKIGLENIGVVLDD  324

Query  297  RGFIEVDDFRRTEVDHIYAIGDIVEDTPMLAHVASQEGIVAAEHIAGEPVAFDSQAVPAA  356
            +GFI +++  +T+++H+YAIGD   +  +LAH AS E+ +AAE I+G+   +D QA+P  
Sbjct  325  QGFIKINNKCQTNIEHVYAIGD-CAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFV  383

Query  357  VFTDPEIGTVGMTEEEAEEAGFTPAVGEMPFQASGRALTTGHTEGFVRIVADEDSGFILG  416
            +F+DPE++  G+TE EA E G+    +  PFQA++RAL+ ++++GFV++VA+ ++  +LG
Sbjct  384  IFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLG  443

Query  417  AQIVGPeaselvaelalaieMGARLEDVAATIHTHPTLAEAVMEAAENALGQAIHTLNR  475
             Q+VGPE S L+AE  +AIE GA  ED++ TIH+HPTL+E++MEAAE  +G+A H LN+
Sbjct  444  VQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

354) pdhD in NC_017464


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  295 bits (1104),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 189/463 (41%), Positives = 318/463 (69%), Gaps = 6/463 (1%)

Query  1    MNLTVIGGGPGGYVAAFYAADLGMNVTLIDLERNPGGVCLYRGCIPSKALLHVAKLIHEA  60
            ++L VIG+G+GGYVAA+ AA+LG +V L+D   + GGVCL RGCIPSKAL+  +  + + 
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHI  98

Query  61   EQAKNWGVEF-GKPKIDLDKLRNFKNNVVSKLTGGLGQIAKQRKVNFIQGRASFINSTKL  119
             +A+  G+   G  ++D+  + + K+ +V+KLT+G+  + K   V+ I G  +++  + +
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  120  KIETIDGKTIEHSFDKAIVATGSVIATIPSLNIQSKRLLNSTSALDLPEIPKSLLVVGGG  179
                I++     S+   I+A GS+   + S+ ++ KR+++ST AL+L E+P+ L+VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  180  YIGLELGSVYQALGTQVSVVEMLPNILPGADRDLVNFLVKRVKETFAELMTSSKVLEMKE  239
            YIGLELG+ Y  +G++V+++E    IL+G+D  L + + +++KE    ++T + V    +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  240  IDNAIKVKIQ-DEKGNVVEKNYDYVLMSIGRKPETRGLGLENTKVTLTERGWIKVNKQMQ  298
             ++ ++V +Q D K ++++   DY L+SIGRKP+T  +GLEN  V L ++G IK+N++ Q
Sbjct  278  TGDEVNVHVQVDGKEEIIQ--CDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  299  TTDPNIYAIGDIAGEPMLAHKASHEGRIAVEAIAGHKVAFEPMAIPAVVFTDPEVAWAGL  358
            T   ++YAIGD AG  +LAHKAS E++IA E I+G++  ++  A+P V+F+DPEVA +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  359  TEEEARKQGIKYEVAKFPWAASGRAITLDRTDGVTKLIIDPDTQRLLGIGICGPNAGELI  418
            TE EA+ +G     ++FP  A++RA+++  +DG  +++ + +T+R+LG+ + GP+ + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  419  SEGVLAIEMGANVTDLKLTIHPHPTLSETIMDAAEVFFGQSAH  461
            +E+V+AIE GAN  DL LTIH+HPTL+E +M+AAE   G+++H
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

355) Mesci_0884 in NC_014923


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  294 bits (1100),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 202/462 (44%), Positives = 307/462 (67%), Gaps = 8/462 (1%)

Query  8    LLVIGAGPGGYVCAIRAGQLGVDTVIVEAGKPGGTCLNVGCIPSKALIHAAEEFEKVSHM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+ +  GG CLN GCIPSKALI A+E   +V H+
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   AGGKSPLGISVTAPT-LDLARTVAWKDGIVSRLNSGVAGLLKKAGVKTVHGWASFRDGKT  126
              +++ +G+ V++   +D++  V WKDGIV++L  G+  LLK  GV  + G A + ++  
Sbjct  99   KHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVETETGVQVIRAETIVIASGSAPVELPFLPFGG-RAISSTEALALSDVPKKLAVVGGG  185
              +  E   Q++    +++A GS PVEL  +PF+  R ISSTEAL L +VP+ L VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGMAFAKMGAEVTVIEALPRVLAQYDAELTRPVVKRLTALGVEVMLGAKAKGLST  245
            YIGLELG A+AK GA VT++E+   +L+  D+ LT+ V ++L  +G+ V+ +A  +G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  KGDALLVETS-DGKSAKVAAEKILVTVGRKPVTEGWGLEQIDLDMAGK-FIRIDDQCRTS  303
             GD + V+   DGK   +  +  LV++GRKP T   GLE+I++ + ++ FI+I+++C+T+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  304  MRGIFAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRSIPAVCFTDPELVTAGLSP  363
            +  ++AIGD +G  +LAH+A  ++ + AE+++G++   D +++P V F+DPE+  +GL+ 
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  364  EEAKALGGEIKIGMFPFAANGRAMTKLGEDGFVRVLARADNHLVLGIQAVGQGVSELAAA  423
             EAK  G E   + FPF AN+RA++  + DGFV+V+A  +   VLG+Q VG  VS L A 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  424  FGLALEMGARLEDIAGTIHAHPTQGEGFQEAALKALGHALHI  465
              +A+E GA  ED++ TIHAHPT  E + EAA   +GHA H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

356) Halru_0171 in NC_019964


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  294 bits (1100),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 187/459 (41%), Positives = 310/459 (68%), Gaps = 18/459 (3%)

Query  30   QLDLDVTLVEKDAYGGTCLNHGCIPSKALITATDVAHEARHAEEMGIH--ADPAVDMAGM  87
            QL+  V LV+K   GG CLN+GCIPSKALI+A++   + +HA+ MG+   ++  VDM+ +
Sbjct  60   QLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVDMPEV  119

Query  88   VDWKDGVVDQLTSGVEKLCKANGVSLMEGTAKFADENSVRVSHGGEGQGSESVDFEHAIV  147
            V WKDG+V++LT G+  L K+NGV ++ G A +++ +  ++   +E Q      + + I+
Sbjct  120  VKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQ---IFSYKDLIL  176

Query  148  ATGSRPIQIPGFDFADEPVLSSKDALSLESVPESLVIVGAGYIGMELAGVYAKLGTDVTI  207
            A GS P+++ +  F +  ++SS +AL L+ VP+ LV+VG+GYIG+EL+  YAK+G+ VTI
Sbjct  177  AIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTI  236

Query  208  VEMLDEMLPAYPDDLTRPVAQRAEELGIDFHFGYSAAEWQDLGDGIRVVAEPADAVASDG  267
            +E  D +L++    LT+ V ++  E+GI       +   + L +G    ++  +     +
Sbjct  237  LEGSDTILSGTDPILTKTVKRHLKEIGI-------TVITDALVQGGENTGDEVNVHVQVD  289

Query  268  GAEAVEADPIELDTEKVLVAVGRQPVSDTLDIEAAGVETDDRGFIPTDDRGRTNVDHIHA  327
            G E +      ++ +  LV++GR+P ++ +++E  GV  DD+GFI  +++ +TN++H+ A
Sbjct  290  GKEEI------IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYA  343

Query  328  VGDVAGEPMLAHKGMYEGETVAEVIAGEPAAIDYQAMPAVVFTDPEIATVGMTEDEVTDA  387
            +GD AG  +LAHK+ YE+   AEVI+G+ + ID+QAMP V+F+DPE+A  G+TE E  + 
Sbjct  344  IGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEK  403

Query  388  GFEPLVGKFPFRASGRALTTGHADGFVKVVADEESGFLLGASVVGPeasellgelglave  447
            G+E + ++FPF+A++RAL+ ++ADGFV+VVA+ ++  +LG  +VGPE S L++E  +A+E
Sbjct  404  GYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIE  463

Query  448  lgatleDVSGTIHAHPTLSESVMEAAANALDQAIHTLNR  486
             GA  ED+S TIHAHPTL+E++MEAA   +++A H LN+
Sbjct  464  AGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

357) Dgeo_2323 in NC_008025


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  294 bits (1102),  Expect = 7e-81, Method: Compositional matrix adjust.
 Identities = 198/465 (43%), Positives = 329/465 (71%), Gaps = 8/465 (1%)

Query  8    DLLVIGAGPGGYHAAIRGAQLGLKVACAEREALGGVCLNVGCIPTKallhagemmaaahe  67
            DLLVIGAG+GGY AAIR+AQLG KV   ++  LGGVCLN GCIP+KAL+ A+E +    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  68   aaDFGLSF-GEQRLNVAKLNAWKDGIVKRLTGGVGSLFKANKVTHLQGQASFVDPHTVKV  126
            A   GL   GE +++++ +  WKDGIV++LT+G+ +L+K+N V  + G+A + ++H  K+
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  127  ----GDKTYTAANIIIATGSEPARLPGLDVDQQSIVDSTGALVVPDPIPARMLCVGGGVI  182
                 ++ ++  ++I+A GS P  L ++  DQ+ I+ ST AL + + +P +++ VGGG I
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGYI  219

Query  183  GFEFAHVYNNLGSKVKVIEFLPSIIPGADADAVKEFSRAMKKQGIeietetkankaekka  242
            G+E++  Y ++G+KV ++E   +I++G+D+   K   R +K  GI + T++  + +E+ +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  DGIHVELESVKTGEKRVEVFDRVLVAVGRRPRTDGLNVQAAGVTITERGFIPADREQRTN  302
            D ++V+++ V   E  ++  D  LV++GR+P T+ + ++  GV + ++GFI  +   +TN
Sbjct  280  DEVNVHVQ-VDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  303  VPHIYAIGDVAGNPMLAHKAMKEGLVAAEVIAGKPAAQDAVAIPGVVYTSPELAWVGLTE  362
            + H+YAIGD AG  +LAHKA  E+ +AAEVI+G+ +  D  A+P V+++ PE+A  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  363  QEAKDKGYEVKTGTFPFSASGRAMTLQQTDGFVKMVVEKDTDLVLGVHIVGPHASDMLGE  422
            +EAK+KGYE  ++ FPF A++RA+++ ++DGFV++V EK+T  VLGV++VGP+ S +++E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  423  ASLALEMAATATDIALTIHAHPTLGESVLEAAEAVHKQAIHIMNR  467
            A +A+E +A A D++LTIHAHPTL E+++EAAE+V  +A H++N+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

358) lpdV in NC_002516


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  294 bits (1102),  Expect = 8e-81, Method: Compositional matrix adjust.
 Identities = 199/464 (43%), Positives = 316/464 (69%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YASRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGG  185
              + + +   Q +   +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVVVGG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRRLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVR-DGAGEEREIAADQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+ +  G E  I  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAIPAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLVVGWQAVGKAVSELS  420
            +  +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   V+G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

359) BamMC406_1137 in NC_010551


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  294 bits (1101),  Expect = 9e-81, Method: Compositional matrix adjust.
 Identities = 194/466 (42%), Positives = 308/466 (67%), Gaps = 8/466 (1%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVERERLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++  LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QACAQAGEGMLGIRVRAP-EIDIAKSVAWKDGIVDRLTRGVGALLKKHGVRVLQGDARVV  121
            +         +G++V +  ++D++  V WKDGIV++LT G+ +LLK +GV V+ G+A + 
Sbjct  97   HI---KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVDIVAGDHTTRIACEHLLLATGSEPVALPSMPFGG-HVVSSTDALSPALLPTRLVV  180
            ++    I   D+   ++  +L+LA GS PV L SMPF+  +++SST+AL    +P +LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGTVYRKLGVEVSIVEAAERVLPAYDAELAKPVADSLARLGVGLWLGHTVL  240
            VG+GYIGLELGT Y K+G  V+I+E+++ +L++ D+ L+K V   L  +G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  GLASDG-AVRVQAP-DGAQKTLPADRVLVAVGRRPRVDGFGLEALPLDRNGRAL-RIDDA  297
            G  + G  V V+   DG +  +  D  LV++GR+P  + +GLE + +  +++++ +I++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  298  CRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGRRRKFTPASIPAVCFTDPEVVTS  357
            C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   ++P V F+DPEV  +
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  358  GWSPDDAKAAGVDCISASFPFAANGRAMTLQATDGFVRVVARRDTHLIVGWQAVGRGVSE  417
            G +  +AK  G + +S+ FPF AN+RA+++  +DGFV+VVA ++T  ++G Q VG  VS 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  418  LAAAFSQSLEMGARLEDIGGTIHAHPTLGEAMQEAALRALGHALHV  463
            L A    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

360) lpdA in NC_009075


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 206/469 (44%), Positives = 320/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTDALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST+AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

361) lpdA in NC_021877


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 206/469 (44%), Positives = 320/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTDALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST+AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

362) phdD in NC_015859


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 202/468 (44%), Positives = 318/468 (68%), Gaps = 13/468 (2%)

Query  11   VIIGAGPGGYVAAIRAAELGQQVTVIEESDTLGGICLNVGCVPSKALISAGKRLGQAQDS  70
            ++IGAG+GGYVAAIRAA+LG++V +++ ++ LGG+CLN GC+PSKALISA+ R+ + +++
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  71   TMYGIT-TGEVSFDFTALQDWKQHKVVDRMTKGIEGLFAKHEIEVVRGSAMLVSDSEIQI  129
               G+  +GEV  D   +  WK+  +V+++T GI  L+  + +EV+ G A L      +I
Sbjct  102  NTMGLKVSGEVQVDMPEVVKWKD-GIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  130  MPAGPQQFMSVTEPRRIAFTDLIIATGSRPVEIPGFQISG-RVIDSTGGLGLESLPKELV  188
               + +Q+        +++ DLI+A GS PVE+ +  +   R+I ST +L L+ +P++LV
Sbjct  161  KIEDEEQI--------FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  189  VIGGGYIGTELAGAYADFGTHVTILEGTDQILPGFEkdlvkvvvkklkskgvtvlTGVRA  248
            V+GGGYIG EL+ AYA FG+ VTILEG+D IL+G +  L K V + LK  G+TV+T+   
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  249  KHSEQRADEVTVTYATKGGEEKKVTADYCMITVGRTPNTDSLGLDATGVELDKHGLIKVD  308
            + +E+ +DEV V     G EE  +  DYC++++GR PNT+ +GL+  GV LD +G+IK++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  309  ERGFTGVDHIWAVGDVTMGPALAHMAFMEGKTAAGAIAGRPDANEYFAVPAVCFSDPEIA  368
            ++  T ++H+ A+GD + G  LAH A  E+K AA  I+G+    ++ A+P V FSDPE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  369  TVGMTVAEAEKSGLTVHASQFPFAGNARAVSLGEGEGFVRLVSTIDTGTLVGAQIVGPGA  428
              G+T  EA   G    +S+FPF +NARA+S+++++GFV++V+  +T  ++G Q+VGP  
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  429  SDLISELSVAVNCQLNVEDIALTIHPHPTLGEPVAEAADIAIGLPTHL  476
            S LI+E   A++   N ED++LTIH+HPTL EP+ EAA+  +G +TH+
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

363) Mesop_0914 in NC_015675


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 203/462 (44%), Positives = 310/462 (68%), Gaps = 10/462 (2%)

Query  8    LLVIGAGPGGYVSAIRAGQLGVDTVIVEAGKPGGTCLNVGCIPSKALIHAAEEFEKVSHM  67
            LLVIGAG+GGYV+AIRA+QLG   V+V+ +  GG CLN GCIPSKALI A+E   +V H+
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   ADGKSPLGISVAAPT-LDLGKTVAWKDGIVSRLNSGVAGLLKKAGVKTVHGWATFRDGKT  126
             ++++ +G+ V++   +D+   V WKDGIV++L  G+  LLK  GV  + G A + ++  
Sbjct  99   KHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVETETGVQVIRAEAIVIATGSAPVELPFLPFGG-PVISSTEALALNEVPKKLAVVGGG  185
              +  E   Q++    +++A GS PVEL  +PF+   +ISSTEAL L+EVP+ L VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGMAFAKMGTAVTVVEALPRVLAQYDAELTRPVVKRLAQLGVEVMLGAKAKG--V  243
            YIGLELG A+AK G+ VT++E+   +L+  D+ LT+ V ++L ++G+ V+ +A  +G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  KGDALLVETA-DGKSAKIAADKILVTVGRKPVTEGWGLDQIDLDMAGK-FIRIDDQCRTS  301
             GD + V+   DGK   I  D  LV++GRKP T   GL++I++ + ++ FI+I+++C+T+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  302  MRGIFAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRSWDKRSIPAVCFTDPELVTAGLSP  361
            +  ++AIGD +G  +LAH+A  ++ + AE+++G++   D +++P V F+DPE+  +GL+ 
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  362  EEAKALGGEIKIGLFPFAANGRAMTKMGEDGFVRVVARADNHLVLGIQAVGQGVSELSAA  421
             EAK  G E   + FPF AN+RA++  + DGFV+VVA  +   VLG+Q VG  VS L A 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  422  FGLALEMGARLEDIAGTIHAHPTQGEGFQEAALKALGHALHI  463
              +A+E GA  ED++ TIHAHPT  E + EAA   +GHA H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

364) lpdV in NC_011770


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 198/464 (43%), Positives = 316/464 (69%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YAGRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVIGG  185
              + + +   Q +   +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVV+GG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVR-DGAGEERKIAADQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+ +  G E  I  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAIPAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLVVGWQAVGKAVSELS  420
            +  +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   V+G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

365) lpdV in NC_008463


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 199/464 (43%), Positives = 316/464 (69%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YAGRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGG  185
              + + +   Q +   +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVVVGG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVR-DGAGEEREIAADQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+ +  G E  I  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAIPAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLVVGWQAVGKAVSELS  420
            +  +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   V+G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

366) lpdA-3 in NC_013118


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 185/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  AHRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            AH+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

367) lpdA-3 in NC_015858


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 185/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  AHRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            AH+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

368) lpdG in NC_009434


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 193/476 (41%), Positives = 331/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYQGKDGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKVHGISTGEVAMDVPTMVARKDQIVKNLTGGVSALLKANGVTVFEGH  121
             +S +  +  ++  +    +GEV +D+P +V +KD IV++LT+G+ +LLK+NGV V+ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKQVEVTGLDGNVQTLAAENVILASGSTPVNIPPAPVDQKVIVDSTGALDFQSVP  181
            +  L+  ++    ++++ Q ++  ++ILA GS PV++ + P DQK I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVIEAMDKFLPAADEQISKEAFKVLSKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT++E+ D +L+++D  ++K   + L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARLTGSEVKGDQVTVNFTSAEGEQQMTFDKLIVAVGRRPVTTDLLAADAGVDMDERGFI  301
            +A + G+E  GD+V V+      E+ +  D  +V++GR+P T  +   + GV +D++GFI
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKTQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKSEQALKAEGVEVNVGTFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVMG  421
            E+A  G +E+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKK  477
            P  + L+ ++ +++E G++AEDL++ + +HPT++E+L EAA +V GHA H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

369) lpdG in NC_015740


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 193/476 (41%), Positives = 331/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYQGKDGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKVHGISTGEVAMDVPTMVARKDQIVKNLTGGVSALLKANGVTVFEGH  121
             +S +  +  ++  +    +GEV +D+P +V +KD IV++LT+G+ +LLK+NGV V+ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKQVEVTGLDGNVQTLAAENVILASGSTPVNIPPAPVDQKVIVDSTGALDFQSVP  181
            +  L+  ++    ++++ Q ++  ++ILA GS PV++ + P DQK I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVIEAMDKFLPAADEQISKEAFKVLSKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT++E+ D +L+++D  ++K   + L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARLTGSEVKGDQVTVNFTSAEGEQQMTFDKLIVAVGRRPVTTDLLAADAGVDMDERGFI  301
            +A + G+E  GD+V V+      E+ +  D  +V++GR+P T  +   + GV +D++GFI
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKTQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKSEQALKAEGVEVNVGTFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVMG  421
            E+A  G +E+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKK  477
            P  + L+ ++ +++E G++AEDL++ + +HPT++E+L EAA +V GHA H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

370) lpdG in NC_017532


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1099),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 193/476 (41%), Positives = 331/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYQGKDGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKVHGISTGEVAMDVPTMVARKDQIVKNLTGGVSALLKANGVTVFEGH  121
             +S +  +  ++  +    +GEV +D+P +V +KD IV++LT+G+ +LLK+NGV V+ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKQVEVTGLDGNVQTLAAENVILASGSTPVNIPPAPVDQKVIVDSTGALDFQSVP  181
            +  L+  ++    ++++ Q ++  ++ILA GS PV++ + P DQK I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVIEAMDKFLPAADEQISKEAFKVLSKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT++E+ D +L+++D  ++K   + L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARLTGSEVKGDQVTVNFTSAEGEQQMTFDKLIVAVGRRPVTTDLLAADAGVDMDERGFI  301
            +A + G+E  GD+V V+      E+ +  D  +V++GR+P T  +   + GV +D++GFI
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKTQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKSEQALKAEGVEVNVGTFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVMG  421
            E+A  G +E+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKK  477
            P  + L+ ++ +++E G++AEDL++ + +HPT++E+L EAA +V GHA H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

371) bgla_2g03070 in NC_015376


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1097),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 203/462 (44%), Positives = 306/462 (67%), Gaps = 9/462 (1%)

Query  9    LLVIGGGPGGYVAAIRAAQLGVPTVLVERARLGGTCLNIGCIPSKALIHAAEEFDKARHY  68
            LLVIG+G+GGYVAAIRAAQLG   VLV++A LGG CLN GCIPSKALI A+E   + +H 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  69   AKESPLGISVASPA-IDIGRTVAWKDGIVARLTGGIGTLMKRHGVEVLQGEARVIDGKTV  127
               + +G+ V++   +D+   V WKDGIV +LT+GI TL+K +GVEV+ GEA + ++   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  128  EVAREGGEPLRVRGEHLLLAAGSEPVALPSMPFGGI-VQSSTEALSPSSLPRRLVVVGAG  186
             +  E+ E +     +L+LA GS PV L SMPF+   + SSTEAL    +P +LVVVG+G
Sbjct  159  KIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  187  YIGLELAIAYRKLGVEVAVVEAQARILPAWDEALTKPVAASLGKLGIALHLERKVLGLNA  246
            YIGLEL+ AY K+G  V+++E+   IL++ D  LTK V   L  +GI++  +  V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  247  GGDAVRIQ-DAAGAEHALPADRVLVAVGRRPRTQGWGLEALQLDREGHAL-KIDDQCRTS  304
             GD V ++ +  G E+ +  D  LV++GR+P T   GLE + +  +++++ KI+++C+T+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  MRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVSGKRRRFMPAAIPAVCFTDPEVVSVGLAP  364
            + +V AIGD +G  +LAH+A  ++ + AE++SG+   +   A+P V F+DPEV   GL+ 
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  HDAATPE-DALVASFPLSVNSRAMTLESSDGFVRVVARRDDHLILGWQAVGRGVSELSAA  423
             +A     +++ + FP+  N+RA+++  +DGFV+VVA ++   +LG Q VG  VS L A 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  424  FAQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  465
               ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

372) Halar_2852 in NC_015954


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1097),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 190/451 (43%), Positives = 313/451 (70%), Gaps = 6/451 (1%)

Query  26   IRAAQNGLDTTLVDKEAYGGSCLNHGCIPSKAFISATDVAHDARNAEEMGIH--ADPVVD  83
            IRAAQ G    LVDK   GG CLN+GCIPSKA+ISA++   + ++A+ MG+   ++  VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  84   VAAMQDWKEGVVDQLTGGVEKLCKANGVNLVQGEATFVDDSSVRIAHGGEGQGSESINFE  143
            ++ +  WK+G+V++LT+G+  L K+NGV+++ GEA + +    +I   +E Q    +++ 
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQ---IFSYK  172

Query  144  HAIIATGSRPIQVPGFEFTADPVWSSRDALAIDDAPDSLVVVGAGYIGMELSTVFAKLGV  203
            + I+A GS P+++ +  F    + SS +AL +++ P+ LVVVG+GYIG+EL+T +AK+G 
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  204  DVTVVEMLDGVLPGYEDDVSRVVKKRAEALGIEFNFGEAASGWEETENGIVVATENEDGE  263
             VT++E  D +L+G +  +++ VK++   +GI    +    G E+T + + V  +  DG 
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV-DGK  291

Query  264  ESTYDAEKVLVAVGRQPVSESLDPENAGVELTENGFIETDDQTRTNVENIFAVGDVAGEP  323
            E   + +  LV++GR+P +  ++ EN GV L ++GFI  +++ +TN+E+++A+GD AG  
Sbjct  292  EEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGD  351

Query  324  MLAHKASKEGIVAAEVIAGEPAALDQQAVPAAVFTDPEIATVGMTEAEAEEAGFEPKVGQ  383
            +LAHKAS E+ +AAEVI+G+ + +D QA+P  +F+DPE+A  G+TE EA E G+E   ++
Sbjct  352  LLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSR  411

Query  384  FPFRANGRSLTTGESEGFVRIVAEAQAGFILGAQIVGPeaseliaelalaveMGATLEDV  443
            FPF+AN+R+L+ ++++GFV++VAE ++  +LG Q+VGPE S LIAE  +A+E GA  ED+
Sbjct  412  FPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDL  471

Query  444  ASTIHTHPTLAEAVMEAAENADDQAIHTLNR  474
            + TIH+HPTL+E++MEAAE   ++A H LN+
Sbjct  472  SLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

373) G655_13795 in NC_020912


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1097),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 198/464 (43%), Positives = 316/464 (69%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YAGRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGG  185
              + + +   Q +   +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVVVGG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVRDGAGEEREIVA-DQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+   +   EI+  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAIPAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLVVGWQAVGKAVSELS  420
            +  +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   V+G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

374) lpdV in NC_017548


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1096),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 199/464 (43%), Positives = 315/464 (68%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YAGRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRVECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGG  185
              + + +   Q     +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVVVGG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVR-DGAGEEREIAADQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+ +  G E  I  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAIPAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLVVGWQAVGKAVSELS  420
            +  +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   V+G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

375) lpdV in NC_017549


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1096),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 198/464 (43%), Positives = 315/464 (68%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YAGRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGG  185
              + + +   Q +   +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVVVGG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVGVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V ++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVRDGAGEEREIVA-DQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+   +   EI+  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAIPAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLVVGWQAVGKAVSELS  420
            +  +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   V+G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

376) lpdA in NC_010104


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 184/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  THRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            +H+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

377) BCA52141_II0438 in NC_016796


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 184/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  THRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            +H+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

378) lpdA-3 in NC_017250


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 184/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  THRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            +H+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

379) lpdA-3 in NC_004311


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 184/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  THRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            +H+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

380) lpdA in NC_010167


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 184/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  THRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            +H+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

381) lpdA-3 in NC_016775


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 184/446 (42%), Positives = 305/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  THRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            +H+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIHAHPTLGEGFAEASMKALGHALHV  464
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

382) Desru_1663 in NC_015589


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1096),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 191/457 (42%), Positives = 316/457 (70%), Gaps = 6/457 (1%)

Query  6    VVIGGGPGGYVAAIRIAQLGGKVALVEKDQLGGTCLNRGCIPTKSLIAAVDKLKGVEEAA  65
            +VIG+G+GGYVAAIR AQLG KV LV+K +LGG CLNRGCIP+K+LI+A +++K + +A 
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN  102

Query  66   AFGIAVNQPV-VDFNKVQGRKEEVVEKLVSGIQFLLNKNKVDFFKGAAKIKAPGVVEVAG  124
            + G+ V+  V VD   V  +K+ +V+KL  GI+ LL+ N V+ + G A +  + +  +  
Sbjct  103  TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI  162

Query  125  DGETKVLQCENMVIATGSSPALIKSLGYNGTSIITSEEALQLQEIPKSLLIIGAGVIGCE  184
            ++E +++   ++++A GS P  +KS+ ++   II+S EALQLQE+P+ L+++G+G IG E
Sbjct  163  EDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLE  222

Query  185  FAHIYGSLGTEITMVEAAPSILS----LQDKDISRRMQtifkkkkvtiktNGCIKKITEV  240
            ++  Y+ +G+ +T++E++ +ILS    +  K + R+++ I          +G  +   EV
Sbjct  223  LGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEV  282

Query  241  DGGIQAELENGERLTAEKALISIGRVLNTHNLGLSKAGVALGEKGQILVNDQMQTNIKGI  300
            +  +Q +  + E +  +  L+SIGR  NT ++GL + GV L+++G I +N++ QTNI  +
Sbjct  283  NVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHV  341

Query  301  YAIGDVVMKYQLAHVASAQGVIAAENIMGKEAVMDYRAVPSCVFTSPEIASVGMTEQQVK  360
            YAIGD      LAH AS ++ IAAE I G+++V+D++A+P  +F+ PE+A  G+TE++ K
Sbjct  342  YAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAK  401

Query  361  DKGLPVKTGKFNFMANGKALSMGEGDGFVKVVTHAETDRILGVHIIGPHASDLIAEATLA  420
            +KG    +++F F AN++ALS++++DGFV+VV++ +T R+LGV+++GP+ S LIAEA +A
Sbjct  402  EKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFA  461

Query  421  VQKGLTAKELAGVIHAHPTLAEALMEAAENVHGLSIH  457
            ++ G  A +L+  IHAHPTL+E+LMEAAE V G + H
Sbjct  462  IEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

383) PputW619_3510 in NC_010501


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1097),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 196/476 (42%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEIIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +I+   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLASDSGVNIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDHCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

384) Acid345_2790 in NC_008009


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1097),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 192/471 (41%), Positives = 316/471 (68%), Gaps = 4/471 (0%)

Query  4    QKTPNIAVIGGGPGGYAAAFLAADLGMTVTLIDMELNPGGVCLYRGCIPSKALLHVAKLI  63
            +K  ++ VIG+G+GGY AA+ AA+LG  V L+D   + GGVCL RGCIPSKAL+  +  +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKA-ELGGVCLNRGCIPSKALISASERV  95

Query  64   EEAKHSTNWGVTYDAP-KIDLERLRTFKEGVVKKLTGGLGQLSKQRKVTYIQGKATLVDS  122
             + KH+   G+   +  ++D+  +   K+G+V+KLT+G+  L K   V  I G A L ++
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  123  CTVKVEKTAGGEETLHFDKLILATGSRPAVIPAFNIGSPRVMDSTGALNLEDIPKRLLVV  182
               K+ K  + E+ + +  LILA GS P  + +  ++  R++ ST AL+L+++P++L+VV
Sbjct  156  HIAKI-KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  183  GGGYIGLELGSVYAAIGSKVSVVEMTAGLLPGADRDLVAPLHKRLTGIFEAIMLNTTVIS  242
            GGGYIGLELG+ YA +G+KV+++E +  +L+G+D  L   + ++L  I  +++ ++ V +
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  243  IADTGSAVKVKFKTQDGKEEEQTYDRVLVSVGRKPNSQIPGLDKTRVKVNQKGFLQVNPS  302
              +TG  V+V  +  DGKEE    D  LVS+GRKPN+   GL++  V ++++GF+++N  
Sbjct  275  GENTGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  LMTDDPFIYAIGDVVGEPMLAHKASHEGLVAVESIAGHKVAFEPQAIPAVVFTDPEIAWA  362
              T+   +YAIGD  G  +LAHKAS E+ +A E I+G++  ++ QA+P V+F+DPE+A +
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GLTETQAQNEGREVTVTKFPWAASGRAVTIDRTEGLTKLIIDPQTERVLGVGICGPGAGE  422
            GLTE +A++ G E   ++FP  A++RA+++  ++G+ +++ + +T RVLGV + GP  + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIAEGVVAIEMGALAGDIKLSIHPHPTLSETIMEAAEVFYGQSTHIYRPKR  473
            +IAE+V AIE GA A D+ L+IH+HPTL+E +MEAAE   G++TH+   K+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

385) PputGB1_3758 in NC_010322


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1096),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 194/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQTVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDHCATSVPGVFAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  V+AIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

386) L483_23270 in NC_021491


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1096),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 194/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQTVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLASDSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDHCATSVPGVFAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  V+AIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQSLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

387) lpd in NC_021505


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  293 bits (1098),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEIIEADNVILASGSRPIDIPPAPVDQNVIVDSTGALEFQTVP  181
            +  L+   +   K ++  +I+   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLASDSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDHCATSVPGVFAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  V+AIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQSLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

388) lpdA1 in NC_014974


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1094),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 212/470 (46%), Positives = 336/470 (72%), Gaps = 12/470 (2%)

Query  1    MKTY-DLIVIGTGPGGYPAAIRGAQlglkvlaveaaevggvCLNVGCIPTKALLHAAETV  59
            +K Y DL+VIG+G+GGY AAIR+AQLG KV+ V+ AE+GGVCLN GCIP+KAL+ A+E V
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  60   HHLKGAEGFGLKAKPEL--DLKKLGAWRDGVVKKLTGGVAGLLKGNKVELLRGFARFKGP  117
             H+K A+  GLK   E+  D+  +  W+DG+V+KLT+G+  LLKGN VE++ G A +  +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  118  R----EIEVNGETYGAQSFIIATGSEPMPLKGFPFGED-VWDSTRALRVEEGIPKRLLVI  172
            +     IE + + ++ + +I+A GS P+ LK+ PF++  +  ST AL+++E +P++L+V+
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVV  214

Query  173  GGGAVGLELGQIYHRLGSEVTLIEYMPEILPAGDRETAALLRKALEKEGLKVRTGTKAVG  232
            GGG +GLELG  Y ++G+ VT++E    IL++ D   +  +++ L   G+ V T++   G
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  233  YEKKQDGLHVLLEAAQGGSQEEIVVDKILVAVGRRPRTEGLGLEKAGVKVDERGFIQVNA  292
             E+  D ++V ++   +G +E I  D  LV++GR+P T  +GLE+ GV +D++GFI++N 
Sbjct  275  GENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  293  RMETSAPGVYAIGDVARPPLLAHKAMKEGLVAAENAAGKNALFDFQ-VPSVVYTGPEWAG  351
            + +T+   VYAIGD A   LLAHKA  E+ +AAE  +G+N+++DFQ +P V++++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  352  VGLTEEEARKAGYNVKVGKFPFSASGRALTLGGAEGLIKVVGDAETDLLLGVFVVGPQAG  411
             GLTE EA+  GY+   ++FPF A++RAL++++A+G+++VV++ +T  +LGV +VGP+ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  412  ELIAEATLALEMGATVSDLGLTIHPHPTLSEGLMEAAEALHKQAIHILNR  461
             LIAEA +A+E GA   DL+LTIH+HPTL+E LMEAAE++  +A H+LN+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

389) lpdA in NC_009078


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1095),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 206/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

390) lpdA in NC_007435


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1095),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 206/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

391) BPC006_II3011 in NC_018529


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1095),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 206/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

392) mll4470 in NC_002678


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1095),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 203/462 (44%), Positives = 308/462 (67%), Gaps = 9/462 (1%)

Query  8    LLVIGAGPGGYICAIRAGQLGVDTVIVEAGKPGGTCLNVGCIPSKALIHAAEEFEKVAHM  67
            LLVIGAG+GGY+ AIRA+QLG   V+V+ +  GG CLN GCIPSKALI A+E   +V H+
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   AGGKSPLGISVSAPV-LDLGKTIAWKDGIVSRLNSGVAGLLKKAGVKTVHGWAMFRDGKT  126
              +++ +G+ VS+ V +D+   + WKDGIV++L  G+  LLK  GV  + G A + ++  
Sbjct  99   KHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGSQVIRAETIVIATGSAPVELPFLPFGG-PVISSTEALALSVVPKKLAVVGGG  185
              +  E   Q++    +++A GS PVEL  +PF+   +ISSTEAL L  VP+ L VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGMAFAKMGAEVTLVEALPRVLAQYDAELTRPVVKRLAALGVEVMTEAKAKGLST  245
            YIGLELG A+AK GA VT++E+   +L+  D+ LT+ V ++L  +G+ V+T+A  +G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  KGDALLVET-ADGKNTKVSADKILVTVGRKPVTEGWGLDQIDLDMSGK-FIRIDDQCRTS  303
             GD + V+   DGK+  +  D  LV++GRKP T   GL++I++ + ++ FI+I+++C+T+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  304  MRGIFAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRNWDKRAIPAVCFTDPELVTVGLSP  363
            +  ++AIGD +G  +LAH+A  ++ + AE+++G++   D +A+P V F+DPE+   GL+ 
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  364  EEAKAQG-EIKIGLFPFAANGRAMTKLGEDGFVRVVARADNHLVLGIQAVGQGVSELSTA  422
             EAK +G E   + FPF AN+RA++  + DGFV+VVA  +   VLG+Q VG  VS L + 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  423  FGLALEMGARLEDIAGTIHAHPTQGEGFQEAALKALGHALHI  464
              +A+E GA  ED++ TIHAHPT  E + EAA   +GHA H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

393) LVIS_1407 in NC_008497


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1094),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 201/470 (43%), Positives = 332/470 (71%), Gaps = 13/470 (2%)

Query  8    DTVIIGAGPGGYVAAIRASELGQKVTLIEKSDTLGGVCLNVGCVPSKALIQAGHRLEQAK  67
            D ++IGAG+GGYVAAIRA++LG+KV L++K++ LGGVCLN GC+PSKALI A++R+ + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   DGSTYGISTDSAT-IDFKKTQEWKQKKVVDRMTSGVKMLMKKHHVDVVSGEAVFLSDTQL  126
            +++T G+   +   +D      WK+  +V+++T G++ L+K + V+V+SGEA +L+++++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  127  RVMPTGEKQFMSTDTGQTFEFNNIIIASGSHPIQIPGFKFDG-RVVDSTGGLNLPEIPKE  185
              +   + +       Q F ++++I+A GS P+++ +  FD  R++ ST +L+L E+P++
Sbjct  158  AKIKIEDEE-------QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  186  FVVIGGGYVGTELAGAYASLGAHVTILEGSPSILPNFEkdmvsvvlkklkkkgvdvITNA  245
            +VV+GGGY+G EL+ AYA +GA VTILEGS +IL+  +  +   V + LK  G+ VIT+A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  246  MAKsssqddqsvsvTYAVDGKESTIKADYCMVTVGRRPNTDDLGLEYTKVELNDHGQIKV  305
            + +++ + ++ V+V   VDGKE  I+ DYC+V++GR+PNT+ +GLE   V L+D+G IK+
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  306  DNQGRTASEHIWAVGDVVPgaalahkafaeaktaagaiagkktaNDWLSVPAVCFSDPEI  365
            +N+ +T  EH+ A+GD   G  LAHKA  EAK AA  I+G+++  D  ++P V FSDPE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  366  ATVGYSESAAKDKGIKVKTAKFPFAGNARAVSLDSPDGFVRFIYTDDDNQNIVGAEAVGP  425
            A  G +E  AK+KG    +++FPF +NARA+S+  +DGFV+ + ++ + + ++G + VGP
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVV-AEKNTKRVLGVQMVGP  449

Query  426  EASTMAGELSVIVNDGLNVEDVALTIHPHPTLNEPIQETADIALGFPTHI  475
            E S++ +E    ++ G N ED++LTIH+HPTL EP+ E+A+  +G +TH+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

394) LVISKB_1352 in NC_020819


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1094),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 201/470 (43%), Positives = 332/470 (71%), Gaps = 13/470 (2%)

Query  8    DTVIIGAGPGGYVAAIRASELGQKVTLIEKSDTLGGVCLNVGCVPSKALIQAGHRLEQAK  67
            D ++IGAG+GGYVAAIRA++LG+KV L++K++ LGGVCLN GC+PSKALI A++R+ + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   DGSTYGISTDSAT-IDFKKTQEWKQKKVVDRMTSGVKMLMKKHHVDVVSGEAVFLSDTQL  126
            +++T G+   +   +D      WK+  +V+++T G++ L+K + V+V+SGEA +L+++++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  127  RVMPTGEKQFMSTDTGQTFEFNNIIIASGSHPIQIPGFKFDG-RVVDSTGGLNLPEIPKE  185
              +   + +       Q F ++++I+A GS P+++ +  FD  R++ ST +L+L E+P++
Sbjct  158  AKIKIEDEE-------QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  186  FVVIGGGYVGTELAGAYASLGAHVTILEGSPSILPNFEkdmvsvvlkklkkkgvdvITNA  245
            +VV+GGGY+G EL+ AYA +GA VTILEGS +IL+  +  +   V + LK  G+ VIT+A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  246  MAKsssqddqsvsvTYAVDGKESTIKADYCMVTVGRRPNTDDLGLEYTKVELNDHGQIKV  305
            + +++ + ++ V+V   VDGKE  I+ DYC+V++GR+PNT+ +GLE   V L+D+G IK+
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  306  DNQGRTASEHIWAVGDVVPgaalahkafaeaktaagaiagkktaNDWLSVPAVCFSDPEI  365
            +N+ +T  EH+ A+GD   G  LAHKA  EAK AA  I+G+++  D  ++P V FSDPE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  366  ATVGYSESAAKDKGIKVKTAKFPFAGNARAVSLDSPDGFVRFIYTDDDNQNIVGAEAVGP  425
            A  G +E  AK+KG    +++FPF +NARA+S+  +DGFV+ + ++ + + ++G + VGP
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVV-AEKNTKRVLGVQMVGP  449

Query  426  EASTMAGELSVIVNDGLNVEDVALTIHPHPTLNEPIQETADIALGFPTHI  475
            E S++ +E    ++ G N ED++LTIH+HPTL EP+ E+A+  +G +TH+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

395) PADK2_14025 in NC_018080


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1095),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 197/464 (43%), Positives = 316/464 (69%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YASRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGG  185
              + + +   Q +   +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVVVGG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVR-DGAGEEREIAADQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+ +  G E  I  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAISAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A++ V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLDCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLIIGWQAVGKAVSELS  420
            +  +AK+ G + + + FPF AN+RA+++   +GFV+VVA ++   ++G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

396) M062_11770 in NC_021577


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1095),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 198/464 (43%), Positives = 315/464 (68%), Gaps = 12/464 (2%)

Query  8    SLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTCLNVGCIPSKALIHAAEEYLKARH  67
             LL++G+G+GGYVAAIRA+QLG   VLV+ A LGG CLN GCIPSKALI A+E   + +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKH  97

Query  68   YAGRSALGIQVQAP-SIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKS  126
                +++G++V +   +D++  V WKD+IV++LT G+ +LLK +GV+V+ G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGG  185
              + + +   Q +   +L+LA GS +VEL  +P++ K +ISSTEAL    +P++LVVVGG
Sbjct  158  AKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  186  GYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRKLGVELYLGHSLLGPS  245
            GYIGLELGTAY K+G  V+++E+   IL+G D  LTK V + L+ +G+ + + ++L+  +
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGG  275

Query  246  ENG---VRVR-DGAGEEREIAADQVLVAVGRKPRSEGWNLESLGLDMNGRA-VKVDDQCR  300
            EN    V V+ +  G E  I  D  LV++GRKP +    LE++G+ +++++ +K++++C+
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIAGKRRQFAPVAIPAVCFTDPEVVVAGL  360
            T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPEV  +GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  SPEQAKDAGLGCLVASFPFAANGRAMTLEANEGFVRVVARRDNHLIIGWQAVGKAVSELS  420
            +  +AK+ G   + + FPF AN+RA+++   +GFV+VVA ++   ++G Q VG  VS L 
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  TAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI  464
            +    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

397) A458_11460 in NC_018028


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1094),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 191/476 (41%), Positives = 332/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYQGKDGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKVHGISTGEVAMDVPTMVARKDQIVKNLTGGVSALLKANGVTVFEGH  121
             +S +  +  ++  +    +GEV +D+P +V +KD IV++LT+G+ +LLK+NGV V+ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKQVEVTGLDGNVQTLAADNVILASGSTPVNIPPAPVDQNVIVDSTGALDFQSVP  181
            +  L+  ++    ++++ Q ++  ++ILA GS PV++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVIEAMEKFLPAADEQISKEAFKVLSKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT++E+ + +L+++D  ++K   + L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARLTGSEVKGDQVTVNFTSAEGEQQMTFDKLIVAVGRRPVTSELLAADAGVDMDERGFI  301
            +A + G+E  GD+V V+      E+ +  D  +V++GR+P T+ +   + GV +D++GFI
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKTQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKSEQALKAEGVEVNVGTFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVMG  421
            E+A  G +E+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKK  477
            P  + L+ ++ +++E G++AEDL++ + +HPT++E+L EAA +V GHA H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

398) Mesau_00865 in NC_019973


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1093),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 207/463 (45%), Positives = 307/463 (67%), Gaps = 10/463 (2%)

Query  8    LLVIGAGPGGYVCAIRAGQLGVDTVIVEVAKPGGTCLNVGCIPSKALIHAAEEFEKVSHM  67
            LLVIGAG+GGYV AIRA+QLG   V+V+ A  GG CLN GCIPSKALI A+E   +V H+
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHI  98

Query  68   AGGNSPLGISVTAPV-LDLARTIAWKDGIVSRLNSGVAGLLKKAGVKTVHGWARFRDGKT  126
              +N+ +G+ V++ V +D++  + WKDGIV++L  G+  LLK  GV  + G A + ++  
Sbjct  99   KHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  127  VEVETETGSQVIRAETIVIATGSAPVELSFLPFGG-PVISSTDALALSEVPRKLAVVGGG  185
              +  E   Q++    +++A GS PVEL  +PF+   +ISST+AL L EVP  L VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  YIGLELGMAFAKMGAGVTVVEALPRVLAQYDAELTRPVVKRLSALGVEVMLGAKAKGLST  245
            YIGLELG A+AK GA VT++E+   +L+  D+ LT+ V ++L  +G+ V+ +A  +G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  DGDALLVETS-DGKSTKVAADKVLVTVGRKPVTEGWGLDQID--LDRARKFIRIDDQCRT  302
             GD + V+   DGK   +  D  LV++GRKP T   GL++I+  LD  + FI+I+++C+T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD-DQGFIKINNKCQT  336

Query  303  SMRGVFAIGDVTGEPMLAHRAMAQGEMVAEIVAGHKRGWDKRSIPAVCFTDPELVTAGLS  362
            ++  V+AIGD +G  +LAH+A  ++ + AE+++G++   D +++P V F+DPE+  +GL+
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  PEEAKAQGGEIKIGLFPFAANGRAMTKLGEDGFVRVVARADNHLVLGIQAVGQGVSELSA  422
              EAK +G E   + FPF AN+RA++  + DGFV+VVA  +   VLG+Q VG  VS L A
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  VFGLALEMGARLEDIAGTIHAHPTQGEGFQEAALKALGHALHI  465
               +A+E GA  ED++ TIHAHPT  E + EAA   +GHA H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

399) BMAA2010 in NC_006349


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 205/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKVD  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +K++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

400) BMA10229_1319 in NC_008835


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 205/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKVD  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +K++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

401) BMA10247_A2299 in NC_009079


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 205/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKVD  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +K++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

402) BMASAVP1_1033 in NC_008784


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 205/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKVD  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +K++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

403) lpdV in NC_017832


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 205/469 (44%), Positives = 319/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKVD  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +K++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
             +GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

404) Psest_2492 in NC_019936


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 193/476 (41%), Positives = 331/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYQGKDGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKVHGISTGEVAMDVPTMVARKDQIVKNLTGGVSALLKANGVTVFEGH  121
             +S +  +  ++  +    +GEV +D+P +V +KD IV++LT+G+ +LLK+NGV V+ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKQVEVTGLDGNVQTLAAENVILASGSTPVNIPPAPVDQKVIVDSTGALDFQGVP  181
            +  L+  ++    ++++ Q ++  ++ILA GS PV++ + P DQK I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVIEAMDKFLPAADEQISKEAFKILSKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT++E+ D +L+++D  ++K   + L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARLTGSEVKGDQVTVSFTSAEGEQQMTFDKLIVAVGRRPVTSELLAADTGVDMDERGFI  301
            +A + G+E  GD+V V       E+ +  D  +V++GR+P T+ +   + GV +D++GFI
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKTQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKSEQVLKAEGVEVNVGTFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVMG  421
            E+A  G +E+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKK  477
            P  + L+ ++ +++E G++AEDL++ + +HPT++E+L EAA +V GHA H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

405) YSA_08443 in NC_017986


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 196/476 (42%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEIIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +I+   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

406) Pput_1667 in NC_009512


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  292 bits (1092),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 196/476 (42%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEIIETENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +I+   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLASDSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

407) lpdV in NC_006351


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1091),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 206/469 (44%), Positives = 318/469 (68%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTQAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARvv  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  dgktvdvdtgggARVRIQCEHLLLAAGSEPVELPAMPFGGN-VISSTGALSPGRLPKRLV  181
            ++    +   +  ++ +   +L+LA GS PVEL +MPF+ + +ISST AL    +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVEVSVVEARERILPIYDAELTKPVAASLKRLGVRVLLGHKV  241
            VVG+GYIGLELG AY K+G  V+++E+ + IL+  D+ LTK V   LK +G+ V+ +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNARGDAVCVQDDAHAQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + +++ E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DMCRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFMPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SVGLAPDEA-ERTFGACVSASFPFAANGRALTLESADGFVRVVARRDDHLIVGWQAVGAG  417
              GL+  EA E+ + + VS+ FPF AN+RAL++  ADGFV+VVA ++   ++G Q VG+ 
Sbjct  392  YTGLTEKEAKEKGYET-VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

408) Deima_2793 in NC_014958


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1091),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 206/465 (45%), Positives = 320/465 (69%), Gaps = 9/465 (1%)

Query  5    DVLVIGGGPAGYVAAIRAAQLGFKTACVDAFERNGKASLGGTCLNVGCIPSKAMLDSSEK  64
            D+LVIG+G++GYVAAIRAAQLG K   VD      KA LGG CLN GCIPSKA++ +SE+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD------KAELGGVCLNRGCIPSKALISASER  94

Query  65   FEMITHEADEHGIVVDGA-RVDLNKMLARKDAVVDKLTGGIQFLFKKNKIKSYHGYGRLV  123
               I H A+  G+ V G  +VD+  ++ +KD++V+KLT+GI+ L+K N +    G + L 
Sbjct  95   VKHIKH-ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  124  RREGDAWIVDAAGEEVSAKNVIVATGSNPRALPLAPFGG-HIVENSGALALTEVPQRLGV  182
              +     ++   +  S K++I+A GS P  L   PF+  +I+ ++ AL L EVP++L V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  183  IGAGVIGVELGSVWRRLGAQVTVLEALPGFLLPADDAVSKEALKHLKKQGLDFHFSVNVK  242
            +G+G IG+ELG+   ++GA+VT+LE+   +L  +D  ++K   +HLK  G+       V+
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  243  DVQQSDAGVTVTYEENGQSVTAQFDKLIVSIGRVPNTQGLGAQDVGLTLDERGFVKIDDH  302
            + ++++  V V  + +G+    Q D  +VSIGR PNT  +G +++G+ LD++GF+KI++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  YRTNLPGVYAIGDVVGGAMLAHKAEDEGVAVAEIIAGQAGHVNYDAIPWVIYTSPEIAWV  362
             +TN+  VYAIGD  GG +LAHKA  E+   AE+I+GQ + ++++A+P VI++ PE+A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GLTEQGAKAQGLEVRTGQFPFAANGRALGHNDSRGFVKVVADAKSDKILGVHMVGPNVSE  422
            GLTE+ AK +G E  +++FPF AN+RAL+ +D+ GFV+VVA+ ++ ++LGV+MVGP+VS 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  LIAEAVSVMEFGGSAEDLARTVHAHPTLSEAVKEAALAVDKRALH  467
            LIAEAV  +E G++AEDL+ T+HAHPTL+E++ EAA +V  +A H
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

409) Bcen_0765 in NC_008060


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1091),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 197/467 (43%), Positives = 310/467 (67%), Gaps = 10/467 (2%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVERDRLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++  LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QACGHAGEAALGIRVRTP-EIDIAKSVAWKDGIVDRLTRGVGALLKKNGVRVLHGEARVI  121
            +   HA   ++G++V    ++D++  V WKDGIV++LT G+ +LLK NGV V+ GEA + 
Sbjct  97   HI-KHA--NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVEVVSGGHTVRIGCEHLLLATGSEPVELPSMPFGG-HVVSSTDALSPATLPKRLVV  180
            ++    +   ++   ++  +L+LA GS PVEL SMPF+  +++SST+AL    +P++LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGIVYRKLGVDVSVVEAAERVLPAYDAELVRPVADSLARLGVRLWLGHTVL  240
            VG+GYIGLELG  Y K+G  V+++E+++ +L++ D+ L + V   L  +G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  GLDEHG-AVRVRA-ADGAEQTLPADRVLVAVGRRPRVDGFGLETL--MLDRNGRALRIDD  296
            G ++ G  V V+   DG E+ +  D  LV++GR+P  + +GLE +  +LD +G  ++I++
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINN  332

Query  297  ACRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGRRRQFTPAAIPAVCFTDPEIVT  356
             C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPE+  
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  357  AGWSPDDAHAAGVDCLSASFPFAANGRAMTLQATDGFVRVVARRDNHLIVGWQAVGRGVS  416
            +G +  +A   G + +S+ FPF AN+RA+++  +DGFV+VVA ++   ++G Q VG  VS
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  417  ELAAAFSQSLEMGARLEDIGGTIHAHPTLGEALQEAALRALGHALHV  463
             L A    ++E GA  ED++ TIHAHPTL E+L EAA   +GHA H+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

410) Bcen2424_1246 in NC_008542


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1091),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 197/467 (43%), Positives = 310/467 (67%), Gaps = 10/467 (2%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVERDRLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++  LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QACGHAGEAALGIRVRTP-EIDIAKSVAWKDGIVDRLTRGVGALLKKNGVRVLHGEARVI  121
            +   HA   ++G++V    ++D++  V WKDGIV++LT G+ +LLK NGV V+ GEA + 
Sbjct  97   HI-KHA--NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVEVVSGGHTVRIGCEHLLLATGSEPVELPSMPFGG-HVVSSTDALSPATLPKRLVV  180
            ++    +   ++   ++  +L+LA GS PVEL SMPF+  +++SST+AL    +P++LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGIVYRKLGVDVSVVEAAERVLPAYDAELVRPVADSLARLGVRLWLGHTVL  240
            VG+GYIGLELG  Y K+G  V+++E+++ +L++ D+ L + V   L  +G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  GLDEHG-AVRVRA-ADGAEQTLPADRVLVAVGRRPRVDGFGLETL--MLDRNGRALRIDD  296
            G ++ G  V V+   DG E+ +  D  LV++GR+P  + +GLE +  +LD +G  ++I++
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINN  332

Query  297  ACRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGRRRQFTPAAIPAVCFTDPEIVT  356
             C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPE+  
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  357  AGWSPDDAHAAGVDCLSASFPFAANGRAMTLQATDGFVRVVARRDNHLIVGWQAVGRGVS  416
            +G +  +A   G + +S+ FPF AN+RA+++  +DGFV+VVA ++   ++G Q VG  VS
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  417  ELAAAFSQSLEMGARLEDIGGTIHAHPTLGEALQEAALRALGHALHV  463
             L A    ++E GA  ED++ TIHAHPTL E+L EAA   +GHA H+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

411) lpd in NC_008027


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1090),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 328/476 (69%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGFSTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG     ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEIIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQSVP  181
            +  L+   +   K ++  +I+   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDHCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

412) lpdG in NC_017530


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1090),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLASDSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

413) lpdG in NC_018220


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1091),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

414) B479_17855 in NC_019905


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1091),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTDANGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

415) lpdG in NC_002947


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1090),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLASDSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

416) PPS_3588 in NC_015733


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1091),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 329/476 (70%), Gaps = 9/476 (1%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGH  121
             +S + K+ K++  +    +GEV++D++ +V +K GIV++LT+G+ TL+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVP  181
            +  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIKL  241
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L ++D  ++K  ++ L   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSKVNGNEVEVTYTDANGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGYI  301
            +A V G+   G+EV+V       E+ I  D  +V++GR+P T  +   + GV +D++G+I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  FVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHP  361
             +++ C T++  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIG  421
            E+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKK  477
            P  + L+ ++ +A+E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

417) lpdV in NC_011000


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  291 bits (1089),  Expect = 7e-80, Method: Compositional matrix adjust.
 Identities = 197/468 (43%), Positives = 312/468 (67%), Gaps = 12/468 (2%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVERDRLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++  LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QACGHAGEGALGIRVRAP-EIDIAKSVAWKDGIVDRLTRGVGALLKKSGVRVLHGEARVI  121
            +   HA   ++G++V +  ++D++  V WKDGIV++LT G+ +LLK +GV V+ GEA + 
Sbjct  97   HI-KHAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVEVVSAGHAVRIGCEHLLLATGSEPVELPSMPFGG-HVVSSTDALSPATLPKRLVV  180
            ++    +   ++   ++  +L+LA GS PVEL SMPF+  +++SST+AL    +P++LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGIVYRKLGVDVSVVEAAERVLPAYDAELVRPVADSLARLGVRLWLGHKVL  240
            VG+GYIGLELG  Y K+G  V+++E+++ +L++ D+ L + V   L  +G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  GLDKHG---AVRVQAADGAEQTLPADRVLVAVGRRPRVDGFGLETL--MLDRNGRALRID  295
            G ++ G    V+VQ  DG E+ +  D  LV++GR+P  + +GLE +  +LD +G  ++I+
Sbjct  274  GGENTGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKIN  331

Query  296  DTCRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGRRRQFMPAAIPAVCFTDPEIV  355
            + C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   A+P V F+DPE+ 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  356  TAGWSPDDAHAAGVDCLSASFPFAANGRAMTLQATDGFVRVVARRDNHLIVGWQAVGRGV  415
             +G +  +A   G + +S+ FPF AN+RA+++  +DGFV+VVA ++   ++G Q VG  V
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  416  SELAAAFSQSLEMGARLEDIGGTIHAHPTLGEALQEAALRALGHALHV  463
            S L A    ++E GA  ED++ TIHAHPTL E+L EAA   +GHA H+
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

418) Bcenmc03_1219 in NC_010508


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  290 bits (1086),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 195/467 (42%), Positives = 309/467 (67%), Gaps = 10/467 (2%)

Query  3    NEHTTLLVIGGGPGGYVAAIRAGQLGIPTVLVERDRLGGTCLNIGCIPSKALIHVADAFE  62
            +    LLVIG+G+GGYVAAIRA+QLG   VLV++  LGG CLN GCIPSKALI  ++   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  63   QACGHAGEAALGIRVRTP-EIDIAKSVAWKDGIVDRLTRGVGALLKKNGVRVLHGEARVI  121
            +   HA   ++G++V    ++D++  V WKDGIV++LT G+ +LLK NGV V+ GEA + 
Sbjct  97   HI-KHA--NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  122  DGKTVEVVSGGHAVRIGCEHLLLATGSEPAELPSMPFGG-HVVSSTDALSPATLPKRLVV  180
            ++    +   ++   ++  +L+LA GS P EL SMPF+  +++SST+AL    +P++LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  181  VGAGYIGLELGIVYRKLGVDVSVVEAAERVLPAYDAELVRPVADSLARLGVRLWLGHTVL  240
            VG+GYIGLELG  Y K+G  V+++E+++ +L++ D+ L + V   L  +G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  241  GLDEHG-AVRVRA-ADGAEQTLPADRVLVAVGRRPRVDGFGLETL--MLDRNGRALRIDD  296
            G ++ G  V V+   DG E+ +  D  LV++GR+P  + +GLE +  +LD +G  ++I++
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG-FIKINN  332

Query  297  ACRTSMRNVWAIGDVAGEPMLAHRAMAQGEMVAELIAGRRRQFTPASIPAVCFTDPEIVT  356
             C+T++ +V AIGD AG  +LAH+A  ++ + AE+I+G+   +   ++P V F+DPE+  
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  357  AGWSPDDAHAAGVDCLSASFPFAANGRAMTLQATDGFVRVVARRDNHLIVGWQAVGRGVS  416
            +G +  +A   G + +S+ FPF AN+RA+++  +DGFV+VVA ++   ++G Q VG  VS
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  417  ELAAAFSQSLEMGARLEDIGGTIHAHPTLGEALQEAALRALGHALHV  463
             L A    ++E GA  ED++ TIHAHPTL E+L EAA   +GHA H+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

419) lpdA-2 in NC_007650


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  290 bits (1085),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 209/469 (45%), Positives = 321/469 (69%), Gaps = 12/469 (2%)

Query  4    TKTTTLLVIGGGPGGYVAAIRAGQLGVRTILVERDRLGGTCLNIGCIPSKALIHAAGEFD  63
             K   LLVIG+G+GGYVAAIRA+QLG + +LV++  LGG CLN GCIPSKALI A+   +
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---E  93

Query  64   KVRGFAGDSPLGIRTEAPA-IDIARTVAWKDGIVKKLTGGVGALLKKNGVEVVHGDARVV  122
            +V+ +   + +G++  +   +D++  V WKDGIV+KLT+G+ +LLK NGVEV+ G+A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  DGKTVEVDMGDGARMRIECEHLLLAAGSEPVELPAMPFGGN-VISSTEALSPRVLPKRLV  181
            ++    + + D  ++ +   +L+LA GS PVEL +MPF+ + +ISSTEAL  + +P++LV
Sbjct  154  EAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VVGAGYIGLELGIAYRKLGVDVTVVEARERILPIYDAELTKPVAASLKRLGVRVHLGHEV  241
            VVG+GYIGLELG AY K+G  VT++E+ + IL+  D+ LTK V   LK +G+ V  +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  242  LGLNargdavrvrddrHEQTELAA-DQVLVTVGRRPRTQGWGLETLQ--LDRAGAALKID  298
             G +  GD V V+ + + + E+   D  LV++GR+P T   GLE +   LD  G  +KI+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKIN  331

Query  299  DACRTSMRNVWAIGDLTGEPMLAHRAMAQGEMVAEIVAGKKRHFVPAAIAAICFTDPEVV  358
            + C+T++ +V AIGD +G  +LAH+A  ++ + AE+++G++  +   A++ + F+DPEV 
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SAGLAPDEA-ERAFGECLSASFPFAANGRALTLEGADGFVRVVARRDDHLIVGWQAVGVG  417
             +GL+  EA E+++ E +S+ FPF AN+RAL++ +ADGFV+VVA ++   ++G Q VG  
Sbjct  392  YTGLTEKEAKEKGY-ETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  418  VSELAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVMEAALRALGHALHI  466
            VS L A    ++E GA  ED++ TIHAHPTL E++MEAA   +GHA H+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

420) Oant_3554 in NC_009668


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  290 bits (1084),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 188/445 (43%), Positives = 301/445 (68%), Gaps = 5/445 (1%)

Query  23   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHHLSVFASKGALGITAQNPAI  82
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++   H+    + G L ++++   +
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMG-LKVSGEVQ-V  114

Query  83   DFARTLEWKDGIVSRLNGGVAGLLKRSRVRMFHGQARFLDGKTVLVETDTGRQTIHAENI  142
            D +  + WKDGIV++L +G+  LLK + V ++ G+A + ++    +  +   Q +   ++
Sbjct  115  DMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDL  174

Query  143  VIATGSVPVEIQALPFGGK-VISSTEALSLEKVPEKLAIVGGGYIGLEIGTAFAKLGAKV  201
            ++A GS+PVE++++PF+ K +ISSTEAL L+ VP+ L +VGGGYIGLE+GTA+AK+GAKV
Sbjct  175  ILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKV  234

Query  202  TVVEATDRILPQYDAELTRPVMARLKALGVEVLTSTSAKGLSKDEAGLEV-LTADGATKT  260
            T++E++D IL+  D+ LT+ V  +LK +G+ V+T +  +G  +    ++V +  DG    
Sbjct  235  TILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEI  294

Query  261  IEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDERCRTSMRGVYAIGDVTGEPMLA  319
            I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  VYAIGD +G  +LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  320  HRAMAQGEMVAEIIVGGNQLWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHEIQVGIFPF  379
            H+A  ++ + AE+I G N + D + +P V F+DPE+   GL+  EA+  G E   + FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  380  QANGRAMTIEREDGMIRVVARADNHLILGIQAVGVGISELSSSFAQAVEMGARLEDIAGT  439
            QAN+RA+++   DG ++VVA  +   +LG+Q VG  +S L +    A+E GA  ED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  440  IHAHPTLSEGFAEASMKALGHALHI  464
            IHAHPTL+E + EA+   +GHA H+
Sbjct  475  IHAHPTLPEPLMEAAEGVMGHATHM  499

421) DR_2526 in NC_001263


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  290 bits (1084),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 198/475 (42%), Positives = 323/475 (68%), Gaps = 10/475 (2%)

Query  9    LRSDMDTF-DVLVIGGGPAGYVAAIRAAQLGFKTACVDAFERGGKPSLGGTCLNVGCIPS  67
            + +++  + D+LVIG+G++GYVAAIRAAQLG K   VD      K+ LGG CLN GCIPS
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVD------KAELGGVCLNRGCIPS  85

Query  68   KALLDSSERFEMISHDTAEHGIQVA-QPQIDVSKMLARKDGVVDKLTGGVAFLFRKNKVT  126
            KAL+ +SER   I H  +  G++V+ + Q+D++ ++ +KDG+V+KLT+G+  L++ N V 
Sbjct  86   KALISASERVKHIKHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE  144

Query  127  SFHGYGKLVRQDGQEWVVDAAGTEVKAKNVIVATGSNPRALPGVPFGG-HIVENSGALQI  185
             + G + L   +     ++        K++I+A GS P  L ++PF+  +I+ ++ ALQ+
Sbjct  145  VISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQL  204

Query  186  DQVPGKLGVIGAGVIGLELGSVWRRLGAQVTILEAMPGFLMAADDAIAKEALKQFQKQGL  245
            ++VP  L V+G+G IGLELG+   ++GA+VTILE+   +L ++D  ++K   ++++  G+
Sbjct  205  QEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGI  264

Query  246  DFHFGVKIGEIKQDDSGVTVTYEENGSQVTAQFDKLIVSIGRVPNTGGLNADGVGLALDE  305
                +  +    + +  V V  + +G +   Q D  +VSIGR PNTG +  + +G+ LD+
Sbjct  265  TVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDD  324

Query  306  RGFVKVDQHYRTNLPGVYAIGDVIGGAMLAHKAEEEGVALAEMIAGQAGHVNYDVIPWII  365
            +GF+K+++  +TN+  VYAIGD  GG +LAHKA  E+   AE+I+GQ + ++++ +P +I
Sbjct  325  QGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVI  384

Query  366  YTSPEIAWAGLTEKQAKERGLNVKTGQFPFSANGRALGHGDPRGFVKVVADAQTDKLLGV  425
            ++ PE+A +GLTEK+AKE+G +  +++FPF AN+RAL+ +D+ GFV+VVA+ +T ++LGV
Sbjct  385  FSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGV  444

Query  426  HMIGGGVSELIGEIVAIMEFGGSAEDLARTIHAHPTLSEVVKEAALAVDKRAIHM  480
            +M+G  VS LI+E V  +E G++AEDL+ TIHAHPTL+E + EAA +V  +A HM
Sbjct  445  QMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

422) Plabr_4534 in NC_015174


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  289 bits (1083),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 188/460 (41%), Positives = 316/460 (69%), Gaps = 3/460 (0%)

Query  15   DVVVLGAGPGGYPAAFEAADHGKKTILVNDDVAPGGVCLNRGCIPSKALLHVAKLLHESH  74
            D++V+GAG+GGY AA+ AA+ GKK +LV D    GGVCLNRGCIPSKAL+  +  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLV-DKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  75   EAAEWGITFE-KPKIDLDKLRDYKNGVVTGLTGGVRQLCKARKVQLEEARGTFLSSNLME  133
            +A   G+      ++D+  +   K+G+V  LT+G+R L K+  V++  +  ++L+   + 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  134  LSYKDGSKKTLSFDKAIVATGSVPAMPPIFKLDDDRVMDSTGALELKDIPGKLLVIGGGY  193
                ++  + +S+   I+A GS+P       +D+ R++ ST AL+L+++P  L+V+GGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  194  IGLEMGSVYAALGSEVTVVEMLDGLLPGADRDLVKPLQKRLEKQLHAIHLNTKVLGLEAT  253
            IGLE+G+ YA +G+ VT++E  D +L+G+D  L K ++++L     ++  ++ V G E T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  254  KAGIVARLEGENAPEEETFDRVLISIGRRPNAQNIGLDKTKVQIDEKGFIKVNSKLQTDD  313
               +  +++ +   E    D  L+SIGR+PN+ +IGL++  V +D++GFIK+N+K QT+ 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  314  PQIYAIGDVAGEPMLAHKATREAKVAVDVILGEPAEFDVRAIPAVVFTDPELAWCGVTER  373
             ++YAIGD AG  +LAHKA+ EAK+A +VI G+ + +D +A+P V+F+DPE+A  G+TE+
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  374  EAKEQGLDVTVVRFPWAASGRAQTIDRTEGLTKLIFENKTERILGMGIVGPGAGEMIAEG  433
            EAKE+G +    RFP  A++RA ++  ++G+ +++ E++T R+LG+ +VGP  + +IAE+
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  434  VLAVETAAVARDLAESIHAHPTLSETIMESAEGMFAQATH  473
            V+A+E++A A DL+ +IHAHPTL+E +ME+AEG+ ++ATH
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

423) lpdA-3 in NC_006933


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  289 bits (1082),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 183/446 (42%), Positives = 304/446 (69%), Gaps = 7/446 (1%)

Query  20   RAGQLGIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHCLTTFAAKSPLGIT-TQNPA  78
            RA+QLG   VLV+K+ LGG CLN GCIPSKALI A++    +  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKVSGEVQ  113

Query  79   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  138
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  139  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  197
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  198  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  256
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  257  AIEADKILVTVGRKPQSDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  315
             I+ D  LV++GRKP+++  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  316  AHRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  375
            AH+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  376  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  435
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  436  TIHAHPTLGEGFAEASMKALGHALHV  461
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

424) lpd in NC_021499


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  288 bits (1080),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 196/480 (41%), Positives = 326/480 (68%), Gaps = 17/480 (3%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQDKEGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKY----HEAHEGFKIHGIEAKGVTIDVPAMVGRKNTIVKNLTGGVSTLFKANGVTL  117
             +S +     H    G+K+ G     V +D+P +V +K+ IV++LT+G+ TL+K+NGV +
Sbjct  90   SASERVKHIKHANTMGLKVSG----EVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEV  145

Query  118  LEGHGKLLANKQVEVTGSDGKVQIVEAENVILASGSKPVDIPPAPVDQDVIVDSTGALDF  177
            + G++  L++ ++     ++  QI    ++ILA GS PV++ + P DQ  I+ ST AL++
Sbjct  146  ISGEA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQL  204

Query  178  QAVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADDQVAKEALKVLTKQGL  237
            Q VP+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+
Sbjct  205  QEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGI  264

Query  238  KIRLGARVTGSEVKKKQVTVSFTDAEGEQKLVFDKLIVAVGRRPVTTDLLAADSGVTLDE  297
             +  +A V G+E    +V V       E+ +  D  +V++GR+P T  +   + GV LD+
Sbjct  265  TVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDD  324

Query  298  RGFIFVDDQCKTSVPGVYAIGDVVRGAMLAHKASEEGIMVAERIAGHKAQMNYDLIPSVI  357
            +GFI ++++C+T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI
Sbjct  325  QGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVI  384

Query  358  YTHPEIAWVGKTEQSLKAEGVEINVGTFPFAASGRAMAANDTAGFVKVIADAKTDRVLGV  417
            +++PE+A  G TE+  K  G E   + FPF A++RA++ +D+ GFV+V+A+ +T RVLGV
Sbjct  385  FSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGV  444

Query  418  HVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            +++GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  445  QMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

425) Alide_0631 in NC_014910


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  288 bits (1078),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 201/473 (43%), Positives = 315/473 (67%), Gaps = 13/473 (2%)

Query  1    MTKEITT--KLLVIGGGPGGYVAAIRAGQLGIPTVLAEGASLGGTCLNIGCIPSKAIIHA  58
            MT E+     LLVIG+G+GGYVAAIRA+QLG   VL + A LGG CLN GCIPSKA+I A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  59   AEEFERARHQAAGSALGIRVS-DPQIDIAQTVRWKDGIVARLTGGVGTLLRKAGVQVLKG  117
            +E   R +H   ++++G++VS + Q+D+++ V+WKDGIV +LT+G+ TLL+  GV+V+ G
Sbjct  92   SE---RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  118  WAQIEDGKTATVQLQGGESVRVRCEHLLLATGSEPVELPSMPFGGP-IWSSTDALSPDVL  176
             A + ++  A +++++ E +     +L+LA GS PVEL SMPF+   I SST+AL  + +
Sbjct  149  EAYLTEAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  177  PKRLVVVGAGYIGLELGIAYRKLGVEVTVVEAAQRVLPSYDEELTEPVLQALQKQGVVLH  236
            P++LVVVG+GYIGLELG AY K+G  VT++E+++ +L++ D  LT  V + L+  G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  237  LGCSVAGWDAR---HGVHVRNARADEFALPAERVLVAVGRRPRTAGFGLESLQLDMAGR-  292
             +  V G +       VHV+    +E  +  +  LV++GR+P T+ +GLE++ + + ++ 
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEE-IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  293  HVAIDAHCRTSMRGVWAIGDVTGEPMLAHRAMAQGECVAEQIAGRNRRFEPMAIPAVCFT  352
             + I+  C+T++  V AIGD +G  +LAH+A  ++   AE I+G+N  ++  A+P V F+
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  353  DPEVVVVGRTPGEARAAGLDCIDAAFPFAANGRAMTLESTGGFVRVVARRDNHLILGWQA  412
            DPEV   G T  EA+  G + + + FPF AN+RA+++  ++GFV+VVA ++   +LG Q 
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  413  VGHGVAELAAAFGQSIEMGARLEDVGHTIHAHPTMGEAVQEAALRALGQALHI  465
            VG  V+ L A    +IE GA  ED++ TIHAHPT+ E++ EAA   +G+A H+
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

426) Alide2_0596 in NC_015422


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  288 bits (1078),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 201/473 (43%), Positives = 315/473 (67%), Gaps = 13/473 (2%)

Query  1    MTKEITT--KLLVIGGGPGGYVAAIRAGQLGIPTVLAEGASLGGTCLNIGCIPSKAIIHA  58
            MT E+     LLVIG+G+GGYVAAIRA+QLG   VL + A LGG CLN GCIPSKA+I A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  59   AEEFERARHQAAGSALGIRVS-DPQIDIAQTVRWKDGIVARLTGGVGTLLRKAGVQVLKG  117
            +E   R +H   ++++G++VS + Q+D+++ V+WKDGIV +LT+G+ TLL+  GV+V+ G
Sbjct  92   SE---RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  118  WAQIEDGKTATVQLQGGESVRVRCEHLLLATGSEPVELPSMPFGGP-IWSSTDALSPDVL  176
             A + ++  A +++++ E +     +L+LA GS PVEL SMPF+   I SST+AL  + +
Sbjct  149  EAYLTEAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  177  PKRLVVVGAGYIGLELGIAYRKLGVEVTVVEAAQRVLPSYDEELTEPVLQALQKQGVVLH  236
            P++LVVVG+GYIGLELG AY K+G  VT++E+++ +L++ D  LT  V + L+  G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  237  LGCSVAGWDAR---HGVHVRNARADEFALPAERVLVAVGRRPRTAGFGLESLQLDMAGR-  292
             +  V G +       VHV+    +E  +  +  LV++GR+P T+ +GLE++ + + ++ 
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEE-IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  293  HVAIDAHCRTSMRGVWAIGDVTGEPMLAHRAMAQGECVAEQIAGRNRRFEPMAIPAVCFT  352
             + I+  C+T++  V AIGD +G  +LAH+A  ++   AE I+G+N  ++  A+P V F+
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  353  DPEVVVVGRTPGEARAAGLDCIDAAFPFAANGRAMTLESTGGFVRVVARRDNHLILGWQA  412
            DPEV   G T  EA+  G + + + FPF AN+RA+++  ++GFV+VVA ++   +LG Q 
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  413  VGHGVAELAAAFGQSIEMGARLEDVGHTIHAHPTMGEAVQEAALRALGQALHI  465
            VG  V+ L A    +IE GA  ED++ TIHAHPT+ E++ EAA   +G+A H+
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

427) lpdA-1 in NC_009504


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  288 bits (1079),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 183/446 (42%), Positives = 304/446 (69%), Gaps = 7/446 (1%)

Query  23   RAGQLDIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGIT-TQNPA  81
            RA+QL+   VLV+K+ LGG CLN GCIPSKALI A++   R+  +   + +G+  + +  
Sbjct  57   RAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQ  113

Query  82   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  141
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  200
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  201  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  259
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  260  AIEADKILVTVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  318
             I+ D  LV++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  319  AHRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  378
            AH+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  379  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  438
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  439  TIYAHPTLGEGFAEASMKALGHALHV  464
            TI AHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

428) M446_6299 in NC_010511


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  288 bits (1080),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 199/466 (43%), Positives = 322/466 (70%), Gaps = 5/466 (1%)

Query  159  EVLVLGAGPGGYTAAFRAADLGKKVVLVERWASLGGVCLNVGCIPSKALLHAAKVIDESH  218
            ++LV+GAG+GGY AA+RAA+LGKKVVLV++ A LGGVCLN GCIPSKAL+ A+  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  219  GMAAHGISFASP-QIDIDKLRSWKEGVVKKLTGGLQGLAKQRKVTVVTGTGRFVSPHQIA  277
               + G+  ++  Q+D+  +  WK+G+V+KLT+G++ L K   V V++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  278  VEHEGQTRIIGFDQAIIAAGSEPIQMPFIPHDDPRVIDSTGALELGGIPQRLLVigggii  337
            +  E++ +I+++ + I+A GS P+++  +P D+ R+I ST AL+L  +P++L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  338  gLEMATVYHALGAKVTIVELMDQIIPGADKDIVTPLMKRISKQYE-AIHLKAKVTAVEAR  396
            GLE++T Y  +GAKVTI+E  D I++G+D  I+T  +KR  K+   ++   A V + E  
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTD-PILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  397  PEGLKVTFEGGSAPATDTFDKILVSVGRRPNGKLIGAEAAGVIVDERGFIPVDKQMRTNV  456
             + ++V  + ++       D  LVS+GR+PN   IG E  GV++D++GFI ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  457  PHIFAIGDVVGQPMLAHKATHEGKVAAETAAGKNSFFDAKVIPSVAYTDPEVAWVGLTEN  516
             H++AIGD  G  +LAHKA+ E+K+AAE  +G+NS +D + +P V ++DPEVA  GLTE+
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  517  EAKAKGIKVGKGSFPWAASGRSLSLGRDEGLTKVLFDEATDRIVGCGIVGPSAGDLIAEA  576
            EAK KG     + FP  A++R+LS++  +G+ +V+ +  T R++G  +VGP  + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  577  ALAIEMGADASDIGLTIHPHPTLSETVGMAAEAFEGTITDLYMPKR  622
             +AIE GA+A D++LTIH+HPTL+E +  AAE+  G  T++ + K+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKK  503

429) Hbor_39890 in NC_014736


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  288 bits (1077),  Expect = 7e-79, Method: Compositional matrix adjust.
 Identities = 195/467 (42%), Positives = 319/467 (69%), Gaps = 8/467 (1%)

Query  11   DVLVIGAGPGGYVAAIRAAQHGLDVTLVEKEAYGGVCLNHGCIPSKAYISATDLAHDAGQ  70
            D+LVIGAG+GGYVAAIRAAQ G  V LV+K   GGVCLN+GCIPSKA ISA++   +  +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  71   AAEMGILV--DPAIDMAKMQEWKSNSISRLTDTVEKLCKANGVSLIEGMASFVDETEVHV  128
            A  MG+ V  +  +DM+ +  WK   +++LTD +  L K+NGV +I G  +++  TE H+
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYL--TEAHI  157

Query  129  TRDEDNRDRVSIGFERCIISTGSRPVQIPGFDFTDDEVWSSRDALSAATVPDRLVVVGAG  188
            ++   + +   +++   I++ GS PV++ +  F +  + SS +AL    VP++LVVVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  189  YIGMELSTVFAKLGSDVTVIEMLDDALPGYEDDITRVVRKRASELGIDFRFGEGASEWRG  248
            YIG+EL+T +AK+G+ VT++E  D  L+G +  +T+ V+++  E+GI   + ++  +  G
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQ-GG  275

Query  249  IDNGIEVVTETE-DGERSVYPTDKVLVAVGRQPVTETLDLEQIGLEPTEQGFLETDRHAR  307
             + G EV  + + DG   +   D  LV++GR+P T  ++LE+IG+   +QGF+  +   +
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  308  TDVEHVFAVGDVAGEPMLAHTASKEGIVAADVAAGKPSTMDNRTIPAAVFTDPEIGTVGL  367
            T++EHV+A+GD AG  +LAH AS E+ +AA+V +G+ S +D +++P  +F+DPE++  GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  368  TAAEAESEGFDPIVGTFPFRASSRALTTGETEGFVRIVADGECGTVLGAQIvgaeaselv  427
            T  EA   G++ + + FPF+A++RAL+ ++++GFV++VA+ +   VLG Q+VG+E S L+
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  428  aevalaieldaTVEELASTVHTHPTLAEAVMEAAENARDRAIHTLNR  474
            AE  +AIE +A  E+L+ T+H+HPTL+E++MEAAE   ++A H LN+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

430) Neut_2103 in NC_008344


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  288 bits (1079),  Expect = 7e-79, Method: Compositional matrix adjust.
 Identities = 182/447 (41%), Positives = 308/447 (69%), Gaps = 3/447 (0%)

Query  127  EVVVLGAGPGGYTAAFRAADLGKQVVLIERYSTLGGVCLNVGCIPSKALLHAAKTLTEAK  186
            +++V+GAG+GGY AA+RAA+LGK+VVL+++ + LGGVCLN GCIPSKAL+ A+  + + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  187  EADQYGIHF-GRPEIDIGKLCSWKESVVGKLTKGLSMLAKQRKVTVIHGAGKFANSHLIE  245
            +A+  G+   G  ++D+  +  WK+++V KLT G+  L K   V VI G + ++++H+  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  246  VETSDGIETVSFEHCIIAAGSSAARIPILP-DNECIIDSTGALALTEIPPRMLIVGGGVI  304
            +   D  +  S+ + I+A GS +  +  +P D+  II ST AL L E+P ++++VGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  305  GLEMATVYHALGSKISIVEQMVQLIPGADADLVKPLHKRLKAGCEAIYLNTSVSRIEVDG  364
            GLE++T Y  +G+K++I+E    +++G+D+ L K + ++LK    ++  ++ V   E  G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  365  KEVQVFFEGEQAPEPQRYDRVLVAVGRRPNGKLINAEAAGVSVDEHGFITVDKQMRTNIA  424
             EV+V  + +   E  + D  LV++GR+PN   I  E  GV +D++GFI ++++ +TNI 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  425  HIFAIGDIVGDPMLAHKASHEGKIAAEVIAGHKVAFDARTIPSVAYTDPEVAWMGLTETE  484
            H++AIGD  G+ +LAHKAS E+KIAAEVI+G++  +D +++P V ++DPEVA  GLTE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  485  AEKQGIAYEKAVFPWAASGRAITLARDEGMTKLLFDKTTRRILGAGIVGAHAGELISETV  544
            A  +G     + FP  A++RA++++  +G  +++ +K T+R+LG  +VG++ + LI+E+V
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  545  LALEMGADMQDIGLTIHPHPTLSETVL  571
            +A+E GA+ +D++LTIH+HPTL+E ++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLM  486

431) Sfum_3549 in NC_008554


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  287 bits (1075),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 192/465 (42%), Positives = 315/465 (68%), Gaps = 14/465 (3%)

Query  1    MAGD-GKY-DVIVIGSGPGGYVACLRAAELGLRAACVEKSDRVGGACLNVGCIPSKALLE  58
            M+G+  KY D++VIG+G+GGYVA +RAA+LG +   V+K++ +GG CLN GCIPSKAL+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALIS  90

Query  59   SSRYYTLARKRFQEHGIVLDDQV-----LDLPVMMARKSEVVRGLVENVRKLLENAGVAL  113
            +S      R +   H+  ++ +V     +D+P ++ +K  +V  L + +R LL   GV +
Sbjct  91   AS-----ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEV  145

Query  114  IRGTARLAGEHRVEVTRDGEKTMLEADAVVLATGGEPVPVPSLPFDGCRIVSSTEALDFD  173
            I G A L+  H   +  ++E  ++    ++LA G+ PV + S+PFD  RI+SSTEAL+++
Sbjct  146  ISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQ  205

Query  174  RVPEHLAVVGGGTIGLELGSVWSRLGARVTVIEMMPGIAAVADGQVSRTLERLLGRQGLE  233
             VP+HL VVGGG IGLELG+  +++GA+VT++E    I + +D  +++T+ R L   G+ 
Sbjct  206  EVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT  265

Query  234  FRLRTKVTGAEVTDEQVVLTLDADGKEDRIACDRVLVAVGRKPFTGGLGLEALGIGTDPR  293
                + V G+E T+++V + ++ DGKE+ I CD  LV++GRKP TG +GLE +G+  D +
Sbjct  266  VITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  294  TGHVLVDERYRTGVASIYAVGDLVPGPMLAHKASAEGIAAVECIAGLPGEVNYDTIPSVI  353
             G + ++++ +T +  +YA+GD   G +LAHKAS E+  A E I+G  + ++++++P VI
Sbjct  326  -GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVI  384

Query  354  YTSPEVAGVGLTEEQARERGLSFVAGSCPFTGSARARCIGDTDGFVKVIAHGRTGRLLGV  413
            ++ PEVA  GLTE +A+E+G   V++  PF ++ARA  ++D+DGFV+V+A+  T R+LGV
Sbjct  385  FSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGV  444

Query  414  HIIGPEASELIGECAGALERNATAEEFARVVRAHPTLSEAVRDAA  458
            +++GPE S LI+E   A+E  A AE+++  ++AHPTL+E++ +AA
Sbjct  445  QMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

432) lpd in NC_014532


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  287 bits (1074),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 195/477 (41%), Positives = 326/477 (69%), Gaps = 13/477 (2%)

Query  4    KF-DVIVIGAGPGGYVAAIRAAQLGLKTACVEKWVNKEGKTVHGGTCLNVGCIPSKALLE  62
            K+ D++VIGAG+GGYVAAIRAAQLG K   V+K       +  GG CLN GCIPSKAL+ 
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALIS  90

Query  63   SSHKFVEARDHFEEIGIDMEAPTP-NIAKMLEFKEKVIAKNVGGISALFKANGVTAIDGT  121
            +S++ V    H + +G+ + +    +++ ++  K+ ++ K  +GI +L+K+NGV  I G 
Sbjct  91   ASER-VKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKVTGSKEVEVTDHDGKSTTYEADNIVVAAGSVPVEIPPTPLTDDLIVDSAGALEFQEAP  181
            + +T +    +  +D     +   ++++A GS+PVE+ + P+ +  I+ S+ AL++QE P
Sbjct  150  AYLTEAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWSRLGSEVTILEAMDDFLPMVDKTIAKDAQKLFKKQGLDIKL  241
            ++L V+G+G IGLELG+  +++G+ VTILE+ D +L+  D  ++K  ++ +K  G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGSEVKDNEVVVKYTDAKGEQEITFDKL-IVCVGRRPYTKGVIGEGVGVELDERGF  300
            +A V G+E  ++EV V   +  G +EI      +V +GR+P T  +  E +GV LD++GF
Sbjct  269  DALVQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  ISVDDQCRTNVPSVYAIGDCVRGLMLAHKASEEGVMVADIIAGHKAEMNYDAIPSVIYTA  360
            I ++++C+TN+  VYAIGDC  G +LAHKAS E+ + A++I+G+++ ++++A+P VI++ 
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEVAWVGMTEEEAKSAGIKVETGSFPFSANGRALANNAPDGQVKIVADAETDRILGVHIL  420
            PEVA  G+TE EAK  G    ++ FPF AN+RAL+ + +DG V++VA+ +T R+LGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GQHAGELIAQGVIAMEFGSSAEDLALTCYAHPSTSEAVHEAALAVGGHAIHMANRKK  477
            G + + LIA++V+A+E G++AEDL+LT  AHP+ +E++ EAA +V GHA HM N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

433) Desca_0393 in NC_015565


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  287 bits (1075),  Expect = 9e-79, Method: Compositional matrix adjust.
 Identities = 188/457 (42%), Positives = 315/457 (69%), Gaps = 6/457 (1%)

Query  6    VVIGGGPGGYVAAIRIAQLGGRVAVVEKDKLGGTCLNRGCIPTKSLIAAVDKLKAVEEAA  65
            +VIG+G+GGYVAAIR AQLG +V +V+K  LGG CLNRGCIP+K+LI+A +++K + +A 
Sbjct  43   LVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN  102

Query  66   EFGIEVSKPV-INFGKVQARKAEVVEKLVSGINFLFKKNRVDLFTGTAKIKAPGVVEVEH  124
              G+ VS  V ++   V  +K  +V+KL  GI  L+K N V++++G A +  + +  +  
Sbjct  103  TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI  162

Query  125  NGEVQELPCENIVIATGSSPALIKSLGYNGTTVITSEEALQLTEVPKSLLIIGAGVIGCE  184
            ++E Q ++  ++++A GS P  +KS+ ++   +I+S EALQL EVP+ L+++G+G IG E
Sbjct  163  EDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLE  222

Query  185  FAHIYGSMGTEITMVEAAASILS----IQDKDISRRMQtifkkkkfniktnatikkiEEV  240
            ++  Y+  G+ +T++E++ +ILS    I  K + R+++ I      +   ++  +  +EV
Sbjct  223  LGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEV  282

Query  241  DGGVKAELENGDIITAEKALISIGRTLNTQNLGLAEVGVELGDRGQILVNDQMQTNIKGI  300
            +  V+ +  + +II  +  L+SIGR  NT ++GL ++GV L+D+G I +N++ QTNI  +
Sbjct  283  NVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHV  341

Query  301  YAIGDVVMKYQLAHVASAQGIVAAENIMGKNSTMDYSAVPSCIFTSPEIASVGMTEQQAK  360
            YAIGD      LAH AS ++ +AAE I G+NS +D+ A+P  IF+ PE+A  G+TE++AK
Sbjct  342  YAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAK  401

Query  361  DKGIPVKTGKFNFMANGKALSMGEGEGFVKIITNQENDVVLGVHIIGPHASDLIAEATLA  420
            +KG    +++F F AN++ALS+++++GFV+++++++   VLGV+++GP+ S LIAEA +A
Sbjct  402  EKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFA  461

Query  421  VRKGMSAKELATTIHAHPTLAEAIMEAAENVHGLSIH  457
            +  G +A +L+ TIHAHPTL+E++MEAAE V G + H
Sbjct  462  IEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

434) pdhD in NC_016112


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  286 bits (1070),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 196/475 (42%), Positives = 332/475 (70%), Gaps = 5/475 (1%)

Query  7    ANESNLHAEVLVLGGGPGGYTAAFRAADLGKQVVIVERYPVLGGVCLNVGCIPSKALLHM  66
            + E +   ++LV+G+G+GGY AA+RAA+LGK+VV+V++ + LGGVCLN GCIPSKAL+  
Sbjct  33   TGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISA  91

Query  67   AQIVHEAQEFSGHGVDF-GAPKFDLDKIRSWKDSVTKGLNNGLDGLVKQRKITRIQGNGS  125
            ++ V + ++ +  G+   G  + D+  +  WKD++ + L +G+  L+K   +  I G+ +
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE-A  150

Query  126  FVSENQL-QVDNENGTQLISFDQAIIAAGSEPTKIPAFPNDDPRLWDSTGALQLREIPEK  184
            +++E ++ ++  E+  Q++S+ + I+A GS P  + + P D+ R+  ST ALQL+E+P+ 
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  185  llivgggiiglEMATVYHALGSKISVVELMDQIIPGCDKDLVRPLHNRIKKQYEAIWTET  244
            L++VGGG IGLE++T Y  +G+K++++E  D I++G D  L + +  ++K    ++ T++
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  245  RVTAIEALEEGLKVSFEGDKAPESEIFDAVLVAVGRRPNGKKLGAENAGIQVTEQGFIEV  304
             V + E   + ++V  + D   E    D  LV++GR+PN  K+G EN G+ + +QGFI +
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  305  DKQQRTNIPHIYAIGDIVGNPMLAHKAAYEGKIAAEVIAGHKAAFDALTIPSVAYTDPEI  364
            +++ +TNI H+YAIGD  G  +LAHKA+YE+KIAAEVI+G+++ +D  ++P V ++DPE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  365  AWMGLTENQAKEQGIEIDKGVFPWAASGRSLSMGRSEGMTKVICDKETGRILGAGIVGPH  424
            A  GLTE++AKE+G E   + FP  A++R+LS++ ++G  +V+ +K+T R+LG  +VGP+
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  425  AGDLIAEAVLALEMGADAEDVALTIHPHPTLSETFAFASEVVAGTITDLYLGKKR  479
             + LIAEAV+A+E GA+AED++LTIH+HPTL+E +  A+E V G  T++ L KK+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

435) DR_2370 in NC_001263


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 193/465 (42%), Positives = 330/465 (71%), Gaps = 8/465 (1%)

Query  8    DVLVIGAGPGGYHAAIRASQLGLKTACVERGAVGGVCLNIGCIPTKALLHAAETMQASKH  67
            D+LVIGAG+GGY AAIRA+QLG K   V+++ +GGVCLN GCIP+KAL+ A+E ++  KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  68   AAEFGLTFSGQA-LDIARLNGWKDSIVKKLTGGVSGLFKANKVTLLTGQASFVDDHTVQV  126
            A   GL  SG+  +D++ +  WKD+IV+KLT+G+  L+K+N V +++G+A + + H  ++
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  127  ----GDKTYTAANIIIATGSDPAKLPGLEVDQQQIVDSTGALVMPDPVPARMLCVGGGVI  182
                 ++ ++  ++I+A GS P  L ++  DQ++I+ ST AL + + VP +++ VGGG I
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGYI  219

Query  183  GFEFAQVYNNLGSQVKIIEFLPSVIPGADADAVKEFSKIMSRQGIEIVTQMKANRAEKKS  242
            G+E++  Y ++G++V I+E   ++++G+D+   K   + +   GI ++T+   + +E+ +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  DGVHVELENVKTGEKTTEVFDRVLVAVGRRPRTDGLNPEQAGVTVTERGFIPADKQQRTN  302
            D V+V+++ V   E   +  D  LV++GR+P T+ +  E+ GV + ++GFI  +++ +TN
Sbjct  280  DEVNVHVQ-VDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  303  VPHIFSIGDVAGNPMLAHKAMKEGLVAAEVIAGKPAEQDAVAIPGVVYTNPELAWVGLTE  362
            + H+++IGD AG  +LAHKA  E+ +AAEVI+G+ +  D  A+P V++++PE+A  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  363  AEAQEKGYEVKTGVFPMSASGRAMTLQATEGFVKMVVEKDTDLLLGVHIVAPHASDmlae  422
             EA+EKGYE  ++ FP  A++RA+++  ++GFV++V EK+T  +LGV++V+P+ S ++AE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  423  aglalemaatatDISLTIHAHPTLGESILEAAEASHKQAIHIVNR  467
            A +A+E +A A D+SLTIHAHPTL E+++EAAE+   +A H++N+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

436) Dred_0365 in NC_009253


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 184/458 (41%), Positives = 322/458 (71%), Gaps = 4/458 (0%)

Query  4    DAVVIGGGPGGYVAAIRIAQKGGKVAVIEKDQLGGTCLNRGCIPTKALIASVDKLKAVEE  63
            D +VIG+G+GGYVAAIR AQ G KV +++K +LGG CLNRGCIP+KALI++ +++K + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  64   ASEFGIEVGKPV-IDFRKVQARKAEIVDKLVSGIKYLFDKNKIDHLNGTGKIKTANIVEV  122
            A+  G+ V+  V +D   V  +K  IV+KL  GI+ L+  N ++ ++G + +  A+I  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  123  NNADKTYELQCKNIIVATGSSPSLIQSLGYNGTTIITSEEALKLTEVPKSLLIIGAGVIG  182
            +  D    +  K++I+A GS P  ++S+ ++   II+S EAL+L EVP+ L+++G+G IG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  183  CEFAHIFGSMGTQITMVEAAPSILSIQDKDISRRMQTVFKKKKFNIKTNVAITKMEQTGA  242
             E++  ++  G+++T++E++ +ILS  D  +++ ++  +K   + + T+  +   E+TG 
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  243  GIQAELE---NGDIIKAEKALISIGRQLNTKNLGLEDIGVQLGEKGQILVNDRLETNIKG  299
             ++ +++   + +II+ +  L+SIGR+ NT ++GLE+IGV L+++G I +N++ +TNI  
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  300  IYAVGDVISKYQLAHVASAQGIVAAENIMGKESTMDYNAVPSCIFTSPEISSVGITEQQA  359
            +YA+GD  +   LAH AS ++ +AAE I G++S +D++A+P  IF+ PE++  G+TE++A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  360  KDRKIPVKTGKFNFMANGKALSMGEGEGFVKIVAHKETDVVLGVHIIGPHASDLIAEATL  419
            K++     +++F F AN++ALS+++++GFV++VA+K+T  VLGV+++GP+ S LIAEA +
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVF  460

Query  420  AVRKGLTTKELAVTIHAHPTLAEVIMEAAENVHGLNIH  457
            A+  G  + +L++TIHAHPTL+E +MEAAE V G   H
Sbjct  461  AIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

437) H681_13955 in NC_020829


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 194/477 (41%), Positives = 326/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFAVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A ++ G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKVLANKQVEVTGLDGKTQVLEADNIIIASGSKPVEIPPAPLTDDIIVDSTGALEFQSV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTGTEIKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V G E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IFVDDHCKTSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPAVIYTH  360
            I +++ C+T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQQLKGEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE++ K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

438) llh_0195 in NC_017492


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 209/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

439) kw2_0046 in NC_022369


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 209/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

440) pdhD in NC_019435


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 209/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

441) pdhD in NC_017486


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 209/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

442) pdhD in NC_002662


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 209/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

443) pdhD in NC_020450


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 209/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

444) pdhD in NC_013656


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 209/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

445) Slin_6035 in NC_013730


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1066),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 194/452 (43%), Positives = 319/452 (71%), Gaps = 5/452 (1%)

Query  4    DVIVIGSGPGGYTGAIRCAQLGLKTAIIEKYPSLGGTCLNVGCIPSKALLDSSEHYYNAA  63
            D++VIG+G+GGY +AIR AQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HTFAEHGIKLA-DLQVDLAQMITRKASVVEQTTKGIAFLMKKNKIDELHGVGSFVDPHTI  122
            H+    G+K++ ++QVD+++++ +K ++V++ T GI  L+K N ++ + G + + ++H  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  KITKDDGSEQIIKGKNIVIATGSKPMSFPSMPIDKKRVITSTEALTLQEIPKHMIVIGAG  182
            KI K ++ EQI+  K++++A GS P+ + SMP+D+KR+I+STEAL LQE+P+H++V+G+G
Sbjct  159  KI-KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGAELGSVYARIGSKVSFVEFADSMIPTMDKTMGKELQKSIKKLGADFYFSHKVTKVEN  242
             IG ELG+ YA++G+KV+++E +D++++  D  + K +++ +K +G        V   EN
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  243  TGEEVIVNVDTPKGEQITLTGDYCLVSVGRRPYTDGLNLEAAGLKTDDRGKLEVDNHLRT  302
            TG+EV V+V+    E+I +  DYCLVS+GR+P T+ + LE  G+  DD+G + ++N  +T
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  303  SVPHIYALGDVIRGAMLAHKAEEEGTFIAETIVGQKPHIHYRLIPGVVYTWPEVASVGYT  362
            ++ H+YA+GD   G +LAHKA  E+ + AE I GQ++ I+++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  EEEVKKEGIPYKVGSFPFKALGRARASMDVDGLVKVLAHKETDEILGVHMIGARAADMIA  422
            E E K  G     + FPF+A +RA +  D DG+V+V+A+K+T  +LGV+M+G+  + +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  EAVVAMEFRASAEDVSRMSHAHPTYTEAFKEA  454
            EAV A+E  A+AED+S   HAHPT  E++ EA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

446) Mfla_2076 in NC_007947


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 191/459 (42%), Positives = 317/459 (70%), Gaps = 10/459 (2%)

Query  114  TGDSDINTEVVVLGSGPGGYTAAFRAADLGKQVVLIERYSTLGGVCLNVGCIPSKALLHT  173
            TG+     +++V+G+G+GGY AA+RAA+LGK+VVL+++ + LGGVCLN GCIPSKAL+ +
Sbjct  33   TGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISA  91

Query  174  AKVITEAEETSLHGVSF-GKPKIDLEALRAWKANDVVGKLTAGLAQMAKQRGVTVVQGVG  232
            +  + +  +++  G+   G  ++D+  +  WK +++V KLT G+  + K  GV V+ G +
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  233  KFTSPHQIAVTAADGKVTTVGFQNAIIAAGSQATKFPGAP-EDERIMDSTGALALADVPK  291
             + +  +IA    ++     ++++ I+A GS +  + + P ++ RI+ ST AL L +VP+
Sbjct  151  -YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  292  RLLVigggiigLEMGTVYEALGSKVSVVEFMDGLIPGADRDLIRPLQKRMEKRFERIMLS  351
            +L+V+GGG IGLE+GT Y  +G+KV+++E  D +++G+D  L + +++++      ++  
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  352  TKVANIEAKKDGIHVSFEGENAPKEIEVYDRVLVSIGRRPNGKNIGAENAGVAVDDRGFI  411
            + V   E   D ++V  + + +  EI   D  LVSIGR+PN  +IG EN GV +DD+GFI
Sbjct  270  ALVQGGENTGDEVNVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  412  TVDKQMRTNVPHIFAIGDIVGQPMLAHKATHEAKVAAEVIAGHK--VEFQAMVIPSVAYT  469
             ++++ +TN+ H++AIGD  G  +LAHKA+ EAK+AAEVI+G++  ++FQAM  P V ++
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAM--PFVIFS  386

Query  470  DPEVAWAGVTETEAKAKGLEIEKASFPWAASGRALSIARSEGATKLIFDKETHRVIGAGI  529
            DPEVA +G+TE EAK KG E   + FP  A++RALS++ ++G  +++ +K+T RV+G  +
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  530  VGTNAGELLAEAVLAIEMGADAHDLGLTIHAHPTLSETI  568
            VG + + L+AEAV+AIE GA+A+DL+LTIHAHPTL+E +
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

447) PT7_0839 in NC_015458


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1066),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 192/460 (42%), Positives = 307/460 (67%), Gaps = 16/460 (3%)

Query  16   YVAAIRAAQLGVQTTLIEAGNVGGTCLNIGCIPSKALIHAAEEFHKLTHYAGDSALGLSV  75
            YVAAIRAAQLG +  L++ +++GG CLN GCIPSKALI A+E   ++ H    +++GL V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKV  108

Query  76   QSP-SLDVKQTVAWKDGIVARLTGGVGALLKKNGVQVVNGWARIIDGKTVEVETLGKAGK  134
             +   +D+ + V WKDGIV +LT+G+ +LLK NGV+V++G A + ++    +        
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKI------  162

Query  135  AVGTDKPQRFSCEHLLLATGSEPVELPFMPFGG-PVISSTQALSPASLPGKMAVVGAGYI  193
                D  Q FS  +L+LA GS PVEL  MPF+   +ISST+AL    +P  + VVG+GYI
Sbjct  163  ---EDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  194  GLELGMAYAKLGVEVSIVEAQDRILPAYDAELVKPVQAALKKLGVVLHLSRRVLGLTDAG  253
            GLELG AYAK+G  V+I+E+ D IL++ D+ L K V+  LK +G+ +     V G  ++G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  254  NGLRIASE-QDDETVMPVDQVLVAVGRRPRTAGYGLESLLLDMNGAAL-RIDDQCRTSMR  311
            + + +  + ++ E ++  D  LV++GR+P T+  GLE++ + +++ ++ +I+++C+T++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  312  NVWAIGDVAGEPMLAHRAMAQGELAAELIAGQHRRFNPASIPAVCFTDPEIVVAGLAPDD  371
            +V AIGD AG  +LAH+A  ++ +AAE+I+GQ+  ++  ++P V F+DPE+  +GL+  +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  372  AKRQGLDVVSAAFPFAANGRAMTLESTDGFVRVVARRDNHLIVGWQAVGQGVSELSAAFS  431
            AK +G + VS+ FPF AN+RA+++  +DGFV+VVA ++   ++G Q VG  VS L A   
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  432  QSLEMNARLEDVAGTIHAHPSLGEAVQEAAMRALGHALHI  471
             ++E  A  ED++ TIHAHP+L E++ EAA   +GHA H+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

448) Hbor_02940 in NC_014729


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1067),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 195/479 (41%), Positives = 327/479 (69%), Gaps = 13/479 (2%)

Query  2    VVGDISTGTEVLVIGAGPGGYVAAIRAAQNGLDTTLVEKDAYGGTCLNHGCIPSKAFITA  61
            + G++    ++LVIGAG+GGYVAAIRAAQ G    LV+K   GG CLN+GCIPSKA+I+A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   SSLAHEAGHAEEMGIH--ANPAVDMSQLRNWKDGVVDQLTGGVEKLCKANGVNLIEGTAR  119
            S    +  HA+ MG+   ++  VDM+++ +WKDG+V++LT+G+  L K+NGV++I G A 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  120  FKDDGAVRIEHGGEGQGSETVEFEHCIIATGSRPIQVPGFEFADDAVWSSRDALAADSVP  179
            + +    +I   +E Q      + + I+A GS P+++ +  F +  + SS +AL  + VP
Sbjct  152  LTEAHIAKIKIEDEEQ---IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  180  DDLVVVGAGYIGMELSTTFAKLGANVTVVEMLDDVLPGYEDDVARVVRKHAESLGVKF--  237
            ++LVVVG+GYIG+EL+T++AK+GA+VT++E  D +L+G +  +++ V++H   +G+    
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  238  -HFGEGASGWSPdgedvvvetetedgeISTYRADKVLVAVGRSPVTDTLDIENAGLEPNE  296
              + +G+   + + +  V     E+     Y     LV++GR P T+ +++EN G+  ++
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDY----CLVSIGRKPNTGKIGLENIGVVLDD  324

Query  297  NGFLETDDRMRTDVEHIYAIGDVVADSPMLAHVGSKEGIVAAEHIADEPVAYDAQAVPAA  356
            +GF+  +++ +T++EH+YAIGD  A++ +LAH +S E+ +AAE I+++    D QA+P  
Sbjct  325  QGFIKINNKCQTNIEHVYAIGDC-AGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFV  383

Query  357  VFTEPEIGTVGMTQAEAEEAGFTPVVGKMPFNASGRALTTGHTDGFVRIVADEDSGFILG  416
            +F++PE++  G+T+ EA E G+  V ++ PF+A++RAL+ +++DGFV++VA+ ++  +LG
Sbjct  384  IFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLG  443

Query  417  AQIVGPeaselvaelalaieMGATLEDVAGTIHTHPTLAEAVMEAAENAQGQAIHTLNR  475
             Q+VGPE S L+AE  +AIE GA  ED++ TIH+HPTL+E++MEAAE   G+A H LN+
Sbjct  444  VQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

449) lpdA2 in NC_019670


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1066),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 324/477 (68%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDKEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG     ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKFHEAQDGFAIHGINHAG-VTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSIQG  120
             +S +  + +++ ++ G++ +G V +D+P +V +K  IV+ LT G+ TL+K+NGV  I G
Sbjct  90   SASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLAGKKVEVTKPDGSVEIIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQSV  180
            ++  L+   +   K ++  +I+   ++ILA GS P+++ + P DQ+ I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKRLGVIGAGVIGLELGSVWSRLGAEVTVLEALDTFLMAADTAVSKEALKTLTKQGLDIK  240
            P++L V+G+G IGLELG+  +++GA VT+LE+ DT+L ++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTGSKVNGDEVVVNYTDANGEQNITFDKLIVAVGRRPVTTDLLAADCGVTLDERGF  300
             +A V G+   GDEV V+      E+ I  D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  VHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH  360
            + +++ C T +  VYAIGD   G +LAHKAS E+ +  E I G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQALKAEGVDVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G +   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

450) pdhD in NC_009004


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1065),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 208/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNNTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++++ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

451) LLNZ_00350 in NC_017949


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1065),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 208/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL+VIG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNNTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++++ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

452) LACR_0048 in NC_008527


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1065),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 208/466 (45%), Positives = 331/466 (72%), Gaps = 9/466 (1%)

Query  10   VDLVIIGSGPGGYVAAIRAAELGKKVTIIEKDNVGGVCLNIGCIPSKALINIGHHYQESL  69
            VDL++IG+G+GGYVAAIRAA+LGKKV +++K ++GGVCLN GCIPSKALI+ +    E +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERV  95

Query  70   EEEKGENPFGLSV-GNVKLNWESAQKWKQDKVVNQLTGGVKMLLKKHKVDVIQGTAEFID  128
             + K  N  GL V G+V+++     KWK++ +VN+LT+G++ LLK + V+VI G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NNTINVEQEDGFQLLQFNDVIISTGSRPIEIPSFPFGG-RIIDSTGALSLPEVPKHliiv  187
             +  ++  ED  Q++ ++D+I++ GS P+E+ S PF+  RII ST AL L EVP+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKSAGSEIFTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  ++T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDKDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDLIGLNNTDVKLTDRGLIEVDDSY  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ IGL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  ATNVPHIYAIGDVVPGPMLahkasfqakvaaaaiagaEDDVDLHVALPAVAYTTTELATV  367
             TN+ H+YAIGD   G +LAHKAS++AK+AA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRK-DVKISKFPFAANGRAISMNDTTGFLRLITETKEGALIGAQIVGPGASD  426
            G T    K++  +   S+FPF AN+RA+S++D+ GF+++++E +   ++G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  427  LISGLSLAIENGLTSKDISLTIQPHPTLGEAIMDTAELADGLPIHV  472
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

453) lpdG in NC_021237


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1065),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGFTTACIEKYTDKEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG     ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKFHEAQDGFAIHGINHAG-VTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSIQG  120
             +S +  + +++ ++ G++ +G V +D+P +V +K  IV+ LT G+ TL+K+NGV  I G
Sbjct  90   SASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLAGKKVEVTKPDGSVEVIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQSV  180
            ++  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKRLGVIGAGVIGLELGSVWSRLGAQVTVLEALDTFLMAADTAVSKEALKTLTKQGLDIK  240
            P++L V+G+G IGLELG+  +++GA+VT+LE+ DT+L ++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTGSKVNGEEVVVTYTDANGEQTITFDKLIVAVGRRPVTTDLLAADCGVTLDERGF  300
             +A V G+   G+EV V       E+ I  D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  VHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVAERIKGHKAQMNYDLIPSVIYTH  360
            + +++ C T +  VYAIGD   G +LAHKAS E+ + AE I G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGTAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

454) lpdA_1 in NC_004129


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  285 bits (1065),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGFTTACIEKYTDKEGKLALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG     ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKFHEAQDGFAIHGINHAG-VTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSIQG  120
             +S +  + +++ ++ G++ +G V +D+P +V +K  IV+ LT G+ TL+K+NGV  I G
Sbjct  90   SASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLAGKKVEVTKPDGSVEVIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQSV  180
            ++  L+   +   K ++  +++   ++ILA GS P+++ + P DQ+ I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKRLGVIGAGVIGLELGSVWSRLGAQVTVLEALDTFLMAADTAVSKEALKTLTKQGLDIK  240
            P++L V+G+G IGLELG+  +++GA+VT+LE+ DT+L ++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTGSKVNGEEVVVTYTDANGEQTITFDKLIVAVGRRPVTTDLLAADCGVTLDERGF  300
             +A V G+   G+EV V       E+ I  D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  VHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVAERIKGHKAQMNYDLIPSVIYTH  360
            + +++ C T +  VYAIGD   G +LAHKAS E+ + AE I G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D++GFV+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGTAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

455) K649_10915 in NC_021081


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  284 bits (1062),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 198/466 (43%), Positives = 316/466 (68%), Gaps = 11/466 (2%)

Query  6    DVIVIGTGPGGYHAAIRAAQLGKKVLAVEAEHVGGVCLNVGCIPTKALLHAAEELEGTKH  65
            D++VIG+G+GGY AAIRAAQLGKKV+ V+  ++GGVCLN GCIP+KAL+ A+E +   KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ASAFGLEVK-EARLDLKKLGGWRDGIVKKLTGGVSQLLKGNKVDLKTGFARF-----VDK  119
            A++ GL V  E ++D+  +  W+DGIV+KLT+G+  LLKGN V++ +G   +     + K
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAK  159

Query  120  NTIEVGGERIQGKTFIVATGSEPNTLPGFEVDQKDIVDSTGALRVEDKFPKRMLCIGGGA  179
              IE   + +  K +I+A GS P  L +   DQK I+ ST AL++++  P++++ +GGG 
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGY  218

Query  180  IGLEFAQVYKRMGAEVTVIEFMGQILPAADPETAGLLAKILGKQGIHIKTHTKGVKVERK  239
            IGLE++  Y + GA VT++E  + IL+++DP  +  + + L   GI + T++     E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  KDGLHVTLEHTQTGQQETLVVDKILVATGRRPRGKGLGLEAIGVVVDERGYIPTNEKMET  299
             D ++V ++    G++E +  D  LV+ GR+P    +GLE IGVV+D++G+I  N+K +T
Sbjct  279  GDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NVPGIYAIGDVTRPPLLAHKAMKEGLIAAENAAGGNAVMDYQ-IPNVVYTSPEWAAVGLT  358
            N+  +YAIGD +   LLAHKA  E+ IAAE  +G N+V+D+Q +P V+++ PE A  GLT
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  359  EEEATKAGYKVKVGKFPLSASGRAMTLEATDGLIKLIGDAETDLLLGGHIVGPNASDMIA  418
            E EA   GY    ++FP+ A++RA+++  +DG+++++++ +T  +LG ++VGP+ S +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  419  EIALALEMGATVTDVGLTVHAHPTLSEGIMEAAEHLHRQAIHIANR  464
            E  +A+E GA   D++LT+HAHPTL+E +MEAAE +  +A H+ N+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

456) Mrub_2323 in NC_013946


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  284 bits (1062),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 198/466 (43%), Positives = 316/466 (68%), Gaps = 11/466 (2%)

Query  6    DVIVIGTGPGGYHAAIRAAQLGKKVLAVEAEHVGGVCLNVGCIPTKALLHAAEELEGTKH  65
            D++VIG+G+GGY AAIRAAQLGKKV+ V+  ++GGVCLN GCIP+KAL+ A+E +   KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ASAFGLEVK-EARLDLKKLGGWRDGIVKKLTGGVSQLLKGNKVDLKTGFARF-----VDK  119
            A++ GL V  E ++D+  +  W+DGIV+KLT+G+  LLKGN V++ +G   +     + K
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAK  159

Query  120  NTIEVGGERIQGKTFIVATGSEPNTLPGFEVDQKDIVDSTGALRVEDKFPKRMLCIGGGA  179
              IE   + +  K +I+A GS P  L +   DQK I+ ST AL++++  P++++ +GGG 
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGY  218

Query  180  IGLEFAQVYKRMGAEVTVIEFMGQILPAADPETAGLLAKILGKQGIHIKTHTKGVKVERK  239
            IGLE++  Y + GA VT++E  + IL+++DP  +  + + L   GI + T++     E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  KDGLHVTLEHTQTGQQETLVVDKILVATGRRPRGKGLGLEAIGVVVDERGYIPTNEKMET  299
             D ++V ++    G++E +  D  LV+ GR+P    +GLE IGVV+D++G+I  N+K +T
Sbjct  279  GDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NVPGIYAIGDVTRPPLLAHKAMKEGLIAAENAAGGNAVMDYQ-IPNVVYTSPEWAAVGLT  358
            N+  +YAIGD +   LLAHKA  E+ IAAE  +G N+V+D+Q +P V+++ PE A  GLT
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  359  EEEATKAGYKVKVGKFPLSASGRAMTLEATDGLIKLIGDAETDLLLGGHIVGPNASDMIA  418
            E EA   GY    ++FP+ A++RA+++  +DG+++++++ +T  +LG ++VGP+ S +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  419  EIALALEMGATVTDVGLTVHAHPTLSEGIMEAAEHLHRQAIHIANR  464
            E  +A+E GA   D++LT+HAHPTL+E +MEAAE +  +A H+ N+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

457) MDS_2262 in NC_015410


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  284 bits (1062),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 327/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQGKDGKIALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYHEAKEGFAVHGIEAKG-VTIDVPAMIGRKATIVKNLTGGIGSLFKANGVTLLEG  120
             +S +  + K++ ++ G+   G V +D+P ++ +K  IV++LT+GI +L+K+NGV ++ G
Sbjct  90   SASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLAGKQVEVTGTDGKTQVVEGAHVIIASGSKPVEIPPAPVDQDVIVDSTGALEFQSV  180
            ++  L+  ++     ++  Q+    ++I+A GS PVE+ + P DQ  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGSEVTVLEAMDKFLAAADEQIAKEAQKTLTKQGLDIR  240
            P+ L V+G+G IGLELG+  A++G+ VT+LE+ D +L+++D  ++K  ++ L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTGSEIKKKQVVVSFTDANGEQKMTFDKLIVAVGRRPVTTDLLAADSGVDLDERGF  300
             +A V G+E    +V V       E+ +  D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IFVNDQCETSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +N++C+T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQQLKAEGVAVNVGTFPFAASGRAMAANDTGGFVKVIADANTDRVLGVHVI  420
            PE+A  G TE++ K  G     + FPF A++RA++ +D++GFV+V+A+ NT RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

458) Mmol_0656 in NC_012968


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  284 bits (1062),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 188/462 (41%), Positives = 319/462 (70%), Gaps = 14/462 (3%)

Query  115  GDSDINTQVVVLGSGPGGYTAAFRAADLGKQVVLIERYSTLGGVCLNVGCIPSKALLHTA  174
            G+     +++V+G+G+GGY AA+RAA+LGK+VVL+++ + LGGVCLN GCIPSKAL+ ++
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISAS  92

Query  175  KVITEAEESSHHGVKF-GAPQVDLEQLRDWKANDVVGKLTGGLAAMAKQRNVTVVQGVGK  233
              + +  +++  G+K  G  QVD+ ++  WK +++V KLT+G+ ++ K   V V+ G + 
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISGEA-  150

Query  234  FTSANQIAVTAADGKVTTVGFENAIIAAGSQATKFPGVEADE-RIMDSTGALALADVPKR  292
            + +  +IA    ++     ++ + I+A GS +  + ++  D+ RI+ ST AL L +VP++
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  293  MLVIGGGIIGLEMGTVYDALGSKVSVVEFTDGLVQGCDRDLVRPLQKRMEKRFEAIMLST  352
            ++V+GGG IGLE+GT Y  +G+KV+++E +D ++ G D  L + +++++     +++  +
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  353  KVAKMEPKADGIHVSFEGVNGNEDAPKGVEVYDRVLVSIGRRPNGKNIGAENAGVAVDDY  412
             V   E  +D ++V  + V+G+E+    +   D  LVSIGR+PN  +IG EN GV +DD 
Sbjct  271  LVQGGENTGDEVNVHVQ-VDGKEE----IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  413  GFINVDKQMRTNVPHIFAIGDIVGQPMLAHKATHEAKVAAEVIAGEK--VEFVASVIPSV  470
            GFI+++++ +TN+ H++AIGD  G  +LAHKA+ EAK+AAEVI+G++  ++F A  +P V
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQA--MPFV  383

Query  471  AYTDPEVAWVGVTETEAKAKGMAIEKASFPWAASGRALSIARTEGATKLIFDKETHRLIG  530
             ++DPEVA  G+TE EAK KG     + FP  A++RALS++ ++G  +++ +K+T R++G
Sbjct  384  IFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLG  443

Query  531  AGIVGVNAGELLAEAVLAIEMGADAHDLGLTIHAHPTLSETV  572
              +VG + + L+AEAV+AIE GA+A+DL+LTIHAHPTL+E +
Sbjct  444  VQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

459) lpd in NC_016940


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1061),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 208/460 (46%), Positives = 324/460 (71%), Gaps = 10/460 (2%)

Query  2    KY-DLTIIGSGPGGYVAAIRAAQLGQKVAIIERYSTLGGTCLNVGCIPSKALLDSSEHFH  60
            KY DL +IG+G+GGYVAAIRAAQLG+KV ++++ + LGG CLN GCIPSKAL+ +SE+  
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVK  96

Query  61   AAEKKFQDHGINVSG-LSVDFEQMVKRKDEVVSQTCAGVEFLMKKNKITVYTGHGSFVSR  119
               K  +  G++VSG + VD  ++VK+KD +V++   G+  L+K N + V +G+ ++++ 
Sbjct  97   HI-KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE-AYLTE  154

Query  120  NTIQIAPKDGEGETQTIETDKVIIATGSKPVLPAAFNYDKQRVISSTEALTLKEVPKRLL  179
               +IA    E+E Q +    +I+A GS PV   +  +D++R+ISSTEAL L+EVP++L+
Sbjct  155  A--HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  180  VIGAGVIGLELGSVYARLGTEVEVIEYQNAVLGGMDADLGKEMRKVLKKELKIKFHLNHK  239
            V+G+G IGLELG+ YA++G+ V ++E  +++L+G D+ L K +++ LK E+ I    +  
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLK-EIGITVITDAL  271

Query  240  VETVENLGEEVKLVAESRKDGKKLELQADYCLVAIGRRPYTDALGLENVGVELDERGRIK  299
            V+  EN G+EV++  +   DGK   +Q DYCLV+IGR+P T+ +GLEN+GV LD++G IK
Sbjct  272  VQGGENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  300  IDNHMQTNVEGIFAIGDVVRGAMLAHKAEEEGVYVAEYISGQKPHINYNLIPGVVYTWPE  359
            I+N  QTN+E ++AIGD   G +LAHKA  E+   AE ISGQ++ I+++ +P V+++ PE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  360  VAAVGQTEEELKAAKVAYKVGKFPFKALGRARASADTNGFVKILSDKETDEVLGVHMIGA  419
            VA  G TE E K        ++FPF+A +RA + +D++GFV+++++K+T  VLGV+M+G+
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  420  RCADLIIEAVAAMEFRASAEDMSRYSHPHPTFTEAVKEAA  459
              + LI EAV A+E  A+AED+S   H+HPT+ E++ EAA
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

460) Ththe16_0157 in NC_017272


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1061),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 212/470 (46%), Positives = 335/470 (72%), Gaps = 12/470 (2%)

Query  1    MKTY-DLIVIGTGPGGYHAAIRAAQLGLKVLaveagevggvCLNVGCIPTKallhaaetl  59
            +K Y DL+VIG+G+GGY AAIRAAQLG KV+ V+ +E+GGVCLN GCIP+KAL+ A+E +
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  60   hhlKVAEGFGLKAKPEL--DLKKLGAWRDGVVKKLTGGVAGLLKGNKVELLRGFARFKGP  117
             H+K A+  GLK   E+  D+  +  W+DG+V+KLT+G+  LLKGN VE++ G A +  +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  118  R----EIEVNGETYGAQSFIIATGSEPMPLKGFPFGED-VWDSTRALRVEEGIPKRLLVI  172
            +     IE + + ++ + +I+A GS P+ LK+ PF++  +  ST AL+++E +P++L+V+
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVV  214

Query  173  GGGAVGLELGQIYHRLGSEVTLIEYMPEILPAGDRETAALLRKALEKEGLKVRTGTKAVG  232
            GGG +GLELG  Y ++G+ VT++E    IL++ D   +  +++ L   G+ V T++   G
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  233  YEKKQDGLHVLLEAAQGGQQEEIVVDKILVAVGRKPRTEGLGLEKAGVKVDERGFIQVNA  292
             E+  D ++V ++   +G++E I  D  LV++GRKP T  +GLE+ GV +D++GFI++N 
Sbjct  275  GENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  293  RMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAASKDSVFDYQ-VPSVVYTSPEWAG  351
            + +T++  VYAIGD A   LLAHKA  E+ IAAE  ++++SV+D+Q +P V+++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  352  VGLTEEEARKAGYKVKVGKFPFSASGRALTLGGAEGMVKVVGDAETDLLLGVFIVGPQAG  411
             GLTE EA+  GY    ++FPF A++RAL++++A+G V+VV++ +T  +LGV +VGP+ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  412  EFIAEAALALEMGATLTDLALTIHPHPTLSESLMEAAEAFHKQAIHILNR  461
             +IAEA +A+E GA   DL+LTIH+HPTL+E+LMEAAE+   +A H+LN+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

461) lpdA in NC_010471


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1058),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 198/461 (43%), Positives = 328/461 (72%), Gaps = 4/461 (0%)

Query  2    VVGAQAREIDTVIIGSGPGGYVAAIRAAELGQHVTIIERENIGGVCLNVGCIPSKALINV  61
            + G   + +D ++IG+G+GGYVAAIRAA+LG+ V ++++ ++GGVCLN GCIPSKALI+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  62   GHHYRNALAETPFGLHIDGAT-LDWQKVQDWKQNKVVNTLTSGVSMLLKKHHVEIIKGEA  120
            +++ ++       GL + G   +D   V  WK+  +VN LT G+  LLK + VE+I GEA
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEA  150

Query  121  TFNDNETLNVVQEDGHELLQFNNAIIATGSRPIEIPTMPFGG-RIIDSTGALSLENIPKK  179
             + + +  ++  ED ++++ +++ I+A GS P+E+ +MPF+  RII ST AL L+++P+ 
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  180  liivgggvigselggAYANLGTEVTIVEGLDHTLNGFDAEMTKPVLADFEQHGGHIVTSA  239
            L++VGGG IG ELG AYA++G+ VTI+EG D  L+G D+ +TK V  ++ + G  ++T A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  240  MAKSAQQTDQDVSLTYEVDGEEHTITGDYLLVAVGRRANTDGLGLNNTDIKLSDRGLIEI  299
            + +++++T+++V++  +VDG E+ I  DY LV++GR++NT+ +GL+N ++ L D+G+I I
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  300  ADTMQTNVSHIYAIGDVTIGPQLAHkasfqgkiaaaaiageaqaHDLHYSLPAVAYTQFE  359
             +  QTN+ H+YAIGD + G  LAHKAS+++KIAA  I+G+    D++ ++P V +++ E
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPE  389

Query  360  LATTGETPESAKAKQLDVKIAKFPFAANGRAISMDETTGFIRLISDTATHGLLGAQIVGP  419
            +A TG T   AK K  +   ++FPF AN+RA+S+ ++ GF++++++  T  +LG Q+VGP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  420  SASDLISELSLAIENGLTTNDISLTIHPHPTLGEAIMDTAE  460
              S LI+E  +AIE G  ++D+SLTIH+HPTL E++M++AE
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAE  490

462) PADK2_17770 in NC_018080


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

463) lpdG in NC_011770


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

464) lpdG in NC_017548


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

465) lpdG in NC_017549


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

466) lpdA1 in NC_009656


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

467) lpdG in NC_002516


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

468) M062_08470 in NC_021577


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

469) lpdG in NC_008463


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

470) Pmen_2501 in NC_009439


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 191/477 (41%), Positives = 328/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQGKDGKIALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI+AAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSWKYHEAKEGFAVHGIEAKG-VTIDVPAMIGRKANIVKNLTGGIGALFKANGVTLLEG  120
             +S +  + K++ ++ G+   G V +D+P ++ +K  IV++LT+GI +L+K+NGV ++ G
Sbjct  90   SASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLAGKQVEVTGIDGKTQVVEGAHVIIASGSKPVEIPPAPVDQDVIVDSTGALEFQSV  180
            ++  L+  ++    I++  Q+    ++I+A GS PVE+ + P DQ  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGSEVTVLEAMDKFLAAADEQIAKEAQKTLTKQGLDIR  240
            P+ L V+G+G IGLELG+  A++G+ VT+LE+ D +L+++D  ++K  ++ L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKMTFDKLIVAVGRRPVTTDLLAADSGVDLDERGF  300
             +A V ++E    +V V       E+ +  D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IFVNDQCETSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +N++C+T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQQLKAEGVAVNVGTFPFAASGRAMAANDTGGLVKVIADANTDRVLGVHVI  420
            PE+A  G TE++ K  G     + FPF A++RA++ +D++G+V+V+A+ NT RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V G A H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

471) TCCBUS3UF1_20460 in NC_017278


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1053),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 207/470 (45%), Positives = 334/470 (72%), Gaps = 12/470 (2%)

Query  1    MKTY-DLIVIGTGPGGYHAAIRGAQlglrvlaveaaevggvCLNVGCIPTKallhaaetl  59
            +K Y DL+VIG+G+GGY AAIR+AQLG +V+ V+ AE+GGVCLN GCIP+KAL+ A+E +
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  60   hhlKVAEGFGVKAKPEVDLDR--LGGWRESVVKRLTGGVAGLLKGNKVELVRGFARLTGP  117
             H+K A+  G+K   EV++D   +  W++++V++LT+G+  LLKGN VE++ G A LT +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  118  K----EVEVNGERYGAKSLILATGSEPAPLPGFPFGEE-VWDSTRALRVEEGLPKRLLVI  172
                  +E + + ++ K LILA GS P  L + PF++  +  ST AL+++E +P++L+V+
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVV  214

Query  173  GGGAVGLEFGQIYRRLGSEVTLIEYMPEILPAGEGETAALLRKALEKEGLRVRTGTKATG  232
            GGG +GLE+G  Y ++G+ VT++E    IL++ +   +  +++ L   G+ V T++   G
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  233  YERRADGLHVRLQPAQGGEEETLVVDRILVAVGRRPRTQGLGLEALGIALDERGFVRVNG  292
             E  +D ++V++Q   +G EE +  D  LV++GR+P T  +GLE +G+ LD++GF+++N 
Sbjct  275  GENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  293  RMETSVPGVYAIGDVAGPPLLAHKAMKEGIVAAENAAGKNAFFDYQ-IPSVVYTSPEWAG  351
            + +T++  VYAIGD AG  LLAHKA  E+ +AAE  +G+N+ +D+Q +P V+++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  352  VGLTEEAAKRAGYKVKVGRFPLSASGRALTLGGAEGLIKVVGDEESDLLLGVFIVGPQAG  411
             GLTE  AK  GY    +RFP+ A++RAL++++A+G+++VV++ ++  +LGV +VGP+ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  412  ELIAEATLALEMGATVADLALTVHAHPTLSEGLMEAAEALHKQAVHILNR  461
             LIAEA +A+E GA   DL+LT+HAHPTL+E LMEAAE++  +A H+LN+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

472) Deipr_0027 in NC_015161


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1053),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 194/465 (42%), Positives = 322/465 (70%), Gaps = 8/465 (1%)

Query  7    DVIVIGAGPGGYHAAIRAGQLGLKTAIVEREKVGGVCLNVGCIPTKAMLHAAEVMMETKH  66
            D++VIGAG+GGY AAIRA+QLG K  +V++  +GGVCLN GCIP+KA++ A+E + + KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGEFGLNFA-ETTLDIAKLNGWKDGIVNRLTGGVSGLLKANKVTVLSGQASFVDEH----  121
            A   GL+ + E  +D++ +  WKDGIVN+LT+G+  LLK+N V V+SG+A + + H    
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  122  TVEVDGQRHTASHFIIATGSEPAKLPGVEVDQEVIVDSTGALVMPDPVPARMLCIGGGVI  181
             +E + Q  +  ++I+A GS P  L ++  DQ  I+ ST AL + + VP +++ +GGG I
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGYI  219

Query  182  GFEFAQVYNNLGSEVKIIEFMPNVIPGADADAVAEFTKIMKKQGISIETQTKANRAERKA  241
            G+E++  Y ++G+ V I+E    +++G+D+       + +K  GI++ T++  + +E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  242  DGVHVEIEDVKSGEKRTEVFDRVLVAIGRRPRTDGLNADKAGVAVTDRGFIPADKQQRTN  301
            D V+V+++ V + E   +  D  LV+IGR+P T+ +  ++ GV + D+GFI  +++ +TN
Sbjct  280  DEVNVHVQ-VDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  302  VPHIFSIGDVAGNPMLAHKAMKEGLVAAEVIAGKPSEQDAVAIPGVVYTNPELAWVGLTE  361
            + H+++IGD AG  +LAHKA  E+ +AAEVI+G+ S  D  A+P V++++PE+A  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  362  AEAVDKGYKIKKGVFPMAASGRAMTLQQTGGFIKMIVEEDTDLVLGVHIVGPRASDllge  421
             EA +KGY    + FP  A++RA+++ +++GF++++ E +T  VLGV++VGP  S L++E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  422  aglalemaaTASDIALTIHAHPTLGEGVLEAAEAVHKQAIHIVNR  466
            A +A+E +A A D++LTIHAHPTL E ++EAAE+V  +A H++N+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

473) BAA13334_II01340 in NC_016777


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1053),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 177/437 (41%), Positives = 298/437 (69%), Gaps = 7/437 (1%)

Query  1    MLVEKTRLGGTCLNVGCIPSKALIHAADEFHCLTTFAAKSPLGIT-TQNPAIDFARTLEW  59
            +LV+K+ LGG CLN GCIPSKALI A++    +  +   + +G+  + +  +D +  + W
Sbjct  66   VLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKVSGEVQVDMPEVVKW  122

Query  60   KDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAENIVIATGSVP  119
            KDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   ++++A GS+P
Sbjct  123  KDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLP  182

Query  120  VEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSRVTVVEATDR  178
            VE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++VT++E++D 
Sbjct  183  VELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDT  242

Query  179  ILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVKAIEADKILV  237
            IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG    I+ D  LV
Sbjct  243  ILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLV  302

Query  238  TVGRKPQSDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPMLAHRAMAQGE  296
            ++GRKP+++  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +LAH+A  ++ 
Sbjct  303  SIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAK  362

Query  297  MVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFPFQANGRAMT  356
            + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FPFQAN+RA++
Sbjct  363  IAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALS  422

Query  357  MERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAATIHAHPTLG  416
            +   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ TIHAHPTL 
Sbjct  423  VSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

Query  417  EGFAEASMKALGHALHV  433
            E + EA+   +GHA H+
Sbjct  483  EPLMEAAEGVMGHATHM  499

474) lpdA-3 in NC_007624


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1053),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 177/437 (41%), Positives = 298/437 (69%), Gaps = 7/437 (1%)

Query  1    MLVEKTRLGGTCLNVGCIPSKALIHAADEFHCLTTFAAKSPLGIT-TQNPAIDFARTLEW  59
            +LV+K+ LGG CLN GCIPSKALI A++    +  +   + +G+  + +  +D +  + W
Sbjct  66   VLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKVSGEVQVDMPEVVKW  122

Query  60   KDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAENIVIATGSVP  119
            KDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   ++++A GS+P
Sbjct  123  KDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLP  182

Query  120  VEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSRVTVVEATDR  178
            VE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++VT++E++D 
Sbjct  183  VELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDT  242

Query  179  ILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVKAIEADKILV  237
            IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG    I+ D  LV
Sbjct  243  ILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLV  302

Query  238  TVGRKPQSDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPMLAHRAMAQGE  296
            ++GRKP+++  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +LAH+A  ++ 
Sbjct  303  SIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAK  362

Query  297  MVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFPFQANGRAMT  356
            + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FPFQAN+RA++
Sbjct  363  IAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALS  422

Query  357  MERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAATIHAHPTLG  416
            +   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ TIHAHPTL 
Sbjct  423  VSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

Query  417  EGFAEASMKALGHALHV  433
            E + EA+   +GHA H+
Sbjct  483  EPLMEAAEGVMGHATHM  499

475) LCGT_0029 in NC_015930


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1051),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 206/466 (45%), Positives = 332/466 (72%), Gaps = 8/466 (1%)

Query  10   VDTVVIGSGPGGYVAAIRAAELGKKVVVIEKDNVGGVCLNIGCIPSKALINVGHHYQDAL  69
            VD +VIG+G+GGYVAAIRAA+LGKKVV+++K ++GGVCLN GCIPSKALI+ +++    +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER----V  95

Query  70   KQEAGKSPFGLS-NGEVNLDWAAAQSWKDEKVVKQLTGGIAMLLKKHKIELIKGTAEFID  128
            K+    +  GL  +GEV++D +    WKD  +V++LT+GI  LLK + +E+I G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NETINVEQEDGFQLLNFQNAIIATGSRPIEIPSFPYGG-RIIDSTGALNLKEIPKHliiv  187
             +  ++  ED  Q++++++ I+A GS P+E+ S P++  RII ST AL+L+E+P+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKTAGSEIYTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  + T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDTDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDMLGLNNTDVKLTDRGLIEVDDSF  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ +GL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  QTSVPHIYAIGDVVPGPMLahkasfqakiaaaaiaggedaVDLHIALPAVAYTTTELATV  367
            QT++ H+YAIGD   G +LAHKAS++AKIAA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRMDQVKISKFPFAANGRAISMDDTTGFIRLITENKEGAVIGAQIVGPGASD  427
            G T    K++  +   S+FPF AN+RA+S+ D+ GF+++++E++   V+G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  428  LISGLALAIENGLTSKDISLTIQPHPTLGEAIMDTAEIADGLPIHV  473
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

476) LCGL_0029 in NC_017490


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1051),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 206/466 (45%), Positives = 332/466 (72%), Gaps = 8/466 (1%)

Query  10   VDTVVIGSGPGGYVAAIRAAELGKKVVVIEKDNVGGVCLNIGCIPSKALINVGHHYQDAL  69
            VD +VIG+G+GGYVAAIRAA+LGKKVV+++K ++GGVCLN GCIPSKALI+ +++    +
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER----V  95

Query  70   KQEAGKSPFGLS-NGEVNLDWAAAQSWKDEKVVKQLTGGIAMLLKKHKIELIKGTAEFID  128
            K+    +  GL  +GEV++D +    WKD  +V++LT+GI  LLK + +E+I G A + +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDG-IVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  129  NETINVEQEDGFQLLNFQNAIIATGSRPIEIPSFPYGG-RIIDSTGALNLKEIPKHliiv  187
             +  ++  ED  Q++++++ I+A GS P+E+ S P++  RII ST AL+L+E+P+HL++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  188  gggvigselggAYRMLGSKITIVEGLDHILNGFDKEMSDIIANRVKTAGSEIYTSAMAKS  247
            GGG IG ELG AY  +G+K+TI+EG D IL+G D  ++  +  ++K  G  + T A+ ++
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  248  ATQTDTDVTLTFEVDGKEQTVTGDYLLVSVGRRPNTDMLGLNNTDVKLTDRGLIEVDDSF  307
            + +T+ +V +  +VDGKE+ +  DY LVS+GR+PNT+ +GL+N +V L D+G+I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  308  QTSVPHIYAIGDVVPGPMLahkasfqakiaaaaiaggedaVDLHIALPAVAYTTTELATV  367
            QT++ H+YAIGD   G +LAHKAS++AKIAA  I+G +  +D++ A+P V ++  E+A  
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ-AMPFVIFSDPEVAYT  393

Query  368  GETPESVKDRMDQVKISKFPFAANGRAISMDDTTGFIRLITENKEGAVIGAQIVGPGASD  427
            G T    K++  +   S+FPF AN+RA+S+ D+ GF+++++E++   V+G Q+VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  428  LISGLALAIENGLTSKDISLTIQPHPTLGEAIMDTAEIADGLPIHV  473
            LI+   +AIE G  + D+SLTI++HPTL E++M++AE   G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

477) Emtol_1014 in NC_018748


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1051),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 191/453 (43%), Positives = 314/453 (70%), Gaps = 5/453 (1%)

Query  4    DVVVIGSGPGGYVAAIRSAQLGKKVAIIEKYNVLGGTCLNVGCIPSKALLDSSEHFYNAT  63
            D++VIG+G+GGYVAAIR+AQLGKKV +++K   LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERV-KHI  98

Query  64   HHFADHGIEISAPV-ANLGKMIGRKNGVVEKMNAGVNFLMKKNKITVYNGLGSFVDKNTI  122
             H    G+ +S+ V  ++  ++ +K+G+V+K+  G+  L+K N + V +G  +++    I
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  123  KITKTDGSEETITTQQVIIATGSKPTILPFMNYDKKRIITSTEALNLQEIPKHLIVIGAG  182
               K ++ E+ ++ +++I+A GS P  L  M +D+KRII+STEAL+LQE+P+HL+V+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGAELGSVYARLGAKVSFVEFADSMIPTMDKTMGKELQKSVKKLGADFYFNTKVTKIEN  242
             IG ELG+ YA++GAKV+++E +D++++  D  + K +++ +K +G     ++ V   EN
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  243  SGEEVTVTAEATDGKPVEIKGDYCLVCIGRRAYTDGLNLEAVGVATDRGKIVVDEHTLET  302
            +G+EV V  +  DGK   I+ DYCLV IGR++ T+ + LE +GV  D   ++  ++  +T
Sbjct  278  TGDEVNVHVQ-VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  303  NVKGIYAIGDVIRGAMLAHKAEEEGVFVAEVMAGQKPHINYNLIPGVVYTWPEVASVGST  362
            N+  +YAIGD   G +LAHKA  E+ + AEV++GQ++ I+++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  EEELKTKGVAYKTGNFPFKALGRATASGDTDGLVKILADAATDEILGVHIIGARAADMIA  422
            E E K KG    ++ FPF+A +RA + +D+DG+V+++A+  T  +LGV+++G+  + +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  EAVTAMEFRASAEDIGRISHAHPTYMEAVKEAA  455
            EAV A+E  A+AED++   HAHPT  E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

478) lpdA in NC_002607


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1050),  Expect = 9e-77, Method: Compositional matrix adjust.
 Identities = 190/451 (43%), Positives = 315/451 (70%), Gaps = 6/451 (1%)

Query  26   IRAGQLGLDVTLVEKDAYGGTCLNYGCIPSKAMITASGVAHEAGHAEEMG--VYADPDVD  83
            IRA+QLG  V LV+K   GG CLN GCIPSKA+I+AS    +  HA+ MG  V ++ +VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  84   VAEMVDWKDGVVDQLTGGVEKLCKANGVNLIEGRAEFAGSDKLRVVHGGDGQGSETIEYE  143
            ++E+V WKDG+V++LT+G+  L K+NGV++I G A ++ ++  ++   ++ Q    + Y 
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQ---IFSYK  172

Query  144  HAIVSTGSRPIEVPGFDFGDDPVLDSRQALAMAELPSSMVIVGGGYIGMELSTVFAKLGV  203
            + I++ GS P+E+ +  F++  ++ S +AL + E+P+ +V+VGGGYIG+EL+T +AK+G 
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  204  DVTVVEMLDGILPQYGDDIARPVRQRAEELGIDFHFGLAADSWTDTDDGIVVtaadedge  263
             VT++E  D IL+  +  +++ V+++  E+GI    +   ++  +T+D + V    ++ E
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKE  292

Query  264  etefeteKVLVAVGRQPVTDTLNLDAVGLEPNDDGRLETDHEARTDVENVFAIGDVAPGP  323
            E        LV++GR+P T+ + L+ +G+  +D+G +  ++  +T++E+V+AIGD A G 
Sbjct  293  EIIQCDY-CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGD  351

Query  324  MLAHKASKegevaaeviagepaaLDYQAVPAAVFTDPEIGTVGLTEDDAAAQGFDPVVGT  383
            +LAHKAS E+ +AAEVI+G+ + +D+QA+P  +F+DPE++  GLTE +A  +G++ V + 
Sbjct  352  LLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSR  411

Query  384  FPFNASGRALTTGHDDGFVEVVADEESGFLLGAQIVGPEASELVAELGLAIEMGATLEDV  443
            FPF+A++RAL+ ++ DGFV+VVA+ ++  +LG Q+VGPE S L+AE  +AIE GA  ED+
Sbjct  412  FPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDL  471

Query  444  ASTIHTHPTLSEATMEAAEHALGHAVHTLNR  474
            + TIH+HPTL+E+ MEAAE  +GHA H LN+
Sbjct  472  SLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

479) lpdA in NC_010364


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  281 bits (1050),  Expect = 9e-77, Method: Compositional matrix adjust.
 Identities = 190/451 (43%), Positives = 315/451 (70%), Gaps = 6/451 (1%)

Query  26   IRAGQLGLDVTLVEKDAYGGTCLNYGCIPSKAMITASGVAHEAGHAEEMG--VYADPDVD  83
            IRA+QLG  V LV+K   GG CLN GCIPSKA+I+AS    +  HA+ MG  V ++ +VD
Sbjct  56   IRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQVD  115

Query  84   VAEMVDWKDGVVDQLTGGVEKLCKANGVNLIEGRAEFAGSDKLRVVHGGDGQGSETIEYE  143
            ++E+V WKDG+V++LT+G+  L K+NGV++I G A ++ ++  ++   ++ Q    + Y 
Sbjct  116  MPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQ---IFSYK  172

Query  144  HAIVSTGSRPIEVPGFDFGDDPVLDSRQALAMAELPSSMVIVGGGYIGMELSTVFAKLGV  203
            + I++ GS P+E+ +  F++  ++ S +AL + E+P+ +V+VGGGYIG+EL+T +AK+G 
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  204  DVTVVEMLDGILPQYGDDIARPVRQRAEELGIDFHFGLAADSWTDTDDGIVVtaadedge  263
             VT++E  D IL+  +  +++ V+++  E+GI    +   ++  +T+D + V    ++ E
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKE  292

Query  264  etefeteKVLVAVGRQPVTDTLNLDAVGLEPNDDGRLETDHEARTDVENVFAIGDVAPGP  323
            E        LV++GR+P T+ + L+ +G+  +D+G +  ++  +T++E+V+AIGD A G 
Sbjct  293  EIIQCDY-CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGD  351

Query  324  MLAHKASKegevaaeviagepaaLDYQAVPAAVFTDPEIGTVGLTEDDAAAQGFDPVVGT  383
            +LAHKAS E+ +AAEVI+G+ + +D+QA+P  +F+DPE++  GLTE +A  +G++ V + 
Sbjct  352  LLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSR  411

Query  384  FPFNASGRALTTGHDDGFVEVVADEESGFLLGAQIVGPEASELVAELGLAIEMGATLEDV  443
            FPF+A++RAL+ ++ DGFV+VVA+ ++  +LG Q+VGPE S L+AE  +AIE GA  ED+
Sbjct  412  FPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDL  471

Query  444  ASTIHTHPTLSEATMEAAEHALGHAVHTLNR  474
            + TIH+HPTL+E+ MEAAE  +GHA H LN+
Sbjct  472  SLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

480) Bpet3508 in NC_010170


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  280 bits (1049),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 202/466 (44%), Positives = 307/466 (66%), Gaps = 7/466 (1%)

Query  4    TRTTTLLVIGGGPGGYVAAIRAGQLGVSTIVVEGQQPGGTCLNIGCIPSKALIHaaqeye  63
             +   LLVIG+G+GGYVAAIRA+QLG   ++V+  + GG CLN GCIPSKALI      E
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALI---SASE  93

Query  64   rareyagaSPLGISVQAPA-IDIGKTVAWKDGIVARLTGGVEALLKKNGVQLVRGWARVL  122
            R ++   A+ +G+ V +   +D+   V WKDGIV +LT+G+ +LLK NGV+++ G A + 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  123  DGKTVEVDTGQGSQRIQCEHLLLAAGSEPMPLPSMPFAG-RVISSTEALSPASIPGRLVV  181
            ++    +   +  Q +   +L+LA GS P+ L SMPF   R+ISSTEAL    +P +LVV
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  182  VGGGYIGLELGTVYRKLGAEVTVVEAQERILPTYDAELTKPVAAALARMGVQLCLGRKVL  241
            VGGGYIGLELGT Y K+GA VT++E+ + IL+  D+ LTK V   L  +G+ +  +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  242  GMNAAGDAVRVQ-DASGAETALPADQVLLAIGRRPRTQGWGLENLQLDRAGNAL-RIDDQ  299
            G + +GD V V+ +  G E  +  D  L++IGR+P T   GLEN+ +   ++++ +I+++
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  300  CRTSMRNVWAIGDIAGEPMLAHRAMAQGEMVAELVAGQRRRFAPAAIPAVCFTDPEIVTa  359
            C+T++ +V AIGD AG  +LAH+A  ++ + AE+++GQ   +   A+P V F+DPE+  +
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  360  glapqqaqaaglDCVTAAFPFAANGRAMTLESTDGFVRVVARRDNHLVVGWQAVGRGVSE  419
            GL+ ++A+  G + V++ FPF AN+RA+++  +DGFV+VVA ++   V+G Q VG  VS 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  420  LAAAFSQSLEMGARLEDVGGTIHAHPTLGEAVQEAALRALGHALHI  465
            L A    ++E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

481) G655_17275 in NC_020912


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  280 bits (1049),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 192/477 (41%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAIRAAQLG K   ++K         LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKYHEAKEAFKVHGIEAKG-VTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEG  120
             +S +  + K+A +  G+   G V +D+P +V +K  IV++LT+GI TL+K+NGV  + G
Sbjct  90   SASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  121  HGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAV  180
            ++  L++ ++    +++  Q++   ++I+A GS PVE+ + P+ +  I+ ST AL++Q V
Sbjct  149  EA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIR  240
            P+ L V+G+G IGLELG+  A++GA VT+LE+ D +L+++D  ++K   + L   G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  LGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
             +A V ++E    +V V       E+    D  +V++GR+P T  +   + GV LD++GF
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDYCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTH  360
            I +++ C+T++  V+AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G E   + FPF A++RA++ +D+ G+V+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIANRKK  477
            GP  + L+ ++ +++E G++AEDL++ + +HPTL+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

482) Hmuk_0985 in NC_013202


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  279 bits (1045),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 189/449 (43%), Positives = 313/449 (70%), Gaps = 6/449 (1%)

Query  24   AAIRAAQLGVDTTLVERDAYGGTCLNHGCIPSKALISGADVAHRAGQAEEMG--VYADPA  81
            AAIRAAQLG    LV++   GG CLN+GCIPSKALIS+++   +  +A+ MG  V ++  
Sbjct  54   AAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQ  113

Query  82   VDLSGMVEWKDGVVTRLTRGVESLAKSAGVELIEGEATFTGEHTARIAHGGDGQGSETVE  141
            VD++ +V WKDG+V +LT G+ +L K+ GVE+I GEA +T  H A+I   ++ Q      
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQ---IFS  170

Query  142  FEHAIVATGSRPIQVPGFEFDADPIlsskealaleslPERLLVVGAGYIGMELSTVFQKL  201
            + + I+A GS P+++ +  FD   I+SS EAL L+ +P++L+VVG+GYIG+EL+T + K+
Sbjct  171  YKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKF  230

Query  202  GSEVTVVEMLDEALPGFEDDIATLVRERAEEIGVDFYFGEAADSWEQAGEEIVVHTEDED  261
            G+ VT++E  D  L+G +  ++  V+ +  EIG+    +   ++ E++G+E+ VH + ++
Sbjct  231  GAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDG  290

Query  262  GDLTRFDAEKALVAVGRQAVTDGLGLDELGIEPDEDGFLATDEQARTDAEHVFAVGDVAG  321
             +   ++ +  LV++GR++ T+ +GL+++G+  D++GF+  +++ +T+ EHV+A+GD AG
Sbjct  291  KE-EIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAG  349

Query  322  EPMLAHKamaegevaaevvagepaaLDHQAIPAAVFTEPEIGTVGMTEAEAADAGFDPVV  381
              +LAHKA  E+ +AAEV++G+ + +D QA+P  +F++PE++  G+TE EA + G++ V 
Sbjct  350  GDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVS  409

Query  382  GQMPMRANGRALTVDEKAGFVRIVADDETGFVLGAQIVGPEASESIAEVGLAIEMGATLE  441
            ++ P +AN+RAL+V +  GFV++VA+ +T  VLG Q+VGPE S  IAE  +AIE GA  E
Sbjct  410  SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAE  469

Query  442  DIAGTIHTHPTLSEAVHEAALAARGEAIH  470
            D++ TIH+HPTL+E++ EAA +  G+A H
Sbjct  470  DLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

483) Sinac_6538 in NC_019892


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  279 bits (1044),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 204/473 (44%), Positives = 326/473 (69%), Gaps = 9/473 (1%)

Query  1    MAPESNRY-DLVVIGSGPGGYVAAIRAAQLGMKVACVEKRESLGGTCLNIGCIPSKALLD  59
            M+ E ++Y DL+VIG+G+GGYVAAIRAAQLG KV  V+K E LGG CLN GCIPSKAL+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALIS  90

Query  60   SSELYHLAHTKFAKH-GIKVDA-IGLDLPAMLARKDTVVKSLTDGLKFLFKKNKIEPVFG  117
            +SE  ++ H K A+  G+KV + + +D+P ++ +KD +V+ LTDG++ L+K N +E + G
Sbjct  91   ASE--RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG  148

Query  118  TARVASGESVVVRDAKGVETTLETKHILLATGSAPVNLPFIPFNGKTIVSSTEALTFDRV  177
             A ++ ++   ++     E  +  K+++LA GS PV+L  +PF+ K I+SSTEAL ++ V
Sbjct  149  EAYLTEAHIAKIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  178  PEHLVVVGGGYIGLELGSVWKRLGAKVTVIEFLPRIVPMADLEVGTLLHKSLIKQGLEFH  237
            P+HLVVVGGGYIGLELG+   ++GAKVT++E    I++ +D  +   + + L   G+   
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  238  LETKVTGAKVEGDRVTVTAETKDGKVLTVPCDRVLVAVGRRPHTEGLGLVEAGVTVDPKT  297
             ++ V G+   GD V V  +  DGK   + CD  LV++GR+P+T  +GL + GV +D + 
Sbjct  268  TDALVQGGENTGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQ-  325

Query  298  GKVPIDAHYRTNVPTISAIGDLVDGPMLAHKAEDEGVAFAEILAGKAGHVDYNTIPSVIY  357
            G + I+   +TN+  + AIGD  +G +LAHKA  E+   AE+++G+ + +D++++P VI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  358  TWPEMASVGITEEQAKERKLEYKVGKYPFLPNGRAKAMDETEGLVKILADAKTDRVLGVH  417
            + PE+A  G+TE +AKE+  E   +++PF +N+RA ++ +++G+V+++A+ +T RVLGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  418  IFGPRASDLIAEAVTIMEFAGSAEDIARISHAHPTLSEAVREAAMAVDRRAIH  470
            + GP  S LIAEAV  +E +++AED++   HAHPTL+E++ EAA +V  +A H
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

484) Geob_1950 in NC_011979


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  279 bits (1044),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 200/466 (43%), Positives = 323/466 (70%), Gaps = 10/466 (2%)

Query  7    DLIIIGAGPGGYVAAIRAAQLGMKVAVVERGERLGGVCLNEGCIPSKALLDSSELFALAR  66
            DL++IGAG+GGYVAAIRAAQLG KV +V+++E LGGVCLN GCIPSKAL+ +SE     +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   DKFALHGIGINAPT-LDLTKMMARKDDVVKKLTDGIAFLFKKNKIIRILGTAKLGAAGNG  125
            +  ++ G+ +++   +D+  ++ +KD++V+KLTDGI  L+K N +  I G A L  A   
Sbjct  100  HANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA---  155

Query  126  ERRAVEVLGAGGEKQAIVGKHILLATGSQAIEVPGLPFDGETVVSAREALSFPEVPEHLL  185
                +  +   +E Q +  K+++LA GS ++E+ ++PFD   ++S+ EAL + EVP+HL+
Sbjct  156  ---HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  186  VIGGGYIGLELGSVWLRLGSRVTVVEMLPNILPNTDRQVADTLLRSLKKQGMGFMLGAKV  245
            V+GGGYIGLELG+   ++G++VT++E    IL+ TD  ++ T+ R LK  G+  + +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  246  EGLQKKDGKASVTVNVAGKGEQLSCDRVLVAVGRKSLTDGLGGEEAGIAFDC-GRIRVDD  304
            +G ++ ++  +V V+V GK E + CD  LV++GRK+ T+ +G E+ G+ +D  G I++++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  NFATSVPGIYAIGDLIHGPLLAHKAMMEGEVFAERLAGQASVVDYEFIPGIIYTWPEAAS  364
            +  T++  +YAIGD   G LLAHKA  E+ + AE ++GQ SV+D++ +P +I++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGKTEEQLQAESLSYSVGRFNFMANGRARCMDETEGFVKVLAHKDTGRVLGVHIIGPRAS  424
             G TE + +  +     +RF F AN+RA  + +++GFV+V+A+K+T RVLGV+++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DMIAEGVTVMTYGGTAEDIALTFHAHPTLSEAVKEAALDVEKRAIH  470
             +IAE+V  +  G+ AED++LT+HAHPTL+E++ EAA +V  +A H
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

485) lpdA in NC_012442


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  279 bits (1043),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 177/437 (41%), Positives = 297/437 (68%), Gaps = 7/437 (1%)

Query  1    MLVEKTRLGGTCLNVGCIPSKALIHAADEFHCLTTFAAKSPLGIT-TQNPAIDFARTLEW  59
            +LV+K+ LGG CLN GCIPSKALI A++    +  +   + +G+  + +  +D +  + W
Sbjct  66   VLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKVSGEVQVDMPEVVKW  122

Query  60   KDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAENIVIATGSVP  119
            KDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   ++++A GS+P
Sbjct  123  KDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLP  182

Query  120  VEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSRVMVVEATDR  178
            VE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++V ++E++D 
Sbjct  183  VELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDT  242

Query  179  ILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVKAIEADKILV  237
            IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG    I+ D  LV
Sbjct  243  ILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLV  302

Query  238  TVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPMLAHRAMAQGE  296
            ++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +LAH+A  ++ 
Sbjct  303  SIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAK  362

Query  297  MVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSLDEARKAGHNIQTGLFPFQANGRAMT  356
            + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FPFQAN+RA++
Sbjct  363  IAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALS  422

Query  357  MERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAATIHAHPTLG  416
            +   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ TIHAHPTL 
Sbjct  423  VSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

Query  417  EGFAEASMKALGHALHV  433
            E + EA+   +GHA H+
Sbjct  483  EPLMEAAEGVMGHATHM  499

486) BM28_B0500 in NC_017245


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  279 bits (1043),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 177/437 (41%), Positives = 297/437 (68%), Gaps = 7/437 (1%)

Query  1    MLVEKTRLGGTCLNVGCIPSKALIHAADEFHCLTTFAAKSPLGIT-TQNPAIDFARTLEW  59
            +LV+K+ LGG CLN GCIPSKALI A++    +  +   + +G+  + +  +D +  + W
Sbjct  66   VLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKVSGEVQVDMPEVVKW  122

Query  60   KDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAENIVIATGSVP  119
            KDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   ++++A GS+P
Sbjct  123  KDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLP  182

Query  120  VEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSRVMVVEATDR  178
            VE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++V ++E++D 
Sbjct  183  VELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDT  242

Query  179  ILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVKAIEADKILV  237
            IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG    I+ D  LV
Sbjct  243  ILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLV  302

Query  238  TVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPMLAHRAMAQGE  296
            ++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +LAH+A  ++ 
Sbjct  303  SIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAK  362

Query  297  MVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSLDEARKAGHNIQTGLFPFQANGRAMT  356
            + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FPFQAN+RA++
Sbjct  363  IAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALS  422

Query  357  MERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAATIHAHPTLG  416
            +   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ TIHAHPTL 
Sbjct  423  VSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

Query  417  EGFAEASMKALGHALHV  433
            E + EA+   +GHA H+
Sbjct  483  EPLMEAAEGVMGHATHM  499

487) lpdA in NC_017247


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  279 bits (1043),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 177/437 (41%), Positives = 297/437 (68%), Gaps = 7/437 (1%)

Query  1    MLVEKTRLGGTCLNVGCIPSKALIHAADEFHCLTTFAAKSPLGIT-TQNPAIDFARTLEW  59
            +LV+K+ LGG CLN GCIPSKALI A++    +  +   + +G+  + +  +D +  + W
Sbjct  66   VLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKVSGEVQVDMPEVVKW  122

Query  60   KDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAENIVIATGSVP  119
            KDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   ++++A GS+P
Sbjct  123  KDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLP  182

Query  120  VEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSRVMVVEATDR  178
            VE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++V ++E++D 
Sbjct  183  VELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDT  242

Query  179  ILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVKAIEADKILV  237
            IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG    I+ D  LV
Sbjct  243  ILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLV  302

Query  238  TVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPMLAHRAMAQGE  296
            ++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +LAH+A  ++ 
Sbjct  303  SIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAK  362

Query  297  MVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSLDEARKAGHNIQTGLFPFQANGRAMT  356
            + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FPFQAN+RA++
Sbjct  363  IAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALS  422

Query  357  MERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAATIHAHPTLG  416
            +   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ TIHAHPTL 
Sbjct  423  VSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

Query  417  EGFAEASMKALGHALHV  433
            E + EA+   +GHA H+
Sbjct  483  EPLMEAAEGVMGHATHM  499

488) BMNI_II0492 in NC_017283


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  279 bits (1043),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 177/437 (41%), Positives = 297/437 (68%), Gaps = 7/437 (1%)

Query  1    MLVEKTRLGGTCLNVGCIPSKALIHAADEFHCLTTFAAKSPLGIT-TQNPAIDFARTLEW  59
            +LV+K+ LGG CLN GCIPSKALI A++    +  +   + +G+  + +  +D +  + W
Sbjct  66   VLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKVSGEVQVDMPEVVKW  122

Query  60   KDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAENIVIATGSVP  119
            KDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   ++++A GS+P
Sbjct  123  KDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLP  182

Query  120  VEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSRVMVVEATDR  178
            VE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++V ++E++D 
Sbjct  183  VELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDT  242

Query  179  ILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVKAIEADKILV  237
            IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG    I+ D  LV
Sbjct  243  ILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLV  302

Query  238  TVGRKPQTDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPMLAHRAMAQGE  296
            ++GRKP+T+  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +LAH+A  ++ 
Sbjct  303  SIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAK  362

Query  297  MVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSLDEARKAGHNIQTGLFPFQANGRAMT  356
            + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FPFQAN+RA++
Sbjct  363  IAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALS  422

Query  357  MERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAATIHAHPTLG  416
            +   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ TIHAHPTL 
Sbjct  423  VSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

Query  417  EGFAEASMKALGHALHV  433
            E + EA+   +GHA H+
Sbjct  483  EPLMEAAEGVMGHATHM  499

489) lpd in NC_015677


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  278 bits (1041),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 184/449 (41%), Positives = 299/449 (67%), Gaps = 8/449 (1%)

Query  20   AALRAAQLGIATTLVEGDRLGGTCLNIGCIPSKALIHVAEEFDSARRSAAGG-RIGIQLQ  78
            AA+RAAQLG    LV+   LGG CLN GCIPSKALI  +E     +++ + G +++ ++Q
Sbjct  54   AAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQ  113

Query  79   PPRLDLGQTHRWKDSVVARLTGGVGALLKKAGVQVVRGWARLEDGKTATVEVPDEEPLRI  138
               +D+ +  +WKD++V +LT+G+ +LLK  GV+V+ G A L ++  A + + DEE + +
Sbjct  114  ---VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI-F  169

Query  139  RCEHLLLATGSVPVALPQLPFGGP-VLSSTEALALPEVPRHLVVVGAGYIGLELGMAWRK  197
               +L+LA GS+PV L  +PF+   ++SSTEAL L EVP HLVVVG+GYIGLELG A  K
Sbjct  170  SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAK  229

Query  198  LGAEVAIVEVADRVLPTYDEALGQVLQASLRRMGVTLHLGCKAEGLAQDGRALRVR-SAQ  256
            +GA V+I+E +D +L+  D  L + ++  L+ +G+T+  +   +G  + G  + V+   +
Sbjct  230  FGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVD  289

Query  257  ADEFVLPADRVLAAVGRRPRAEGFGLESLRLDMAGRA-VRVDAQCRTSMRNVWAIGDLTG  315
            + E ++  D  L ++GR+P +  +GLE++ + + +++ ++++ +C+T++ +V AIGD +G
Sbjct  290  GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAG  349

Query  316  EPMLAHRAMAQGEVVAEAIAGHKRRFEPLAIPAVCFTDPEVVAVGRTAAQAAEAGIETLS  375
              +LAH+A  ++ + AE I+G++  ++  A+P V F+DPEV   G T  +A E G ET+S
Sbjct  350  GDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVS  409

Query  376  ATFPFAANGRSLSMEGGEGFVRVLARRDNHMVLGWQAVGRGVSELAAAFSYAIEMGARLE  435
            + FPF AN+R+LS+ +++GFV+V+A ++   VLG Q VG  VS L A   +AIE GA  E
Sbjct  410  SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAE  469

Query  436  DVAGIVHAHPTLGEAVQEAALRALGRALH  464
            D++  +HAHPTL E++ EAA   +G+A H
Sbjct  470  DLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

490) TM1040_2775 in NC_008044


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  278 bits (1040),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 200/466 (43%), Positives = 306/466 (66%), Gaps = 17/466 (3%)

Query  3    DIKR--KVLVIGAGPGGYVCAIRAGQLGLDTVIVDEARPGGTCLNIGCIPSKAMIHAADE  60
            ++K+   +LVIGAG+GGYV AIRA+QLG   V+VD A  GG CLN GCIPSKA+I A++ 
Sbjct  35   EVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER  94

Query  61   FYKMTHAGAGPLGISAAGPTIDLEQTVAWKDGIVERLTGGVGGLLRKAGVKMISGRARFV  120
               + HA +  L +S+    +D+ + V WKDGIV++LT+G+  LL+  GV +ISG A + 
Sbjct  95   VKHIKHANTMGLKVSGEVQ-VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  121  DGKTVTVAGDEGEIQIRADYIVIATGSAPVELPFLPFGGA-VMSSTEALSLTEVPESLAV  179
            ++    +  ++ E  +    +++A GS PVEL  +PF+   ++SSTEAL L EVP+ L V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  180  VGGGYIGLELGTVFAKLGSKVTVVEAEDRILPLYDKALTRPVHKRLEELGVTVMTGTKAQ  239
            VGGGYIGLELGT +AK+G+KVT++E+ D IL+  D  LT+ V ++L E+G+TV+T++  Q
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  240  SHEGGA------LQTDAGE--IAAERVLVTVGRRPRTQGIGIDELSLTMNGP-FIRIDKV  290
            + E  +      +Q D+ E  I  +  LV++GR+P T  IG++++++ +++  FI+I++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  291  CQTSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEYLAGQAVEWDKRAIPAVCFTDPEIVTC  350
            CQT++  +YAIGD +G  +LAH+A  ++ + AE ++GQ    D +A+P V F+DPE+   
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  351  GVLPGEVE----GTKSAEFPFVANGRAMTTERDEGFIRVVWREADNAVLGLQGVGVGISE  406
            G+   E       T S+ FPF AN+RA++    +GF++VV     + VLG+Q VG  +S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  407  LSSAFSLAIEMGACLEDIAATIHAHPTQSEGLQEACLKALGHALHI  452
            L +   +AIE GA  ED++ TIHAHPT +E L EA    +GHA H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

491) Ppro_1030 in NC_008609


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  278 bits (1041),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 187/465 (41%), Positives = 317/465 (69%), Gaps = 8/465 (1%)

Query  7    DLVVLGAGPGGYVAAIRASQLGMKVAVVEPRPTMGGACLNEGCIPSKALLDSSEHFSMAR  66
            DL+V+GAG+GGYVAAIRA+QLG KV +V+ ++ +GG CLN GCIPSKAL+ +SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   DKFASHGVIVNPP-KLDVAVMQARKADVVKKLTDGVAYLFKKNKVQVICGTGRIVRPVAG  125
            +   + G+ V+   ++D++ +  +K ++V+KLTDG+  L+K N V+VI G + +      
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT-----  153

Query  126  EPHCVEVTATGATQTVKARKVLLATGGVPVEVPTLPFDGTLIVSSKDALEFCSVPEHLIV  185
            E+H   +   +  Q    + ++LA G++PVE+ ++PFD   I+SS +AL++  VP+HL+V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  186  VGAGYIGLELGSVWRRLGARVTVVEMMPKMLPFTDSEVTDALMKILKKQGVEFRMATSVT  245
            VG+GYIGLELG+   ++GA+VT++E    +L+ TD+ +T ++ + LK  G+     + V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  246  KVEKVGDKARVSLTAGGKTELVECDKILVAIGRKPVTAGLGLEDAGVAVNDKGRVEVDEN  305
              E+ GD   V +  +GK E+++CD  LV+IGRKP T+ +GLE+ GV ++D+G + ++++
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  306  YETSVAGIYAIGDLIPGPLLAHKASEEAVAFAERLTGMKSQVHYETIPGIAYTWPEAASV  365
             +T++  +YAIGD   G LLAHKAS EA   AE ++G +S ++++++P + ++ PE A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  366  GKTEQALKEEQIPYAVGKFNFMGNGRARAMDETEGFVKILAHKENDKVLGIHIVGPRASD  425
            G TE+  KE       ++F F +N+RA ++ +++GFV+++A+K+  +VLG+++VGP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  426  MIAEGVAVMVYGGTSHDIAAMFHAHPTLAEAIKEAALDVHKSAIH  470
            +IAE+V  +  G+ ++D++  +HAHPTL+E++ EAA +V   A H
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

492) Dgeo_0353 in NC_008025


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  277 bits (1036),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 202/466 (44%), Positives = 317/466 (69%), Gaps = 9/466 (1%)

Query  5    DVLVIGGGPAGYVAAIRAAQLGFKTACVDAFTRNGKASLGGTCLNVGCIPSKALLDSSER  64
            D+LVIG+G++GYVAAIRAAQLG K   VD      KA LGG CLN GCIPSKAL+ +SER
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD------KAELGGVCLNRGCIPSKALISASER  94

Query  65   FEMIKHEAGEHGIQVDGAT-VDVAKMLGRKESVVDKLTGGIAYLFKKNKVTSIHGLGRLV  123
               IKH A   G++V G   VD++ ++ +K+++V+KLT+GI  L+K N V  I G + L 
Sbjct  95   VKHIKH-ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  124  RREGDSWIVDAAGTEVRAKNVIVATGSTPRQLPGVPFGGN-IVDNEGALAFTQVPAQLGV  182
              +     ++        K++I+A GS P +L ++PF+ + I+ +  AL + +VP +L V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  183  IGAGVIGVELGSVWRRLGAQVTILEALPGFLMAADDAVSKEALKQFQKQGLDFHFGVKIT  242
            +G+G IG+ELG+   ++GA+VTILE+   +L ++D  ++K   ++++  G+    +  + 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  243  EVKQDDSGVTVTYEEQGQPVTARFDKLIVSIGRVPNTQGLGAQEVGLQLDERGFVKVDHH  302
               + +  V V  + +G+    + D  +VSIGR PNT  +G +++G+ LD++GF+K+++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FRTNLPGVYAIGDVIGGPMLAHKaeeegvavaellagQAGHVNYAVVPWVIYTSPEIAWA  362
             +TN+  VYAIGD  GG +LAHKA  E+   AE+++GQ + +++  +P VI++ PE+A +
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GLTEKQAKEQGHKVKTGQFPFSANGRALGHGDPRGFVKVVADADTDRILGVHMVGPNVSE  422
            GLTEK+AKE+G    +++FPF AN+RAL+ +D+ GFV+VVA+ +T R+LGV+MVGP+VS 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  LIGETVALMEFGASAEDLARTVHAHPTLSEVVKEAALATDKRALHM  468
            LI+E+V  +E GA+AEDL+ T+HAHPTL+E + EAA +   +A HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

493) lpdA2 in NC_014225


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  276 bits (1031),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 195/452 (44%), Positives = 314/452 (70%), Gaps = 9/452 (1%)

Query  3    DLIVIGSGPAGYVAAIRASQLGLSVAIVEKYSTFGGTCLNVGCIPSKALLQSSEHFAFIE  62
            DL+VIG+G++GYVAAIRA+QLG  V +V+K + +GG CLN GCIPSKAL+ +SE+   I 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  63   KHADEHGIQLK-NATVDFSKMMKRKEEVVASLVGGIEGLLKRNKVKTVQGSARFVSPE--  119
            KHA+  G+++  +  VD + ++K+K+ +V  L +GI  LLK N V  + G A +  ++  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  120  --EIEVNGKKMRAKHFLIATGSKPIELPFLPFDEKVVVSSTGALSLPSVPKKMVVVGAGV  177
               IE + +    K++++A GS P+EL  +PFD+K ++SST AL L  VP+ +VVVG+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  178  IGVELASVYSRLGSEVAIVEMLDRITPAMDNQIGKTFQKILSAQGLTFHLGAQVTDAKVS  237
            IG+EL++ Y+++G+ V+I+E  D I ++ D  + KT ++ L   G+T   +A V ++  +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  238  KKGAELSVRIKGKESTLKADVVLVAIGRKPYSEGLGVEEIGIAKTKQGFIVVDGNFC-TN  296
                ++ V++ GKE  ++ D  LV+IGRKP +  +G+E+IG+    QGFI ++ + C TN
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK-CQTN  337

Query  297  HPNILAVGDIIDGPMLAHRaseeavaavesLAGKSSHINYMAIPNVIYTMPEVAAVGLTE  356
              ++ A+GD  +G +LAH+AS EA  A E ++G++S I++ A+P VI++ PEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  357  EEGKEMGLELITGVFPFKGNARARCAGETEGIVKVIGEKNSGRLLGVHLVGANASEMIGE  416
             E+KE G E +++ FPF++NARA   ++++G+V+V++EKN+ R+LGV++VG++ S +I+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  417  GVVAIEKRATVRELAYTSHAHPTLSEAIKEAA  448
            +V AIE  A   +L+ T HAHPTL+E++ EAA
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

494) Mnod_7193 in NC_011894


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  276 bits (1032),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 197/467 (43%), Positives = 320/467 (69%), Gaps = 5/467 (1%)

Query  153  EVLVLGAGPGGYTAAFRAADLGKSVVLVERWASLGGVCLNVGCIPSKALLHAAKVIDESH  212
            ++LV+GAG+GGY AA+RAA+LGK VVLV++ A LGGVCLN GCIPSKAL+ A+  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  213  AMAAHGISFSSPA-IDVDKLRGWKDGVVKRLTGGLGGLAKQRKVTVVTGTGRFVSPHQVA  271
               + G+  S+   +D+  +  WKDG+V++LT+G+  L K   V V++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  272  VEHEGRTRIIGFEQAIIAAGSEPIQMPFIPHDDKRVIDSTGALELDGIPKRLLVigggii  331
            +  E+  +I+++ + I+A GS P+++  +P D+KR+I ST AL+L+ +P++L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  332  gLEMATVYHALGAKVTIVELMDQIIPGADKDIITPLMKRISKQYE-AIHLKTKVTGVEAL  390
            GLE++T Y  +GAKVTI+E  D I++G+D  I+T  +KR  K+   ++   + V G E  
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTD-PILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  391  PEGLKVSFEGGSAPATDTFDKVLVSVGRRPNGKLIAAEAAGVIVDERGFIPVDKQMRTNV  450
             + ++V  + ++       D  LVS+GR+PN   I+ E  GV++D++GFI ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  451  PHIFAIGDVVGQPMLAHKATHEGKVAAETAAGKNAFFDAKVIPSVAYTDPEVAWVGLTEN  510
             H++AIGD  G  +LAHKA+ E+K+AAE  +G+N+ +D + +P V ++DPEVA  GLTE+
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  511  EakakgikvgkgvFPWAASGRSLSLGRDEGLTKVLFDEASDRILGCGIVGPSAGDLIAEA  570
            EAK KG     + FP  A++R+LS++  +G+ +V+ +  + R+LG  +VGP  + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  571  ALAIEMGADASDIGLTIHPHPTLSETIGMAAEAFEGTITDLYMPKRP  617
             +AIE GA+A D++LTIH+HPTL+E +  AAE+  G  T++ + K+ 
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

495) Belba_1343 in NC_018010


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1030),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 191/453 (43%), Positives = 318/453 (71%), Gaps = 7/453 (1%)

Query  3    DVIVIGSGPGGYVAAIRAAQLGMKTAIIEKYPTLGGTCLNVGCIPSKALLDSSEHYHNAA  62
            D++VIG+G+GGYVAAIRAAQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  63   HTFKTHGINLSS-LKVDLKQMIARKDDVVKQNVDGIDYLMKKNKIDVHQGLGSFvdkttv  121
            H+ +T G+++S+ ++VD+ +++ +KD++V++  DGI  L+K N ++V  G  +++  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  122  kvtkddGSSENIQGKNIIIATGSKPASLPFIKLDKDRVITSTEALKMKEIPKHLIVIGGG  181
               K ++  + +  K++I+A GS P  L  + +D+ R+I+STEAL+++E+P+HL+V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  182  VIGMELGSVYGRMGAKVSVVEYMDSLIPTMDRTMGKELQKSLKKLGFEFFLKHKVVAVES  241
             IG+ELG+ Y++ GAKV+++E  D++++  D  + K +++ LK +G+  +    V + E+
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  242  KGKEVTVKAE-NSKGETVELKGDYVLVSIGRKPYTEGLNAEAAGVKITDRGQVEVDNHLR  300
             G EV V  + ++K E ++   DY LVSIGRKP T  +  E  GV + D+G + ++N  +
Sbjct  278  TGDEVNVHVQVDGKEEIIQ--CDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  301  TNVPNIYAIGDVVKGAMLAHKAEEEGTFVAEVIAGQKPHINYLLIPGVVYTWPEVAAVGY  360
            TN+ ++YAIGD   G +LAHKA  E+ + AEVI+GQ++ I++  +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  361  TEEQLKEKGIKYKAGKFPFMASGRARASMDTDGLVKVLADAETDEILGVHMIGPRTADMI  420
            TE + KEKG    +++FPF A++RA +  D+DG+V+V+A+ +T  +LGV+M+GP  + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  421  AEAVVAMEFRASAEDIARMSHAHPTYTEAFKEA  453
            AEAV A+E  A+AED++   HAHPT  E++ EA
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

496) M446_1241 in NC_010511


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1030),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 200/477 (42%), Positives = 321/477 (68%), Gaps = 25/477 (5%)

Query  133  EVLVLGAGPGGYTAAFRAADLGKKVVLVERWASLGGVCLNVGCIPSKALLHAAKVIDESH  192
            ++LV+GAG+GGY AA+RAA+LGKKVVLV++ A LGGVCLN GCIPSKAL+ A+  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  193  GMAAHGISFASP-QIDIDKLRGWKDGVVKRLTGGLGGLAKQRKVTVVTGTARFVSPHQIA  251
               + G+  ++  Q+D+  +  WKDG+V++LT+G+  L K   V V++G A +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  252  VEHEGQTRVIGFEQAIIAAGSEPVKLPFIPHDDPRVIDSTGALELDGIPQRLLVigggii  311
            +  E++ +++++ + I+A GS PV L  +P D+ R+I ST AL+L+ +P++L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  312  gLEMATVYHALGSKVTIVELMDQIIPGADKDIVTPLMKRISKQYEAIHLKAKVTAV--EA  369
            GLE++T Y  +G+KVTI+E  D I++G+D     P++ +  K+    HLK    +V  +A
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTD-----PILTKTVKR----HLKEIGITVITDA  270

Query  370  LPEG---------LKVSFEGGSAPAHDTFDKILVAVGRRPNGKLIGAEAAGVIVDERGFV  420
            L +G         + V  +G     +  +   LV++GR+PN   IG E  GV++D++GF+
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  421  PADKQMRTNVPHIFAIGDVVGQPMLAHKATHEGKVAAETAAGKNSFFDAKVIPSVAYTDP  480
              +++ +TN+ H++AIGD  G  +LAHKA+ E+K+AAE  +G+NS +D + +P V ++DP
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  481  EVAWVGLTENEakakglkvgkgvFPWAASGRSLSLGRDEGLTKVLFDEATDRIVGCGIVG  540
            EVA  GLTE+EAK KG     + FP  A++R+LS++  +G+ +V+ +  T R++G  +VG
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  541  PSAGDLIAEAALAIEMGADASDIGLTIHPHPTLSETVGMAAEAFEGSITDLYMPKKK  597
            P  + LIAEA +AIE GA+A D++LTIH+HPTL+E +  AAE+  G  T++ + KK+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

497) PSF113_2343 in NC_016830


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1028),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 188/449 (42%), Positives = 299/449 (67%), Gaps = 11/449 (2%)

Query  8    LLIIGGGPGGYVAAIRAGQLGIETILVEGQALGGTCLNIGCIPSKALIHVAEQFHQTLHH  67
            LL+IG+G+GGYVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+     H 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK---HI  98

Query  68   SQGSALGITVATPT-LEIGKSVEWKNGIVDRLTTGVAALLKKHKVQVIHGWAKVIDGK--  124
             +++++G+ V+    +++   V WK+GIV++LT G+ +LLK + V+VI G A + ++   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  125  --TVEVGDTRIQCDHLLLATGSKSVDLPMLPIGG-PIISSTEALAPTSVPKHLVVVGGGY  181
               +E  +  +   +L+LA GS +V+L  +P++   IISSTEAL    VP+HLVVVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  182  IGLELGIAYRKLGAEVSVVEAQERILPAYDGELTQPVHEALKQLGVKLYLKHSVEGFDAQ  241
            IGLELG AY K+GA V+++E+ + IL++ D  LT+ V   LK++G+ +     V+G +  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  242  ASTLQVR-DPNGETLNLDTDRVLVAVGRKPNTQGWNLEALDLAMNGSAL-KIDSRCQTSM  299
            +  ++V+ + +G    ++ D  LV++GRKPNT    LE +++ +++ ++ KI+++CQT++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  300  RNVWAIGDLSGEPMLAHRAMAQGEMVAELIAGQHREFNPTAIAAVCFTDPELVVVGKTPD  359
             +V AIGD +G  +LAH+A  ++ + AE+I+GQ+  ++  A++ V F+DPE+   G T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  360  EAKAAGLDCMVSSFPFAANGRAMTLESKSGFVRVVARRDNHLIVGWQAVGVGVSELSTAF  419
            EAK  G + + S FPF AN+RA+++    GFV+VVA ++   ++G Q VG  VS L +  
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  420  GQSLEMGARLEDIAGTIHAHPTLGEAVQE  448
              ++E GA  ED++ TIHAHPTL E++ E
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLME  487

498) lpdA in NC_002927


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1028),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 189/468 (41%), Positives = 314/468 (68%), Gaps = 11/468 (2%)

Query  8    DLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEAR  67
            DLLV+G+G+GGY AA+RAA+LG  VVLV+ ++ LGGVCLN GCIPSKAL+  +  + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   AMSELGIEFS-EPRIRLDKLRAHKEALVAKLCGGLGGLARQRKVQVVTGTGRFDGPH--S  124
              + +G+  S E ++ +  +   K+++V KL +G+  L +   V+V++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  LAVSDGSRV-AFKQAVIAVGSRPVRLPFLP-DDPRIMDSTGALELKEIPRRLLVIGGGVI  182
            + + D  ++ ++K+ ++A+GS PV L  +P D+ RI+ ST AL+L+E+P +L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  183  GMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVAGRYEAVLLGTRVSAAQARD  242
            G+EL+T YA +GA+VT++E +D +L+G D  L K + +++     +V+ ++ V +++  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  D--GIHVGFEGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGVRVDEGGFIRVDAQQRTN  300
            D   +HV  +G +      Y   LV+ GR+PN + I+ E  GV +D+ GFI+++ + +TN
Sbjct  280  DEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  301  VGHIYAIGDVVGEPMLAHKAAHEGKVAAETAAGMRVANDARVIPAVAYTDPEVAWVGLTE  360
            + H+YAIGD  G  +LAHKA+ E+K+AAE  +G     D + +P V ++DPEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  361  TAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPATHALLGVGMVGPQAGDLIAE  420
              A+  G     + FP  A++RALS++ ++G+ +++ +  T  +LGV MVGP+ + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  421  AALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKK  468
            A +AIE GA++ D++LTIH+HPTL+E L  AAE+  G  T++ L +K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

499) FAES_1864 in NC_020054


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1027),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 190/453 (42%), Positives = 316/453 (70%), Gaps = 6/453 (1%)

Query  5    DVIVIGSGPGGYTGAIRCAQLGLKTAIIEKYNALGGTCLNVGCIPSKALLDSSEHFYNAS  64
            D++VIG+G+GGY +AIR AQLG K  +++K   LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HTFAEHGIKLD-QLAVDLPQMIKRKQDVVDQTTKGIAFLMKKNKIDTYYGMGSFVDANTV  123
            H+    G+K+  ++ VD+P+++K+K+++V++ T GI  L+K N ++   G + + +A+  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  KIVKSDGSGEETISGKNIVIATGSKPLSFPSMPIDKQRVITSTEALKLPEIPKHLIIIGA  183
            KI   D   E+ +S K++++A GS P+ + SMP+D++R+I+STEAL+L E+P+HL+++G+
Sbjct  159  KIKIEDE--EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  184  GVIGAELGSVYARIGAKVSFVEFADSMIPTMDKTMGKELQKAVKKLGADFYFNHKVTKVE  243
            G IG ELG+ YA++GAKV+++E +D++++  D  + K +++ +K +G     +  V   E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  244  NTGNEVVVSVDTPKGEQITLTGDYCLVSVGRRPYTDGLNLEAAGLATDQRGKVEVDDHLR  303
            NTG+EV V V+    E+I +  DYCLVS+GR+P T+ + LE  G+  D++G + +++  +
Sbjct  277  NTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TKVPHIYALGDVIRGAMLAHKAEEEGVFIAETIAGQKPHINYVLIPNVVYTWPEVAAVGY  363
            T++ H+YA+GD   G +LAHKA  E+ + AE I+GQ++ I++  +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKTKAVPYKLGTFPFKALGRARASMDIDGLVKVLAHKETDEILGVHIIGPRAADMI  423
            TE E K K+     + FPF+A +RA +  D DG+V+V+A+K+T  +LGV+++GP  + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  GEAVVAMEYRASAEDISRMSHAHPTYTEAFKEA  456
            +EAV A+E  A+AED+S   HAHPT  E++ EA
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

500) lpdA in NC_019382


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1027),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 188/468 (41%), Positives = 314/468 (68%), Gaps = 11/468 (2%)

Query  8    DLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEAR  67
            DLLV+G+G+GGY AA+RAA+LG  VVLV+ ++ LGGVCLN GCIPSKAL+  +  + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   AMSELGIEFS-EPRIRLDKLRAHKEALVAKLCGGLGGLARQRKVQVVTGTGRFDGPH--S  124
              + +G+  S E ++ +  +   K+++V KL +G+  L +   V+V++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  LAVSDGSRV-AFRQAVIAVGSRPVRLPFLP-DDPRIMDSTGALELKEIPRRLLVIGGGVI  182
            + + D  ++ ++++ ++A+GS PV L  +P D+ RI+ ST AL+L+E+P +L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  183  GMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVAGRYEAVLLGTRVSAAQARD  242
            G+EL+T YA +GA+VT++E +D +L+G D  L K + +++     +V+ ++ V +++  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  D--GIHVGFEGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGVRVDEGGFIRVDAQQRTN  300
            D   +HV  +G +      Y   LV+ GR+PN + I+ E  GV +D+ GFI+++ + +TN
Sbjct  280  DEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  301  VGHIYAIGDVVGEPMLAHKAAHEGKVAAETAAGMRVANDARVIPAVAYTDPEVAWVGLTE  360
            + H+YAIGD  G  +LAHKA+ E+K+AAE  +G     D + +P V ++DPEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  361  TAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPATHALLGVGMVGPQAGDLIAE  420
              A+  G     + FP  A++RALS++ ++G+ +++ +  T  +LGV MVGP+ + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  421  AALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKK  468
            A +AIE GA++ D++LTIH+HPTL+E L  AAE+  G  T++ L +K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

501) lpdA in NC_017223


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1027),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 190/468 (41%), Positives = 313/468 (67%), Gaps = 11/468 (2%)

Query  8    DLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEAR  67
            DLLV+G+G+GGY AA+RAA+LG  VVLV+ ++ LGGVCLN GCIPSKAL+  +  + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   AMSELGIEFS-EPRIRLDKLRAHKEALVAKLCGGLGGLARQRKVEVVTGTGRFDGPH--S  124
              + +G+  S E ++ +  +   K+++V KL +G+  L +   VEV++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  LAVSDGSRV-AFKQAVIAVGSRPVRLPFLP-DDPRIMDSTGALELKEIPRRLLVIGGGVI  182
            + + D  ++ ++K+ ++A+GS PV L  +P D+ RI+ ST AL+L+E+P +L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  183  GMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVASRYEAVLLGTRVSAAQARD  242
            G+EL+T YA +GA+VT++E +D +L+G D  L K + +++     +V+ ++ V +++  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  D--GIHVSFDGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGARVDEGGFIRVDAQQRTN  300
            D   +HV  DG +      Y   LV+ GR+PN + I+ E  G  +D+ GFI+++ + +TN
Sbjct  280  DEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  301  VGHIYAIGDVVGEPMLAHKAAHEGKVAAETAAGMRVANDARVIPAVAYTDPEVAWVGLTE  360
            + H+YAIGD  G  +LAHKA+ E+K+AAE  +G     D + +P V ++DPEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  361  TAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPATHALLGVGMVGPQAGDLIAE  420
              A+  G     + FP  A++RALS++ ++G+ +++ +  T  +LGV MVGP+ + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  421  AALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKK  468
            A +AIE GA++ D++LTIH+HPTL+E L  AAE+  G  T++ L +K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

502) lpdA in NC_002929


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  275 bits (1027),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 190/468 (41%), Positives = 313/468 (67%), Gaps = 11/468 (2%)

Query  8    DLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEAR  67
            DLLV+G+G+GGY AA+RAA+LG  VVLV+ ++ LGGVCLN GCIPSKAL+  +  + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   AMSELGIEFS-EPRIRLDKLRAHKEALVAKLCGGLGGLARQRKVEVVTGTGRFDGPH--S  124
              + +G+  S E ++ +  +   K+++V KL +G+  L +   VEV++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  LAVSDGSRV-AFKQAVIAVGSRPVRLPFLP-DDPRIMDSTGALELKEIPRRLLVIGGGVI  182
            + + D  ++ ++K+ ++A+GS PV L  +P D+ RI+ ST AL+L+E+P +L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  183  GMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVASRYEAVLLGTRVSAAQARD  242
            G+EL+T YA +GA+VT++E +D +L+G D  L K + +++     +V+ ++ V +++  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  D--GIHVSFDGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGARVDEGGFIRVDAQQRTN  300
            D   +HV  DG +      Y   LV+ GR+PN + I+ E  G  +D+ GFI+++ + +TN
Sbjct  280  DEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  301  VGHIYAIGDVVGEPMLAHKAAHEGKVAAETAAGMRVANDARVIPAVAYTDPEVAWVGLTE  360
            + H+YAIGD  G  +LAHKA+ E+K+AAE  +G     D + +P V ++DPEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  361  TAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPATHALLGVGMVGPQAGDLIAE  420
              A+  G     + FP  A++RALS++ ++G+ +++ +  T  +LGV MVGP+ + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  421  AALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKK  468
            A +AIE GA++ D++LTIH+HPTL+E L  AAE+  G  T++ L +K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

503) Deipe_0915 in NC_019793


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1024),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 195/464 (43%), Positives = 318/464 (69%), Gaps = 9/464 (1%)

Query  1    MIVIGGGPAGYVAAIRAAQLGFKTACVDAFERGGKASLGGTCLNVGCIPSKAMLDSSERF  60
            ++VIG+G++GYVAAIRAAQLG K   VD      KA LGG CLN GCIPSKA++ +SER 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVD------KAELGGVCLNRGCIPSKALISASERV  95

Query  61   EMVQHELVDHGILVEGA-SLDLGKMLARKDAVVDKMSGGIAYLFKKNKVTSLHGLGRLVR  119
              ++H     G+ V G   +D+  ++ +KD++V+K+++GI  L+K N V  + G + L  
Sbjct  96   KHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  120  QDQggwvvgvgEQEFAAKHVIIATGSSPRELPLAPFGG-HVMDNAGALALDRVPGKLGVI  178
             + +   +   EQ F+ K++I+A GS P EL   PF+  +++ ++ AL L+ VP  L V+
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  179  GAGVIGVELGSVWRRLGAQVTVLEALPGFLQAADPAVAREALKQLQKQGLEFHFGVKIAR  238
            G+G IG+ELG+   ++GA+VT+LE+   +L ++DP +++   ++L+  G+    +  +  
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  239  IEQTEAGVSVTYAEGDQEVTAQFDKLIVAIGRVPNTQGLGAQDVGLELDERGFIKADSHY  298
             E+T   V+V    +++E   Q D  +V+IGR PNT  +G +++G+ LD++GFIK ++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  299  RTNLPNVYAIGDVIGGAMLAHKaeeegvavaellagQAGHVNYNVIPWVIYTSPEIAWAG  358
            +TN+ +VYAIGD  GG +LAHKA  E+   AE+++GQ + ++++ +P VI++ PE+A +G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  359  LTEAQAKEQGYDIKSGQFPFSANGRAAGHNDTRGFVKVVADAKTDRILGVHMIGPNVSEL  418
            LTE +AKE+GY+  S++FPF AN+RA + +D+ GFV+VVA+ +T R+LGV+M+GP+VS L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  419  IGETVAVMEFAGSSEDLARIVHAHPTLSEVVKEAALGVEKRTIH  462
            I+E+V  +E ++++EDL+  +HAHPTL+E + EAA GV  ++ H
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

504) Deipe_1175 in NC_019793


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1024),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 195/474 (42%), Positives = 338/474 (72%), Gaps = 9/474 (1%)

Query  1    MTQNSVDY-DLLVIGAGPGGYHAAIRAAQLGLKVACAEMgnvggvclnvgcIPTKALLHA  59
            MT +   Y DLLVIGAG+GGY AAIRAAQLG KV   + +++GGVCLN GCIP+KAL+ A
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISA  91

Query  60   GEGIRGAKHAEDFGLTF-GEPKMDIAKLNGWKDGIVKRLTGGVSALFKANKVTHLVGEAR  118
            +E ++  KHA+  GL   GE ++D++ +  WKDGIV++LT+G+ +L+K+N V  + GEA 
Sbjct  92   SERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  119  FLDAHTVQV----GGQKVTARSFIIATGSEPANLPPFPVDQQKIVDSTGALMVPDPLPKR  174
            + +AH  ++      Q  + + +I+A GS P +L + P DQ++I+ ST AL + + +P++
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNH  210

Query  175  FLAIGAGAIGLEFAQVYHNLGSSVKVIEFapqvvpaadadaaNTFAKILRKQGIAIDLGT  234
            ++ +G+G IGLE++  Y ++G+ V ++E +  +++++D+  ++T  + L+  GI++  ++
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  235  KANGFTERDGELHVELEDVTTGEKRVEVYDRVLVAVGRRPRSANLGLEVAGVQVNERGFI  294
              +G  + ++E++V+++    G   +   D  LV++GR+P ++++GLE  GV ++++GFI
Sbjct  271  LVQGGENTGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  295  GVNKKMQTSTPHIYAIGDVVGNPMLAHKAMKEGLVAAEVIAGKKSEMDVVAIPAVVYTTP  354
             +N+K QT+  H+YAIGD  G  +LAHKA  E+ +AAEVI+G++S +D  A+P V+++ P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  355  ELAWVGLTEAEAKAKGYTVKTGNFPLSASGRAMTLGDTDGFVKMISDAKTDLVLGAHIVA  414
            E+A  GLTE EAK KGY   ++ FP+ A++RA++++D+DGFV+++++ +T  VLG ++V+
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  415  PHASDFLSEVGLALEMAATVTDISLTVHAHPTLSESVLEAAENIHKQAIHIMNR  468
            P+ S +++E  +A+E +A   D+SLT+HAHPTL+E+++EAAE +  +A H++N+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

505) lpdA in NC_011297


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1024),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 191/464 (42%), Positives = 320/464 (69%), Gaps = 6/464 (1%)

Query  5    DVIFLGAGSGGYVGAIRAADLGKKVCIIEARELGGTCLNRGCIPTKALLKSAEVFHTVKD  64
            D++ +GAGSGGYV+AIRAA+LGKKV +++  ELGG CLNRGCIP+KAL+ ++E    +K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   AKTFGINVDA-YSFDVNGIYSWKENVVKKLVSGVEYLLKSRKVVIKKGRGRIIDNETIEV  123
            A+T G++V +    D+  +  WK+ +V+KL  G+  LLK+  V +  G + + + +   +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  124  ETPEGKEIVQGDNIVIATGSEPAMIPTFKIDGKNVLTSDDALNLREIPKDiviigagaig  183
               +  +I    ++++A GS P  + +  +D K +++S +AL+L+E+P+++V++G+G IG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  184  iEFATFYSTFGTKVTIVEMMPQVVPTLKDKKVASYLQRILNKKGIEVKVGAKIESVEVKD  243
            +E++T Y+ FG+KVTI+E    +++   D  ++  ++R L+  GI V  +A +++ E  +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSG-TDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  GKVYSTL---STGEVLESEKVLVSIGRKLNSDNIGLENIGVNVD-RGRIVVDEYLRTNVK  299
            + V   +   +  E+++ +  LVSIGRK N+++IGLENIGV +D +G I +++  +TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  300  NVYAIGDVIGGLLLAHKAMKEGEVVAEIIAGENKKMDYRVVPWAIFSSPEIAACGLTEEE  359
            +VYAIGD  GG LLAHKA  E+ + AE+I+G+N  +D++ +P  IFS PE+A  GLTE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  360  AKEQGIEVVTGEFPFSANGKAVSMNATDGFVKVVAKKEDKVIIGAQIIGPEASVMIAELA  419
            AKE+G E V++ FPF AN++A+S++ +DGFV+VVA K+ K ++G Q++GPE S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  420  LAIQNNLTLDDVADTVHTHPTLPEAVMEAVKVPLGSVVHIYLRR  463
            +AI+     +D++ T+H+HPTLPE++MEA    +G   H+  ++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKK  503

506) bkdC in NC_004129


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1024),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 187/450 (42%), Positives = 302/450 (68%), Gaps = 9/450 (2%)

Query  8    QLLIIGGGPGGYVAAIRAGQLGISTILVEGQSLGGTCLNIGCIPSKALIHVAEQFHQTRH  67
            +LL+IG+G+GGYVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+    +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKH  97

Query  68   HSQGSALGIEVAAPT-LNIGKSVEWKDGIVDRLTTGVAALLKKNKVQVIQGWARVIDGK-  125
              +++++G+ V++   +++   V WKDGIV++LT G+ +LLK N V+VI G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  126  -TVEIEGADTRIQCEHLLLATGSKSVNLPMLPIGG-PIISSTEALAPKTLPKRLTVVGGG  183
              + IE+ +  +   +L+LA GS +V+L  +P++   IISSTEAL  + +P++L VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  YIGLELGIAYRKLGVEVSVVEAQERILPAYDGELTQPVLDSVKQLGIKLYLKHSVLGFDA  243
            YIGLELG AY K+G  V+++E+ + IL++ D  LT+ V   +K++GI +     V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  ASSSLQVR-EPNGDTLNLATDQVLVAVGRKPNTQGWNLESLNLDMNGAA-IKIDHRCQTS  301
            ++  ++V+ + +G    +  D  LV++GRKPNT    LE++ + +++ + IKI+++CQT+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  302  MRNVWAIGDLSGEPMLAHRAMAQGEMVAELIAGKHREFNPAAIPAVCFTDPELVVVGKTP  361
            + +V AIGD +G  +LAH+A  ++ + AE+I+G++  ++  A+P V F+DPE+   G T 
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  362  DEARAAGLDCIVSSFPFAANGRAMTLESKNGFVRVVARSDNHLIVGWQAVGVGVSELSTA  421
             EA+  G + + S FPF AN+RA+++   +GFV+VVA  +   ++G Q VG  VS L + 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  422  FGQSLEMGARLEDIGGTIHAHPTLGEAVQE  451
               ++E GA  ED++ TIHAHPTL E++ E
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLME  487

507) lpdA in NC_018829


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1024),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 190/468 (41%), Positives = 313/468 (67%), Gaps = 11/468 (2%)

Query  8    DLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEAR  67
            DLLV+G+G+GGY AA+RAA+LG  VVLV+ ++ LGGVCLN GCIPSKAL+  +  + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   AMSELGIEFS-EPRIRLDKLRAHKEALVAKLCGGLGGLARQRKVQVVTGTGRFDGPH--S  124
              + +G+  S E ++ +  +   K+++V KL +G+  L +   V+V++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  LAVSDGSRV-AFKRAVIAVGSRPVRLPFLP-DDPRIMDSTGALELKEIPRRLLVIGGGVI  182
            + + D  ++ ++K  ++A+GS PV L  +P D+ RI+ ST AL+L+E+P +L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  183  GMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVASRYEAVLLGTRVSAAQARD  242
            G+EL+T YA +GA+VT++E +D +L+G D  L K + +++     +V+ ++ V +++  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  D--GIHVSFDGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGVRVDEGGFIRVDAQQRTN  300
            D   +HV  DG +      Y   LV+ GR+PN + I+ E  GV +D+ GFI+++ + +TN
Sbjct  280  DEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  301  VGHIYAIGDVVGEPMLAHKAAHEGKVAAENAAGMRVANDARVIPAVAYTDPEVAWVGLTE  360
            + H+YAIGD  G  +LAHKA+ E+K+AAE  +G     D + +P V ++DPEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  361  TAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPATHALLGVGMVGPQAGDLIAE  420
              A+  G     + FP  A++RALS++ ++G+ +++ +  T  +LGV MVGP+ + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  421  AALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKK  468
            A +AIE GA++ D++LTIH+HPTL+E L  AAE+  G  T++ L +K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

508) Dtur_0515 in NC_011661


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1026),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 191/464 (42%), Positives = 320/464 (69%), Gaps = 6/464 (1%)

Query  5    DVIFLGAGSGGYVGAIRAADLGKKVCIIEARELGGTCLNRGCIPTKALLKSAEVFRTVKE  64
            D++ +GAGSGGYV+AIRAA+LGKKV +++  ELGG CLNRGCIP+KAL+ ++E  + +K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   AKTFGVNVDS-YSFDVNGIYSWKENVVKKLVSGVEYLLKSRKVVIKKGRGRIIDNETVEI  123
            A+T G++V +    D+  +  WK+ +V+KL  G+  LLK+  V +  G + + + +   I
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  124  ETSEGKEIVQGENIVIATGSEPAMIPTFKIDGKNVLTSDDALTLGEIPKDiviigagaig  183
               +  +I    ++++A GS P  + +  +D K +++S +AL L E+P+++V++G+G IG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  184  iEFATFYSTFGTKVTIVEMMPQVVPTLKDKKVANYLQRILNKKGIEVKVGAKIESVEVKD  243
            +E++T Y+ FG+KVTI+E    +++   D  +++ ++R L+  GI V  +A +++ E  +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSG-TDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  GKVYSTL---STGEVLESEKVLVSIGRKLNSDNIGLENIGVNVD-RGRIVVDEYLRTNVK  299
            + V   +   +  E+++ +  LVSIGRK N+++IGLENIGV +D +G I +++  +TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  300  NVYAIGDVIGGLLLAHKAMKEGEVVAEIIAGENKKMDYRVVPWAIFSSPEIAACGLTEEE  359
            +VYAIGD  GG LLAHKA  E+ + AE+I+G+N  +D++ +P  IFS PE+A  GLTE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  360  AKEQGIDVITGEFPFSANGKAVSMNATDGFVKVVARKEDKVIIGAQIIGPEASVMIAELA  419
            AKE+G + +++ FPF AN++A+S++ +DGFV+VVA K+ K ++G Q++GPE S +IAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  420  LAIQNNLTLDDVADTIHTHPTLPEAIMEAVKVPLGSVVHIYLRR  463
            +AI+     +D++ TIH+HPTLPE++MEA    +G   H+  ++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKK  503

509) lpdA in NC_018828


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1026),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 188/468 (41%), Positives = 314/468 (68%), Gaps = 11/468 (2%)

Query  8    DLLVLGGGPGGYTAAFRAADLGLSVVLVEQRPTLGGVCLNVGCIPSKALLHCAKALDEAR  67
            DLLV+G+G+GGY AA+RAA+LG  VVLV+ ++ LGGVCLN GCIPSKAL+  +  + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   AMSELGIEFS-EPRIRLDKLRAHKEALVAKLCGGLGGLARQRKVQVVTGTGRFDGPH--S  124
              + +G+  S E ++ +  +   K+++V KL +G+  L +   V+V++G + +  +H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  LAVSDGSRV-AFKQAVIAVGSRPVRLPFLP-DDPRIMDSTGALELKEIPRRLLVIGGGVI  182
            + + D  ++ ++K+ ++A+GS PV L  +P D+ RI+ ST AL+L+E+P +L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  183  GMELATVYAALGARVTVVELTDGLLPGCDRDLVKPLAQRVAGRYEAILLGTRVSAAQARD  242
            G+EL+T YA +GA+VT++E +D +L+G D  L K + +++     +++ ++ V +++  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  243  D--GIHVGFEGPQAPGPQVYDQVLVAAGRRPNGAAIDAERAGVRVDEGGFIRVDAQQRTN  300
            D   +HV  +G +      Y   LV+ GR+PN + I+ E  GV +D+ GFI+++ + +TN
Sbjct  280  DEVNVHVQVDGKEEIIQCDY--CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  301  VGHIYAIGDVVGEPMLAHKAAHEGKVAAETAAGMRVANDARVIPAVAYTDPEVAWVGLTE  360
            + H+YAIGD  G  +LAHKA+ E+K+AAE  +G     D + +P V ++DPEVA  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  361  TAAQRDGIAYEKAAFPWAASGRALSLGRGEGLTKILVDPATHALLGVGMVGPQAGDLIAE  420
              A+  G     + FP  A++RALS++ ++G+ +++ +  T  +LGV MVGP+ + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  421  AALAIEMGAEPGDIALTIHPHPTLSETLAFAAEAYEGTLTELYLTRKK  468
            A +AIE GA++ D++LTIH+HPTL+E L  AAE+  G  T++ L +K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

510) Hbal_1617 in NC_012982


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1025),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 200/467 (43%), Positives = 321/467 (69%), Gaps = 8/467 (1%)

Query  2    ISKKCKLLIIGAGPGGYVCAIRAGQLGVDTIIVEESHLGGTCLNVGCIPSKAIIHASNEF  61
            + K   LL+IGAG+GGYV AIRA+QLG   ++V+ ++LGG CLN GCIPSKA+I AS   
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---  92

Query  62   EKARENAKDNPLGIRADAP-EIDFSKTIDWKNGIVDRLTQGVAGLLKKAKVQHVNGRANF  120
            E+ ++    N +G++  +  ++D +  + WK+GIV++LT+G+  LLK   V+ ++G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  121  IDGKTVDVTTAGGIVRISTENVVIATGSKSIELPSLPFGGK-ICSSTEAlelrkppkkli  179
             ++    +   +    +S  ++++A GS ++EL S+PF+ K I SSTEAL+L+  P+ L+
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  180  iigggyiglelgMAYAKLGSKVTIVEASANILSMYDDDLRKPVEKRMKELGITLHCEAQA  239
            ++GGGYIGLELG AYAK+G+KVTI+E+S  ILS  D  L K V +++KE+GIT+  +A  
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  240  QTMSEDGK--ALLVSIKDKEVRIPTDKVFVTVGRKPNLTEFGLEKLSLVMNG-SFLKISN  296
            Q   + G    + V + +KE  I  D  +V++GRKPN   +GLE++++V+++ +F+KI+N
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  297  KCLTSMRDVYAIGDVTGEPMLAHRAMAQGEMVAEIVSGSKRVWDKRCIPAVCFTDPEIVS  356
            KC T++ +VYAIGD +G  +LAH+A  ++ + AE++SG + V D + +P V F+DPE+  
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  357  VGMSATDVVKNGIEVVTGKFPFSASGRAMSTEREDGFVTVIARKDNHEVLGIQGVGAEIS  416
             G++  +   +G E V+++FPF A++RA+S    DGFV V+A K+   VLG+Q VG+E+S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  417  ELSGAFTLAIEMASTLEDLSMVIQAHPTRAEALQESAFSALGRSLHM  463
             L +   +AIE ++  EDLS+ I+AHPT +E+L E+A + +G++ HM
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

511) lpdA in NC_021150


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1025),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 196/477 (42%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI++AQLG K  L++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH  121
             +S +  +  ++  +    +GEV +D+P ++ +KD IV +LT+G+ +L+K+NGV ++ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVP  181
            +  L+   +     ++  Q++   ++ILA GS PVE+ + P DQ  I+ ST AL++Q+VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT+LE+ D +L++ D  ++K  ++ L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGTEVKNKQVTVKF-VDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
            +A V G E    +V V   VD+  E  Q  D  +V++GR+P T  +   + GV LD++GF
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTH  360
            I +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G     + FPF A++RA++ +D+ GFV+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIAMEFGTSAEDLGMMVFahpalsealheaalaVSGHAIHVANRKK  477
            GP  + L+ ++ +A+E G++AEDL++ + AHP+L+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

512) lpdA in NC_021149


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1025),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 196/477 (42%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI++AQLG K  L++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH  121
             +S +  +  ++  +    +GEV +D+P ++ +KD IV +LT+G+ +L+K+NGV ++ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVP  181
            +  L+   +     ++  Q++   ++ILA GS PVE+ + P DQ  I+ ST AL++Q+VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT+LE+ D +L++ D  ++K  ++ L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGTEVKNKQVTVKF-VDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
            +A V G E    +V V   VD+  E  Q  D  +V++GR+P T  +   + GV LD++GF
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTH  360
            I +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G     + FPF A++RA++ +D+ GFV+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIAMEFGTSAEDLGMMVFahpalsealheaalaVSGHAIHVANRKK  477
            GP  + L+ ++ +A+E G++AEDL++ + AHP+L+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

513) lpdA in NC_012560


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1025),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 196/477 (42%), Positives = 325/477 (69%), Gaps = 11/477 (2%)

Query  3    QKF-DVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALL  61
            +K+ D++VIGAG+GGYVAAI++AQLG K  L++K       + LGG CLN GCIPSKAL+
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALI  89

Query  62   DSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH  121
             +S +  +  ++  +    +GEV +D+P ++ +KD IV +LT+G+ +L+K+NGV ++ G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVP  181
            +  L+   +     ++  Q++   ++ILA GS PVE+ + P DQ  I+ ST AL++Q+VP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILL  241
              L V+G+G IGLELG+  A++GA VT+LE+ D +L++ D  ++K  ++ L   G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GARVTGTEVKNKQVTVKF-VDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGF  300
            +A V G E    +V V   VD+  E  Q  D  +V++GR+P T  +   + GV LD++GF
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTH  360
            I +++ C T++  VYAIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVI  420
            PE+A  G TE+  K  G     + FPF A++RA++ +D+ GFV+V+A+ +T RVLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPSAAELVQQGAIAMEFGTSAEDLGMMVFahpalsealheaalaVSGHAIHVANRKK  477
            GP  + L+ ++ +A+E G++AEDL++ + AHP+L+E+L EAA +V GHA H+ N+K+
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

514) lpdV in NC_021237


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  274 bits (1024),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 188/450 (42%), Positives = 301/450 (67%), Gaps = 9/450 (2%)

Query  8    QLLIIGGGPGGYVAAIRAGQLGISTILVEGQSLGGTCLNIGCIPSKALIHVAEQFHQTRH  67
            +LL+IG+G+GGYVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+    +H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKH  97

Query  68   HSQGSALGIEVAAPT-LNIGKSVEWKDGIVDRLTTGVAALLKKNKVQVIQGWARVIDGK-  125
              +++++G+ V++   +++   V WKDGIV++LT G+ +LLK N V+VI G A + ++  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  126  -TVEIEGADTRIQCEHLLLATGSKSVNLPMLPIGG-PIISSTEALAPKTLPNRLTVVGGG  183
              + IE+ +  +   +L+LA GS +V+L  +P++   IISSTEAL  + +PN+L VVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  YIGLELGIAYRKLGVEVSVVEAQERILPAYDGELTQPVLDSVKQLGIKLYLKHSVLGFDA  243
            YIGLELG AY K+G  V+++E+ + IL++ D  LT+ V   +K++GI +     V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  ASSSLQVR-EPNGDTLNLATDQVLVAVGRKPNTQGWNLESLNLDMNGAA-IKIDHRCQTS  301
            ++  ++V+ + +G    +  D  LV++GRKPNT    LE++ + +++ + IKI+++CQT+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  302  MRNVWAIGDLSGEPMLAHRAMAQGEMVAELIAGKHREFNPAAIPAVCFTDPELVVVGKTP  361
            + +V AIGD +G  +LAH+A  ++ + AE+I+G++  ++  A+P V F+DPE+   G T 
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  362  DEARAAGLDCIVSSFPFAANGRAMTLESKSGFVRVVARSDNHLIVGWQAVGVGVSELSTA  421
             EA+  G + + S FPF AN+RA+++    GFV+VVA  +   ++G Q VG  VS L + 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  422  FGQSLEMGARLEDIGGTIHAHPTLGEAVQE  451
               ++E GA  ED++ TIHAHPTL E++ E
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLME  487

515) lpdA in NC_008255


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  273 bits (1022),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 199/453 (44%), Positives = 308/453 (68%), Gaps = 6/453 (1%)

Query  3    DVVVIGSGPGGYVAAIRCAQLGMKTALIEKYSTLGGTCLNVGCIPSKALLDSSEHYYNAT  62
            D++VIG+G+GGYVAAIR AQLG K  L++K + LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  63   HTFKEHGIDVK-DVKVNLKQMIDRKAGVVKQTCDGINYLMKKNKVDVHTGIGSFVDKNTI  121
            H+ +  G+ V  +V+V++ +++ +K G+V++  DGI  L+K N V+V +G + + + +  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVTAADGSVKELKTAKTIIATGSKPTSLPNVAIDKKRIITSTEALELTEVPKHLIVIGGG  181
            K+   D   + +     I+A GS P  L ++++D+KRII+STEAL+L EVP+HL+V+GGG
Sbjct  159  KIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  182  VIGMELGSVYARLGAKVSVVEFMDTLIPTMDKALGKELIKVSKNHLGFDFYFSHKVTGAT  241
             IG+ELG+ YA++GAKV+++E  DT+++  D  L K  +K   +++G+       V G+ 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKT-VKRHLKEIGITVITDALVQGGE  276

Query  242  AKGKEVTVTAEDKDGKVLELKGDYVLVATGRRPYTEGLGLEAAGVKLDERGRVAVDGHLQ  301
              G EV V  +  DGK   ++ DY LV+ GR+P T  +GLE  GV LD++G + ++   Q
Sbjct  277  NTGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  302  TNVPGIYAIGDVVVGAMLAHKAEEEGVFVAESIAGQKPHINYNLIPGVVYTWPEVAAVGY  361
            TN+  +YAIGD   G +LAHKA  E+ + AE I+GQ++ I+++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  362  TEEQLKKDGKAYKVGNFPFKASGRARASMDLDGFVKVLADKETDEILGVHMIGPRVADMI  421
            TE + K  G     + FPF+A++RA +  D DGFV+V+A+K+T  +LGV+M+GP V+ +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  422  AEAVVAMEFRASAEDISRMSHAHPTFTESFKEA  454
            AEAV A+E  A+AED+S   HAHPT+ E++ EA
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

516) Deide_20540 in NC_012526


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  273 bits (1023),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 194/466 (42%), Positives = 308/466 (67%), Gaps = 9/466 (1%)

Query  5    DVLVIGGGPAGYVAAIRAAQLGFSTACVDAFERDGKASLGGTCLNVGCIPSKAMLDSSEK  64
            D+LVIG+G++GYVAAIRAAQLG     VD      KA LGG CLN GCIPSKA++ +SE+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD------KAELGGVCLNRGCIPSKALISASER  94

Query  65   FEMITHEAAEHGIDVQGA-SVDVARMLSRKAGVVDKLTGGIAYLFKKNKVKSFFGLGRLV  123
               I H  +  G+ V G   VD++ ++ +K G+V+KLT+GI  L+K N V  + G + L 
Sbjct  95   VKHIKHANT-MGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  124  RQDGDGWVVDAAGTEVRAKHVIVATGSNPRALPLAPFGG-HIVENSGALAFEQVPGKLGV  182
              +     ++        K++I+A GS P  L   PF+  +I+ ++ AL +++VP  L V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  183  IGAGVIGLELGSVWRRLGAQVTVLEALPGFLMAADDAIAKEALKQFQKQGLEFHFGVSIT  242
            +G+G IGLELG+   ++GA+VT+LE+   +L ++D  ++K   ++++  G+    +  + 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  243  EVTQDNAGVTVTYQENGNAVTAQFDKLIVSIGRVPNTQGLGADTVGLELDERGFVKVDSH  302
               +    V V  Q +G+    Q D  +VSIGR PNT  +G + +G+ LD++GF+K+++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  YRTNLPGIYAIGDVIGGAMLAHKAEEEGVALAEMIAGQAGHVNYDVIPWVIYTSPEIAWA  362
             +TN+  +YAIGD  GG +LAHKA  E+   AE+I+GQ + ++++ +P VI++ PE+A +
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GLTEKGAKEKGLQVKTGQFPFSANGRALGHGDTRGFVKVVADAQTDKLIGIHMVGGGVSE  422
            GLTEK AKEKG +  +++FPF AN+RAL+ +D+ GFV+VVA+ +T +++G++MVG  VS 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  LIGEVVAIMEFGGSSEDLARTVHAHPTLSEAVKEAALAADKRALHM  468
            LI+E V  +E G+++EDL+ T+HAHPTL+E++ EAA +   +A HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

517) lpd in NC_005966


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  273 bits (1022),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 194/474 (41%), Positives = 323/474 (69%), Gaps = 13/474 (2%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRVHKGKPSLGGTCLNVGCIPSKALLDSSHH  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTIHHLGDHGIT-TGEVNIDIAKMLARKDKVVENLTGGVAQLLKGNGIEWLQGTGKLL  124
              + I H    G+  +GEV++D++ ++ +KD +V++LT+G+  LLKGNG+E + G +  L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YL  152

Query  125  AGKKVEFVPFEGETQVLEPKYVILASGSVPVNIPVAPVDQDLIVDSTGALEFAEVPKRLG  184
            +   +  + +E+E Q++  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGSEVVVFEALDAFLPMADKALSKEFQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++G+ V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYNQAGEDKEQVF--DKLIVCVGRKPYAEGLLAEDAGIKLTDRGFIEV  302
             G E  G EV V  +   ++KE+++  D  +V +GRKP +  +  E+ G+ L D+GFI +
Sbjct  273  QGGENTGDEVNV--HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  303  NDHCATSLEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEA  362
            N+ C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE 
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  363  AWVGLTEEQAVANGHEVKTGQFPFAVNGRALAAGEAAGFVKFVADAKTDRLLGMHVIGPG  422
            A  GLTE +A  +G E  +++FPF  N+RAL+ ++A GFV+ VA+ +T R+LG++++GP 
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  423  ASDIVHQGMIALEFVSSVEDLQLMTFGHPTYSEVVHEAALAVDGRAIHAIQRKR  476
             S ++ ++++A+E  ++ EDL L   +HPT +E + EAA +V G+A H +++K+
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

518) Q91_1906 in NC_018697


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  273 bits (1023),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 181/448 (41%), Positives = 306/448 (69%), Gaps = 2/448 (0%)

Query  115  HVDVLVMGAGPGGYTAAFRAADLGKKVALIERHASLGGVCLNVGCIPSKALLHQAQVIHE  174
             VD+LV+GAG+GGY AA+RAA+LGKKV L+++ A LGGVCLN GCIPSKAL+  ++ + +
Sbjct  39   YVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH  97

Query  175  AAEMSAHGVTFEPPT-LDIDAIRGNKENIIQRLTGGLAGLAKQRNVTVVTGYANFASSHS  233
              + ++ G+       +D+  +   K+ I+++LT+G+  L K   V V++G A ++ +H 
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  234  VVVENEGSSQTISFDNAIIAAGSQPIKIPGFPYDDDRLMDSTGALALADVPEKMLVIGGG  293
              +  E+  Q +S+ + I+A GS P+ + + P+D+ R++ ST AL L +VP+ ++V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  294  IIGLEMATVYHALGSKISVIELMDQLVAGCDKDLVKPLHKRLSKQLENIYLKAKVTAIES  353
             IGLE++T Y  +G+K++++E  D +++G D  L K + ++L      +   A V + E+
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  354  TDDGLKVSFEGEGVPDSAVYDRVLMSVGRRPNGSLISADKAGVNVDERGFISVDKQMRTN  413
            T+D ++V  + +G  +    D  L+S+GR+PN + I+ ++ GV +D++GFI ++++ +TN
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  414  VPHIFAIGDVVGNPMLahkavheakvaaevIAGEKAAFDPMTIPSVAYTDPEISWMGLTE  473
            + H++AIGD  G  +LAHKA  EAK+AAEVI+G+++ +D  ++P V ++DPE++  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  474  TKAKADGIKYEKSVFPWAASGRALSIGRDEGMTKILWDPETKRILGAGIVGTNAGELIAE  533
              AK  G     S FP  A++RALS++  +G  +++ + +TKR+LG  +VG + + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  534  AVLALEMGADVDDMGLTIHPHPTLSETL  561
            AV+A+E GA+ +D++LTIH+HPTL+E L
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPL  485

519) CYCME_0534 in NC_021917


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  273 bits (1020),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 181/448 (41%), Positives = 306/448 (69%), Gaps = 2/448 (0%)

Query  115  HVDVLVMGAGPGGYTAAFRAADLGKKVALIERHASLGGVCLNVGCIPSKALLHQAQVIHE  174
             VD+LV+GAG+GGY AA+RAA+LGKKV L+++ A LGGVCLN GCIPSKAL+  ++ + +
Sbjct  39   YVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH  97

Query  175  AAEMSAHGVTFEPPT-LDIDAIRGNKENIIQRLTGGLAGLAKQRNVTVVTGYANFASSHS  233
              + ++ G+       +D+  +   K+ I+++LT+G+  L K   V V++G A ++ +H 
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  234  VVVENEGSSQTISFDNAIIAAGSQPIKIPGFPYDDDRLMDSTGALALADVPEKMLVIGGG  293
              +  E+  Q +S+ + I+A GS P+ + + P+D+ R++ ST AL L +VP+ ++V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  294  IIGLEMATVYHALGSKISVIELMDQLVAGCDKDLVKPLHKRLSKQLENIYLKAKVTAIES  353
             IGLE++T Y  +G+K++++E  D +++G D  L K + ++L      +   A V + E+
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  354  TDDGLKVSFEGEGVPDSEVYDRVLMSVGRRPNGSLISADKAGVNVDERGFISVDKQMRTN  413
            T+D ++V  + +G  +    D  L+S+GR+PN + I+ ++ GV +D++GFI ++++ +TN
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  414  VPHIFAIGDVVGNPMLahkavheakvaaevIAGEKAAFDPMTIPSVAYTDPEISWMGLTE  473
            + H++AIGD  G  +LAHKA  EAK+AAEVI+G+++ +D  ++P V ++DPE++  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  474  TKAKADGIKYEKSVFPWAASGRALSIGRDEGMTKILWDPETKRILGAGIVGTNAGELIAE  533
              AK  G     S FP  A++RALS++  +G  +++ + +TKR+LG  +VG + + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  534  AVLALEMGADVDDMGLTIHPHPTLSETL  561
            AV+A+E GA+ +D++LTIH+HPTL+E L
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPL  485

520) Mesil_1132 in NC_014212


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  272 bits (1018),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 194/466 (42%), Positives = 316/466 (68%), Gaps = 11/466 (2%)

Query  6    DVIVIGTGPGGYHAAIRAAQLGKRVLAVEAEYVGGVCLNVGCIPTKALLHAAEELEGVKH  65
            D++VIG+G+GGY AAIRAAQLGK+V+ V+   +GGVCLN GCIP+KAL+ A+E +  +KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   GASFGLEVK-DAKIDLKKLGSWRDGIVKRLTGGVSQLFKGNKVELKTGFAKF-----VGP  119
            + + GL V  + ++D+  +  W+DGIV++LT+G+  L+KGN VE+ +G   +     ++ 
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAK  159

Query  120  KTIEVAGERIEGKTFIIATGSEPNTLPGFEVDQKDIVDSTGALRVEDKFPKRMLCIGGGA  179
              IE   + +  K +I+A GS P  L +   DQK I+ ST AL++++  P++++ +GGG 
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGY  218

Query  180  IGLEFAQVYKRMGAEVTVIEFMGQILPAADPETAGLLAKILTKQGIAIKTHTKGVKVERK  239
            IGLE++  Y + GA VT++E  + IL+++DP  +  + + L   GI++ T++     E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  KDGLHVTLEDVKTGKQEVIVVDKILVATGRRPRGKGLGLEAIGVKVDERGYIPTNEKMET  299
             D ++V ++    GK+E+I  D  LV+ GR+P    +GLE IGV +D++G+I  N+K +T
Sbjct  279  GDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NVPGIYAIGDVTRPPLLAHKAMKeglvaaenaaggnavMDYQ-IPNVVYTSPEWAAVGLT  358
            N+  +YAIGD +   LLAHKA  E+ +AAE  +G N+V+D+Q +P V+++ PE A  GLT
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  359  EEEATQAGYKVKVGKFPLSASGRAMTLDATDGLIKLIGDAETDLLLGAHLVAPSASDLIA  418
            E EA + GY    ++FP+ A++RA+++  +DG+++++++ +T  +LG ++V+P  S LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  419  EMALAIEMGATVTDIGLTVHAHPTLSEGIMEAAENLHKQAIHIANR  464
            E  +AIE GA   D++LT+HAHPTL+E +MEAAE +  +A H+ N+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

521) M301_0676 in NC_014207


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  272 bits (1018),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 187/455 (42%), Positives = 315/455 (70%), Gaps = 14/455 (3%)

Query  120  EVVVLGSGPGGYTAAFRAADLGKKVVLVERYSTLGGVCLNVGCIPSKALLHTAKVITEAE  179
            +++V+G+G+GGY AA+RAA+LGKKVVLV++ + LGGVCLN GCIPSKAL+ ++  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  180  ETAHHGVTF-GAPQVDLEQLRNWKANDVVGKLTGGLAAMAKQRNVTTVQGVGKFTSPNQM  238
            ++   G+   G  QVD+ ++ +WK +++V KLT+G+ ++ K   V  + G + + +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  239  SVTSEDGKVTTISFDNAIIAAGSQATKFPGVAADE-RIMDSTGALALADVPKRMLVIGGG  297
            +    ++    +S+ + I+A GS +  + +++ D+ RI+ ST AL L +VP++++V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  298  IIGLEMGTVYDALGSKVSVVEFTDGLIQGCDRDLVRPLQKRMEKRFEAIMLNTKVASMEP  357
             IGLE+GT Y  +G+KV+++E +D ++ G D  L + +++++     +++ ++ V + E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  358  KKDGIHVVFEGVNGNADAPKGVEVYDRVLVSIGRRPNGKNIGAENAGVAVDDYGFIAVDK  417
              D ++V     + + D+   +   D  LVSIGR+PN  +IG EN GV +DD GFI +++
Sbjct  278  TGDEVNV-----HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  418  QMRTNVPHIFAIGDIVGQPMLAHKATHEAKVAAEVIAGEK--VEFVASVIPSVAYTDPEV  475
            + +TN+ H++AIGD  G  +LAHKA+ EAK+AAEVI+G++  ++F A  +P V ++DPEV
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQA--MPFVIFSDPEV  390

Query  476  AWVGVTEIEAKAKGLEIEKASFPWAASGRALSIARTEGTTKLIFDKNTHRvigagivgvn  535
            A  G+TE EAK KG E   + FP  A++RALS++ ++G  +++ +KNT RV+G  +VG +
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  536  agELLAEAVLAIEMGADAHDLGLTIHAHPTLSETI  570
             + L+AEAV+AIE GA+A+DL+LTIHAHPTL+E +
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

522) Sfum_2645 in NC_008554


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  272 bits (1017),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 197/473 (42%), Positives = 336/473 (72%), Gaps = 4/473 (0%)

Query  4    GEFTQETDVLVIGAGPGGYAAAFRAADLGLDVTMVDTGDRPGGVCLFRGCIPSKTLLYVT  63
            GE  +  D+LVIGAG+GGY AA+RAA+LG  V +VD ++  GGVCL RGCIPSK+L+  +
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISAS  92

Query  64   ELLYDVGRAADMGISL-GEPKIDLPRLREWKKQVVDKLAGGLVELCRSRGVQFLRGRAVF  122
            E + ++ +A  MG+ + GE ++D+P +  WK  +V+KL++G+  L ++ GV+ + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  123  ESSSYARL-LEAEISRIKFKHAVIATGSHARSIAGAEFRDGGRIMDSTGALELTDIPKRl  181
              +  A++ +E E   + +K+ ++A GS +  + +  F D  RI+ ST AL+L ++P++L
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPF-DQKRIISSTEALQLQEVPNHL  211

Query  182  lvvgggyvgvelgsvYASLGSRVTMVEAGERLMAGADQDLTAFLSRRLSGLFEAVHVDTR  241
            +VVGGGY+G+ELG+ YA +G++VT++E+++ +++G+D  LT  + R+L  +  +V  D+ 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  242  IQSLREFDDWVEVELEGKVDQPAQSFDRVLIAVGREPNSGGIGLEKTGVEVNEHGFIVVD  301
            +Q+  + +D V+V+++    +     D  L+++GR PN+G IGLE+ GV ++++GFI ++
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  302  EQRRTTDGKIYAVGDVAGGVMLAHKAMHEGKVAAEAIAGQKSAFDYQAIPAVVYADPQLA  361
            ++ +T    +YA+GD AGG +LAHKA  E+K+AAE I+GQ+S +D+QA+P V+++DP++A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  362  WVGLTEEQARRENRPVKVSRFPWSASGRAATMGVPRGMTKVIVDPDTQRVLGVGIVGREA  421
              GLTE +A+        SRFP  A++RA +++ + G  +V+ + +T+RVLGV +VG E 
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  422  GEMIAEAVLALEMGALAEDLALSMHPHPTLseseeeaaeaFLGTSTHILPQRR  474
            + +IAEAV+A+E GA AEDL+L++H+HPTL+E+  EAAE+ +G +TH+L +++
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

523) AMBLS11_13920 in NC_018692


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  271 bits (1012),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 181/449 (41%), Positives = 308/449 (69%), Gaps = 9/449 (2%)

Query  7    QLVVLGGGPGGYSAAFRAADLGIETVIVDSRDTLGGVCLNVGCIPSKALLHVAKVMKEAK  66
            +L+V+G+G+GGY AA+RAA+LG   V+VD +  LGGVCLN GCIPSKAL+  +  +K+ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HLASHGVSF-GEPTIDLDKIREYKDGVVKQLTNGLSGMSKMRKTKHVQGFGKFTGANTLE  125
            H  + G+   GE  +D+  +   KDG+V++LT+G+  + K      + G + +T A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VKNGDDVTTITFEKAIIAAGSEPVSLPFIP-EDDRVIDSTGALEMKDIPEKMLVLGGGII  184
            +K  D+   +++   I+A GS PV L  +P ++ R+I ST AL+++++P+ ++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEMGTVYEALGSKIDVVEFLDQLIPAADKDIMKVFMKDYKD-KFNIMLETKVTAVEAKD  243
            GLE+GT Y  +G+K+ ++E  D +++++D  + K   ++ K+  + ++ ++ V + E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  DGLYVTFEGKNAPAEPVRYDKVLVAVGRKPNGKLVGAEAAGVNVDERGFINVDKQMRTNV  303
            D + V  +  ++  E ++ D  LV++GRKPN   +G E  GV +D++GFI+++++ +TN+
Sbjct  280  DEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  304  DHIFAIGDLVGQPMLAHKAVHEGHVAAEVIAGQKHYFDPRAIPSVAYTEPEVAWVGLTEK  363
            +H++AIGD  G  +LAHKA  E+ +AAEVI+GQ+  +D +A+P V +++PEVA  GLTEK
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  364  EAKEQGVSYETAT--FPWAASGRAIASDATNGMTKMIFDKETGRVIGGAMVGTNAGEMLG  421
            EAKE+G  YET +  FP  A++RA++   ++G  +++ +K+T RV+G  MVG + + +++
Sbjct  399  EAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  EIGLAIEMGADAEDVALTIHAHPTLNESI  450
            E  +AIE GA+AED++LTIHAHPTL E++
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

524) P700755_003352 in NC_018721


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  271 bits (1014),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 192/444 (44%), Positives = 306/444 (69%), Gaps = 4/444 (0%)

Query  5    DVAVIGSGPGGYVAAIRCAQLGMKTVIIEKYATKGGTCLNVGCIPSKALLDSSHHYEDAI  64
            D+ VIG+G+GGYVAAIR AQLG K V+++K A  GG CLN GCIPSKAL+ +S++  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KNFEEHGIDISGEVKVNLGNMMKRKSGVVDQTTKGIDFLMEKNNIESYQGIGSFKDKTHI  124
            K+ +  G+ +SGEV+V++ +++K+K G+V++ T GI  L+  N +E   G  ++   +HI
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  125  IITDGEGNETVIEAKNTIIATGSKPSSLPFINIDKERIITSTEALSLKEIPKHLIMIGGG  184
                 E++E ++  K+ I+A GS P  L  + +D+ RII+STEAL L+E+P+HL+++GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  185  VIGLELGQVYKRLGAEVTVLEYMDRIIPGMDKDQSKELmkamkkqkakFMLSHKVKSVER  244
             IGLELG  Y ++GA VT+LE  D I++G D   +K + + +K      +    V++ E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  NGDEITVKADDKNGKEVEFKGDYCLVSVGRRPFTDGLNADKAGIEINENGKVKVNEKLQT  304
             GDE+ V  +  +GKE  ++ DYCLVS+GR+P T+ +  ++ G+ ++++G +K+N+K QT
Sbjct  278  TGDEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  305  TADNIYAIGDVIDGLMLAHKAEEEGTFVAEVISGQKPHINYNLIPNVVYTWPEVASVGKN  364
              +++YAIGD  +G +LAHKA  E+ + AEVISGQ++ I+++ +P V+++ PEVA  G  
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  365  EEQLIEDNIKYNTGKFPMRALGRSRASGDVDGFVKIFSDKETDEVLGVHMVGARVADLIA  424
            E +  E      +++FP +A +R+ + +D DGFV++ ++K+T  VLGV+MVG+ V+ LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  425  EAVTAMEFRASAEDIARMSHAHPT  448
            EAV A+E  A+AED++   HAHPT
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPT  480

525) pdhD in NC_009142


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  271 bits (1014),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 197/487 (41%), Positives = 321/487 (66%), Gaps = 24/487 (4%)

Query  5    DVLVIGGGPGGYVAAIRAAQRGLSVGVVEKERTGGVCLNWGCIPTKAMLRSAEVYETVLH  64
            D+LVIG+G+GGYVAAIRAAQ G  V +V+K   GGVCLN+GCIP+KA++ ++E    + H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   AADYGVQ-AENVSLDYDAVSRRKDGIVKGLTDGVASLLKANGVTVIYGHARFTGPTTLDV  123
            A   G++ + +V +D   V ++KDGIV+ LTDG+ +LLK+NGV VI G+A +T +     
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH----  156

Query  124  YAVGESALGAGGPKYAADPTGDQPVEQVKARDVIIATGSVPVQLPLPGADLPGVITSDGA  183
              ++   +      ++              +D+I+A GS+PV+L     D   +I+S  A
Sbjct  157  --IAKIKIEDEEQIFSY-------------KDLILAIGSLPVELKSMPFDQKRIISSTEA  201

Query  184  FGLTEVPKRIAVIGGSAVGAEWASLFNTFGAEVTIIEMQPTLVPAEDAEIGKALGRSFGK  243
            + L EVP+++ V+GG+ +G E ++ +  FGA VTI+E   T++++ D+ + K++ R +  
Sbjct  202  LQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKE  261

Query  244  AGINVLTGSTVSKIESAGRGKNAGLKVFVDGPKAQEIDADVVLVGVGRKPNTAALDLEKA  303
             GI V+T++ V    +   G +  + V VDG K + I+ D  LV++GRKPNT+ ++LE+ 
Sbjct  262  IGITVITDALVQ--GGENTGDEVNVHVQVDG-KEEIIQCDYCLVSIGRKPNTGKIGLENI  318

Query  304  GVATDARGFVPVDEQLRTNVEHVYAIGDVTGRVLLAHVASHQGVTAAEVIAGSDHARMDY  363
            GV  D +GF+ ++++ +TN+EHVYAIGD +G  LLAH AS ++  AAEVI+G +++ +D+
Sbjct  319  GVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISG-QNSVIDF  377

Query  364  DVIPAATFTHPEIASVGLTEAQAVEAGHEVVTGKFPFAAIGRTKTYGNSDGFMKIVAGKQ  423
            + +P   F++PE+A  GLTE +A E G E V+++FPF A +R+ + +++DGF+++VA K+
Sbjct  378  QAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKN  437

Query  424  YGEVLGVHIIGQSASDLITEGALAINLEATLDELAETVHAHPTLGEIGMEAAMSALGLPI  483
               VLGV+++G   S LI+E+ +AI+  A  ++L+ T+HAHPTL E  MEAA + +G + 
Sbjct  438  TKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHAT  497

Query  484  HVAPPKK  490
            H+   K+
Sbjct  498  HMLNKKQ  504

526) RMB_04265 in NC_016931


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  271 bits (1012),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 190/465 (41%), Positives = 325/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEEAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  KV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSTVPENLIVVGGGY  178
            K+   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEISTQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSRKVNLTIEEGGKSSVITSDIVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  +  VN+ ++ +GK  +I  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

527) Hoch_4996 in NC_013440


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1009),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 196/461 (43%), Positives = 316/461 (69%), Gaps = 5/461 (1%)

Query  5    DMIVIGAGPGGYVAAIRAAQLGLDVASVEREAALGGTCVRVGCIPSKALLESSERYHEAK  64
            D++VIGAG+GGYVAAIRAAQLG  V  V++ A LGG C+  GCIPSKAL+ +SER  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HGLSAHGIEV-GEVGFDLGAMMARKDKVVKSNCDGVAYLFKKNQVTRYRGHAEIQAPGKV  123
            H+ ++ G+ V GEV  D+  ++ +KD +V+   DG+  L+K N V    G+A +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  VVHADGEDQVLEAEHIVIATGSSVAKLRGVEPDGDRIGTSTEALAYPEVPERLVVIGAGY  183
             +  ++E+Q++   ++++A GS    L+++  D  RI +STEAL   EVP++LVV+G+GY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  IGLELGSVWQRLGSQVTVLEYMDRILPGMDAEIAADALKVFKKQGLQFHLGARVTGAALT  243
            IGLELG+   ++G++VT+LE  D IL+G D+ ++    + +K  G+    +A V G+  T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  -DAGDVEVQVDGMEPL-RCDRVLLATGRSPNTEGLGLDAVGVACDERGRVTVDERFRTNV  301
             D  +V+VQVDG E + +CD  L++ GR PNT  +GL+ +GV  D++G + ++++ +TN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  302  EGIYAIGDVIAGPMLAHKAEEEGVALAEMIVTGHGHVDYDTVPGIVYTEPEIATVGKTEE  361
            E +YAIGD  +G +LAHKA  E+   AE+I   ++ +D++++P +++++PE+A  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  362  QLKEAGVAYAKGVFPYQANGRARALGATEGKVKVLADERSDRILGVHIIGSRAGDLIAEA  421
            + KE G     + FP+QAN+RA +++ ++G V+V+A+  + R+LGV+++G+  + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  422  VAAMTFGASSEDLARTMHAHPTLSEILKEAALGVAKRAIHI  462
            V A+  GA++EDL+ T+HAHPTL+E L EAA GV  +A H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

528) PPS_3808 in NC_015733


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1010),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 191/454 (43%), Positives = 303/454 (67%), Gaps = 13/454 (2%)

Query  18   PGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQTSRFAGPSELG  77
            +GGYVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+  +  +   ++ +G
Sbjct  49   SGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH---ANTMG  105

Query  78   ISVASP-RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVIHGWAKVLDGK----QVEVD  132
            + V++  ++D+ + V WKDGIV++LT G+ +LLK +GV VI G A + ++     ++E +
Sbjct  106  LKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDE  165

Query  133  GQRIQCEHLLLATGSSSVELPMLPLGG-PIISSTEALAPKTLPQHLVVVGGGYIGLELGI  191
             Q +   +L+LA GS +VEL  +P++   IISSTEAL  + +P+HLVVVGGGYIGLELG 
Sbjct  166  EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGT  225

Query  192  AYRKLGARVSVVEARERILPTYDSELTAPVAESLKKLGITL---HLGHSVEGYEGGCLLA  248
            AY K+GA+V+++E+ + IL+  D+ LT  V   LK +GIT+    L ++ E   +   + 
Sbjct  226  AYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVH  285

Query  249  RDGQGGQLRLEADQVLVAVGRRPRTQGFNLECLDLKMNGAA-VAIDERCQTSMRNVWAIG  307
             + +G +  ++ D  LV++GR+P T  + LE +++ +++ + + I+++CQT++ +V AIG
Sbjct  286  VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIG  345

Query  308  DVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPSAIAAVCFTDPEVVVVGKTPEQASQQGL  367
            D AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G 
Sbjct  346  DCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGY  405

Query  368  DCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMG  427
            + + ++FPF AN+RA+S+    GFV+VVA ++   +LG Q VG  VS L +    ++E G
Sbjct  406  ETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAG  465

Query  428  ACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  461
            A  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  466  ANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

529) bkdC in NC_021505


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1011),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 190/454 (42%), Positives = 302/454 (67%), Gaps = 13/454 (2%)

Query  16   PGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQTSRFAGPSVLG  75
            +GGYVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+  +  +   ++ +G
Sbjct  49   SGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH---ANTMG  105

Query  76   ISVASP-RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVIHGWAKVLDGK----QVEVD  130
            + V++  ++D+ + V WKDGIV++LT G+ +LLK +GV VI G A + ++     ++E +
Sbjct  106  LKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDE  165

Query  131  GQRIQCEHLLLATGSSSVELPMLPLGG-PVISSTEALAPKALPQHLVVVGGGYIGLELGI  189
             Q +   +L+LA GS +VEL  +P++   +ISSTEAL  + +P+HLVVVGGGYIGLELG 
Sbjct  166  EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGT  225

Query  190  AYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIAL---HLGHSVEGYENGCLLA  246
            AY K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++    L ++ E   +   + 
Sbjct  226  AYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVH  285

Query  247  NDGKGGQLRLESDQVLVAVGRRPRTKGFNLECLDLKMNGAA-IAIDARCQTSMHNVWAIG  305
             +  G +  ++ D  LV++GR+P T  + LE +++ +++ + I I+ +CQT++++V AIG
Sbjct  286  VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIG  345

Query  306  DVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGL  365
            D AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G 
Sbjct  346  DCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGY  405

Query  366  DCIVAQFPFAANGRAMSLEAKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMG  425
            + + ++FPF AN+RA+S+    GFV+VVA ++   +LG Q VG  VS L +    ++E G
Sbjct  406  ETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAG  465

Query  426  ACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            A  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  466  ANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

530) ambt_02325 in NC_015554


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1009),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 181/449 (41%), Positives = 308/449 (69%), Gaps = 9/449 (2%)

Query  7    QLVVLGGGPGGYSAAFRAADLGIETVIVDSREVLGGVCLNVGCIPSKALLHVAKVMKEAK  66
            +L+V+G+G+GGY AA+RAA+LG   V+VD  E LGGVCLN GCIPSKAL+  +  +K+ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HMASHGVTF-GEPEIDLDKIREYKDSVVKQLTNGLGGMSKMRKTKHVKGYGKFTGANTLE  125
            H  + G+   GE ++D+  +   KD++V++LT+G+  + K      + G + +T A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VKNGDDVTTITFEKAIIAAGSEPVSLPFIP-EDDRIIDSTGALEMKDIPEKMLVLGGGII  184
            +K  D+   +++   I+A GS PV L  +P ++ RII ST AL+++++P+ ++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEMGTVYEALGSKIDVVEFLDQLIPAADKDIMKVFMKDYKE-KFNIMLETKVTAVEAKD  243
            GLE+GT Y  +G+K+ ++E  D +++++D  + K   ++ KE  + ++ ++ V + E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  D--GLYVTFEGKNAPSEQVRYDKVLVAVGRRPNGKMVGADTAGVNVDDRGFINVDKQMRT  301
            D   + V  +GK+   E ++ D  LV++GR+PN   +G +  GV +DD+GFI+++++ +T
Sbjct  280  DEVNVHVQVDGKE---EIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  302  NVEHIFAIGDLVGQPMLAHKAVHEGHVAAEVIAGQKHYFDPRGIPSVAYTEPEVAWVGVT  361
            N+EH++AIGD  G  +LAHKA  E+ +AAEVI+GQ+  +D +++P V +++PEVA  G+T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  EKEAKEQGLSYETAVFPWAASGRAIASDATNGMTKMIFEKDTGRVLGGAMVGTNAGEMLG  421
            EKEAKE+G    ++ FP  A++RA++   ++G  +++ EK+T RVLG  MVG + + +++
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  EIGLAVEMGADAEDVALTIHAHPTLNESI  450
            E  +A+E GA+AED++LTIHAHPTL E++
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

531) Celal_3632 in NC_014934


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1008),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 190/444 (43%), Positives = 308/444 (70%), Gaps = 4/444 (0%)

Query  5    DVAIIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYEDAI  64
            D+ +IG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFEEHGIEISGEIKLNLEKMISRKQSVVDMTTKGIEFLMSKNKIDVFTGTGSFKDATHI  124
            KH +  G+ +SGE+++++  ++ +K+++V+  T GI  L+  N ++V++G  ++   +HI
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  125  NVAKNDGTTETIEAKNTIIATGSKPSTLPFIKLDKERVITSTEALELKEVPKHMiviggg  184
               K ++  + +  K+ I+A GS P  L  + +D+ R+I+STEAL+L+EVP+H++V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  185  vigLELGQVYKRLGAEVTVVEFMDRIIPGMDGALSKELMKVLKKQKIKFQLSHKVKSVER  244
             IGLELG  Y ++GA VT++E  D I++G D  L+K + + LK   I       V++ E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  NGNEIIVKADNKKGEEITFTGDYCLVAVGRHAYTDGLNLEAAGVKLEERGRVAVNGQLQT  304
             G+E+ V  +    EEI +  DYCLV++GR + T+ + LE  GV L+++G + +N + QT
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  305  NVSNIYAIGDVIKGAMLAHKAEEEGTLVAEVLAGQKPHIDYNLIPGVVYTWPEVAAVGQT  364
            N+ ++YAIGD   G +LAHKA  E+ + AEV++GQ++ ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  365  EEQLKEAGIEYKAGSFPMRALGRSRASGDTDGFVKILADKKTDEVLGVHMIGARVADLIA  424
            E + KE G E  ++ FP +A +R+ + +D+DGFV+++A+K+T  VLGV+M+G+ V+ LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  425  EGVTAMEFRASAEDIARMSHAHPT  448
            E+V A+E  A+AED++   HAHPT
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPT  480

532) Msip34_0657 in NC_012969


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1009),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 188/451 (42%), Positives = 315/451 (70%), Gaps = 10/451 (2%)

Query  126  EVVVLGSGPGGYTAAFRAADLGKKVVLIERYSTLGGVCLNVGCIPSKALLHTAKVITEAE  185
            +++V+G+G+GGY AA+RAA+LGKKVVL+++ + LGGVCLN GCIPSKAL+ ++  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  186  ETSHHGVSFSAP-KVDLDTLRNWKANDVVGKLTGGLAAMAKQRGVTVVQGVGKFTSSHQI  244
            +++  G+  S+  +VD+  + +WK +++V KLT+G+ ++ K  GV V+ G   + +  +I
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  245  AVTAADGKVTTVGFQNAIIAAGSQATKFPGAP-DDERIMDSTGALALADIPKRLLViggg  303
            A    ++     ++++ I+A GS +  + + P D+ RI+ ST AL L ++P++L+V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  304  iigLEMGTVYDALGSKVSVVEFMDGLIPGCDRDLIRPLQKRMEKRFESIMLSTKVAKIDA  363
             IGLE+GT Y  +G+KV+++E  D +++G D  L + +++++     +++  + V   + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  364  KKDGIHVSFEGENAPKEAQVYDRVLVSIGRRPNGKNIGAENAGVAVDDRGFIAVDKQMRT  423
              D ++V  + +      Q  D  LVSIGR+PN  +IG EN GV +DD+GFI ++++ +T
Sbjct  278  TGDEVNVHVQVDGKEEIIQ-CDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  424  NVPHIFAIGDIVGQPMLAHKATHEAKVAAEVIAGHK--VEFQALVIPSVAYTDPEVAWAG  481
            N+ H++AIGD  G  +LAHKA+ EAK+AAEVI+G++  ++FQA+  P V ++DPEVA +G
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAM--PFVIFSDPEVAYTG  394

Query  482  MTETEAKAKGIEIEKASFPWAASGRALSIARTEGATKLIFDKETHRvigagivgvnagEL  541
            +TE EAK KG E   + FP  A++RALS++ ++G  +++ +K+T RV+G  +VG + + L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  542  LAEAVLAIEMGADAHDLGLTIHAHPTLSETI  572
            +AEAV+AIE GA+A+DL+LTIHAHPTL+E +
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

533) lpd in NC_014733


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1008),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 188/451 (42%), Positives = 315/451 (70%), Gaps = 10/451 (2%)

Query  126  EVVVLGSGPGGYTAAFRAADLGKKVVLIERYSTLGGVCLNVGCIPSKALLHTAKVITEAE  185
            +++V+G+G+GGY AA+RAA+LGKKVVL+++ + LGGVCLN GCIPSKAL+ ++  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  186  ETSHHGVSFSAP-KVDLDTLRNWKANDVVGKLTGGLAAMAKQRGVTVVQGVGKFTSSHQI  244
            +++  G+  S+  +VD+  + +WK +++V KLT+G+ ++ K  GV V+ G   + +  +I
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWK-DGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  245  AVTAADGKVTTVGFQNAIIAAGSQATKFPGAP-DDERIMDSTGALALADIPKRLLViggg  303
            A    ++     ++++ I+A GS +  + + P D+ RI+ ST AL L ++P++L+V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  304  iigLEMGTVYDALGSKVSVVEFMDGLIPGCDRDLIRPLQKRMEKRFESIMLSTKVAKIDA  363
             IGLE+GT Y  +G+KV+++E  D +++G D  L + +++++     +++  + V   + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  364  KKDGIHVSFEGENAPKEAQVYDRVLVSIGRRPNGKNIGAENAGVAVDDRGFIAVDKQMRT  423
              D ++V  + +      Q  D  LVSIGR+PN  +IG EN GV +DD+GFI ++++ +T
Sbjct  278  TGDEVNVHVQVDGKEEIIQ-CDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  424  NVPHIFAIGDIVGQPMLAHKATHEAKVAAEVIAGHK--VEFQALVIPSVAYTDPEVAWAG  481
            N+ H++AIGD  G  +LAHKA+ EAK+AAEVI+G++  ++FQA+  P V ++DPEVA +G
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAM--PFVIFSDPEVAYTG  394

Query  482  MTETEAKAKGIEIEKASFPWAASGRALSIARTEGATKLIFDKETHRvigagivgvnagEL  541
            +TE EAK KG E   + FP  A++RALS++ ++G  +++ +K+T RV+G  +VG + + L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  542  LAEAVLAIEMGADAHDLGLTIHAHPTLSETI  572
            +AEAV+AIE GA+A+DL+LTIHAHPTL+E +
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

534) A1C_04135 in NC_009881


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  270 bits (1009),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 189/465 (41%), Positives = 327/465 (71%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVVCVEKNDTLGGTCLNIGCIPSKALLNSSEKYEEAL  64
            DL+VIG+G++GY ++IRAAQLG KVV V+K + LGG CLN GCIPSKAL+++SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFESIG--ITADVKLDLQKMIANKDKVVSDLTKGIESLFAKNKITRIKGEAKIIASNIV  122
            KH +++G  ++++V++D+  ++  KD +V+ LT GI +L+  N +  I GEA +  ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NNEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPETLIVVGGGY  178
             +   ++EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+ L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTRVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEGGKSAVVTSDVILMAVGRKAYTQNLGLESVGIITDKQGRIEINDRF  294
            +E  ++ VN+ ++ +GK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKAKGINYKVGKFPFLANSRARAIGSTEGLVKILADSKTDRVLGAHIIGANAGTL  414
             TE + K KG +   ++FPF AN+RA +++ ++G+V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRSINM  459
            IAE    +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

535) MASE_14015 in NC_018632


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1007),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 180/449 (41%), Positives = 308/449 (69%), Gaps = 9/449 (2%)

Query  7    QLVVLGGGPGGYSAAFRAADLGIETVIVDSRDTLGGVCLNVGCIPSKALLHVAKVMKEAK  66
            +L+V+G+G+GGY AA+RAA+LG   V+VD +  LGGVCLN GCIPSKAL+  +  +K+ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HLASHGVSF-GEPTIDLDKIREYKDGVVKQLTNGLSGMSKMRKTKHVQGFGKFTGANTLE  125
            H  + G+   GE  +D+  +   KDG+V++LT+G+  + K      + G + +T A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VKNGDDVTTITFEKAIIAAGSEPVSLPFIP-EDDRVIDSTGALEMKDIPEKMLVLGGGII  184
            +K  D+   +++   I+A GS PV L  +P ++ R+I ST AL+++++P+ ++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEMGTVYEALGSNIDVVEFLDQLIPAADKDIMKVFMKDYKD-KFNIMLETKVTAVEAKD  243
            GLE+GT Y  +G+++ ++E  D +++++D  + K   ++ K+  + ++ ++ V + E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  DGLYVTFEGKNAPAEPVRYDKVLVAVGRKPNGKLVGADAAGVNVDERGFINVDKQMRTNV  303
            D + V  +  ++  E ++ D  LV++GRKPN   +G +  GV +D++GFI+++++ +TN+
Sbjct  280  DEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  304  DHIFAIGDLVGQPMLAHKAVHEGHVAAEVIAGQKHYFDPRAIPSVAYTEPEVAWVGLTEK  363
            +H++AIGD  G  +LAHKA  E+ +AAEVI+GQ+  +D +A+P V +++PEVA  GLTEK
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  364  EAKEQGVSYETAT--FPWAASGRAIASDATNGMTKMIFEKETGRVIGGAMVGTNAGEMLG  421
            EAKE+G  YET +  FP  A++RA++   ++G  +++ EK+T RV+G  MVG + + +++
Sbjct  399  EAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  EIGLAIEMGADAEDVALTIHAHPTLNESI  450
            E  +AIE GA+AED++LTIHAHPTL E++
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

536) AMBAS45_14535 in NC_018679


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1007),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 180/449 (41%), Positives = 308/449 (69%), Gaps = 9/449 (2%)

Query  7    QLVVLGGGPGGYSAAFRAADLGIETVIVDSRDTLGGVCLNVGCIPSKALLHVAKVMKEAK  66
            +L+V+G+G+GGY AA+RAA+LG   V+VD +  LGGVCLN GCIPSKAL+  +  +K+ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HLASHGVSF-GEPTIDLDKIREYKDGVVKQLTNGLSGMSKMRKTKHVQGFGKFTGANTLE  125
            H  + G+   GE  +D+  +   KDG+V++LT+G+  + K      + G + +T A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VKNGDDVTTITFEKAIIAAGSEPVSLPFIP-EDDRVIDSTGALEMKDIPEKMLVLGGGII  184
            +K  D+   +++   I+A GS PV L  +P ++ R+I ST AL+++++P+ ++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEMGTVYEALGSNIDVVEFLDQLIPAADKDIMKVFMKDYKD-KFNIMLETKVTAVEAKD  243
            GLE+GT Y  +G+++ ++E  D +++++D  + K   ++ K+  + ++ ++ V + E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  DGLYVTFEGKNAPAEPVRYDKVLVAVGRKPNGKLVGADAAGVNVDERGFINVDKQMRTNV  303
            D + V  +  ++  E ++ D  LV++GRKPN   +G +  GV +D++GFI+++++ +TN+
Sbjct  280  DEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  304  DHIFAIGDLVGQPMLAHKAVHEGHVAAEVIAGQKHYFDPRAIPSVAYTEPEVAWVGLTEK  363
            +H++AIGD  G  +LAHKA  E+ +AAEVI+GQ+  +D +A+P V +++PEVA  GLTEK
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  364  EAKEQGVSYETAT--FPWAASGRAIASDATNGMTKMIFEKETGRVIGGAMVGTNAGEMLG  421
            EAKE+G  YET +  FP  A++RA++   ++G  +++ EK+T RV+G  MVG + + +++
Sbjct  399  EAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  EIGLAIEMGADAEDVALTIHAHPTLNESI  450
            E  +AIE GA+AED++LTIHAHPTL E++
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

537) AMEC673_14340 in NC_018678


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1007),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 180/449 (41%), Positives = 308/449 (69%), Gaps = 9/449 (2%)

Query  7    QLVVLGGGPGGYSAAFRAADLGIETVIVDSRDTLGGVCLNVGCIPSKALLHVAKVMKEAK  66
            +L+V+G+G+GGY AA+RAA+LG   V+VD +  LGGVCLN GCIPSKAL+  +  +K+ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HLASHGVSF-GEPTIDLDKIREYKDGVVKQLTNGLSGMSKMRKTKHVQGFGKFTGANTLE  125
            H  + G+   GE  +D+  +   KDG+V++LT+G+  + K      + G + +T A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VKNGDDVTTITFEKAIIAAGSEPVSLPFIP-EDDRVIDSTGALEMKDIPEKMLVLGGGII  184
            +K  D+   +++   I+A GS PV L  +P ++ R+I ST AL+++++P+ ++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEMGTVYEALGSNIDVVEFLDQLIPAADKDIMKVFMKDYKD-KFNIMLETKVTAVEAKD  243
            GLE+GT Y  +G+++ ++E  D +++++D  + K   ++ K+  + ++ ++ V + E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  DGLYVTFEGKNAPAEPVRYDKVLVAVGRKPNGKLVGADAAGVNVDERGFINVDKQMRTNV  303
            D + V  +  ++  E ++ D  LV++GRKPN   +G +  GV +D++GFI+++++ +TN+
Sbjct  280  DEVNVHVQV-DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  304  DHIFAIGDLVGQPMLAHKAVHEGHVAAEVIAGQKHYFDPRAIPSVAYTEPEVAWVGLTEK  363
            +H++AIGD  G  +LAHKA  E+ +AAEVI+GQ+  +D +A+P V +++PEVA  GLTEK
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  364  EAKEQGVSYETAT--FPWAASGRAIASDATNGMTKMIFEKETGRVIGGAMVGTNAGEMLG  421
            EAKE+G  YET +  FP  A++RA++   ++G  +++ EK+T RV+G  MVG + + +++
Sbjct  399  EAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  EIGLAIEMGADAEDVALTIHAHPTLNESI  450
            E  +AIE GA+AED++LTIHAHPTL E++
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

538) Deipr_2271 in NC_015169


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1005),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 202/466 (44%), Positives = 318/466 (69%), Gaps = 9/466 (1%)

Query  5    DVLVIGGGPAGYVAAIRAAQLGFKVACVDAFERDGKASLGGTCLNVGCIPSKAMLDSSEK  64
            D+LVIG+G++GYVAAIRAAQLG KV  VD      KA LGG CLN GCIPSKA++ +SE+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD------KAELGGVCLNRGCIPSKALISASER  94

Query  65   YEMIQTEAEEHGIHVQGA-SVDVSKMLSRKNGVVDKLTGGIAYLFKKNKIQSFHGLGRLV  123
               I+ +A+  G+ V G   VD++ ++ +K+G+V+KLT+GI  L+K N ++ + G + L 
Sbjct  95   VKHIK-HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  124  RQDEGGWVVDAAGTEVVARHVIVATGSNPRELPIAPFGG-HVVENSGALSFEAVPGKLGV  182
              + +   ++        +++I+A GS P EL   PF+  +++ ++ AL ++ VP  L V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  183  IGAGVIGLELGSVWRRLGAEVTILEALPGFLMAADDAVSKEALKQFKKQGLDFHFGVNIS  242
            +G+G IGLELG+   ++GA VTILE+   +L ++D  ++K   +++K  G+    +  + 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  243  RVEQDDSGVTVTYAEGDQEVTARFDKLIVSIGRVPNTQGLGAENVGLELDERGFVRVDSH  302
              E+ +  V V    +++E   + D  +VSIGR PNT  +G EN+G+ LD++GF+++++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  YRTNLPGVYAIGDVIGGAMLAHKAEEEGVALAEMLAGQAGHVAYDAIPWVIYTSPEIAWA  362
             +TN+  VYAIGD  GG +LAHKA  E+   AE+++GQ + + ++A+P VI++ PE+A +
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GLTEKAAKEQGLSVKTGQFPFSANGRALGHGDPRGFVKVVADAGTDKILGVHMIGANVSE  422
            GLTEK AKE+G    +++FPF AN+RAL+ +D+ GFV+VVA+  T ++LGV+M+G++VS 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  LIAEVVAIMEFGGSAEDLARTIHAHPTlaevvkeaalavDGRALHM  468
            LIAE V  +E G++AEDL+ TIHAHPTL+E + EAA +V G+A HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

539) lpd in NC_013861


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1006),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 197/476 (42%), Positives = 330/476 (70%), Gaps = 7/476 (1%)

Query  1    MANQIK--TDVIVLGSGPGGYTAAFRAADLGKKVVLVERYDSLGGVCLNVGCIPSKALLH  58
            M+ ++K   D++V+G+G+GGY AA+RAA+LGKKVVLV++   LGGVCLN GCIPSKAL+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALIS  90

Query  59   IAKVVDEAHEMSEQGVTF-GKPKLDNKKIVTWKNSVVSKLTGGLKALSKQRKVEVLTGVG  117
             +  V +  + +  G+   G  ++D   +V WK+++V+KLT+G+++L K   VEV++G +
Sbjct  91   ASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  118  KFSGTHQVTVTTKDGAVEVTFENAIIAVGSESINLPFIP-EDKRIFSSTGALELADIKGS  176
             ++ +H   +   D     ++ + I+A+GS +++L  +P ++KRI+SST AL+L ++   
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  177  llvlgggiiglEMATVYSSLGVDVTVVEFMDQLIPGADSDLVNVLQKRMQkkgvklllkt  236
            L+V+GGG IGLE++T Y+ +G  VT++E  D +++G+D+ L + ++++++  G+ ++  +
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  237  kvtAVEAKKDGIYVSMEGDHATDKPLCFQQVLVSVGRKPNGGMIDAEKAGVKVDERGFIK  296
             V + E   D + V ++ D   +   C +  LVS+GRKPN G I+ E+ GV +D++GFIK
Sbjct  271  LVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  297  VDNQQRTNVSHIFAIGDVVGQPMLAHKAIPEGKIAAEVIAGKKHYFDPKCIASVAYTDPE  356
            ++N+ +TN+ H++AIGD  G  +LAHKA  E+KIAAEVI+G++  +D + ++ V ++DPE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  357  LAWTGLTEKEAKEKNIRYEKASFPWAASGRALSMGREEGMTKLLFCPDTKRILGAGIVGV  416
            +A TGLTEKEAKEK      + FP  A++RALS++  +G  +++   +TKR+LG  +VG 
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  417  NAGDLIAETSLAIEMCCDVEDIALTIHPHPTLSETVAQAAEAFEGTITDLYLPKKK  472
            + + LIAE+ +AIE   + ED++LTIH+HPTL+E + +AAE+  G  T++ L KK+
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

540) lpdA in NC_002977


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1005),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 195/465 (42%), Positives = 317/465 (69%), Gaps = 2/465 (0%)

Query  10   DVLVLGGGPGGYTAAFRAADLGRQVVLVERYPTLGGVCLNVGCIPSKALLHVAQIIHEAR  69
            D+LV+G+G+GGY AA+RAA+LG++VVLV++ + LGGVCLN GCIPSKAL+  ++ + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  70   EAGEFGLRF-GAPEIDLDQIRGFKDKVVKTLTGGLETLARQRKVTVVQGTGRFTGEHGMQ  128
            +A   GL+  G  ++D+ ++   KD +V+ LT+G+ TL +   V V+ G + +T  H  +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  129  VETTDGPVTVGFDHAIIAAGSRAVKIPDFPHDDPRLMDSTDALALQEVPKRllivgggii  188
            +   D     ++ + I+A GS +V +   P D+ R++ ST+AL LQEVP++L++VGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  189  glEMATVYHALGAGITVVELMDQLIPGCDADLVRPLHQHIKKQYENIYLKTRVSRIEPEA  248
            GLE++T Y  +GA +T++E  D +++G D+ L + + +H+K     +   + V   E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  249  AGLKVFFEGEGAPESDLFDRVLVAVGRAPNGALIGAENAGVHVDAKGFIPVDEHQRTNVP  308
              ++V  + +G  E    D  LV++GR PN + IG EN GV +D +GFI +++  +TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  309  HIYAIGDIVGNPMLAHKATHEAKVAAEVIAGKPSAFQALTIPSVAYTDPEVAWMGVTEAQ  368
            H+YAIGD  G  +LAHKA+ EAK+AAEVI+G+ S ++  ++P V ++DPEVA  G+TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  369  AKAQGIEYEKAVFPWAASGRALGIGRKEGATKLLCDKTTKRVIGAGIVGPHAGELIAEAV  428
            AK +G E   + FP  A++RAL+++  +G  +++ +K TKRV+G  +VGP+ + LIAEAV
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  429  LAMEMGADAEDIGLTVHAHPTLSETFAFAAEMIEGTITDLYIRKR  473
            +A+E GA+AED++LT+HAHPTL+E +  AAE + G  T++  +K+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

541) L483_24365 in NC_021491


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1006),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 190/458 (42%), Positives = 305/458 (67%), Gaps = 21/458 (4%)

Query  16   PGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQTSRFAGPSDLG  75
            +GGYVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+  +  +   ++ +G
Sbjct  49   SGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH---ANTMG  105

Query  76   ISVASP-RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVIHGWAKVLDGK----QVEVD  130
            + V++  ++D+ + V WKDGIV++LT G+ +LLK +GV VI G A + ++     ++E +
Sbjct  106  LKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDE  165

Query  131  GQRIQCEHLLLATGSSSVELPMLPLGG-PLISSTEALAPTALPQHLVVVGGGYIGLELGI  189
             Q +   +L+LA GS +VEL  +P++   +ISSTEAL    +P+HLVVVGGGYIGLELG 
Sbjct  166  EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGT  225

Query  190  AYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDG  249
            AY K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++  +  V+G EN    + D 
Sbjct  226  AYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN----TGDE  281

Query  250  KGGQLRLEADQV-------LVAVGRRPRTQGFNLECLDLKMNGAA-IAIDERCQTSMHNV  301
               ++++++ +        LV++GR+P T  + LE +++ +++ + I I+++CQT++++V
Sbjct  282  VNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHV  341

Query  302  WAIGDVAGEPMLAHRAMAQGEMVAEIVAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQAS  361
             AIGD AG  +LAH+A  ++ + AE+++G+   ++  A++ V F+DPEV   G T  +A 
Sbjct  342  YAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAK  401

Query  362  QQGLDCIVAHFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQS  421
            ++G + + ++FPF AN+RA+S+    GFV+VVA ++   +LG Q VG  VS L +    +
Sbjct  402  EKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFA  461

Query  422  LEMGACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            +E GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  462  IEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

542) pdhD in NC_007205


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1006),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 187/459 (41%), Positives = 304/459 (67%), Gaps = 4/459 (0%)

Query  8    VVIGGGPGGYVCAIRLAQLGLKTACIESRGSLGGTCLNVGCIPSKNLLNISENYHKAQNF  67
            +VIG+G+GGYV AIR AQLG K   +  ++ LGG CLN GCIPSK L++ SE     ++ 
Sbjct  43   LVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   SKLGIEV-GEVKLNLQKMMQNKDKAVTILTKGVEFLFKKNKVTYFKGTGSFKSANKISIL  126
            + +G+ V GEV++++  +++ KD  V  LT G+  L+K N V  + G  ++ +   I+ +
Sbjct  102  NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAKI  160

Query  127  DDQKKETIIETDKTVISTGSVPVALPGIEFDEKIIVSSTGALTLETVPKKMVVVGGGYIG  186
              +  E I+     +++ GS+PV L ++ FD+K I+SST AL L+ VP+ +VVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  187  LEMGSVWSRLGAEVHVVEFLEHITPSMDREISTEFMKILKKQGINFHMQTKVEGIKKNAN  246
            LE+G+  +++GA V ++E  + I ++ D  ++    + LK  GI    ++ V+G  + ++
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  247  GAIVSTSDKDGKKADFDCDVVLISVGRKPNTTNLNLEAIGVELDEKKRIKTDKTFQTNVK  306
               V   + DGK   ++CD  L+S+GRKPNT ++ LE IGV LD++  IK ++  QTN+ 
Sbjct  281  EVNVHV-QVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  307  NVYAIGDVIDGPMLAHKAEDEGIAVAENIAGQSGHVNYDIIPGVVYTTPEVASIGKTEEQ  366
            +VYAIGD  +G +LAHKA  E+   AE I+GQ++ ++++ +P V+++ PEVA  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  367  LKEANTKYKIGKFSFMANSRAKAIDEAEGFVKILADEKTDRVLGAHIIGPHAGELIGEIG  426
             KE       ++F+F AN+RA ++ +A+GFV+++A+ +T RVLG +++GP+ + LI+E  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  427  VAMEFGASAEDIARTCHAHPTFSEAVKEAALSVDKRAIH  465
             A+E GA+AED++ T HAHPT++E++ EAA +V  +A H
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

543) Rh054_04095 in NC_015866


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1005),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 189/465 (41%), Positives = 324/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTIIEYTPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVTI+E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEGGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ +GK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYHLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IASLTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

544) lpdA2 in NC_016050


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1006),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 190/465 (41%), Positives = 324/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTIIEYTPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVTI+E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEGGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ +GK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYHLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IASLTAYMEFGAAAEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA AED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

545) Lbys_3490 in NC_014655


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1004),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 200/454 (45%), Positives = 319/454 (71%), Gaps = 9/454 (1%)

Query  4    DVIVIGSGPGGYVAAIRCAQLGFKTAIVEKYPVMGGTCLNVGCIPSKALLDSSEHFYNAV  63
            D++VIG+G+GGYVAAIR AQLG K  +V+K + +GG CLN GCIPSKAL+ +SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERV-KHI  98

Query  64   HHFEEHGI-TTGKVKADLSKMVERKGGVVKKMNDGINFLMKKNKVDVKYGFGSFL-DKNT  121
             H +  G+  +G V+ D++ +V +K+G+V+K+ DGI  L+K N V+V  G  ++L + + 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  122  VKVKKEDGSEEQIQG-KNIIIATGSKPTILPFMNYDKTRIITSTEALSLKELPKHLIVIG  180
             K+K ED  EEQI + K++I+A GS P  L  M +D+ RII+STEAL L+E+P+HL+V+G
Sbjct  158  AKIKIED--EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  181  AGVIGAELGSVYARLGSKVTFVEFADSMIPTMDKALGKELQKSIKKLGAEFHFSTKVTLI  240
            +G IG ELG+ YA++G+KVT++E +D++++  D  L K +++ +K +G      + V   
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  241  ENLGKEVKVTAENKAGEKVEITGDYCLVSIGRRPYTDNLNLEAVGVATEKGRVLVDEHTL  300
            EN G EV+V  +  + E + I  DYCLVSIGR+P T+++ LE +GV  +    +  ++  
Sbjct  276  ENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  301  QTNVPNIYAIGDVVRGAMLAHKaeeegvlvaevlagQKPHINYNLIPGVVYTWPEVAAVG  360
            QTN+ ++YAIGD   G +LAHKA  E+ + AEV++GQ++ I+++ +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  361  KTEDELKAAGIAYKSGQFPFKALGRATASGDVDGFVKVLADKSSDEILGVHIIGARAADM  420
             TE E K  G    S++FPF+A +RA + +D DGFV+V+A+K++  +LGV+++G+  + +
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  421  ISEAVIAMEFRASAEDIARSSHAHPTYTEAIKEA  454
            I+EAV+A+E  A+AED++ + HAHPT  E++ EA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

546) lpd in NC_009445


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1005),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 195/464 (43%), Positives = 310/464 (67%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIKVSAP-EVDLPSMMNFKQQGIDGNVKGVEFLMKKNKIDVLQGKGKILGTGKV  123
            H+   MG+KVS+  +VD+P +++ K+  ++    G+  L+K N ++V+ G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  QVTGNDGAAQTVETKNIVIATGSDIARLKGIEIDEKRIVSSTGALALDKVPSSLLVVGAG  183
                 ++  Q    K++++A GS    LK++ +D+KRI+SST AL L+ VP+ L+VVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAKVTVVEFLDRILPGMDLEIAKQFQRILEKQGFAFKLGAKVTGVDT  243
             IGLELG+   ++GAKVT++E  D IL+G D  ++K  +R L   G++   +A V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGAKLSATIEPAAGGAAEKIDADVVLVAIGRVPYTDGLGLQEAGVALDNRGRVQIDHHFA  303
            +G  ++  ++   +G  E I+ D  LV+IGR P T+ +GL++ GV LD++G ++I++   
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSVPGVYAIGDVVAGPMLAHKAEDEGVACAEILAGQAGHVNYDVIPGVVYTTPEVASVGK  363
            T++  VYAIGD  +G +LAHKA  E+   AE+++GQ + ++++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEDELKQAGIVYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGAHIIGREAGEMI  423
            TE E K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLG +++G E + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

547) Hneap_1554 in NC_013422


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1006),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 187/466 (41%), Positives = 313/466 (68%), Gaps = 3/466 (0%)

Query  124  DVVVLGAGPGGYTAAFRAADLGKKVILIERFEKIGGVCLNVGCIPSKALLHVSGILNETR  183
            D++V+GAG+GGY AA+RAA+LGKKV+L+++   +GGVCLN GCIPSKAL+  S  +++ +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  184  EMGSHGITFA-EPKIDLDGLRGFKNGVIDKLTGGLKQLAKQRKVTILHGVGHFASANHIR  242
            +  + G+  + E ++D+  +   K+G+++KLT+G++ L K   V ++ G + ++ A+  +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  243  ITAADGSQSTVQFEHAIIAAGSQPVKLPFIPHDDHRVIDSTGALELADIPKRMLiigggi  302
            I   D  Q    + + I+A GS PV L  +P D+ R+I ST AL+L ++P++++++GGG 
Sbjct  160  IKIEDEEQ-IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  303  igLEMAQVYASLGSKITIVELADNIIPGADKDLVRPLLKDIKKRYENIYLGSKVTGVTAT  362
            IGLE++  YA +G+K+TI+E +D I++G+D  L + + +++K     +  ++ V G   T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  363  ADGLDVTFEGKSAPATDRFDRILVAVGRAPNGRKLNLEAAGVTVDQRGFIPVDARMQTNV  422
            +D ++V  +  +     + D  LV++GR PN  K+ LE  GV +D++GFI ++ + QTN+
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  423  PHIFAIGDIVGQPMLAHKAVHEGKVAAEVICGMKSAFTPITIPSVAYTDPEIAWAGKTED  482
             H++AIGD  G  +LAHKA  E+K+AAEVI G +S +   ++P V ++DPE+A +G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  483  QLKEEGIAYEKGAFPWAASGRSLSIGRDEGLTKALFCAETHRLLGVGIVGPNAGELIAEA  542
            + KE G     + FP  A++R+LS++  +G+ + +   +T R+LGV +VGP+ + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  543  VLAMEMGADMSDIALTIHPHPTLSETLGFAAEMAEGTITDLLPPKK  588
            V+A+E GA+  D++LTIH+HPTL+E L  AAE   G  T++L  K+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

548) MCC_04805 in NC_017042


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  269 bits (1004),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 188/465 (41%), Positives = 325/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEEAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEISTQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVNSGKVNLTIEEGGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ +GK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

549) PputW619_3745 in NC_010501


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  268 bits (1002),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 191/451 (43%), Positives = 297/451 (66%), Gaps = 13/451 (2%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQTSRYTEPSELGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+  +  +   ++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH---ANTMGLKV  108

Query  79   STP-RLDIGRSVAWKDGIVDRLTTGVAALLKKHGVKVIHGWAKILDGK----HVDVDGQR  133
            S   ++D+   V WKDGIV++LT G+ +LLK +GV VI G A + ++      ++ + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSNSVELPMLPLGG-PIISSTEALAPQTLPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   IISSTEAL  Q +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIAV---HLGHSVEGYDSGCLLARDA  249
            K+GA+V+++E+ + IL+  D+ LT  V   LK +GI+V    L ++ E  +    +  + 
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV  288

Query  250  QGAQLRLEADRVLVAVGRRPRTQGFNLESLELKMNGAA-IAIDERCQTSMRNVWAIGDVA  308
            +G +  ++ D  LV++GR+P T  + LE++ + +++ + I I+++CQT++ +V AIGD A
Sbjct  289  DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCA  348

Query  309  GEPMLAHRAMAQGEMVAEIIAGKARRFEPCAIAAVCFTDPEVVVVGKTPEQASQQGLDCI  368
            G  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G + +
Sbjct  349  GGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETV  408

Query  369  VAQFPFAANGRAMSLESKTGFVRVVARRDNHVILGWQAVGVAVSELSTAFAQSLEMGARL  428
             ++FPF AN+RA+S+    GFV+VVA ++   +LG Q VG  VS L +    ++E GA  
Sbjct  409  SSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANA  468

Query  429  EDIAGTIHAHPTLGEAVQEAALRALGHALHI  459
            ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  469  EDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

550) Nham_0537 in NC_007964


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  268 bits (1002),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 197/480 (42%), Positives = 313/480 (66%), Gaps = 8/480 (1%)

Query  4    LPDDNTRFE-TMATY-DLIVIGTGPGGYVCAIRAAQFGMKVAVVEKNPTLGGTCLNVGCM  61
            L+ +++R    +  Y DL+VIG+G+GGYV AIRAAQ+G KV +V+K + LGG CLN GC+
Sbjct  25   LSKEESRMTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCI  83

Query  62   PSKALLHASEMFEEAGHSFAKMGIGVSAP-RLDLAAMMNFKQQGIDGNVKGVEFLMKKNK  120
            PSKAL+ ASE   +  H+   MG+ VS+  ++D++ +++ K+  ++    G+  L+K N 
Sbjct  84   PSKALISASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNG  142

Query  121  IDVISGTGRILGAGKVEVTGNDGKKQTLETKNIVIATGSDVAKLKDIEIDEKRIVSSTGA  180
            ++VISG +  L  + +     ++  Q +  K++++A GS    LK + +D+KRI+SST A
Sbjct  143  VEVISGEA-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEA  201

Query  181  LSLAKVPGKLLIVGAGVIGLELGSVWHRLGAQVTVVEFLDRILPGMDGEVAKQFQRMLEK  240
            L L  VP  L++VG+G IGLELG+   ++GA+VT++E  D IL+G D  ++K  +R L  
Sbjct  202  LQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKE  261

Query  241  QGFAFKLGAKVTGVDTSGKTLTAKVEPAAGGAAETIEADVVLVAIGRTPYTDGLGLKEAG  300
             G++   +A V G + +G  +   V+   +G  E I+ D  LV+IGR P T+ +GL + G
Sbjct  262  IGITVITDALVQGGENTGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIG  319

Query  301  VALDDRGRVEIDAHFATNVKGVYAIGDVVAGPMLAHKAEDEGVACAEILAGQAGHVNYDV  360
            V LDD+G + I+    TN+  VYAIGD  +G +LAHKA  E+   AE+++GQ + ++++ 
Sbjct  320  VVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQA  379

Query  361  IPGVIYTTPEVSSVGKTEEELKQAGTAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTD  420
            +P VI++ PEV+  G TE E K+ G     ++FPF AN+R+     +DGFV+++A+ +T 
Sbjct  380  MPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTK  439

Query  421  RVLGVHIIGREAGEMIHEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM  480
            RVLGV+++G E + +I EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  440  RVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

551) MCE_05475 in NC_017028


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  268 bits (1002),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 187/465 (41%), Positives = 325/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSNTLGGTCLNIGCIPSKVLLNSSEKYEEAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSK L+++SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKIISSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA +  ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIAKQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGRVNLTIEEGGKGAVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ +GK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADNKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+++T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

552) I633_15470 in NC_021716


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  268 bits (1001),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 183/451 (41%), Positives = 308/451 (69%), Gaps = 13/451 (2%)

Query  7    QLVVLGGGPGGYSAAFRAADLGIETVIVDSRDTLGGVCLNVGCIPSKALLHVAKVMKEAK  66
            +L+V+G+G+GGY AA+RAA+LG   V+VD +  LGGVCLN GCIPSKAL+  +  +K+ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HLASHGVSF-GEPTIDLDKIREYKDSVVSQLTNGLGGMSKMRKTKHVQGYGKFTGANTLE  125
            H  + G+   GE  +D+  +   KD++V++LT+G+  + K      + G + +T A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VKNGDDVTTITFEKAIIAAGSEPVSLPFIP-EDDRVIDSTGALEMKDIPEKMLVLGGGII  184
            +K  D+   +++   I+A GS PV L  +P ++ R+I ST AL+++++P+ ++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEMGTVYEALGSKIDVVEFLDQLIPAADKDIMKVFMKDYKD-KFNIMLETKVTAVEAKD  243
            GLE+GT Y  +G+K+ ++E  D +++++D  + K   ++ K+  + ++ ++ V + E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  D--GLYVTFEGKKAPAEPVRYDKVLVAVGRKPNGKLVGADAAGVNVDDRGFINVDKQMRT  301
            D   + V  +GK    E ++ D  LV++GRKPN   +G +  GV +DD+GFI+++++ +T
Sbjct  280  DEVNVHVQVDGK---EEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  302  NVDHIFAIGDLVGQPMLAHKAVHEGHVAAEVIAGQKHYFDPRAIPSVAYTEPEVAWVGLT  361
            N++H++AIGD  G  +LAHKA  E+ +AAEVI+GQ+  +D +A+P V +++PEVA  GLT
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  EKEAKEQGVSYETAT--FPWAASGRAIASDATNGMTKMIFEKETGRVIGGAMVGTNAGEM  419
            EKEAKE+G  YET +  FP  A++RA++   ++G  +++ EK+T RV+G  MVG + + +
Sbjct  397  EKEAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  420  LGEIGLAIEMGADAEDVALTIHAHPTLNESI  450
            ++E  +AIE GA+AED++LTIHAHPTL E++
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

553) lpdA2 in NC_009900


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  268 bits (1001),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 188/465 (41%), Positives = 325/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEEAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEISTQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEGGKSSVITSDIVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ +GK  +I  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KE+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

554) lpdA in NC_005861


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (999),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 187/455 (42%), Positives = 312/455 (69%), Gaps = 6/455 (1%)

Query  3    EIKKF-DVAVLGGGPGGYPAAIRAAQRGKSVALIEAKELGGTCLNRGCIPSKALIAGAEV  61
            E+KK+ D+ V+G+G+GGY AAIRAAQ GK V L++  ELGG CLNRGCIPSKALI+++E 
Sbjct  35   EVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER  94

Query  62   VDRIHEAKEFGIHV-GEVNIDYAQLAFHKDRVIERMRKGLEGLMATNKITVFKGFGQFIS  120
            V +I +A+  G+ V GEV++D +++   KD +++++  G+  L+  N + V+ G + +  
Sbjct  95   VKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  121  PREIKIKGQDNTSI-TADQIIIATGSEPRNISAFPFDYERIHDSTSLLAMKTLPEKLIIV  179
            ++  KIK +D+  I +  ++I+A GS P ++ + PFD  RI  ST  L ++ +P+ L++V
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  180  GGGVIGCEFASLYATLGVHVTILELLPRLISSEAIEVSQALTKAFIKRGIQVETGVKVQK  239
            GGG IG E+++ YA +G  VTILE    ++S+    +++++ + +   GI V T+  VQ 
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  240  IEQVEMGIQVQVE-EGKHYVADC--CLVAVGRSLNTKNIGLDKAGILVQENGMIAVNDKM  296
             E+    ++V+V+ +GK+ + +C  CLV++GR  NT +IGL++ G++++++G I +N+K 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  297  QTNVDGIYAVGDIASKWWLAHVASHQGLIAADQICGKSSRMYYHAIPSVIFTHPEIATVG  356
            QTN++ +YA+GD A+   LAH AS ++ IAA+ I G++S + ++A+P VIF++PE+A  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  357  LSLEEATKRGYKAKLASFPFQALGKSQAALQAEGFAQIVVEEKSGQILGAQVVGYEASVM  416
            L+  EA  +GY +  + FPFQA +++ +  +A+GF Q+V E ++ ++LG Q+VG E S +
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  417  IAEMTLAIANELTVECVAETIHAHPTLPEAWLESA  451
            IAE  +AI      E ++ TIHAHPTLPE+ +E+A
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

555) lpdV in NC_008027


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (998),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 189/451 (42%), Positives = 300/451 (67%), Gaps = 13/451 (2%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+     ++ +++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  79   ASP-RLDISRSVEWKDGIVDRLTSGVAALLKKHGVKVIHGWAKILDGK----SVEVDGQR  133
            ++  ++D++  V WKDGIV++LT G+ +LLK +GV VI G A + ++      +E + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSSSVELPMLPIGG-PIISSTEALVPKALPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   IISSTEAL  + +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAKVSVVEARERILPTYDAELTAPVADSINKLGIALY---LGHSVEGYTDGCLLASDG  249
            K+GAKV+++E+ + IL+  D+ LT  V   ++ +GI++    L ++ E   D   +  + 
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV  288

Query  250  QGGQLRLEADQVLVAVGRRPRTKGFGLEGLDLKMNGAA-IAIDERCQTSMRNVWAIGDVA  308
            +G +  ++ D  LV++GR+P T  +GLE +++ +++ + I I+++CQT++ +V AIGD A
Sbjct  289  DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCA  348

Query  309  GEPMLAHRAMAQGEMVAEIIAGKARRFEPSAIAAVCFTDPEVVVVGKTPEQVKQEGVDCL  368
            G  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  + K+ G + +
Sbjct  349  GGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETV  408

Query  369  VAQFPFAANGRAMSLESKSGFVRVVARRDNHLIMGWQAVGVAVSELSTAFAQSLEMGARL  428
             ++FPF AN+RA+S+    GFV+VVA ++   ++G Q VG  VS L +    ++E GA  
Sbjct  409  SSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANA  468

Query  429  EDIAGTIHAHPTLGEAVQEAALRALGHALHI  459
            ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  469  EDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

556) PputGB1_3965 in NC_010322


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (999),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 188/455 (42%), Positives = 304/455 (67%), Gaps = 21/455 (4%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+     ++ +++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  79   ASP-RLDIGQSVAWKDGIVDRLTSGVAALLKKHGVKVVHGWAKVLDGK----QVEVDGQR  133
            ++  ++D+ + V WKDGIV++LT G+ +LLK +GV V+ G A + ++     ++E + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSSSVELPMLPLGG-PVISSTEALAPKALPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   +ISSTEAL  + +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGG  252
            K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++  +  V+G EN    + D    
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN----TGDEVNV  284

Query  253  QLRLEADQV-------LVAVGRRPRTQGFNLECLALKMNGAA-IAIDERCQTSMHNVWAI  304
            ++++++ +        LV++GR+P T  + LE +++ +++ + I I+++CQT++++V AI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  305  GDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQG  364
            GD AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  365  LDCIVAQFPFAANGRAMSLEAKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEM  424
             + + ++FPF AN+RA+S+    GFV+VVA ++   +LG Q VG  VS L +    ++E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  425  GACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

557) Rsph17025_0074 in NC_009428


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (998),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 190/453 (42%), Positives = 306/453 (68%), Gaps = 9/453 (1%)

Query  5    DVIIIGAGPGGYVSAIRCAQLGLKTAVVEGRDTLGGTCLNVGCIPSKALLHATHNLHEVH  64
            D+++IGAG+GGYV+AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ A++ + ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   ENFEKMGL-MGGHPTVDWPKMQAYKQDVVDGNTKGIEFLFKKNKITWLKGWGSIPEP--G  121
            +  + MGL ++G+  VD P +   K+++V+  T GI  L+K N +  + G + + E+  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDE--IHEAKSIVIATGSEPASLPGVEVDEKIVVTSTGALNLDRIPETMVVIGAGV  179
            K+K+ DE  I   K +++A GS P  L ++  D+K +++ST AL+L+ +P+ +VV+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYARLGAKVTVVEYMDKIIPGADGEIIKGFQRILARQGLEFVLGAAVQGVTVQ  239
            IGLELG+ YA++GAKVT++E  D I++G+D  + K  +R L   G+  + +A VQG   +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG--E  276

Query  240  DGKATVTWKANKDGKDSSLTADTVLVATGRKPFTEGLGLEALGVEMLPRGMVKIDDHFRT  299
            +    V    + DGK+  +  D  LV+ GRKP T  +GLE +GV +  +G +KI++  +T
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NVPGLYAIGDCVPGAMLAHKAEDEGMAVAEILAGKHGHVNYGVIPGVIYTTPEVASVGQT  359
            N+  +YAIGDC  G +LAHKA  E+   AE+++G+++ +++  +P VI++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EEMLKEAGRAYKVGKFPFMGNARAKAVFQAEGFVKLLADKETDRILGCHIIGPAAGDLIH  419
            E   KE G     ++FPF +NARA +V +A+GFV+++A+K+T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EVCVAMEFGASSQDLALTCHAHPTWSEAVREAA  452
            E   A+E GA+++DL+LT HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

558) lpdG in NC_016603


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (999),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 192/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVSHEGETQVLEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E Q++  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALAKDYQKLLTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEINGREVTVKYTQGGEEKTQTFDKLIVCVGRKAYAEGLLADDSGIKLTERGLVEVND  304
             G E  G EV V    +G E     D  +V +GRK+ +  +  ++ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

559) lpdA2 in NC_012633


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (998),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 188/465 (41%), Positives = 323/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKVLLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSK L+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--IIADVKLDLQKMLANKDKVVLDLTQGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  + ++V++D+  ++  KD +V  LT+GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSIIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

560) MC1_04350 in NC_017044


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (998),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 188/465 (41%), Positives = 323/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKVLLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSK L+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--IIADVKLDLQKMLANKDKVVLDLTQGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  + ++V++D+  ++  KD +V  LT+GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSIIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

561) bglu_2g02670 in NC_012721


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (1000),  Expect = 8e-73, Method: Compositional matrix adjust.
 Identities = 202/462 (44%), Positives = 311/462 (68%), Gaps = 9/462 (1%)

Query  9    LLVIGAGPGGYVAAIRAAQLGVPTVVVERAQPGGTCLNIGCIPSKALIHAADEFDKARHY  68
            LLVIGAG+GGYVAAIRAAQLG   V+V++A+ GG CLN GCIPSKALI A+   ++ +H 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS---ERVKHI  98

Query  69   SGASPLGIRVASP-EIDIARTVAWKDGIVAKLTGGVAALLARHGVELVRGDARVLDGKTV  127
              A+ +G++V++  ++D++  V WKDGIV KLT+G+ +LL  +GVE++ G+A + ++   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  128  EVVRDAARPLRIRCEHLLLAAGSEPVALPSMPFGGI-VQSSTEALSPATLPRRLVVVGAG  186
             +  +    + +   +L+LA GS PV L SMPF+   + SSTEAL    +P +LVVVG+G
Sbjct  159  KIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  187  YIGLELAIAYRKLGAEVSVVEAQERILPAYDaaltkpvaaalaRLGITLQLGRKVLGLNP  246
            YIGLEL+ AY K+GA V+++E+ + IL++ D+ LTK V   L  +GIT+  +  V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  247  AGDAVRVQ-DAAGAETALPADRVLVAVGRRPRTQGWGLEALQLDRAGHAL-KVDDQCRTS  304
            +GD V V+ +  G E  +  D  LV++GR+P T   GLE + +   ++++ K++++C+T+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  MRNVWAIGDLAGEPMLAHRAMAQGEMVAEIVSGKRRRFMPAAIPAICFTDPEVVSVGlap  364
            + +V AIGD AG  +LAH+A  ++ + AE++SG+   +   A+P + F+DPEV   GL+ 
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  hdaaapadalvaS-FPLMANGRAMTIEGTDGFVRVVARRDNHLILGWQAVGRGVSELAAA  423
             +A   +   V+S FP+ AN+RA+++ ++DGFV+VVA ++   +LG Q VG  VS L A 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  424  FSQSIEMGARLEDVGGTIHAHPTLGEAVQEAALRALGHALHV  465
               +IE GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

562) lpdV in NC_017530


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (1000),  Expect = 8e-73, Method: Compositional matrix adjust.
 Identities = 187/455 (42%), Positives = 305/455 (68%), Gaps = 21/455 (4%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+     ++ +++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  79   ASP-RLDIGQSVTWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGK----QVEVDGQR  133
            ++  ++D+ + V WKDGIV++LT G+ +LLK +GV V+ G A + ++     ++E + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSSSVELPMLPLGG-PVISSTEALAPKTLPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   +ISSTEAL  + +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLASDGKGG  252
            K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++  +  V+G EN    ++D    
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN----TGDEVNV  284

Query  253  QLRLEADQV-------LVAVGRRPRTKGFNLECLDLKMNGAA-IAIDERCHTSMHNVWAI  304
            ++++++ +        LV++GR+P T  + LE +++ +++ + I I+++C+T++++V AI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  305  GDVAGEPMLAHRAMAQGEMVAEIIAGKTRRFEPAAIAAVCFTDPEVVVVGKTPEQASQQG  364
            GD AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  365  LDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEM  424
             + + ++FPF AN+RA+S+    GFV+VVA ++   +LG Q VG  VS L +    ++E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  425  GARLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

563) MADE_1014970 in NC_011138


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (1000),  Expect = 8e-73, Method: Compositional matrix adjust.
 Identities = 183/451 (41%), Positives = 307/451 (69%), Gaps = 13/451 (2%)

Query  7    QLVVLGGGPGGYSAAFRAADLGIETVIVDSRDTLGGVCLNVGCIPSKALLHVAKVMKEAK  66
            +L+V+G+G+GGY AA+RAA+LG   V+VD +  LGGVCLN GCIPSKAL+  +  +K+ K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HLANHGVTF-GEPTIDLDKIREYKDSVVSQLTNGLGGMSKMRKTKHVQGYGKFTGANTLE  125
            H    G+   GE  +D+  +   KD++V++LT+G+  + K      + G + +T A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  126  VKNGDDVTTITFEKAIIAAGSEPVSLPFIP-EDDRVIDSTGALEMKDIPEKMLVLGGGII  184
            +K  D+   +++   I+A GS PV L  +P ++ R+I ST AL+++++P+ ++V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  185  GLEMGTVYEALGSKIDVVEFLDQLIPAADKDIMKVFMKDYKD-KFNIMLETKVTAVEAKD  243
            GLE+GT Y  +G+K+ ++E  D +++++D  + K   ++ K+  + ++ ++ V + E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  D--GLYVTFEGKKAPAEPVRYDKVLVAVGRKPNGKLVGADAAGVNVDDRGFINVDKQMRT  301
            D   + V  +GK    E ++ D  LV++GRKPN   +G +  GV +DD+GFI+++++ +T
Sbjct  280  DEVNVHVQVDGK---EEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  302  NVDHIFAIGDLVGQPMLAHKAVHEGHVAAEVIAGQKHYFDPRAIPSVAYTEPEVAWVGLT  361
            N++H++AIGD  G  +LAHKA  E+ +AAEVI+GQ+  +D +A+P V +++PEVA  GLT
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  EKEAKEQGVSYETAT--FPWAASGRAIASDATNGMTKMIFEKETGRVIGGAMVGTNAGEM  419
            EKEAKE+G  YET +  FP  A++RA++   ++G  +++ EK+T RV+G  MVG + + +
Sbjct  397  EKEAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  420  LGEIGLAIEMGADAEDVALTIHAHPTLNESI  450
            ++E  +AIE GA+AED++LTIHAHPTL E++
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

564) Mmc1_2397 in NC_008576


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (999),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 187/463 (41%), Positives = 312/463 (68%), Gaps = 6/463 (1%)

Query  6    DLVVIGGGPGGYVAAIRAAQLGLKTACIDKRPTLGGTCLNVGCIPSKALLQSSHQLETAQ  65
            DL+VIG+G+GGYVAAIRAAQLG K   +DK + LGG CLN GCIPSKAL+ +S+++   +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HAMAAHGVEIKG-VKANLTTMMQRKQEVVQGLTQGIAFLFKKNKVTHLMGSGTIVDSSHV  124
            HA  + G+ + G V+ ++  ++++K+ +V+ LT+GI  L+K N V +++++ + +  +H+
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGV-EVISGEAYLTEAHI  157

Query  125  QVTAADGSVQTLTTENILIASGSEVATLPGLEIDEKHIISSTGALALDKVPKKMVVIGAG  184
                 ++  Q ++  ++++A GS    L ++ +D+K+IISST AL L+ VP+ +VV+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  185  VIGLELGSVWRRLGAEVTVVEFLDGILPGMDGEIRKTAQRTLSKQGMHFKLGTKVTAASV  244
             IGLELG+   ++GA VT++E  D IL+G D  + KT +R L   G+    ++ V ++  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  LKNGVKLTMEPVKGGEAEERQADVVLVAVGRRPYTQGLGLENIGVTLDERGFIPVDHDRQ  304
              + V++ ++   +G  E  Q D  LV++GR+P T  +GLENIGV LD++GFI +++  Q
Sbjct  278  TGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  305  TTCAGVFAIGDVIGGAMLAHKAEEEGSAVAEALAGQVAHVNYDAIPAVVYTHPEIASVGQ  364
            T    V+AIGD  GG +LAHKA  E+   AE ++GQ + ++++A+P V++++PE+A  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  365  SEESLTAAGIPYKVGKFPFMANSRARAIGDAEGFVKILAHATSDAILGAHIIGPAAGDLI  424
            +E      G     ++FPF AN+RA +++DA+GFV+++A+  +  +LG +++GP  + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  425  AEIVLAMECDISAEDIARTCHAHPGLGEAVKEAALAVDKRAIH  467
            AE V+A+E + +AED++ T HAHP L E++ EAA +V  +A H
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498


 Score = 29.5 bits (92),  Expect = 0.48, Method: Compositional matrix adjust.
 Identities = 12/72 (17%), Positives = 40/72 (56%), Gaps = 3/72 (4%)

Query  379  GKFPFMANSRARAIGDAEGFVKILAHATSDAILGAHIIGPAAGDLIAEIVLAMECDISAE  438
            ++++++++  +R  G+   +V +L  +++    G+ + +  A++L   +VL    ++++ 
Sbjct  20   SNYSYLSKEESRMTGEVKKYVDLLVIGAGS---GGYVAAIRAAQLGKKVVLVDKAELGGV  76

Query  439  DIARTCHAHPGL  450
             + R C +  +L
Sbjct  77   CLNRGCIPSKAL  88

565) RPR_05390 in NC_012730


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  267 bits (999),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 187/465 (41%), Positives = 324/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  ISLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            I+LELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

566) lpd in NC_010400


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (996),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 194/472 (42%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQINYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + I+++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADEKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

567) lpdA in NC_011586


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (995),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 316/472 (67%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQAGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V     G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

568) lpdA in NC_011595


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (995),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 316/472 (67%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQAGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V     G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

569) ACICU_02953 in NC_010611


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

570) lpd in NC_010410


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (995),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 316/472 (67%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQAGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V     G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

571) BJAB07104_03037 in NC_021726


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

572) BJAB0715_03081 in NC_021733


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (995),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 316/472 (67%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQAGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V     G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

573) BJAB0868_02921 in NC_021729


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

574) lpd in NC_020547


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (995),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 316/472 (67%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQAGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V     G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

575) ABTJ_00758 in NC_017847


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

576) M3Q_3186 in NC_018706


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

577) M3Q_3313 in NC_018706


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  304
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

578) RSA_04265 in NC_016930


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (996),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 318/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAA  449
            IA     +E GA +ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

579) lpdA2 in NC_016639


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (996),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 188/465 (41%), Positives = 323/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKVLLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSK L+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSLVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

580) MC3_04300 in NC_017065


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (996),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 188/465 (41%), Positives = 323/465 (70%), Gaps = 16/465 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKVLLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSK L+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSLVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAISNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT I ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM  459
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V  ++ +M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

581) PSEBR_a3381 in NC_015379


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (993),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 185/439 (43%), Positives = 290/439 (67%), Gaps = 11/439 (2%)

Query  22   YVAAIRAGQLGISTILVEGQALGGTCLNIGCIPSKALIHVAEQFHQTRHHSQGSALGITV  81
            YVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+    +H  +++++G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  82   AAPT-LDIGKSVEWKDGIVDRLTTGVAALLKKHKVQVIHGWAKVIDGK----TVEVGDTR  136
            ++   +D+   V WKDGIV++LT G+ +LLK + V+VI G A + ++      +E  +  
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  137  IQCEHLLLATGSKSVNLPMLPVGG-PIISSTEALAPTSVPKHLVVVGGGYIGLELGIAYR  195
            +   +L+LA GS +V+L  +P +   IISSTEAL    VP+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  196  KLGAEVSVVEAQERILPAYDGELTQPVHEALKQLGVKLYLKHSVEGFDAQASTLQVR-DP  254
            K+GA V+++E+ + IL++ D  LT+ V   LK++G+ +     V+G +  +  ++V+ + 
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV  288

Query  255  DGETLNLDTDRVLVAVGRKPNTQGWNLEALDLAMNGSAL-KIDNRCQTSMRNVWAIGDLS  313
            DG    ++ D  LV++GRKPNT    LE +++ +++ ++ KI+N+CQT++ +V AIGD +
Sbjct  289  DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCA  348

Query  314  GEPMLAHRAMAQGEMVAELIAGQHREFNPTAIAAVCFTDPELVVVGKTPDEAKAAGLDCI  373
            G  +LAH+A  ++ + AE+I+GQ+  ++  A++ V F+DPE+   G T  EAK  G + +
Sbjct  349  GGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETV  408

Query  374  VSSFPFAANGRAMTLESKSGFVRVVARRDNHLIVGWQAVGVGVSELSTAFGQSLEMGARL  433
             S FPF AN+RA+++    GFV+VVA ++   ++G Q VG  VS L +    ++E GA  
Sbjct  409  SSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANA  468

Query  434  EDIAGTIHAHPTLGEAVQE  452
            ED++ TIHAHPTL E++ E
Sbjct  469  EDLSLTIHAHPTLPEPLME  487

582) Isop_0046 in NC_014962


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (993),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 204/488 (42%), Positives = 330/488 (68%), Gaps = 19/488 (3%)

Query  3    QSSPSTATGGRY-DLIVIGGGPGGYVAAIRAAQLGLKVACVEKRSTLGGTCLNIGCIPSK  61
            + S  T+   +Y DL+VIG+G+GGYVAAIRAAQLG KV  V+K + LGG CLN GCIPSK
Sbjct  28   EESRMTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSK  86

Query  62   ALLDSSE-LYHLAHHRFQRHGIKFA-NVELDLGAMMGRKDEVVTQLTRGIEGLFKKNKVA  119
            AL+ +SE + H+ H   +  G+K + +V++D+  ++ +KD +V +LT GI  L+K N V 
Sbjct  87   ALISASERVKHIKHA--NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE  144

Query  120  WLHGFGRLASPTTVAVKAADGVETFHEAGHILLATGSEPTELPFLKFDGHTVVSSTEALA  179
             + G + L+ +    +K  D  + F    +++LA GS P EL  + FD   ++SSTEAL 
Sbjct  145  VISGEAYLTEAHIAKIKIEDEEQIF-SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQ  203

Query  180  FDRVPDHLVIVGGGYIGLELGSVWKRLGSKVTVLEFLPRIVPFADHEIADHLLRSLKKLG  239
            ++ VP+HLV+VGGGYIGLELG+   ++G+KVT+LE    I++ +D  ++  + R LK +G
Sbjct  204  LQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIG  263

Query  240  LEFHLETKVTGALISNGANANGSGVPPAAVVLAESKSGEKLEFPCDKVLVSVGRRPYLDG  299
            +     T +T+AL+ +G++  G  V     V  +  + E + + CD  LVS+GR+P  + 
Sbjct  264  I-----TVITDALV-QGGENTGDEVN----VHVQVDGKEEI-IQCDYCLVSIGRKPNTGK  312

Query  300  LGLAEIGVEYDPKSGKVKTDSHFRTNIPTISALGDLIDGPMLAHKAEEEGVAFAELLAGK  359
            +GL +IGV  D + G +K ++  +TNI  + A+GD  +G +LAHKA  E+   AE+++G+
Sbjct  313  IGLENIGVVLDDQ-GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQ  371

Query  360  PGHINYDTIPAVIYTWPEMASVGINEQQARERGYDLAIGKFPFTANGRAKAMDETEGLVK  419
             + I+++++P VI++ PE+A  G+ E++A+E+GY+   ++FPF AN+RA ++ +++G+V+
Sbjct  372  NSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQ  431

Query  420  IIADAKTDRVLGVHIIGPRASDMIAEAVAVMEFGGTAEDIARTCHAHPTLSEAFKEAALA  479
            ++A+ +T RVLGV+++GP  S +IAEAV  +E G+ AED++ T HAHPTL+E++ EAA +
Sbjct  432  VVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEG  491

Query  480  VDRRAIHI  487
            V  +A H+
Sbjct  492  VMGHATHM  499

583) ABK1_3007 in NC_017162


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (993),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  10   DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  69
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  70   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  128
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  129  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  188
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  189  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  248
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  249  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  308
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  309  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  368
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  369  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  428
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  429  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  480
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

584) ABZJ_03132 in NC_017171


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (993),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  10   DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  69
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  70   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  128
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  129  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  188
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  189  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  248
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  249  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  308
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  309  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  368
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  369  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  428
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  429  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  480
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

585) ABTW07_3176 in NC_017387


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (993),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  10   DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  69
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  70   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  128
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  129  agkkVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  188
            +   +  +  E+E QI+  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  189  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRIGAKV  248
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  249  SGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLVEVND  308
             G E  G EV V    +G +     D  +V +GRK+ +  +  E+ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  309  HCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  368
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  369  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  428
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  429  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  480
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

586) lpdA1 in NC_020908


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  266 bits (993),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 185/453 (41%), Positives = 305/453 (68%), Gaps = 9/453 (1%)

Query  5    DVIIIGSGPGGYVCAIRCAQLGLKTAVVEGRDTLGGTCLNVGCIPSKALLHASHMLHEAQ  64
            D+++IG+G+GGYV AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ AS+ + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFAAMGLKGKTQ-SVDWKQMLSYKDDVIATNTKGIEFLFKKNKIDWIKGWGSIPEA--G  121
            H   +MGLK   +  VD  +++  KD+++   T GI  L+K N ++ I G + + EA  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDD--VHDAKNIIVASGSEVSSLKGVEIDEKTVVSSTGALELGKIPKDLIVIGAGV  179
            K+K+ D+  +   K++I+A GS    LK++ +D+K ++SST AL+L  +P++L+V+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYSRLGSKVTVIEYLNEITPGMDGEVQKAFQRLLKKQGLEFVMGAAVQSVDTK  239
            IGLELG+ Y+++G+KVT++E  + I +G D  + K+ +R LK  G+  + +A VQ+ +  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  NNKATVTYKLRSDDSERTMDADTVLVATGRRPFTDGLGLAELGVEISERGQIKTDAHYQT  299
             +   V   ++ D+ E  ++ D  LV+ GR+P T+ +GL ++GV + ++G IK +   QT
Sbjct  279  GDEVNV--HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NVAGIYALGDCIDGPMLAHKAEDEGMACAEGLAGQKPHVNYGVIPGVIYTHPEVANVGKT  359
            N+  +YA+GDC +G +LAHKA  E+   AE ++GQ++ +++  +P VI+++PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EEQLKEDGVDYKIGKFSFMGNGRAKANFAGDGFVKILADKTTDRILGAHIIGPMAGDLIH  419
            E + KE G +   ++F+F +N+RA +   +DGFV+++A+K T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EICVAMEFGAAAEDLARTCHAHPTYSEAVREAA  452
            E   A+E GA AEDL+ T HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

587) FB2170_12491 in NC_014472


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 192/453 (43%), Positives = 310/453 (69%), Gaps = 4/453 (0%)

Query  5    DVAVIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYEDAV  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFEDHGIEIPGEIKVNLQKMIARKQGVVDMTTKGIQFLMDKNKIDVYEGLGSFKDATHI  124
            KH +  G+ ++GE++V++  ++ +K+G+V+  T GI+ L+  N ++V  G  ++   +HI
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  125  NIAKNDGETETIEAKKTIIATGSKPSTLPFITLDKERVITSTEALKLNEIPKHMiviggg  184
               K ++E + +  K  I+A GS P  L  + +D+ R+I+STEAL+L+E+P+H++V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  185  vigLELGQVYKRLGADVSVVEFMDRIIPTMDAGLSKELMKSMKKQKVKFHLSHKVKSVER  244
             IGLELG  Y ++GA V+++E  D I++  D+ L+K + + +K   +       V++ E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  KGDEVIVKADNKKGEEVTLKGDYCLVSVGRRPFTDGLNAEAAGVKLDDRGRVEVNNHLQT  304
             GDEV V  +    EE+ ++ DYCLVS+GR+P T+ +  E  GV LDD+G + +NN  QT
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  305  NVPNIFAIGDVVRGAMLAHKAEEEGTMVAEYMAGQKPHIDYNLIPGVVYTWPEVAAVGKT  364
            N+ +++AIGD   G +LAHKA  E+ + AE ++GQ++ ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  365  EEELKEAGINYKTGQFPMRALGRSRASMDVDGFVKILADATTDEVLGVHMIGARCADLIS  424
            E E KE G +  +++FP +A +R+ +  D DGFV+++A+  T  VLGV+M+G+  + LI+
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  425  EAVTAMEFRASAEDIARMSHAHPTYSEAVKEAA  457
            EAV A+E  A+AED++   HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

588) Swit_0779 in NC_009511


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (991),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 197/464 (43%), Positives = 299/464 (65%), Gaps = 18/464 (3%)

Query  13   VLVLgggpggYVAAIRAGQLGLDTVLVEAGRLGGTCLIRGCIPSKALIHaaeqyaamaga  72
            +LV+G+G+GGYVAAIRA+QLG   VLV+ + LGG CL RGCIPSKALI        +   
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALI---SASERVKHI  98

Query  73   ataPRLGISLASPPSLDFAATIGWKDGVVDRLNGGVAALLKRAKVRVIAGHGRFSDARTC  132
              A  +G+ +++   +D +  + WKDG+V++L +G+ +LLK   V VI+G++ +++A+  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  133  HVATAEGGAVTVQAEHIVLATGSEPIELPFLPFGGK-VISSTEALSLPAVPKRLAIVGAG  191
             +   +   +     +++LA GS P+EL  +PF+ K +ISSTEAL L  VP++L +VG+G
Sbjct  159  KIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  192  YIGLELGIAYRKLGAEVTVVEAADRILPLYDAKLVEPVRRWLDRHGVALHLSARATGQGR  251
            YIGLELG AY K+GA VT++E++D IL+  D+ L   V+R L   G+++   A   G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  252  DG----LLVETAGGEAIELPADNILVTVGRRPVTRGWGLEEMAVAMDG-AFVAVDDRCAT  306
             G    + V+  G E I +  D  LV++GR+P T   GLE+++V +D+ +F+ ++++C T
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  307  ATRNVWAIGDLVGEPMLAHKASAQGAMVAEIIAGRKRRFDPRAIPAVCFTEPEIVSVGQG  366
               +V AIGD  G  +LAHKAS ++ + AE+I+G++  +D +A+P V F++PE+   G  
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  367  PDAP-----GTITGVFPFAANGRALSMEAGDAGGFVRVVALEAGHRIVGVQAVGLHVSEL  421
               +      T+++ FPF AN+RALS+  +DA+GFV+VVA     R++GVQ VG +VS L
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSV--SDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  422  SAAFAQAIETGAVLEDVEGIIHAHPTLGEAFHEAALKAMGHAIH  465
             A    AIE+GA  ED+   IHAHPTL E++ EAA   MGHA H
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

589) GM18_3645 in NC_014973


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (991),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 190/456 (42%), Positives = 312/456 (69%), Gaps = 10/456 (2%)

Query  7    DLIVIGAGPGGYVAAIRGAQLGMRVAVVEKRGSLGGVCLNEGCIPSKALLDSSELYHLAR  66
            DL+VIGAG+GGYVAAIR+AQLG +V +V+K + LGGVCLN GCIPSKAL+ +SE     +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HRFAAHGIEVPAPT-LNLGQMMARKDDVVKKLTDGIAFLFKKNKVTSFLGAATMLSPGKD  125
            H   + G+ V++   +++ +++ +KD++V+KLTDGI  L+K N V  + G A +      
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-----T  153

Query  126  GTHRVQVQGEEKKEIAG-KKVILATGSDAVELPSLPFDGESVVSAREALSFSSVPEHLLV  184
             +H  +++ E+  +I + K +ILA GS +VEL S+PFD   ++S+ EAL +  VP+HL+V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  185  VGGGYIGLELGSVWLRLGAKVTVVEMLPRLVAGSDGQVAEALMRSLKKQGMSFMTGAKVT  244
            VGGGYIGLELG+   ++GAKVT++E    +++G+D  ++ ++ R LK  G++ +T+A V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  245  GVEKKQGKLSARIEAEGEAREVSCDKMLVAVGRRPLTAGLNLEGLGMQMDG-SCIRVDAD  303
            G E+  + ++ +++ +G    + CD  LV++GR+P T+ + LE +G+ +D+ + I+++  
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  304  YATSVPGIYAIGDLIAGPMLAHKAMEEGAVCVERMHGEPSQVDYGCIPGVCYTWPEAASV  363
              T++  +YAIGD  +G +LAHKA  E+ +  E + G+ S +D+  +P V ++ PE A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  364  GKTEEALKEEGIAYKSGKFSFIANGRAKCMDETEGFVKlltetgggrllgVHILGPRASD  423
            G TE   KE G    S++F+F AN+RA  + +++GFV++++E    R+LGV+++GP  S 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  424  MIAEAVTVMSFGGSGEDIALTMHAHPTLSETMKEAA  459
            +IAEAV  +  G+++ED++LT+HAHPTL+E + EAA
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

590) AOLE_03725 in NC_014259


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 192/472 (41%), Positives = 317/472 (68%), Gaps = 9/472 (1%)

Query  6    DLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALLDSSHR  65
            DL+VIG+G+GGY AAIRAAQLG KV  ++K      + LGG CLN GCIPSKAL+ +S+R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK------AELGGVCLNRGCIPSKALISASER  94

Query  66   YEDTVHHLADHGIT-TGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWlkgtgkll  124
              + + H    G+  +GEV+ D++ ++ +KD IV++LT+GI  LLKGNG+E + +    L
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYL  152

Query  125  agkkVEFVSHEGETQVLEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVPKRLG  184
            +   +  +  E+E Q++  K +ILA GS+PV++   P DQ  I+ ST AL++ EVP++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALAKDYQKLLTKQGLDIRIGAKV  244
            V+G+G IGLELG+   ++GA V ++E+ D++L+ +D  L+K  ++ L   G+ +  +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  AGTEVNGREVTVKYTQGGEEKTQTFDKLIVCVGRKAYAEGLLADDSGIKLTERGLVEVND  304
             G E  G EV V    +G E     D  +V +GRK+ +  +  ++ G+ L ++G++ +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  305  YCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHPEAAW  364
             C T++E VYAIGD   G +LAHKA  E+ +A E I G+ + ++++++  VI+++PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  365  VGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIGPAAS  424
             GLTE +AKEKG E  +++F F  N+RAL+ +++ GFV+ VA+ +T R+LG++++GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  425  DIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKR  476
             ++ ++++A+E  ++ EDL L   +HPT++E + EAA +V G+A H +++K+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

591) YSA_07988 in NC_017986


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 305/455 (68%), Gaps = 21/455 (4%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+     ++ +++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  79   ASP-RLDIGQSVTWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGK----QVEVDGQR  133
            ++  ++D+ + V WKDGIV++LT G+ +LLK +GV V+ G A + ++     ++E + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSTSVELPMLPLGG-PVISSTEALAPKALPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   +ISSTEAL  + +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLASDGKGG  252
            K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++  +  V+G EN    ++D    
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN----TGDEVNV  284

Query  253  QLRLEADQV-------LVAVGRRPRTKGFNLECLDLKMNGTA-IAIDERCHTSMHNVWAI  304
            ++++++ +        LV++GR+P T  + LE +++ +++ + I I+++C+T++++V AI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  305  GDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQG  364
            GD AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  365  LDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLIVGWQAVGVAVSELSTAFAQSLEM  424
             + + ++FPF AN+RA+S+    GFV+VVA ++   ++G Q VG  VS L +    ++E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  425  GACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

592) RPO_04325 in NC_016909


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 318/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAA  449
            IA     +E GA +ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

593) RPL_04305 in NC_016908


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 318/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAA  449
            IA     +E GA +ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

594) RPM_04295 in NC_016911


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 318/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAA  449
            IA     +E GA +ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

595) RPJ_04280 in NC_016914


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 318/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAA  449
            IA     +E GA +ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

596) RPK_02220 in NC_016915


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 318/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAA  449
            IA     +E GA +ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

597) RrIowa_0912 in NC_010263


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 318/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ DGK  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAA  449
            IA     +E GA +ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

598) lpdA1 in NC_017025


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (990),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 192/445 (44%), Positives = 312/445 (71%), Gaps = 5/445 (1%)

Query  5    DVTIIGSGPGGYVSAIRCAQLGFKTAIIEKYPTLGGTCLNVGCIPSKALLASSHHYEELQ  64
            D+ +IG+G+GGYV+AIR AQLG K  +++K + LGG CLN GCIPSKAL+++S++  +++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HFADHGIEVSGDVKVNLTKMIERKQAVVDQTSGGVKFLMDKNNVTVFEGVGSFESATSVK  124
            H    G+ VSG+V+V++  ++ +K+++V++ ++G++ L+  N V V+ G  ++ + + + 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  ITKNDGSTEIIESKNIIIATGSKPSSLPFITIDKERIITSTEALKLKEVPKHLviigggv  184
              K ++  +I+  K++I+A GS P  L  + +D+ RII+STEAL+L+EVP+HLV++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  igiELGQVYLRLGAQVSVVEFMDRIIPGMDAALSKELTKVLKKQGMKFYTSHKVQSVERN  244
            IG+ELG  Y ++GA+V+++E  D I++G D+ L+K + + LK  G+   T   VQ+ E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDAVVVKAE-NAKGEIITLEGDYSLVSVGRKPYTEGLNAEKAGVKLTDRGQVEVNDHLQT  303
            GD V V  + ++K EII  + DY LVS+GRKP T  +  E+ GV L D+G + +N+  QT
Sbjct  279  GDEVNVHVQVDGKEEII--QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  SVSNIYAIGDVVRGAMLAHKAEEEGVLVAEYLAGQKPHIDYNLIPGVVYTWPEVAAVGKT  363
            ++ ++YAIGD   G +LAHKA  E+ + AE ++GQ++ ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEQLKEAGVAYKAGSFPFRALGRARAGGDIDGFVKILADAKTDEVLGVHMIGARCADLIA  423
            E + KE G    ++ FPF+A +RA + +D DGFV+++A+ +T  VLGV+M+G+  + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EAVTAMEFRASAEDISRMSHAHPTF  448
            EAV A+E  A+AED+S   HAHPT+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTL  481

599) Caul_1873 in NC_010338


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (990),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 189/452 (42%), Positives = 294/452 (66%), Gaps = 11/452 (2%)

Query  21   AAIRAGQLGLDTVLVESGRLGGTCLTRGCIPSKALIHAAGLYEEAVLASAEMGRFGIHLN  80
            AAIRA+QLG   VLV+ + LGG CL RGCIPSKALI A+    E V    +    G+ ++
Sbjct  54   AAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERVKHIKHANTMGLKVS  109

Query  81   QAPTLRFDETVGWKDAIVERLSGGVSGLLRKAKVRAMTGWATFSDAKTCTVETAEGFVTI  140
                +   E V WKD+IV++L++G+  LL+   V  ++G A +++A    +   +    +
Sbjct  110  GEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIF  169

Query  141  QAEHVILATGSTAVELPFLPFGG-RVISSTEALCLPEVPATLAVVGGGYIGLELGIAFAK  199
               ++ILA GS +VEL  +PF+  R+ISSTEAL L EVP  L VVGGGYIGLELG A+AK
Sbjct  170  SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAK  229

Query  200  LGSKVTIVEATDRLLPLYDAQLTAPVSRWLEKHGVTVHLGAKALGQDEEG--LLIQTAGG  257
            +G+KVTI+E++D +L+  D+ LT  V R L   G+TV  +A   G ++ G  + ++   +
Sbjct  230  FGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVD  289

Query  258  KSQLVVPAERILVTVGRKPQTEGWGLEQAALAMEGR-FVKVDDRCATSTTNVWAIGDLVG  316
              + ++  +  LV++GRKP+T   GLE+ ++ ++++ F+K++++C T+  +V AIGD  G
Sbjct  290  GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAG  349

Query  317  EPMLAHKASAQGEMVAEIIAGHRRRFDPVAIAAVCFTEPEIVSVGLLPDQAPE-GVETIV  375
              +LAHKAS ++ + AE+I+G+   +D  A++ V F++PE+   GL   +A E G ET+ 
Sbjct  350  GDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVS  409

Query  376  GQFPFQANGRALSMQAGDDGGFVRILARKSDHRILGVQAVGRHCSEFAGEFATLMEMGAV  435
            ++FPFQAN+RALS+  +D +GFV+++A K+  R+LGVQ VG + S + +E    +E GA 
Sbjct  410  SRFPFQANARALSV--SDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGAN  467

Query  436  LEDVAGVIHVHPTLGEAIHESALKALGHAIHI  467
             ED++  IH HPTL E++ E+A   +GHA H+
Sbjct  468  AEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

600) Alvin_0803 in NC_013851


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (992),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 315/470 (68%), Gaps = 13/470 (2%)

Query  111  EVVVLGAGPGGYTAAFRAADLGKKVVLIERYPTLGGVCLNVGCIPSKALLHTAAIMEEVK  170
            +++V+GAG+GGY AA+RAA+LGKKVVL+++ + LGGVCLN GCIPSKAL+ ++  + ++K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  171  TLGVMGVT-YGEPEVDLAKMRAGKDKVVAKLTGGLTALAKQRNVQVVQGAGRFESPNRIG  229
                MG+   GE +VD++ +   KD +V KLT+G+ +L K   V+V+ G + +  ++   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  230  VETKEGRVRVRFDQAIIACGSSPMKIPGFPHEDSRVMDSTDALALADVPDRllivgggii  289
            +   +      + + I+A GS P+ + + P ++ R++ ST+AL L +VP++L++VGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  290  glEMASVYSALGSRIDVVELKNQLMPGCDPDLVKAVEKIIKKRYENIWLETKVASMSAGP  349
            GLE+++ Y+ +G+++ ++E  + +++G DP L K+V + +K    +I +     ++  G 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLK----EIGITVITDALVQGG  275

Query  350  EG------IKVVFEGKHPGTELYDKVLVAVGRLPNGKLIDAEAAGVTVDQHGFIKVDQHQ  403
            E       + V  +GK+   +  D  LV++GR PN   I+ E  GV +D++GFIK+++  
Sbjct  276  ENTGDEVNVHVQVDGKEEIIQ-CDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  404  RTNVPHIFAIGDVVGGPMLAHKATHEAKVAAEVIAGQPSLFDPLTIPSVAYTDPEVAWMG  463
            +TN+ H++AIGD  GG +LAHKA+ EAK+AAEVI+GQ S++D  ++P V ++DPEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  464  LTETQAKADGIPYEKGVFPWAASGRALGIHRDEGMTKLLFDPETKRILGAGIVGPNAGEL  523
            LTE +AK  G     + FP  A++RAL++   +G  +++ + +TKR+LG  +VGP+ + L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  524  IGEAVLALEMGADMEDIGLTIHPHPTLCETIGLAAEMAHGSITDLMPPKK  573
            I+EAV+A+E GA+ ED++LTIH+HPTL E +  AAE   G  T+++  K+
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

601) Rpdx1_0453 in NC_014834


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (991),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 189/464 (41%), Positives = 306/464 (66%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGLKVAVVEKNATLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIGVPAP-KLDLPAMMNFKQQGIDGNVKGVEYLMKKNKIDVLAGRGKILGAGKV  123
            H+   MG+ V++  ++D+P +++ K+  ++    G+  L+K N ++V++G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  EVTGADGKAQTVDTKSIVIASGSAVAQLKGIEIDEKRVVSSTGALSLDKVPGKLIVVGAG  183
                 ++  Q    K +++A GS   +LK++ +D+KR++SST AL L+ VP  L+VVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAEVTVVEFLDRILPGMDAEVVKQFQRILEKQGFAFKLGAKVTGVDS  243
             IGLELG+   ++GA VT++E  D IL+G D+ + K  +R L   G++   +A V G ++
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGAKLAVKVEAAAGGNPETLEADVVLVAIGRVPYTEGLGLKEAGIALDERGRVVIDDHFA  303
            +G  + V V+   +G+ E ++ D  LV+IGR P T  +GL + G+ LD++G + I++   
Sbjct  278  TGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSLKGVYAIGDVVRGPMLAHKAEDEGVAVAELIAGKAGHVNYEVIPGVVYTTPEVSCVGK  363
            T++  VYAIGD   G +LAHKA  E+   AE+I+G+ + ++++ +P V+++ PEV+  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGEMI  423
            TE + K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLGV+++G E + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAIKEAALTVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA  V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

602) A1I_03305 in NC_009883


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (989),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 196/459 (43%), Positives = 319/459 (70%), Gaps = 18/459 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKNDTLGGTCLNIGCIPSKALLNSSEKYEEAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--INAEVKLDLQKMLANKDKVVSDLTKGIDGLFAKNKITRIKGEAKIISSNIV  122
            KH + +G  +++EV++D+  ++  KD +V+ LT GI  L+  N +  I GEA +  ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NGEQI-SAKNILIATGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI S K++++A GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGSKVTVVEYAESIV----PMLDKEVASQFMKLQLKQ-GIEFKLKTKVL  233
            IGLELG+   ++G+KVT++E +++I+    P+L K V     K +LK+ GI     + V 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTV-----KRHLKEIGITVITDALVQ  273

Query  234  SAEVKSGKVNLTIEEEGKSSVITSDVVLMAVGRKAYTQNLGLEAVGIATDKQGRIEINEH  293
            ++E  ++ VN+ ++ +GK  +I  D  L+++GRK+ T ++GLE +G+  D QG I IN+ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  294  FQTVVPNIYAVGDAVKGAMLAHKaeeeaiaaaeiMAGQAGHVNYNLIPSVIYTSPEVASV  353
             QT + ++YA+GD   G +LAHKA  EA  AAE+++GQ + ++++ +P VI++ PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  354  GETEEQLKEKGVSYKVGKFPFLANSRARAVGKTEGMVKILADSKTDKVLGAHIIGADAGT  413
            G TE + KEKG     ++FPF AN+RA +V+ ++G V+++A+ +T +VLG +++G++ ++
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  414  LIAELTAYMEFGAAAEDIARTCHAHPTLSEAIREAALGV  452
            LIAE    +E GA AED++ T HAHPTL+E++ EAA GV
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGV  492

603) lpdA2 in NC_007940


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (989),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 196/459 (43%), Positives = 319/459 (70%), Gaps = 18/459 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKNDTLGGTCLNIGCIPSKALLNSSEKYEEAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--INAEVKLDLQKMLANKDKVVSDLTKGIDGLFAKNKITRIKGEAKIISSNIV  122
            KH + +G  +++EV++D+  ++  KD +V+ LT GI  L+  N +  I GEA +  ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NGEQI-SAKNILIATGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI S K++++A GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGSKVTVVEYAESIV----PMLDKEVASQFMKLQLKQ-GIEFKLKTKVL  233
            IGLELG+   ++G+KVT++E +++I+    P+L K V     K +LK+ GI     + V 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTV-----KRHLKEIGITVITDALVQ  273

Query  234  SAEVKSGKVNLTIEEEGKSSVITSDVVLMAVGRKAYTQNLGLEAVGIATDKQGRIEINEH  293
            ++E  ++ VN+ ++ +GK  +I  D  L+++GRK+ T ++GLE +G+  D QG I IN+ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  294  FQTVVPNIYAVGDAVKGAMLAHKaeeeaiaaaeiMAGQAGHVNYNLIPSVIYTSPEVASV  353
             QT + ++YA+GD   G +LAHKA  EA  AAE+++GQ + ++++ +P VI++ PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  354  GETEEQLKEKGVSYKVGKFPFLANSRARAVGKTEGMVKILADSKTDKVLGAHIIGADAGT  413
            G TE + KEKG     ++FPF AN+RA +V+ ++G V+++A+ +T +VLG +++G++ ++
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  414  LIAELTAYMEFGAAAEDIARTCHAHPTLSEAIREAALGV  452
            LIAE    +E GA AED++ T HAHPTL+E++ EAA GV
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGV  492

604) Nwi_0425 in NC_007406


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (989),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 189/464 (41%), Positives = 311/464 (68%), Gaps = 6/464 (1%)

Query  5    DLIIIGTGPGGYVCAVRAAQLGMKVAVVEKNPTLGGTCLNVGCMPSKALLHASEAFQEAG  64
            DL++IG+G+GGYV A+RAAQLG KV +V+K + LGG CLN GC+PSKAL+ ASE  ++  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFARMGIGVSAP-KLDLSAMMDFKQQGIDGNVKGVEYLMKKNKIDVLRGAGRVVAAGQV  123
            H+   MG+ VS+  ++D++ ++  K+  ++    G+  L+K N ++V+ G +  ++ +++
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  EVTGKDGKIQTAETKNIVIATGSDAAKLKGVEIDEKRIVSSTGALSLDKVPEKLLVVGAG  183
                 ++  Q    K++++A GS +  LK++ +D+KRI+SST AL L+ VP+ L+VVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAQVTVVEFLDRILPGMDGEIAKQFQRILEKQGFAFKLGAKVTGVDT  243
             IGLELG+   ++GA+VT++E  D IL+G D  ++K  +R L   G++   +A V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGKTLSARIEPAAGGAAETIEADVVLVAIGRAPYTNGLGLKEAGVALDDRGRVEIDKHFA  303
            +G  ++ +++   +G  E I+ D  LV+IGR P T  +GL + GV LDD+G + I++   
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSVKGIYAIGDVVRGPMLAHKAADEGVACAEILAGQAGHVNYDVIPGVIYTTPEVSSVGK  363
            T++  +YAIGD   G +LAHKA+ E+   AE+++GQ + ++++ +P VI++ PEV+  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKQAGTAYAVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGELI  423
            TE E K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLGV+++G E + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

605) lpdV in NC_002947


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  265 bits (989),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 305/455 (68%), Gaps = 21/455 (4%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+     ++ +++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  79   ASP-RLDIGQSVTWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGK----QVEVDGQR  133
            ++  ++D+ + V WKDGIV++LT G+ +LLK +GV V+ G A + ++     ++E + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSSSVELPMLPLGG-PVISSTEALAPKTLPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   +ISSTEAL  + +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLASDGKGG  252
            K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++  +  V+G EN    ++D    
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN----TGDEVNV  284

Query  253  QLRLEADQV-------LVAVGRRPRTKGFNLECLDLKMNGAA-IAIDERCHTSMHNVWAI  304
            ++++++ +        LV++GR+P T  + LE +++ +++ + I I+++C+T++++V AI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  305  GDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPTAIAAVCFTDPEVVVVGKTPEQASQQG  364
            GD AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  365  LDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLIVGWQAVGVAVSELSTAFAQSLEM  424
             + + ++FPF AN+RA+S+    GFV+VVA ++   ++G Q VG  VS L +    ++E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  425  GACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

606) Oweho_1797 in NC_016599


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (985),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 194/444 (44%), Positives = 302/444 (69%), Gaps = 4/444 (0%)

Query  5    DVAVIGSGPGGYVAAIRCAQLGFKTAIIEKYSTLGGTCLNVGCIPSKALLDSSEHFHNAL  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KNFDTHGIKINTP-EVDFTQMVDRKQKVVDQTCDGVKFLMGKNKIEVYEGLGSFIDENTI  123
            K+ +T G+K++   +VD  ++V +K+ +V++  DG++ L+  N +EV  G + + + +  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  NIAQKDGDEKIGAKHIIIATGSKPTELPFAKFDKERIISSTEALKLKEVPKTMvvigggv  183
            +I   D ++ ++ K++I+A GS P EL    FD+ RIISSTEAL+L+EVP+ +VV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  igLELGSVYARLGTEVTVVEYMDKIIPTMDAQLGKELMKSLKKLGMKFNVSHKVTDVKRE  243
            IGLELG+ YA++G+ VT++E  D I++  D+ L K + + LK +G+       V +    
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  GDTVTVSAEDKKGKAVSFEAEYCLVSVGRRPYTDGLNLDKAGLTTDDRGRIETNEHLQTA  303
            GD V V  +   GK   ++ +YCLVS+GR+P T+ + L++ G+  DD+G I  N+  QT 
Sbjct  279  GDEVNVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  304  KSHIYAIGDVVKGAMLAHKASEEGTLVAETIAGQKPHIDYNLIPGVVYTWPEVASVGKSE  363
              H+YAIGD   G +LAHKAS E+ + AE I+GQ++ ID++ +P V+++ PEVA  G +E
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  364  EQLKKEGKEVKSGSFPFKALGRARASMDLEGMVKILADKETDEILGVHMIGPRAADLIAE  423
             + K  G E  S+ FPF+A +RA +  D +G V+++A+K+T  +LGV+M+GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  424  AVVAMEYRASADDISRMSHAHPTF  447
            AV A+E  A+A+D+S   HAHPT+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTL  481

607) Runsl_3005 in NC_015703


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (986),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 186/454 (41%), Positives = 315/454 (70%), Gaps = 8/454 (1%)

Query  4    DVIVIGSGPGGYICAIRCAQLGLKTAIIEKYKTLGGTCLNVGCIPSKALLDSSEHYYNAA  63
            D++VIG+G+GGY+ AIR AQLG K  +++K   LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HSFAEHGIKLE-NLKVDLAQMIARKSEVVSQVCKGVEFLMKKNKIDVYQGLGSFVDKNTV  122
            H+    G+K+  +++VD+++++ +K  +V+++  G+  L+K N ++V  G + + + +  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  KVTKEGGDIEMITSQNIVIATGSKPSSLPGVTIDKKRIITSTEALQLNEIPKHLIVIGAG  182
            K+  E+ + ++++ +++++A GS P  L ++ +D+KRII+STEALQL+E+P+HL+V+G+G
Sbjct  159  KIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGAELGSVYARIGAKVSFVEYASAMIPTMDATMGKELQRTVKKLGANFYFSHKVKTVEN  242
             IG ELG+ YA++GAKV+++E + ++++  D+ + K ++R +K +G        V+  EN
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  243  TGEEVIVTAE-NPKGELVTFTGDYCLMSVGRRPYTDGLALENAGLAADQRGKIEVDEHTL  301
            TG+EV V  + + K E++    DYCL+S+GR+P T+ ++LEN G+  D++G I +++   
Sbjct  278  TGDEVNVHVQVDGKEEIIQ--CDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC-  334

Query  302  QTKVPNIYAIGDVIRGAMLAHKAEEEGVFVAETIVGQKPHINYLLIPNVVYTWPEVAGVG  361
            QT++ ++YAIGD   G +LAHKA  E+ + AE I GQ++ I++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  362  YTEDELKAKGIAYKTGSFPFKALGRARASMDIDGTVKVLAHKETDEILGAHIIGPRAADM  421
             TE E K KG    ++ FPF+A +RA +  D DG V+V+A+K+T  +LG +++GP  + +
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  422  IAEAVVAMEYRASAEDVSRMSHAHPTYTEAFKEA  455
            IAEAV A+E  A+AED+S   HAHPT  E++ EA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

608) Pedsa_2463 in NC_015177


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (988),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 202/467 (44%), Positives = 324/467 (70%), Gaps = 10/467 (2%)

Query  4    DVIVIGSGPGGYVAAIRSAQLGLKTAMIEKYATFGGTCLNVGCIPSKALLDSSEHFHNAQ  63
            D++VIG+G+GGYVAAIR+AQLG K  +++K A +GG CLN GCIPSKAL+ +SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HTFAEHGIDVK-DVKVNIKQMIKRKNEVIAQNTAGITFLMKKNKVDTYEGVGSFKDKNTI  122
            H+    G+ V  +V+V++ +++K+K+ ++ + T GI  L+K N V+   G + + + +  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  KIKLTKGGEQEITGKNVIIATGSKPTALPFLPVDKKRIITSTEALSLTEVPKALTviggg  182
            KIK+  + EQ ++ K++I+A GS P  L  +P D+KRII+STEAL L EVP+ L V+GGG
Sbjct  159  KIKI-EDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  viglelgSVYARLGSKVTVVEFADSIIATMDGSLGKELQRVLKKSLGMEFLLSHKVTAAK  242
             IGLELG+ YA++G+KVT++E +D+I++  D  L K ++R LK  +G+  +    V ++ 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLK-EIGITVITDALVQGGE  276

Query  243  NNGKSTTVEA-LDSKGNVVKVEGDYCIVAVGRTAYTEGLGLENIGIKLEERGKKIPVNAQ  301
            N G    V+  +D+K +++  + DYC+V++GR + T  +GLENIG+ L+++G  I +N +
Sbjct  277  NTGDEVNVHVQVDGKEEII--QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKINNK  333

Query  302  LETPVKGVYAIGDVVAGAMLAHKAEEEGVFVVESIAGQKPHINYNLIPGVVYTWPEVASV  361
             +T +  VYAIGD  +G +LAHKA  E+ +  E I+GQ++ I+++ +P V+++ PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  362  GLTEEQLKAEGKKYKTGAFPFKASGRAKASMDTDGFVKVLADAETDEILGVHMIGPRVAD  421
            GLTE + K  G    ++ FPF+A++RA +  D+DGFV+V+A+ +T  +LGV+M+GP V+ 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  422  MIAEAVVAMEFRASAEDIARICHAHPTYTEAFKEAALAATDNRAIHM  468
            +IAEAV A+E  A+AED++   HAHPT  E++ EAA  +   +A HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA-EGVMGHATHM  499

609) Marky_1857 in NC_015387


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (988),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 198/464 (43%), Positives = 309/464 (67%), Gaps = 12/464 (2%)

Query  5    DLVIIGGGPGGYVAAIRAAQLGFDVAVVDENDRLGGTCLRVGCIPSKALLEASYRYYEAK  64
            DL++IG+G+GGYVAAIRAAQLG  V +VD  + LGG CL  GCIPSKAL+ AS R    K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER---VK  96

Query  65   H--HLKAFGVK-PGRVTLDLAAMMKHKDAVVEANTAGIAYLFKKNKITWYQGRGRLLEPG  121
            H  H ++ G+K +G V +D++ ++K KD++V+  T GI  L+K N +    G + L E+ 
Sbjct  97   HIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH  156

Query  122  RLEVQGPEGTETLAADDIVIATGSVPARLKGVEYDGEVIGTSTEALAYEKVPEHLVVIGA  181
               ++  +  + ++  D+++A GS+P  LK++ +D   I +STEAL  + VP+HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  182  GYIGLELGSVWARLGARVTVLEYLDRVLPGMDSELGRKAQRLFEKQGLEFRLGTKVLGAR  241
            GYIGLELG+  A++GA+VT+LE  D +L+G D+ L +  +R +   G+    ++ V G+ 
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  242  VEKGRAV---VEVEGADPIT-ADRVLVAVGRAPNTQGLGLEAVGVETDARGFVVVDEHFQ  297
             + G  V   V+V+G + I   D  LV++GR PNT  +GLE +GV  D +GF+ +++  Q
Sbjct  277  -NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  298  TSVPGIHAIGDVIGGAMLAHKASAEGVALVEYLANGYGAVNYDVIPAAVFTHPEIASVGQ  357
            T++  + AIGD  GG +LAHKAS E+    E ++   + ++++ +P  +F++PE+A  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  358  TEDALKEAGVPYTKGVFPFQASGRARAMNDTEGFVKILAHKETDRILGVHAMGPAAGELI  417
            TE   KE G     + FPFQA++RA +++D++GFV+++A+K+T R+LGV+ +GP  + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  418  HEAAVAMEFGASAEDLARIIHVHPTLSeavkeaaevaGGHPIHI  461
             EA  A+E GA+AEDL+  IH HPTL+E++ EAAE   GH+ H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

610) lpdV in NC_018220


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (988),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 186/455 (41%), Positives = 305/455 (68%), Gaps = 21/455 (4%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+     ++ +++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  79   ASP-RLDIGQSVTWKDGIVDRLTTGVAALLKKHGVKVMHGWAKVLDGK----QVEVDGQR  133
            ++  ++D+ + V WKDGIV++LT G+ +LLK +GV V+ G A + ++     ++E + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSSSVELPMLPLGG-PVISSTEALAPKALPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   +ISSTEAL  + +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLASDGKGG  252
            K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++  +  V+G EN    ++D    
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN----TGDEVNV  284

Query  253  QLRLEADQV-------LVAVGRRPRTKGFNLECLDLKMNGAA-IAIDERCHTSMHNVWAI  304
            ++++++ +        LV++GR+P T  + LE +++ +++ + I I+++C+T++++V AI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  305  GDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQG  364
            GD AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  365  LDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLIVGWQAVGVAVSELSTAFAQSLEM  424
             + + ++FPF AN+RA+S+    GFV+VVA ++   ++G Q VG  VS L +    ++E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  425  GACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

611) DLD in NC_015702


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (987),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 190/460 (42%), Positives = 321/460 (70%), Gaps = 3/460 (0%)

Query  8    DVVVIGSGPGGYVAAIRAAQLGFKTACIEKDSTLGGTCLNVGCIPSKALLYSSEMFHFLQ  67
            D++VIG+G+GGYVAAIRAAQLG K   ++K + LGG CLN GCIPSKAL+ +SE    + 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  68   KDGKTHGIEIS-DLRVEFSQMMKRKQEVVTGFTQGVAGLFKKNNVERITGTARLLSPNEI  126
            K+++T G+ +S +++V+ ++++K+K+ +V  +T+G+  L+K N VE I+G A L  ++  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  127  EVTKDGQTQKIQARYTILATGSEPIALPFLPFDEKIVLSSTGALSLPKIPKKLIVVGAGV  186
             +  +++ Q +  +  ILA GS P+ L  +PFD+K ++SST AL L  +P+ L+VVG+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  187  IGVELASVYSRLGTQVVVVEMLDYICPMMDqtirktllqtlkkqGLEFYLGAKVTGAEVG  246
            IG+EL++ Y+++G++V ++E  D I +  D  + KT+ + LK  G+    +A V G+E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  247  KEQVAVYVEHEGKKLTFDADNVLVAVGRRPYSKGLGLQDVGVQVSPRGFVEVNQDLQTNI  306
             ++V V V+ +GK   ++ D  LV++GR+P +  +GL+++GV +  +GF+ +N+  QTNI
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  307  PSIYAIGDLIDGAMLAHRASEEGIAAVEKLAGLHPHVNYMAIPNVIYTHPEVAAVGLTEQ  366
              +YAIGD  +G +LAH+AS E+  A E ++G ++ +++ A+P VI+++PEVA  GLTE+
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  367  EAKDAQLKLQIGSCLFKANSRARCIGDTDGLVKIIGEANTGRLIGMHIIGPNASEMIGEG  426
            EAK+       +   F+AN+RA  ++D+DG+V++++E NT R++G++++GP+ S +I+E+
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  427  VIAIEKKATISDIAYASHAHPTLSEAIKEAALNALGHAIH  466
            V+AIE  A   D++ + HAHPTL+E++ EAA   +GHA H
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

612) Pput_1450 in NC_009512


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (987),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 185/455 (41%), Positives = 305/455 (68%), Gaps = 21/455 (4%)

Query  19   YVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV  78
            YVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+     ++ +++ +G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHIKHANTMGLKV  108

Query  79   ASP-RLDIGQSVTWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGK----QVEVDGQR  133
            ++  ++D+ + V WKDGIV++LT G+ +LLK +GV V+ G A + ++     ++E + Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSTSVELPMLPLGG-PVISSTEALAPKALPQHLVVVGGGYIGLELGIAYR  192
            +   +L+LA GS +VEL  +P++   +ISSTEAL  + +P+HLVVVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLASDGKGG  252
            K+GA+V+++E+ + IL+  D+ LT  V   LK +GI++  +  V+G EN    ++D    
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN----TGDEVNV  284

Query  253  QLRLEADQV-------LVAVGRRPRTKGFNLECLDLKMNGTA-IAIDERCHTSMHNVWAI  304
            ++++++ +        LV++GR+P T  + LE +++ +++ + I I+++C+T++++V AI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  305  GDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQASQQA  364
            GD AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A +++
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  365  LDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLIVGWQAVGVAVSELSTAFAQSLEM  424
             + + ++FPF AN+RA+S+    GFV+VVA ++   ++G Q VG  VS L +    ++E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  425  GACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI  459
            GA  ED++ TIHAHPTL E++ EAA   +GHA H+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

613) lpd in NC_009485


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  264 bits (987),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 192/464 (42%), Positives = 308/464 (67%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIKVPAP-EIDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLQGKGKILGTGKV  123
            H+   MG+KV++  ++D+P +++ K+  ++    G+  L+K N ++V+ G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  QVTGNDGTAQTVETKNIVIATGSDIARLKGIEIDEKRIVSSTGALSLDKIPSSLLVVGAG  183
                 ++  Q    K++++A GS    LK++ +D+KRI+SST AL L+ +P+ L+VVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAKVTVVEFLDRILPGMDLEIAKQFQRILEKQGFAFKLGAKVTGVDT  243
             IGLELG+   ++GAKVT++E  D IL+G D  ++K  +R L   G++   +A V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGATLaatiepaaggaaeKIEADVVLVAIGRVPYTDGLGLQEAGVVLDNRGRVQIDHHFA  303
            +G  +   ++  +      I+ D  LV+IGR P T+ +GL++ GVVLD++G ++I++   
Sbjct  278  TGDEVNVHVQVDGKEEI--IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSVPGVYAIGDVVAGPMLAHKAEDEGVAVAEILAGQAGHVNYDVIPGVVYTTPEVASVGK  363
            T++  VYAIGD  +G +LAHKA  E+   AE+++GQ + ++++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEDELKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGAHIIGREAGELI  423
            TE E K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLG +++G E + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

614) lpd2 in NC_015730


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  263 bits (984),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 311/463 (68%), Gaps = 9/463 (1%)

Query  5    DVIIIGSGPGGYVCAIRCAQLGLKVACVEGRDTLGGTCLNVGCIPSKALLHASHMLHEAE  64
            D+++IG+G+GGYV AIR AQLG KV  V+ +  LGG CLN GCIPSKAL+ AS+ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFAAMGL-MGKSPSVDWKKMMSYKEDTIGQNTKGIEFLFKKNKIDWLKGWGSIPEA--G  121
            H   +MGL ++    VD   ++  K++ + + T GI  L+K N ++ + G + + EA  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDE--VHEAKNIIIASGSEPASLPGVEVDEKTVVTSTGALELAKIPKKMVVIGAGV  179
            K+K+ DE  +   K++I+A GS P  L ++  D+K +++ST AL+L  +P+ +VV+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYARLGAEVTVVEYLDAITPGMDAEVQKTFQRTLKKQGLKFIMGAAVQKTESL  239
            IGLELG+ YA++GA VT++E  D+I +G D+ + KT +R LK  G+  I +A VQ  E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  KTKAKVHYKLRKDDSEHVLDADVVLVATGRKPFTEGLGLDTLGVKMSARGQIEVNAHWET  299
                +VH  ++ D+ E++++ D  LV+ GRKP T  +GL+ +GV +  +G I +N   +T
Sbjct  279  GDEVNVH--VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  SVAGIYAIGDVIDGPMLAHKAEDEGMAAAEQVAGKHGHVNYSVIPGVIYTHPEVANVGMT  359
            ++  +YAIGD  +G +LAHKA  E+  AAE ++G+++ +++  +P VI+++PEVA  G+T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EENLKEAGHAYKVGKFSFMGNGRAKANFAGDGFVKIIADKETDRILGAHIVGPAAGDLIH  419
            E + KE G     ++F+F +N+RA +   +DGFV+++A+K+T R+LG ++VGP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EICVAMEFGASAEDLAMTCHAHPTYSEAVREAALACGSGAIHM  462
            E   A+E GA+AEDL++T HAHPT +E++ EAA +  + A HM
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

615) PB2503_08934 in NC_014414


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  263 bits (983),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 199/467 (43%), Positives = 321/467 (69%), Gaps = 12/467 (2%)

Query  6    DVVVIGGGPGGYNAAIRAAQLGLSVACIEKRPSGRFGGTCLNVGCIPSKAMLHASEAYAH  65
            D++VIG+G+GGY AAIRAAQLG  V  ++K   + +GG CLN GCIPSKA++ ASE   H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK---AELGGVCLNRGCIPSKALISASERVKH  97

Query  66   AKSHLKELGVKVSG-VELDLPAMLGQKDDAVQGLTDGIAYLFKKNKVTGLKGHGRIEGP-  123
             K H + +G+KVSG V++D+P ++  KD+ V+ LTDGI  L+K N V  + G++ +  + 
Sbjct  98   IK-HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH  156

Query  124  -GKVILTDEDGKEEPLSASTIVIATGSSVMSLPNVEIDEDVIVSSTGALELKKVPDHMVV  182
             +K+ + DE   E+ +S   +++A GS  + L ++ +D+  I+SST AL+L+ VP+H+VV
Sbjct  157  IAKIKIEDE---EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  183  VGGGYIGLEMGSVWRRLGAKVTVVEYLDRITPGMDGEVSKQFMRILKKQGMEFKLGTKVT  242
            VGGGYIGLE+G+   ++GAKVT++E  D I +G D  ++K   R LK  G+    ++ V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  243  GIEKTKQGATLSLEPAAGGEKETLEADVVLIAIGRKPHTEGLGLDTVGIKTNDRGFIPVD  302
            G E+T  G  ++++   +G  E ++ D  L++IGRKP+T  +GL+ +G+  +D+GFI ++
Sbjct  274  GGENT--GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  303  DHYQTGVDGIYAIGDVTPGPMLAHkaedeavavaeiiagkggHVNYDVIPGVVYTDPEVA  362
            +  QT ++ +YAIGD + G +LAHKA  EA   AE+I+G+ + ++++ +P V+++DPEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  363  MVGKTEEQLKDEGVAYKVGKFPFTANSRAKTNHETDGFVKVLADAETDKVLGVHMIGTGV  422
              G TE + K+ G     ++FPF AN+RA +  ++DGFV+V+A+ +T +VLGV+M+G  V
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  423  GEMIAEACLVMEFGGSSEDIARTCHPHPTRTEALRQAAMGVEGWTMQ  469
            + +IAEA + +E G+++ED++ T H+HPT  E+L +AA GV G + +
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

616) S58_04170 in NC_020453


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  263 bits (982),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 193/464 (42%), Positives = 311/464 (68%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGLKVAVVEKNATLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIKVPAP-EIDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDvlvgkgkvlgtgkl  123
            H+   MG+KV++  ++D+P +++ K+  ++    G+  L+K N ++V+ G + +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  QVTGNDGAAQTVETKNIVIATGSDIARLKGIEIDETRIVSSTGALSLEKVPSSLLVVGAG  183
            ++  +D   Q    K++++A GS    LK++ +D+ RI+SST AL L+ VP+ L+VVG+G
Sbjct  159  KIKIED-EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAKVTVVEFLDRILPGMDGEIAKQFQRILEKQGFAFKLGAKVTGVDT  243
             IGLELG+   ++GAKVT++E  D IL+G D  ++K  +R L   G++   +A V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGATLSATIEPAAGGAAEKIEADVVLVAIGRVPYTDGLGLQEAGVVLDNRGRVQIDHHFA  303
            +G  ++  ++   +G  E I+ D  LV+IGR P T+ +GL++ GVVLD++G ++I++   
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSVPGVYAIGDVVAGPMLAHKAEDEGVAVAEILAGQAGHVNYDVIPGVVYTTPEVASVGK  363
            T++  VYAIGD  +G +LAHKA  E+   AE+++GQ + ++++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEDELKQAGTAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGAHIIGREAGEMI  423
            TE E K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLG +++G E + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

617) lpdA in NC_017082


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  263 bits (982),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 187/463 (41%), Positives = 304/463 (66%), Gaps = 5/463 (1%)

Query  5    DLVVIGTGPGGYVCAVRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMFEEAG  64
            DL+VIG+G+GGYV A+RAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGVSVSAP-KLELPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGAGKV  123
            H+   MG+ VS+  ++++P +++ K+  ++    G+  L+K N ++V+ G + +  A   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  EVSADGKSQTIETKSIVIATGSDIARLKGIEIDEKRIVSSTGALSLDKVPGKLLIVGAGV  183
             +  ++  Q +  K +++A GS    LK++ +D+KRI+SST AL L+ VP  L++VG+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  IGLELGSVWKRLGAEVVVVEFLDRILPGMDGEIAKQFQRILEKQGFAFKLGAKVTAVDTS  243
            IGLELG+   ++GA V ++E  D IL+G D  ++K  +R L   G++   +A V + + +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  GKTLKATIEPAAGGAAETLEADVVLVAIGRVPYTDGLGLKEAGVALDPRGRVQIDPHFAT  303
            G  ++  ++   +G  E ++ D  LV+IGR P T+ +GL + GV LD +G ++I+    T
Sbjct  279  GDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  SVKGVYAIGDVVAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTTPEVSSVGKT  363
            ++  VYAIGD  +G +LAHKA  E+   AE+I+GQ + ++++ +P V+++ PEV+  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEELKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGEMIH  423
            E E K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLGV+++G E + +I 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EACVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM  466
            EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

618) GWCH70_2306 in NC_012793


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  263 bits (983),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 190/473 (41%), Positives = 329/473 (70%), Gaps = 14/473 (2%)

Query  3    KEY-DLVILGGGTGGYVAAIRASQLGLKTAVVEKGKLGGTCLHAGCIPSKALLRSAEVYA  61
            K Y DL+++G+G+GGYVAAIRA+QLG K  +V+K+ LGG CL+ GCIPSKAL+ ++E   
Sbjct  37   KKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVK  96

Query  62   QTKNSETFGV-MASDVRLDFAKVQARKAAIIEQLHKGVQHLMKKGKIDVYAGTGRILGPS  120
            + K+++T G+ ++++V++D + V  +K +I+++L  G++ L+K   ++V +G + +  + 
Sbjct  97   HIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH  156

Query  121  IFSPMPGTISVEMNDGSENEMLVPKNVIIATGSRPRTLPGLDIDGKLVMTSDEALQMETL  180
            I     + I +E     E++++  K++I+A GS P  L ++ +D K +++S EALQ++ +
Sbjct  157  I-----AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  181  PSSiiivgggvigiEWASMLNDFGVEVTVLEYAERILPTEDRDVSKEVEKLLKRRGITIV  240
            P+ +++VGGG IG+E ++    FG  VT+LE ++ IL+  D  ++K V + LK  GIT++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  241  AGAKVLPETLEKGNGVTIKAEYNGEQKTFTAEKMLVSVGRQANIEGIGIENTDIVVE-KG  299
            ++A ++    + G+ V +  + +G +  +  +  LVS+GR++N   IG+EN ++V++ +G
Sbjct  268  TDA-LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  300  FIQTNEFYQTKESHIYAIGDVIGGLQLAHVASHEGIVAVEHIAGQNPSPIDYTMISKCVY  359
            FI+ N+  QT+  H+YAIGD  GG  LAH AS E+ +A E I+GQN S ID+  ++  ++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQN-SVIDFQAMPFVIF  385

Query  360  SRPEVASVGLTEEEAKAKGYDVKVGKFPFKAIGKALVFGETEGFVKIVADQKTNDLLGVH  419
            S PEVA  GLTE EAK KGY+   ++FPF+A ++AL  ++++GFV++VA+++T+ +LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  420  MVGPHVTDMISEAGLARVLDATPWEVAHTIHPHPTLSEAMAEAALAVDGKAIH  472
            MVGP+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +V G A H
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

619) RPB_0274 in NC_007778


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  263 bits (984),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 189/464 (41%), Positives = 309/464 (67%), Gaps = 6/464 (1%)

Query  5    DLVIIGTGPGGYVCAIRAAQLGLKVAVVEKNPTLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL++IG+G+GGYV AIRAAQLG KV +V+K + LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIGVPAPT-LDLPTMMNFKQQGIDGNVKGVEYLMKKNKIDVLVGRGKVLGTGKV  123
            H+   MG+ V++   +D+P +++ K+  ++    G+  L+K N ++V+ G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  EVTGNDGKAQTVETKSIVIATGSDVAKLKGIEIDEKRIVSSTGALSLDKVPGKLIVVGAG  183
                 ++  Q    K +++A GS    LK++ +D+KRI+SST AL L+ VP  L+VVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAQVTVVEFLDRILPGMDAEIVKQFQRILEKQGFAFKLGAKVTGVDS  243
             IGLELG+   ++GA+VT++E  D IL+G D+ + K  +R L   G++   +A V G ++
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGKQLKVSVEAAAGGNPETLEADVVLVAIGRVPFTEGLGLQEAGVALDERGRVAIDDHFA  303
            +G +++V V+   +G+ E ++ D  LV+IGR P T  +GL++ GV LD++G + I++   
Sbjct  278  TGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSVQGVYAIGDVVKGPMLAHKAEDEGVAVAEIIAGKAGHVNYDVIPGVVYTTPEVSSVGK  363
            T+++ VYAIGD   G +LAHKA  E+   AE+I+G+ + ++++ +P V+++ PEV+  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGLVKILADAKTDRVLGVHIVGREAGEMI  423
            TE + K+ G     ++FPF AN+R+     +DG+V+++A+ +T RVLGV++VG E + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

620) lpdA1 in NC_016001


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  262 bits (981),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 190/445 (43%), Positives = 314/445 (71%), Gaps = 5/445 (1%)

Query  5    DVVVIGSGPGGYVSAIRCAQLGFKTAIIEKYSTLGGTCLNVGCIPSKALLSSSHHYSDLA  64
            D++VIG+G+GGYV+AIR AQLG K  +++K + LGG CLN GCIPSKAL+S+S++  ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HLADHGIEISGDIAFNLEKMIARKQAVVDQTSGGVKFLMDKNKITVFEGLGSFIDANTIA  124
            H    G+ +SG++  ++  ++ +K+++V++ ++G++ L+  N + V+ G  +++    IA
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  IAKADGTTETLSTKNVIIATGSKPSNLPFIKIDKERIITSTEALKLKEVPKHLvvigggv  184
              K ++  + +S K++I+A GS P +L  + +D+ RII+STEAL+L+EVP+HLVV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  igiELGQVYLRLGAQVSVVEYLDRIIPGMDAALSKELTKVLKKQGMKFYTSHKVKSVERS  244
            IG+ELG  Y ++GA+V+++E  D I++G D+ L+K + + LK  G+   T   V++ E +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GEGVVVQAE-NAKGEMITLEGDYSLVSVGRRPYTDGLNAANAGVKISDRGQIEVNDHLQT  303
            G+ V V+ + ++K E+I  + DY LVS+GR+P T+ +   N GV + D+G I +N+  QT
Sbjct  279  GDEVNVHVQVDGKEEII--QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  NIPNIYAIGDVVRGAMLAHKAEEEGVLVAEILAGQKPHIDYNLIPGVVYTWPEVAAVGKT  363
            NI ++YAIGD   G +LAHKA  E+ + AE+++GQ++ ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEQLKEAGITFKSGSFPFKALGRARASADLDGFVKILADAKTDEVLGIHIIGARAADLIA  423
            E + KE G    S+ FPF+A +RA + +D DGFV+++A+ +T  VLG++++G+  + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EAVTAMEYRASAEDISRMSHAHPTF  448
            EAV A+E  A+AED+S   HAHPT+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTL  481

621) Phep_3710 in NC_013061


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  262 bits (980),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 189/445 (43%), Positives = 311/445 (70%), Gaps = 6/445 (1%)

Query  4    DVVVIGSGPGGYVGAIRCAQLGLKTAVIEKYKTFGGTCLNVGCIPSKALLDSSEHFHNAA  63
            D++VIG+G+GGYV+AIR AQLG K  +++K   +GG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HTFQTHGINLK-DLKVDMPQMIARKNDVVAQNTAGIQYLFKKNKIDAFEGVGSFIDKNTI  122
            H+ +T G+++  +++VDMP+++ +K+++V + T GI+ L+K N ++ + G + + + +  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  KITKDGKSETITAKNVIIASGSKPTALPFLPVDKKRIITSTEALNITEVPKQMvvigggv  182
            KI  ++  + ++ K++I+A GS P  L  +P D+KRII+STEAL++ EVP+++VV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  183  igLELGSVYARLGTKVSVIEFMPSIIGTMDAGLGKELQRVLKKSLGMEFFMGHKVTGAST  242
            IGLELG+ YA++G+KV+++E   +I++  D+ L K ++R L K +G+  + +  V G+  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVITDALVQGGEN  277

Query  243  KGKKVTVTATNAKGEEVKFEADYCIVAVGRTAYTEGLGLENIGIKPEERGNKIPVNDHLE  302
             G  V V   +  G E  ++ DYC+V++GR + T  +GLENIG+  +++G  I +N+  +
Sbjct  278  TGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKINNKCQ  335

Query  303  TTVPGVYAIGDVIKGAMLAHKAEDEGVYVAERIAGQKPHINYNLIPGVVYTWPEVASVGY  362
            T +  VYAIGD   G +LAHKA  E+   AE I+GQ++ I+++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  363  TEEQLKEKGLSYKTGSFPFKASGRAKASMDTDGFVKVLADAKTDEILGVHMIGPRAADMI  422
            TE + KEKG    ++ FPF+A++RA +  D+DGFV+V+A+ +T  +LGV+M+GP  + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  423  AEAVVAMEFRASAEDIARICHAHPT  447
            AEAV A+E  A+AED++   HAHPT
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPT  480

622) lpdA1 in NC_009613


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  262 bits (979),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 188/444 (43%), Positives = 311/444 (71%), Gaps = 3/444 (0%)

Query  5    DVVIIGSGPGGYVSAIRCAQLGFKTAIIEKYSTLGGTCLNVGCIPSKALLASSHHYQELQ  64
            D+++IG+G+GGYV+AIR AQLG K  +++K + LGG CLN GCIPSKAL+++S++ ++++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HFADHGIEVSGEVKVNLEKMIARKQAVVDQTSGGVKFLMDKNKVTVYQGLGSFEDATHVK  124
            H    G+ VSGEV+V++  ++ +K+++V++ ++G++ L+  N V V  G  ++   +H+ 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VTKADGSSEVLEAKNIIIATGSKPSSLPFIKLDKERIITSTEALKLPEVPKHLviigggv  184
              K ++  +++  K++I+A GS P  L  + +D+ RII+STEAL+L EVP+HLV++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  igiELGQVYLRLGSQVSVVEYLDRIIPGMDASLSKELTKVLKKQGMKFYVSHKVKSVERN  244
            IG+ELG  Y ++G++V+++E  D I++G D+ L+K + + LK  G+       V++ E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GNAVTVLAENTKGETITLEGDYSLVSVGRRPYTDGLFADKAGVKITDRGMIEVNNHLQTN  304
            G+ V V  +    E I ++ DY LVS+GR+P T+ +  ++ GV + D+G I +NN  QTN
Sbjct  279  GDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  ISNIYAIGDVVRGAMLAHKAEEEGVMVAEIIAGQKPHIDYNLIPGVVYTWPEVAAVGKTE  364
            I ++YAIGD   G +LAHKA  E+ + AE+I+GQ++ ID++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKADGVNYKAGSFPFKALGRARAGGDTDGFVKILADAKTDEVLGVHMIGARCADLIAE  424
             + K  G +  ++ FPF+A +RA + +D+DGFV+++A+ +T  VLGV+M+G+  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVTAMEFRASAEDISRMSHAHPTF  448
            AV A+E  A+AED+S   HAHPT+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTL  481

623) RSKD131_2354 in NC_011963


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  262 bits (979),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 186/453 (42%), Positives = 307/453 (68%), Gaps = 9/453 (1%)

Query  5    DVIIIGAGPGGYVSAIRCAQLGLKTAVVEGREALGGTCLNVGCIPSKALLHATHNLHEVH  64
            D+++IGAG+GGYV+AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ A++ + ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   ENFEKMGL-MGAHPTVDWSKMQGYKQEVVDGNTKGIEFLFKKNKITWLKGWGSIPEP--G  121
            +  + MGL ++++  VD + +   K+ +V+  T GI  L+K N +  + G + + E+  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGEE--IHEAKSIVIATGSEPASLPGVEVDESVIVTSTGALSLGRIPETMVVIGAGV  179
            K+K+ +E  I   K +++A GS P  L ++  D+  I++ST AL L  +P+ +VV+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYARLGTKVTVVEYMEAILPGMDAEVVKTTQRILAKQGLSFVLGAAVKGATVA  239
            IGLELG+ YA++G+KVT++E  ++IL+G D+ + KT +R L   G++ + +A V+G+  +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  DGKATVTWAAKKDGKETSLTVDTVLVATGRKPFTEGLGLEALGVEMLPRGVVKIDDHFRT  299
            ++   V    + DGKE  +  D  LV+ GRKP T  +GLE +GV +  +G +KI++  +T
Sbjct  279  GDEVNVH--VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  SVPGIYAIGDCVPGMMLAHKAEDEGVALAEILAGKHGHVNYGVIPGVIYTTPEVASVGRT  359
            ++  +YAIGDC  G +LAHKA  E+   AE+++G+++ +++  +P VI++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EESLKEEGRAYKVGKFPFMGNARAKAVFQAEGFVKMIADKETDRILGCHIIGPAAGDLIH  419
            E   KE G     ++FPF +NARA +V +A+GFV+++A+K+T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EVCVAMEFGASAQDLAMTCHAHPTWSEAVREAA  452
            E   A+E GA+A+DL++T HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

624) RPE_0290 in NC_008435


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  262 bits (979),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 191/464 (42%), Positives = 299/464 (65%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGLKVAVVERRDTLGGTCLNIGCMPSKALLHASELFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V++ + LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIGVS-KPTLDLPAMMEFKQQGIDGNVKGVEFLMKKNKIDVLRGTGKVLGSGKV  123
            H+   MG+ VS    +D+P ++  K+  ++    G+  L+K N ++V+ G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  QVTAADGKAESVEAKSIVIATGSTVAPLKGVTIDEKRIVSSTGALSLPKVPGKLLVIGAG  183
                 ++  +    K +++A GS    LK++ +D+KRI+SST AL L  VP  L+V+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAEVTVVEFLDRILPGMDGEVVKQFQRLLEKQGFVFNLGSKVTGVDA  243
             IGLELG+   ++GA VT++E  D IL+G D  + K  +R L   G+    ++ V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGAKLKATVEPAAGGAAETIEADVVLVAIGRIPYTKHLGLEEAGIKMDSRGRIEIDDHFA  303
            +G  ++  V+   +G  E I+ D  LV+IGR P T  +GLE+ G+ +D +G I I++   
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TAVQGVYAIGDAVRGPMLAHKAEDEGVAVAEIIAGKAGHVNYDVIPGVVYTTPEVACVGK  363
            T ++ VYAIGD   G +LAHKA  E+   AE+I+G+ + ++++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKQAGVNYATGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIVGREAGELI  423
            TE E K+ G +  +++FPF AN+R+     +DGFV+++A+ +T RVLGV++VG E + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALSVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

625) lpdA in NC_008209


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  262 bits (978),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 311/463 (68%), Gaps = 9/463 (1%)

Query  5    DVIIIGSGPGGYVCAIRCAQLGLKVACVEGRDTLGGTCLNVGCIPSKALLHASHMLHEAE  64
            D+++IG+G+GGYV AIR AQLG KV  V+ +  LGG CLN GCIPSKAL+ AS+ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFAAMGL-VGKSPSVDWKKMMSYKEDTIGQNTKGIEFLFKKNKIDWLKGWGAIPEA--G  121
            H   +MGL V+    VD   ++  K++ + + T GI  L+K N ++ + G + + EA  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDE--VHEAKHIIIASGSEPASLPGVEVDEKTVVTSTGALELGKIPKKMVVIGAGV  179
            K+K+ DE  +   K++I+A GS P  L ++  D+K +++ST AL+L  +P+ +VV+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYARLGAEVTVVEFLDAITPGMDAEVQKTFQRTLKKQGLKFIMGAAVQKTESL  239
            IGLELG+ YA++GA VT++E  D+I +G D+ + KT +R LK  G+  I +A VQ  E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  KTKAKVHYKLRKDDSEHVLDADVVLVATGRKPFTEGLGLDALGVKMSARGQIEVNAHWET  299
                +VH  ++ D+ E++++ D  LV+ GRKP T  +GL+ +GV +  +G I +N   +T
Sbjct  279  GDEVNVH--VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NVPGIYAIGDVIDGPMLAHKAEDEGMAAAEQVAGKHGHVNYGVIPGVIYTHPEVANVGMT  359
            N+  +YAIGD  +G +LAHKA  E+  AAE ++G+++ +++  +P VI+++PEVA  G+T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EENLKEAGHAYKVGKFSFMGNGRAKANFAGDGFVKIIADKDTDRILGAHIIGPAAGDLIH  419
            E + KE G     ++F+F +N+RA +   +DGFV+++A+K+T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EICVAMEFGASAEDLAMTCHAHPTYSEAVREAALACGDGPIHM  462
            E   A+E GA+AEDL++T HAHPT +E++ EAA +  + + HM
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

626) PFLU3967 in NC_012660


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  262 bits (978),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 182/438 (42%), Positives = 296/438 (68%), Gaps = 11/438 (2%)

Query  19   YVAAIRAGQLGIPTLLVEGQALGGTCLNIGCIPSKALIHVAEQFQQTVQHSQGSHLGIEV  78
            YVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+ ++ ++H++   L +  
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKH-IKHANTMGLKVSG  110

Query  79   DVPTLDIRKSVEWKDGIVDRLTTGVAALLKKHKVQVIHGWAKVADGK----TVDVGDQRI  134
            +V  +D+   V WKDGIV++LT G+ +LLK + V+VI G A ++++      ++  +Q +
Sbjct  111  EVQ-VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIF  169

Query  135  QCEHLLLATGSKSVNLPMLPIGG-PIISSTEALAPTRVPKRLIVVGGGYIGLELGIAYRK  193
               +L+LA GS +V+L  +P++   IISSTEAL    VP++L+VVGGGYIGLELG AY K
Sbjct  170  SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAK  229

Query  194  LGAEVSVVEAQDRILPAYDAELTQPVNESLKHLGVKLFLNHSVSG--FADNQLQVR-DPK  250
            +GA V+++E+ D IL++ D+ LT+ V+  LK++G+ ++ +  V G   ++++++V+ +  
Sbjct  230  FGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVD  289

Query  251  GDTLSLETDQVLVAVGRTPNTQGWNLEALNLEMNGAA-VKIDSRCQTSMRNVWAIGDLSG  309
            G    ++ D  LV++GR PNT    LE + + +++ + +KI+++CQT++ +V AIGD +G
Sbjct  290  GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAG  349

Query  310  EPMLAHRAMAQGEMVAELISGKSREFNPAAIPAVCFTDPELVVVGKTPDEAKAAGLDCIV  369
              +LAH+A  ++ + AE+ISG++  ++  A+P V F+DPE+   G T  EAK  G + + 
Sbjct  350  GDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVS  409

Query  370  SSFPFAANGRAMTLESKTGFVRVVARRDNHLIVGWQAVGAGVSELSTAFGLSLEMGARLE  429
            S FPF AN+RA+++    GFV+VVA ++   ++G Q VG+ VS L +   +++E GA  E
Sbjct  410  SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAE  469

Query  430  DVAGTIHAHPTLGEAVQE  447
            D++ TIHAHPTL E++ E
Sbjct  470  DLSLTIHAHPTLPEPLME  487

627) Rsph17029_2622 in NC_009049


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (974),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 186/453 (42%), Positives = 306/453 (68%), Gaps = 9/453 (1%)

Query  5    DVIIIGAGPGGYVSAIRCAQLGLKTAVVEGREALGGTCLNVGCIPSKALLHATHNLHEVH  64
            D+++IGAG+GGYV+AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ A++ + ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   ENFEKMGL-MGAHPTVDWSKMQGYKQEVVDGNTKGIEFLFKKNKITWLKGWGSIPEP--G  121
            +  + MGL ++++  VD + +   K+ +V+  T GI  L+K N +  + G + + E+  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGEE--IHEAKSIVIATGSEPASLPGVEVDESVIVTSTGALSLGRIPETMVVIGAGV  179
            K+K+ +E  I   K +++A GS P  L ++  D+  I++ST AL L  +P+ +VV+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYARLGTKVTVVEYMEAILPGMDVEVVKTTQRILAKQGLSFVLGAAVKGATVA  239
            IGLELG+ YA++G+KVT++E  ++IL+G D  + KT +R L   G++ + +A V+G+  +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  DGKATVTWAAKKDGKETSLTVDTVLVATGRKPFTEGLGLEALGVEMLPRGVVKIDDHFRT  299
            ++   V    + DGKE  +  D  LV+ GRKP T  +GLE +GV +  +G +KI++  +T
Sbjct  279  GDEVNVH--VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  SVPGIYAIGDCVPGMMLAHKAEDEGVALAEILAGKHGHVNYGVIPGVIYTTPEVASVGRT  359
            ++  +YAIGDC  G +LAHKA  E+   AE+++G+++ +++  +P VI++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EESLKEEGRAYKVGKFPFMGNARAKAVFQAEGFVKMIADKETDRILGCHIIGPAAGDLIH  419
            E   KE G     ++FPF +NARA +V +A+GFV+++A+K+T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EVCVAMEFGASAQDLAMTCHAHPTWSEAVREAA  452
            E   A+E GA+A+DL++T HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

628) Echvi_0770 in NC_019904


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (974),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 185/452 (41%), Positives = 316/452 (70%), Gaps = 5/452 (1%)

Query  32   DLIVIGSGPGGYVAAIRGAQLGMKTAIVEKYPTLGGTCLNVGCIPSKALLDSSEHYHNAA  91
            DL+VIG+G+GGYVAAIR+AQLG K  +V+K + LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  92   HTFKTHGIDLK-DLKVNLKQMISRKDDVVKQNVDGISYLMKKNKIDVHQGVGSFVDKNTV  150
            H+ +T G+ +  +++V++ +++ +KD++V++  DGI  L+K N ++V  G + + + +  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  151  KVTKDDGKSTEITGENIIIATGSKPASLPFIEIDKKRVITSTEALKMKEVPKRMiviggg  210
            K+  +D     ++  ++I+A GS P  L  + +D+KR+I+STEAL+++EVP++++V+GGG
Sbjct  159  KIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  211  vigMELGSVYARMGAKVSVVEFMDSLIPSMDKTMGKELQKSLKKLGFEFYLKHKVTAVKS  270
             IG+ELG+ YA+ GAKV+++E  D+++++ D  + K +++ LK +G+       V +  +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  271  TAKEVTVTAENSKGEEVQVKGDYVLVSIGRKPYTEGLNPEAAGVKVNDRGQVEVDEHLKT  330
            T+ EV V  +    EE+ ++ DY LVSIGRKP T  +  E  GV ++D+G + +++  +T
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  331  SADNIYAIGDVVKGAMLAHKAEEEGVLVAEQLAGQKPHINYNLIPGVVYTWPEVAAVGYS  390
            + +++YAIGD   G +LAHKA  E+ + AE ++GQ++ I+++ +P V+++ PEVA  G +
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  391  EEQLKEKGIKYKTGKFPFMASGRARASMDTDGLVKVLADAETDEILGVHMIGPRTADMIA  450
            E + KEKG    +++FPF A++RA +  D+DG+V+V+A+ +T  +LGV+M+GP  + +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  451  EAVVAMEYRASAEDIARMSHAHPTYTEAFKEA  482
            EAV A+E  A+AED++   HAHPT  E++ EA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

629) lpdA in NC_007426


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (977),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 185/455 (41%), Positives = 299/455 (66%), Gaps = 6/455 (1%)

Query  22   YVAAIRAGQLDVDVTLVEADAYGGTCLNEGCIPSKALIHVATLADEVESAEAMGLHARAD  81
            YVAAIRA+QL+  V LV+    GG CLN GCIPSKALI  +    ++  A++MGL   ++
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGE  111

Query  82   V--DMQGLVDWKDGVVDQLTSGVEKLCKANGVSLVEGRAEFVDGETARIAHGGEGQGSET  139
            V  DM  +V WKDG+V++LT G+  L K+NGV ++ G A + +++ A+I   +E Q    
Sbjct  112  VQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQ---I  168

Query  140  VTFDSAVIATGSRPIELPGVEFDGEHILDSSDVLDLRSVPESMTVVGGGYIGMELSTMLA  199
             ++   ++A GS P+EL ++ FD  +I+ S++ L+L+ VP+ + VVGGGYIG+EL+T  A
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  200  KLGCDVTIVEMLDDILPGYTEDITRLVRNRAESLGVAFSFGERATGWEPAGDGVRLDTET  259
            K+G  VTI+E  D IL+G    +T+ V+ +   +G++   +    G E +GD V ++ + 
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV  288

Query  260  EDGETASYTAENVLVAVGREGAADTCNVEALGLEPRNDGTLETDATTQTSVDGIYAVGDV  319
             DG       +  LV++GR   ++   +E +G+   ++G +  +   QT+++ +YA+GD 
Sbjct  289  -DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDC  347

Query  320  AGEPMLAHKAYREGHVAAEVVAGEPSRLDYQAIPSAVFTDPEIGTVGLTEAEAEAEGFDP  379
            AG  +LAHKA  E+ +AAEV++G+ S +D+QA+P  +F+DPE++  GLTE EA   G++ 
Sbjct  348  AGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYET  407

Query  380  VVGEMPLRASGRALTLGADEGFVRIVADAETGFVLGGQIvgpeaaelvaevglaielGAR  439
            V +  P++A++RAL+++  +GFV++VA+ +T  VLG Q+VGPE + L+AE  +AIE GA 
Sbjct  408  VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGAN  467

Query  440  LEDIAATVHTHPTLSEavaeaaanardsaIHTLNR  474
             ED++ T+H+HPTL+E++ EAA    + A H LN+
Sbjct  468  AEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

630) RSP_0962 in NC_007493


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (976),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 186/453 (42%), Positives = 307/453 (68%), Gaps = 9/453 (1%)

Query  5    DVIIIGAGPGGYVSAIRCAQLGLKTAVVEGREALGGTCLNVGCIPSKALLHATHNLHEVH  64
            D+++IGAG+GGYV+AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ A++ + ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   ENFEKMGL-MGAHPTVDWSKMQGYKQEVVDGNTKGIEFLFKKNKITWLKGWGSIPEP--G  121
            +  + MGL ++++  VD + +   K+ +V+  T GI  L+K N +  + G + + E+  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGEE--IHEAKSIVIATGSEPASLPGVEADESVIVTSTGALSLGRIPETMVVIGAGV  179
            K+K+ +E  I   K +++A GS P  L ++  D+  I++ST AL L  +P+ +VV+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYARLGTKVTVVEYMEAILPGMDAEVVKTTQRILAKQGLSFVLGAAVKGATVS  239
            IGLELG+ YA++G+KVT++E  ++IL+G D+ + KT +R L   G++ + +A V+G+  +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  DGKATVTWAAKKDGKETSLTVDTVLVATGRKPFTEGLGLEALGVEMLPRGVVKIDDHFRT  299
            ++   V    + DGKE  +  D  LV+ GRKP T  +GLE +GV +  +G +KI++  +T
Sbjct  279  GDEVNVH--VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  SVPGIYAIGDCVPGMMLAHKAEDEGVALAEILAGKHGHVNYGVIPGVIYTTPEVASVGRT  359
            ++  +YAIGDC  G +LAHKA  E+   AE+++G+++ +++  +P VI++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EESLKEEGRAYKVGKFPFMGNARAKAVFQAEGFVKMIADKETDRILGCHIIGPAAGDLIH  419
            E   KE G     ++FPF +NARA +V +A+GFV+++A+K+T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EVCVAMEFGASAQDLAMTCHAHPTWSEAVREAA  452
            E   A+E GA+A+DL++T HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

631) JCM7686_2588 in NC_022041


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (975),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 192/455 (43%), Positives = 301/455 (67%), Gaps = 11/455 (2%)

Query  5    DLIVIGAGPGGYVCAIRAAQLGLKVACVEGRETLGGTCLNVGCIPSKALLHASHMLHETH  64
            DL+VIGAG+GGYV AIRAAQLG KV  V+ +  LGG CLN GCIPSKAL+ AS+ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   ENFAKMGLIVP-EVSVDWAKTQGYKAETVTGNTKGIEFLFKKNKIDWLKGWATIEAP--G  121
            +    MGL V+ EV VD +     K   V   T GI  L+K N ++ + G A +  +  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  QVKVGDT--TYETKNIVIATGSVPSSLKGVTVDNDAGVVVDSTGALALAKIPSSLVVIGA  179
            ++K+ D    +  K++++A GS+P  LK++  D+    ++ ST AL L  +P+ LVV+G+
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKR--IISSTEALQLQEVPNHLVVVGG  216

Query  180  GVIGLELGSVYARLGTEVTVVEYLDAITPGMDGEVQKQFQKILTKQGLKFVLGAAVSGVE  239
            G IGLELG+ YA++G+ VT++E  D+I +G D  + K  ++ L   G+  + +A V G E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  240  TEGGKAKVNYTLKKDGSEQSVEAEVVLVATGRRPFVDGLGLDRLGVALTDRGFVQIDNHW  299
              G+  +V+  ++ DG E+ ++ +  LV+ GR+P  + +GL+ +GV L D+GF++I+N  
Sbjct  277  NTGDEVNVH--VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  QTNVPGIYAIGDAVPGPMLAHKAEDEGMAAAEAIAGKHGHVNYDVIPGVIYTTPEVASVG  359
            QTN+  +YAIGD   G +LAHKA  E+  AAE I+G+++ ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  LTEEAAKATGRKIKVGKFPFMGNARAKALFQAEGFVKMIADADTDRVLGCHIIGPNAGEM  419
            LTE  AK  G     ++FPF +NARA ++ +A+GFV+++A+ +T RVLG +++GP+ + +
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  420  IHEVCVAMEFGAAAQDIALTCHAHPTCSEAVREAA  454
            I E   A+E GA A+D++LT HAHPT +E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

632) H681_13020 in NC_020829


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (976),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 189/444 (43%), Positives = 293/444 (66%), Gaps = 8/444 (1%)

Query  29   QLGVRTVLVEGAALGGTCLNIGCIPSKALIHAAEEYLKAREFTGKSPLGISVQAP-GIDI  87
            QLG + VLV+ A LGG CLN GCIPSKALI A+E   + +++   + +G+ V +   +D+
Sbjct  60   QLGKKVVLVDKAELGGVCLNRGCIPSKALISASE---RVKHIKHANTMGLKVSGEVQVDM  116

Query  88   QRTVEWKDGIVDRLTTGVAALLKKHGVTVVNGWAKVVDGKTVDVDLADGGTQHIHTEHLL  147
               V WKDGIV++LT G+ +LLK +GV V++G A + ++    + + D   Q +   +L+
Sbjct  117  PEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEE-QIFSYKDLI  175

Query  148  LAAGSKSVELPFLPLGGN-VISSTEalapkalprrlaVVGGGYIGLELGTAYRKLGVEVT  206
            LA GS +VEL  +P++ + +ISSTEAL  + +P +L VVGGGYIGLELGTAY K+G  VT
Sbjct  176  LAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVT  235

Query  207  VVEAQPRILPTYDEELTKPVTNALRKLGIELYLGHSVMGLEPDGKGLRVQ-DATGSQRVI  265
            ++E+   IL+  D  LTK V   L+ +GI +  +  V G E  G  + V+ +  G + +I
Sbjct  236  ILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEII  295

Query  266  ETDQVLVAVGRHPNATGWNLESLCLDMNGRA-VKIDEQCRTSMRNVWAIGDIAGEPMLAH  324
            + D  LV++GR PN+    LE++ + +++++ +KI+++C+T++ +V AIGD AG  +LAH
Sbjct  296  QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAH  355

Query  325  RAMAQGEMVAEIIAGKRRAFTPTAIPAVCFTDPEVVVVGLSPEQAKAAGHEVLTANFPFA  384
            +A  ++ + AE+I+G+   +   A+P V F+DPEV   GL+  +AK  G E +++ FPF 
Sbjct  356  KASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQ  415

Query  385  ANGRAMTLESSDGFVRVVARKDNHLILGWQAVGKAVSELSTAFVQSLEMGACLEDIAGTI  444
            AN+RA+++  +DGFV+VVA K+   +LG Q VG  VS L +  V ++E GA  ED++ TI
Sbjct  416  ANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTI  475

Query  445  HAHPTLGEAVQEAALRALGHALHI  468
            HAHPTL E++ EAA   +GHA H+
Sbjct  476  HAHPTLPEPLMEAAEGVMGHATHM  499

633) BJ6T_04180 in NC_017249


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (975),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 189/463 (41%), Positives = 303/463 (66%), Gaps = 5/463 (1%)

Query  5    DLVVIGTGPGGYVCAVRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMFEEAA  64
            DL+VIG+G+GGYV A+RAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFGKMGVSVSAP-KLELPAMMNFKQQGIDGNVKGVEFLMKKNKIDVlkgtgkilgtgkV  123
            H+   MG+ VS+  ++++P +++ K+  ++    G+  L+K N ++V+ G + +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  EVSADGKSQVVETKSIVIATGSDIARLKGIEIDEKRIVSSTGALSLDKVPGKLLIVGAGV  183
             +  ++  Q+   K +++A GS    LK++ +D+KRI+SST AL L+ VP  L++VG+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  IGLELGSVWKRLGAEVIVVEFLDRILPGMDGEIAKQFQRILEKQGFVFKLGAKVAGVENN  243
            IGLELG+   ++GA V ++E  D IL+G D  ++K  +R L   G+    +A V G EN 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  GKALLAKIEPAAGGAAETLDADVVLVCIGRVPYTDGLGLKEAGVALDNRGRVQIDPHFAT  303
            G  +  +++   +G  E ++ D  LV IGR P T+ +GL + GV LD++G ++I+    T
Sbjct  279  GDEV--NVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  SVKGVYAIGDVVAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTTPEVSCVGKT  363
            ++  VYAIGD  +G +LAHKA  E+   AE+I+GQ + ++++ +P V+++ PEV+  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEELKQAGQAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGEMIH  423
            E E K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLGV+++G E + +I 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM  466
            EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

634) Bind_3609 in NC_010581


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (975),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 193/464 (42%), Positives = 316/464 (69%), Gaps = 7/464 (1%)

Query  8    DLVVIGTGPGGYVCAIRAAQLGLKVAVVEKRKTFGGTCLNIGCIPSKALLYASEKFEEAA  67
            DL+VIG+G+GGYV AIRAAQLG KV +V+K   +GG CLN GCIPSKAL+ ASE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   HELASFGV-VVGKPTLDLPAMMKHKDDTVGANVNGVAYLFKKNKIDSFIGLGTITAPGKV  126
            H   + G+ V G   +D+P ++K KD+ V    +G+  L+K N ++ + G + +T +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  127  QVKAEDGSTQDIETKNIVIATGSEVTPLPGVTIDEQVVVSSTGALALPAVPQNLVVVGAG  186
            ++K ED   Q +  K++++A GS    L ++ +D++ ++SST AL L  VP++LVVVG+G
Sbjct  159  KIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  187  VIGLELGSVWSRLGAKVTVVEFLDRILPGMDGEVAKQAQRIFEKQGFTFKLGHKVLGVEQ  246
             IGLELG+  +++GAKVT++E  D IL+G D  ++K  +R +   G+T   +  V G E+
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  247  SGGSAKVTIEPAAGGEKIVLEVDKVLVSIGRRPVTDGLGLDQVGVTLD-RGRVVIDDHFA  305
            +G+  +V ++  +  E  +++ D  LVSIGR+P T+ +GL+++GV LD +G + I++   
Sbjct  278  TGDEVNVHVQVDGKEE--IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  306  TNVPGIYAIGDVVRGPMLAHKAEDEGIAVAEILAGQHGHVNYNVIPGVVYTSPEIAAVGQ  365
            TN+  +YAIGD   G +LAHKA  E+   AE+++GQ++ ++++ +P V+++ PE+A  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  366  TEEDLKAKGITYNVGKFPFTANGRARAMRQTNGFVKILADAKTDQVLGVHIIGPVAGELI  425
            TE + K KG     ++FPF AN+RA ++ +++GFV+++A+ +T +VLGV+++GP  + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  426  GEACVLMEFGGSAEDLARTCHAHPTLSEAVKEAALGVDKRSIHI  469
            +EA   +E G++AEDL+ T HAHPTL+E++ EAA GV  ++ H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

635) Marky_0707 in NC_015387


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  261 bits (974),  Expect = 9e-71, Method: Compositional matrix adjust.
 Identities = 202/467 (44%), Positives = 331/467 (71%), Gaps = 13/467 (2%)

Query  3    DVIVIGTGPGGYHAAIRAAQLGKKVLAIEADAVGGVCLNVGCIPTKALLHAAEEVENARK  62
            D++VIG+G+GGY AAIRAAQLGKKV+ ++   +GGVCLN GCIP+KAL+ A+E V + + 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  63   AAEFGLEF-GEPKVDLNKLGSWRDGIVKRLTGGVQTLFKANKVELKRGFARF-----VGP  116
            A   GL   GE +VD+  +  W+DGIV++LT+G++TL+K+N VE+  G   +     ++ 
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAK  159

Query  117  KKLEVNGEVVEGRSIIIATGSEPATLPGFEPDEQGILTSTGALKIEEGVPKRFLAIGAGA  176
             K+E + ++   + +I+A GS P  L +   D++ I++ST AL+++E VP++++ +G+G 
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGY  218

Query  177  IGLEFASIMNRFGAEVTVVEFMPQILPGSDAEVANLLARILGKQGITIKTQTKAVGYEKK  236
            IGLE+++   +FGA VT++E    IL+G+D+ +++ + R L   GIT+ T++   G E+ 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  237  KDGYHVTLEHVETGAQEEIV-VDKILVAVGRRPRTQGLGLEAAGVEVDAKGFIKVNDRME  295
             D  +V   HV+ +++EEI+  D  LV++GR+P T  +GLE  GV +D +GFIK+N++ +
Sbjct  279  GDEVNV---HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  296  TSVPGVYAIGDVARPPLLAHKAMKeglvaaenaaggnavFDYQ-IPGVVYTSPEWAAVGM  354
            T++  VYAIGD A   LLAHKA  E+ +AAE  +G N+V+D+Q +P V+++ PE A  G+
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  355  TEEEAREKGINVKVGKFPLTASGRAMTLGATEGVIKLVGDADTDLLLGVHIVAPeasdli  414
            TE EA+EKG +   ++FP+ A++RA++++ ++G +++V++ +T  +LGV++V+PE S LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  415  aeaalalemaaTVTDLALTVHAHPTLAESVMEAAEHFHKQAIHIANR  461
            AEA +A+E +A   DL+LT+HAHPTL+E++MEAAE    +A H+ N+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

636) lpdA in NC_004463


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (973),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 187/463 (41%), Positives = 304/463 (66%), Gaps = 5/463 (1%)

Query  5    DLVVIGTGPGGYVCAVRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMFEEAA  64
            DL+VIG+G+GGYV A+RAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGVSVS-EPKLELPAMMNFKQQGIDGNVKGVEFLMKKNKIDVlkgtgkilgtgkV  123
            H+   MG+ VS E ++++P +++ K+  ++    G+  L+K N ++V+ G + +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  EVSADGKSQVVETKSIVIATGSDIARLKGIEIDEKRIVSSTGALSLDKVPGKLLVVGAGV  183
             +  ++  Q+   K +++A GS    LK++ +D+KRI+SST AL L+ VP  L+VVG+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  IGLELGSVWKRLGAEVVVVEFLDRIMPGMDGEIAKQFQRILEKQGFAFKLGAKVTAVDTS  243
            IGLELG+   ++GA V ++E  D I++G D  ++K  +R L   G++   +A V + + +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  GKTLKATIEPAAGGAAETLEADVVLVCIGRVPYTDGLGLKEAGVALDNRGRVQIDPHFAT  303
            G  ++  ++   +G  E ++ D  LV IGR P T+ +GL + GV LD++G ++I+    T
Sbjct  279  GDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  SLKGVYAIGDVVAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTTPEVSSVGKT  363
            ++  VYAIGD  +G +LAHKA  E+   AE+I+GQ + ++++ +P V+++ PEV+  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEELKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGEMIH  423
            E E K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLGV+++G E + +I 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EACVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM  466
            EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

637) Desmer_3859 in NC_018515


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (972),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 184/449 (41%), Positives = 310/449 (70%), Gaps = 5/449 (1%)

Query  15   YVCALRAAQLGLSVVLIEGEQLGGTCLNRGCIPTKALVKSADLWREIGHAQEFGLHV-GD  73
            YV A+RAAQLG  VVL++  +LGG CLNRGCIP+KAL+ +++  ++I HA+  GL V G+
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGE  111

Query  74   KRVDYPAVVARKGQVVNSLVGGVEKLMKAANIRVIKGWGEFKQLGHIS-VKTENGVEDLE  132
             +VD P VV +K+ +VN L +G+  L+K+  + VI G   +   +HI+ +K E+  + + 
Sbjct  112  VQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAKIKIEDEEQIFS  170

Query  133  VENVVLATGSIPVRVPIPGADLPGVVTSDEILDLTDLPKSLviigggvigLEFASIYQAF  192
              +++LA GS+PV +     D   +++S E L+L ++P+ LV++GGG IGLE+++ Y  F
Sbjct  171  YKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKF  230

Query  193  GVKVSVVEMLPSLLPTIDEEIPKRLTPLLKRNGIDIFTKTAVKQISQQGETLLVQIEDAK  252
            G KV+++E   ++L+  D  + K +   LK  GI ++T + V+   + G+ + V+++   
Sbjct  231  GAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDG  290

Query  253  GVKEIATECVLLSTGRRPNLRGIDLQNLGLEI-EKGAIKVNSKMQTNLPNVYGIGDVVGG  311
                I  +  L+S GR+PN   I+L+N+G+ + ++G IK+N+K QTN+ +VY+IGD  GG
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  312  IMLAHVASAEGIIAVEQIAGRSGEMSYRAIPSVIFTHPEIATVGFTEQELKALGTEYRVS  371
             +LAH AS E+ IA E I+G+++ + ++A+P VIF++PE+A  G+TE+E K  G E   S
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  372  KFPFSANGKALALGESIGLVKILANHEGV-VIGASIMGPQASTLISELVIAVEKGLLAED  430
            +FPF AN++AL+++++ G+V+++A+ +   V+G  ++GP+ S+LI+E V+A+E G  AED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  431  IARTVHAHPTLPEAVMEAAHGILGKPLHL  459
            ++ T+HAHPTLPE++MEAA+G++G + H+
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

638) Nit79A3_1949 in NC_015731


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (972),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 195/481 (41%), Positives = 316/481 (66%), Gaps = 22/481 (4%)

Query  6    DVAVIGAGPGGYVAAIRCAQLGLNTICIDEWKNPKGKASLGGTCLNVGCIPSKALLESSE  65
            D+ VIGAG+GGYVAAIR AQLG + + +D       KA LGG CLN GCIPSKAL+ +SE
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-------KAELGGVCLNRGCIPSKALISASE  93

Query  66   NYHHTKHKLSAHGITTENVSVDVPVMIARKDKIVTTFTTGIASLFKKNKVKSMHGKGTLL  125
               H KH  +     + +V VD+P ++ +KD IV  +T GI +L+K N V  + G + L 
Sbjct  94   RVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-  152

Query  126  KREASATTWQIKVDDSGNTETVQAKHVIIATGSVPRSLPFAPIDNDRILDNAGALALTEA  185
               + A   +IK++D  + +    K++I+A GS+P  L   P+D+ RI+ ++ AL L E 
Sbjct  153  ---TEAHIAKIKIED--EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  186  PNRLGVIGAGVIGLEMGSVWRRLGAEVTILEAMPGFLMAADEQVAKEAKSLFAKESGLQI  245
            PN+L V+G+G IGLE+G+   ++GA VTILE+   +L ++D  ++K  K  + KE G+ +
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  246  NTGISIKSIKTsknnvvvnysdssnQEQILEVDKLIIAIGRIPNTTGLGFKDNGLLLDER  305
             T+  +++   +  + V    +   +E+I++ D  +++IGR PNT  +G+ + G++LD++
Sbjct  267  ITDALVQG-GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  306  GFIAVDQYCRTNLTNVYAVGDVVRGPMLAHKASEEGVAVAEMIMHFEKGRVSENETVDFN  365
            GFI +++ C+TN+ +VYA+GD   G +LAHKAS E+   AE+I        ++N  +DF+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVI-------SGQNSVIDFQ  378

Query  366  IIPWVIYTAPEIAWVGKNEQELKAAGITYKAGQFPFIANGRARAMGETSGFIKILADEKT  425
             +P VI++ PE+A  G  E+E K  G    +++FPF AN+RA +++++ GF++++A+ +T
Sbjct  379  AMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNT  438

Query  426  DRVLGVHMIGPHVSELISEAVMAMKFSASSEDIACIVHAHPSLSEVFHEAALGVDKRALH  485
             RVLGV+M+GP+VS LI+EAV A+  +A++ED++  +HAHP+L+E + EAA GV  +A H
Sbjct  439  KRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

Query  486  I  486
            +
Sbjct  499  M  499

639) H045_11890 in NC_020209


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (973),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 180/440 (41%), Positives = 296/440 (68%), Gaps = 15/440 (3%)

Query  19   YVAAIRAGQLGIPTLLVEGQALGGTCLNIGCIPSKALIHVAEQFQHTEHHSQGSALGIEV  78
            YVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+ +H  H   ++++G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH---ANTMGLKV  108

Query  79   AAPT-LNIQKSVEWKDAIVDRLTTGVAALLKKHKVQVIHGWARVVDGK----TVEVGDQR  133
            ++   +++   V WKD+IV++LT G+ +LLK + V+VI G A + ++      +E  +Q 
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  IQCEHLLLATGSKSVNLPMLPMGG-PIISSTEALSPTQVPKRLIVVGGGYIGLELGIAYR  192
            +   +L+LA GS +V+L  +P +   IISSTEAL   +VP++L+VVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  193  KLGADVSVVEAQDRILPAYDAELTQPVNESLKQLGVKLYLKHSVI---GFADDKLQVR-D  248
            K+GA V+++E+ D IL++ D+ LT+ V+  LK++G+ + + ++++     ++D ++V+ +
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-ITDALVQGGENTGDEVNVHVQ  287

Query  249  PNGDTLSLETDQVLVAVGRTPNTRGWNLEALNLDMNGAA-IKIDSRCQTSMRNVYAIGDL  307
             +G    ++ D  LV++GR PNT    LE + + +++ + IKI+++CQT++ +VYAIGD 
Sbjct  288  VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDC  347

Query  308  SGEPMLAHRAMAQGEMVAELISGKAREFNPAAIPAVCFTDPELVVVGKTPEQAMAAGLDC  367
            +G  +LAH+A  ++ + AE+ISG+   ++  A+P V F+DPE+   G T  +A   G + 
Sbjct  348  AGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYET  407

Query  368  IVASFPFAANGRAMTLASKSGFVRVVARRDNHLIVGWQAVGVGVSELSTAFGLSLEMGAR  427
            + + FPF AN+RA++++   GFV+VVA ++   ++G Q VG  VS L +   +++E GA 
Sbjct  408  VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGAN  467

Query  428  LEDVAGTIHAHPTLGEAVQE  447
             ED++ TIHAHPTL E++ E
Sbjct  468  AEDLSLTIHAHPTLPEPLME  487

640) dldH in NC_005296


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (972),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 190/464 (41%), Positives = 302/464 (66%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGLKVAVVEKNATLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIGVSAP-KLDLPAMMNFKQQGIDGNVKGVEYLMKKNKIDVLVGKGKILGTGKV  123
            H+   MG+ VS+  ++D+P +++ K+  ++    G+  L+K N ++V+ G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  EVTGADGKATSVEAKSIVIASGSAVAQLKGIEIDEKRVVSSTGALSLDKVPGKLIVVGAG  183
                 ++       K +++A GS   +LK++ +D+KR++SST AL L+ VP  L+VVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAEVTVVEFLDRILPGMDGEVVKQFQRILEKQGFAFKLGAKVTGVDT  243
             IGLELG+   ++GA VT++E  D IL+G D  + K  +R L   G++   +A V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGAKLAVKVEAAAGGNPETLEADVVLVAIGRVPYTEGLGLKEAGVALDERGRVVIDDHFA  303
            +G  + V V+   +G+ E ++ D  LV+IGR P T  +GL + GV LD++G + I++   
Sbjct  278  TGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSLKGVYAIGDVVRGPMLAHKAEDEGVAVAELIAGKAGHVNYDVIPGVVYTTPEVSSVGK  363
            T++  VYAIGD   G +LAHKA  E+   AE+I+G+ + ++++ +P V+++ PEV+  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGEMI  423
            TE + K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLGV+++G E + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAIKEAALTVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA  V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

641) Rpal_0180 in NC_011004


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (972),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 189/464 (41%), Positives = 302/464 (66%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGLKVAVVEKNATLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIGVPAP-KLDLPAMMNFKQQGIDGNVKGVEYLMKKNKIDVLVGKGKILGTGKV  123
            H+   MG+ V++  ++D+P +++ K+  ++    G+  L+K N ++V+ G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  EVTGADGKASSVDTKSIVIASGSAVAQLKGIEIDEKRVVSSTGALSLDKVPGKLIVVGAG  183
                 ++       K +++A GS   +LK++ +D+KR++SST AL L+ VP  L+VVG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAEVTVVEFLDRILPGMDGEVVKQFQRILEKQGFAFKLGAKVTGVDT  243
             IGLELG+   ++GA VT++E  D IL+G D  + K  +R L   G++   +A V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGAKLAVKVEAAAGGNPETLEADVVLVAIGRVPYTEGLGLKEAGVALDERGRVVIDDHFA  303
            +G  + V V+   +G+ E ++ D  LV+IGR P T  +GL + GV LD++G + I++   
Sbjct  278  TGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSLKGVYAIGDVVRGPMLAHKAEDEGVAVAELIAGKAGHVNYDVIPGVVYTTPEVSSVGK  363
            T++  VYAIGD   G +LAHKA  E+   AE+I+G+ + ++++ +P V+++ PEV+  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEDLKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGEMI  423
            TE + K+ G     ++FPF AN+R+     +DGFV+++A+ +T RVLGV+++G E + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAIKEAALTVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA  V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

642) Fjoh_2133 in NC_009441


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (971),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 189/445 (43%), Positives = 308/445 (70%), Gaps = 5/445 (1%)

Query  5    DVVIIGSGPGGYVSAIRCAQLGFKTAIVEKYNSLGGTCLNVGCIPSKALLSSSHHYAEIA  64
            D+++IG+G+GGYV+AIR AQLG K  +V+K   LGG CLN GCIPSKAL+S+S++  +I 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HFADHGIEVSGDVKINLEKMIARKQAVVDQTVGGINYLMEKNKITVFNGLGSFVDATHIA  124
            H    G+ VSG+V++++  ++ +K+++V++  +GI  L+  N + V++G  +++  +HIA
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VAKADGTSETIEAKYTVIATGSKPSSLPFIKIDKERIITSTEALALKEVPKHLviigggv  184
              K ++  + +  K  ++A GS P  L  + +D+ RII+STEAL L+EVP+HLV++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  igiELGQVYLRLGAQVSVVEFMDRIIPGMDSSLSKELTKVLKKQGMKFYVSHKVKSVERN  244
            IG+ELG  Y ++GA+V+++E  D I++G D+ L+K + + LK  G+       V++ E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDAVVVQAE-NAKGETITLEGDYSLVSVGRRPYTDGLNADKAGVKISDRGQVEVNDHLQT  303
            GD V V+ + ++K E I  + DY LVS+GR+P T+ +  ++ GV + D+G + +N+  QT
Sbjct  279  GDEVNVHVQVDGKEEII--QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  SVPNIYAIGDVVRGAMLAHKAEEEGVMVAEILAGQKPHIDYNLIPGVVYTWPEVAAVGQT  363
            ++ ++YAIGD   G +LAHKA  E+ + AE+++GQ++ ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEQLKAAGVKYKSGSFPFKALGRARASADLDGFVKILADEKTDEVLGVHMIGARTADLIA  423
            E + K  G    S+ FPF+A +RA + +D DGFV+++A+ +T  VLGV+M+G+  + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EAVTAMEFKASAEDISRMSHAHPTF  448
            EAV A+E  A+AED+S   HAHPT+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTL  481

643) Mmar10_2813 in NC_008347


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  260 bits (971),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 189/463 (41%), Positives = 310/463 (67%), Gaps = 8/463 (1%)

Query  6    DIVIIGGGPGGYNCAIRAGQLGLKTACVEMRGTLGGTCLNVGCIPSKALLHASELYEVAG  65
            D+++IG+G+GGY  AIRA+QLG K   V+ ++ LGG CLN GCIPSKAL+ ASE   V  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASE--RVKH  97

Query  66   SQFAN-LGIK-TGAIELDLDAMLGQKDEAVDGLTKGIEFLFKKNGVEYIRGRGRIAGPGK  123
             + AN +G+K +G +++D+  ++  KD  V+ LT GI  L+K NGVE I G + ++ +  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  124  VEVDAEGGKSTLETKNIVIATGSEVTPLPGVTIDEKRVVSSTGALALEQVPDKLVLIGAG  183
              +  E+    +  K++++A GS    L ++ +D+KR++SST AL L++VP+ LV++G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAQVTVVEYLDRILPGMDSELAKTAQRTFAKQGMDFKLGTKVTGVDT  243
             IGLELG+   ++GA+VT++E  D IL+G D+ L+KT +R +   G+    ++ V G + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGDRLGVTLEPAAGGEAETIEADTVLVCIGRRPFTDGLGLETVGIETDQRGFI-ANDQYR  302
            +GD + V ++   +G  E I+ D  LV IGR+P T+ +GLE +G+  D++GFI  N++ +
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  303  TSAENVWVVGDCTHGPMLAHKAEDEGVACAERIAGKAGHVNYGVIPGVVYTAPEIASVGL  362
            T+ E+V  +GDC+ G +LAHKA  E+   AE I+G+ + +++  +P V+++ PE+A  GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  363  TEDELkksgrkykkgkFPFQANSRARTNHATDGFVKILADAETDEILGAHMIGANVGEMI  422
            TE E K  G     ++FPFQAN+RA +   +DGFV+++A+ +T  +LG +M+G++V+ +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  423  GELCVAMEFRAASEDIARTCHPHPTLTEAIRQAAMGVEGWTMQ  465
            +E   A+E  A +ED++ T H+HPTL E++ +AA GV G + +
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

644) Lacal_2231 in NC_015638


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 201/450 (45%), Positives = 318/450 (71%), Gaps = 7/450 (1%)

Query  1    MSKY-DVAIIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLSSSHH  59
            + KY D+ +IG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+S+S++
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YEEATKHFEEHGIEIPGEIKVNLEKMIGRKQAVVDQTTGGVEFLMKKNNIDVFTGVGSFI  119
              +  KH +  G+ ++GE++V++  ++ +K+++V++ T+G+  L+K N ++V++G + + 
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  120  DAthikiegeetteieA-KNTIIATGSKPSNLPFITLDKERIITSTEALKLKEIPKHMiv  178
            +A   KI  E+  +I + K+ I+A GS P +L  + +D+ RII+STEAL+L+E+P+H++V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  179  igggvigLELGQVYKRLGAEVTVIEYMDRILPTMDGSLSKELNkvfkkakfkmmvSHKVQ  238
            +GGG IGLELG  Y ++GA VT++E  D IL+  D  L+K +++ +K   + ++    VQ
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  239  SVERNGNEVIVKAE-NKKGEVVEVKGDYCLVSVGRKPFTDGLNAEAAGVKLTERGQIEVN  297
            + E  G+EV V  + + K E+++   DYCLVS+GRKP T+ +  E  GV L ++G I +N
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQC--DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  298  EHLQTNVSNIYAIGDVVKGAMLAHKAEEEGTFVAETLAGQKPHIDYNLIPGVVYTWPEVA  357
            +  QTN+ ++YAIGD   G +LAHKA  E+ + AE ++GQ++ ID++ +P V+++ PEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  358  AVGKTEEELKEAGAEYKVGQFPFRALGRARASGDIDGFVKILADKNTDEVLGVHMVGARC  417
              G TE E KE G E   ++FPF+A +RA + +D DGFV+++A+KNT  VLGV+MVG+  
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  418  ADLIAEAVVAMEFRASAEDISRMSHAHPTF  447
            + LIAEAV A+E  A+AED+S   HAHPT+
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTL  481

645) bkdC in NC_017911


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 186/438 (43%), Positives = 290/438 (67%), Gaps = 11/438 (2%)

Query  19   YVAAIRAGQLGIPTILVEGQALGGTCLNIGCIPSKALIHVAEQFQQTVHHSQGSQLGIEV  78
            YVAAIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+ ++ + H++   L +  
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKH-IKHANTMGLKVSG  110

Query  79   DVPTLDIRKSVEWKDGIVDRLTTGVAALLKKHKVQVIHGWAKVIDGK----TVEVGEQRI  134
            +V  +D+   V WKDGIV++LT G+ +LLK + V+VI G A + ++      +E  EQ +
Sbjct  111  EVQ-VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIF  169

Query  135  QCEHLLLATGSTSVNLPMLPIGG-PIISSTEALAPTHVPKRLIVVGGGYIGLELGIAYRK  193
               +L+LA GS +V+L  +P++   IISSTEAL   +VP++L+VVGGGYIGLELG AY K
Sbjct  170  SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAK  229

Query  194  LGADVSVVEAQAHILPAYDAELTLPVAESLKKLGVKLYLEHSVTG--FADGKLQVRAP-N  250
            +GA V+++E+   IL++ D+ LT  V   LK +G+ +  +  V G   +++ ++V+   +
Sbjct  230  FGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVD  289

Query  251  GDILALDTDQVLVAVGRKPNTQGWNLEALNLDMNGVA-IKIDSRCQTSMRNVYAIGDLSG  309
            G    ++ D  LV++GRKPNT    LE + + +++ + IKI+++CQT++ +VYAIGD +G
Sbjct  290  GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAG  349

Query  310  EPMLAHRAMAQGEMVAELISGKAREFNPAAIPAVCFTDPELVVVGKTPDEAKAAGLDCIV  369
              +LAH+A  ++ + AE+ISG+   ++  A+P V F+DPE+   G T  EAK  G + + 
Sbjct  350  GDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVS  409

Query  370  SSFPFAANGRAMTLESKAGFVRVVARRDNHLIVGWQAVGAGVSELSTAFGLSLEMGARLE  429
            S FPF AN+RA+++    GFV+VVA ++   ++G Q VG+ VS L +   +++E GA  E
Sbjct  410  SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAE  469

Query  430  DVAGTIHAHPTLGEAVQE  447
            D++ TIHAHPTL E++ E
Sbjct  470  DLSLTIHAHPTLPEPLME  487

646) lpdA in NC_017790


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 194/469 (42%), Positives = 317/469 (68%), Gaps = 15/469 (3%)

Query  5    DVVVIGGGPAGYVAAIRAAQLGLKTACVDAFERGGKASLGGTCLNVGCIPSKAMLDSSEK  64
            D++VIG+G++GYVAAIRAAQLG K   VD      KA LGG CLN GCIPSKA++ +SE+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD------KAELGGVCLNRGCIPSKALISASER  94

Query  65   FEMISHEAQEHGIEVTGA-SVNLEKMLARKAGVVDKLTGGIAYLFKKNKVTSFFGLGKLV  123
               I H A+  G+ V+G   V++  ++ +K G+V+KLT+GI  L+K N V  + G + L 
Sbjct  95   VKHIKH-ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  124  RQEEGGWVVDAAGTEVLA-KNVIVATGSSPRALPLAPFGG-HIVENSGALAFDAVPGKLG  181
             + + + +      ++++ K++I+A GS P  L   PF+  +I+ ++ AL ++ VP  L 
Sbjct  154  -EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  182  VIGAGVIGLELGSVWRRLGAQVTVLEALPGFLMAADAAIGKEALKQFQKQGLEFHFG--V  239
            V+G+G IGLELG+   ++GA+VT+LE+   +L ++D+ + K   ++++  G+    +  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  240  NISAVTQDDAGVSVTYTEKDQEVTATFDKLIVSIGRVPHTaglgaeavglgldaRGFVQV  299
            + +  T D+  V V    K++ +   +   +VSIGR P+T+ +G E +G+ LD +GF+++
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYC--LVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  300  DSHYRTNLPGIYAIGDVIGGAMLAHKAEEEGVAVAEMLAGQAGHVNYDVIPWVIYTSPEI  359
            ++  +TN+  +YAIGD  GG +LAHKA  E+   AE+++GQ + ++++ +P VI++ PE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  360  AWAGLTEQGAKDKGLTVKTGQFPFSANGRALGHGDPRGFVKVVADADTDRLLGVHMIGPN  419
            A +GLTE+ AK+KG    +++FPF AN+RAL+ +D+ GFV+VVA+ +T R+LGV+M+GP+
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  420  VSELIGEIVALMEFGASSEDLARTVHAHPTLSEVVKEAALAADKRALHM  468
            VS LI+E V  +E GA++EDL+ T+HAHPTL+E + EAA +   +A HM
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

647) lpd2 in NC_020911


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (969),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 183/453 (41%), Positives = 300/453 (67%), Gaps = 9/453 (1%)

Query  5    DVIIIGSGPGGYVCAIRCAQLGLKTAVVEGRETLGGTCLNIGCIPSKALLHASHMRHEAE  64
            D+++IG+G+GGYV AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ AS+   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFAAMGLKGKTQ-SVDWKQMMSYKNETIAANTKGIEFLFKKNKIDWLKGWGSIPEA--G  121
            H   +MGLK   +  VD  +++  K+  +   T GI  L+K N ++ + G + + EA  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGED--VHDAKNIIIASGSEVSSLNGVEIDEKTVVSSTGALELAKIPKKMIVIGAGV  179
            K+K+ ++  +   K++I+A GS    L+++ +D+K ++SST AL+L  +P+ ++V+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYKRLGAAVTVIEYLDAITPGMDAEVQKAFKKLLTKQGLEFIMGAAVQGVEAK  239
            IGLELG+ Y ++GA VT++E  D+I +G D+ + K+ K+ L   G+  I +A VQG E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  NNKATVSYKLRKDDSEHTLDADTVLVSTGRRPFTDGLGLAALGVEMSQRGQIKTDAHYKT  299
             +   V   ++ D+ E+ ++ D  LVS GR+P T+ +GL  +GV + ++G IK +   +T
Sbjct  279  GDEVNV--HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NIDGIYALGDCIDGPMLAHKAEDEGMACAEGLAGQKPHVNYGVIPGVIYTHPEVANVGKT  359
            NI+ +YA+GDC +G +LAHKA  E+   AE ++GQ++ +++  +P VI+++PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EEQLKEDGHDYKVGKFSFMGNGRAKANFAGDGFVKILADKATDRILGAHIIGPMAGDLIH  419
            E + KE G +   ++F+F +N+RA +   +DGFV+++A+K T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EICVAMEFGAASEDLARTCHAHPTYSEAVREAA  452
            E   A+E GA +EDL+ T HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

648) Mnod_1130 in NC_011894


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (968),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 191/444 (44%), Positives = 291/444 (66%), Gaps = 6/444 (1%)

Query  4    DLVVIGTGPGGYVCAIRAAQLGLKTAVVEKRATHGGTCLNVGCIPSKALLHASEAFEETT  63
            DL+VIG+G+GGYV AIRAAQLG K  +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHLPVMGISV-GEPQLDLPQMMAFKQEGVDGNTKGVAFLLKKNGVESFQGVGRLAGAGRV  122
            KH   MG+ V GE Q+D+P+++  K+  V+  T G+  LLK NGVE + G + L+ A   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EVRLEDGGNHLLETRNIVIATGSDVANLPGVTIDEEVVVSSTGALDLTKVPEKLLVIGAG  182
             +++ED  ++++  +++++A GS   +L ++ +D+  ++SST AL+L  VP+ L+V+G+G
Sbjct  159  KIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGSEVMVVEYLDRILPGMDGEVGKQFQRILEKQGIKFRLSSKVTGVER  242
             IGLELG+   ++G+ V ++E  D IL+G D  + K  +R L   GI     + V G E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  243  TNVGAKVRVEPASGGTAETLEADVVLVAIGRVPYTNGLGLETVGVQLDNKGRILTDNLYA  302
            T  G  V V+   +G  E ++ D  LV+IGR P T  +GLE +GV LD++G I  +N   
Sbjct  278  T--GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  303  TNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGKAGHVNYGVIPNVVYTAPEVASVGM  362
            TN+  +YAIGD  +G +LAHKA  E+   AE+++G+ + +++  +P V+++ PEVA  G+
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  363  TEEELKKDGIAYKTGKFPFTANGRAKVNQTTDGFVKVLADAGTDRVLGVHIVGADAGNLI  422
            TE E K  G    +++FPF AN+RA     +DGFV+V+A+  T RVLGV++VG++ ++LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  423  MEVAVAMEFGASSEDIARTCHAHP  446
             E   A+E GA++ED++ T HAHP
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHP  479

649) Ftrac_1733 in NC_014759


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (967),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 193/457 (43%), Positives = 320/457 (71%), Gaps = 6/457 (1%)

Query  1    MSKY-DVTVIGSGPGGYVAAIRCAQLGMKTAIIEKYDTLGGTCLNVGCIPSKALLDSSEH  59
            + KY D+ VIG+G+GGYVAAIR AQLG K  +++K   LGG CLN GCIPSKAL+ +SE+
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YHNAETTFKEHGINLS-NLKVDIKQMINRKADVVKQNVDGIAYLMKKNKIDVHTGVGSFK  118
              +   + +  G+++S +++VD+ +++++K ++V++  DGI  L+K N ++V +G  ++ 
Sbjct  95   VKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYL  152

Query  119  DKNTVVVTKSDGKKEELSTEKVIIATGSKPVELPFAKFDKKRVISSTEALELKEVPKHli  178
                +   K ++  + +S   +I+A GS PVEL    FD+KR+ISSTEAL+L+EVP+HL+
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  179  ligggviglelgSVYKRIGAEVTVIEFMDSLIPTMDSTMGKEMKKSMKKLGMDLKLKHKV  238
            ++GGG IGLELG+ Y ++GA VT++E  D++++  D+ + K +K+ +K +G+ +     V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  239  TKVENKGKEVEVTFETDKGKEETIKGDYCLVAVGRKPYTEGLNLEAAGLKADEKGRISVD  298
               EN G EV+V  + D GKEE I+ DYCLV++GRKP T  + LE  G+  D++G I ++
Sbjct  273  QGGENTGDEVNVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  299  DNLKTEVDNIYAIGDVVRGAMLAHKAEEEGVFVAETMAGQKPHIHYKLIPNVVYTWPEVA  358
            ++ +T+++++YAIGD   G +LAHKA  E+ + AE ++GQ++ I+++ +P V+++ PEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  GVGYTEEELKDKGTEYKTGSFPYKALGRARASGDMEGLVKVIADKTTDEILGIHIIGARA  418
              G TE E K+KG E  ++ FP++A +RA + +D +G+V+V+A+K T  +LG++++G+  
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  419  ADMIAAGVTAMEYRASAEDVSRMSHAHPTYMEAVKEA  455
            + +IA +V A+E  A+AED+S   HAHPT  E++ EA
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

650) Sphch_3288 in NC_015594


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (967),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 188/452 (42%), Positives = 292/452 (65%), Gaps = 13/452 (2%)

Query  21   AAIRAGQLGLDTVLVEADRLGGTCLIRGCIPSKALIHVAGLYEEVLAAGSTAGRFGIRAS  80
            AAIRA+QLG   VLV+   LGG CL RGCIPSKALI  +    E +     A   G++ S
Sbjct  54   AAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISAS----ERVKHIKHANTMGLKVS  109

Query  81   AP-SLDFAETIVWKEGIVNRLSGGVAGLLRKAKVRVVKGWATFTDAKSCSVSGGDAEVLI  139
            +   +D +E + WK+GIVN+L++G+  LL+   V V+ G A +T+A    +   D E ++
Sbjct  110  GEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIF  169

Query  140  RPEHVILANGSTSVELPFLPFGGA-VIGSSEALSLPAVPKRLAVVGGGYIGLELGTAFAK  198
               ++ILA GS +VEL  +PF+   +I+S+EAL L  VP++L VVGGGYIGLELGTA+AK
Sbjct  170  SYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAK  229

Query  199  MGAEVSIVEAQDRMLPLYDTELTDPVRRWLESHGVALHLGAKALGEVNGGLEIE---SAA  255
             GA V+I+E+ D +L+  D  LT  V+R L   G+++  +A   G  N G E++      
Sbjct  230  FGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVD  289

Query  256  GERMVLPAEKIVVTVGRRPLTEGWGLESMALSMNGR-FVAVDDRCATSSTNVWAIGDLVG  314
            G   ++  +  +V++GR+P T   GLE++++ ++++ F+ ++++C T+  +V AIGD  G
Sbjct  290  GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAG  349

Query  315  EPMLAHKASAQGEMVAEIIAGKKRRFDPAGIVAVCFTEPEIVSIGLTPDAVSER-VETVT  373
              +LAHKAS ++ + AE+I+G++  +D  ++  V F++PE+   GLT     E+  ETV+
Sbjct  350  GDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVS  409

Query  374  GQFPFQANGRALSMDAGAVGGFVRVIARKVDHRILGIQAVGKHVSEFAGEFGTLLEMGAV  433
            ++FPFQAN+RALS+  +  +GFV+V+A K   R+LG+Q VG +VS + +E    +E GA 
Sbjct  410  SRFPFQANARALSVSDA--DGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGAN  467

Query  434  LEDVAGIIHAHPTLGEAIHESALKALGHAIHI  465
             ED++  IHAHPTL E++ E+A   +GHA H+
Sbjct  468  AEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

651) lpdG in NC_017506


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (966),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 193/450 (43%), Positives = 296/450 (66%), Gaps = 15/450 (3%)

Query  21   AAIRCGQLGLDTVLVEADQLGGTCLTRGCIPSKAMIHAASEFSAMMKAASKPHLGISLSE  80
            AAIR +QLG   VLV+  +LGG CL RGCIPSKA+I A+     +  A +   +G+ +S 
Sbjct  54   AAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANT---MGLKVSG  110

Query  81   PPKVDLAATVDWKDSIVKRLNTGvaallkrakvkvvkGWGTFSDAKTCNVETADGVITIQ  140
              +VD++  V WKD+IV++L  G+ +LLK   V V+ G + +++A   ++   D    + 
Sbjct  111  EVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFS  170

Query  141  SEHVILATGSAPVELPFLPLGGK-VISSTEALSLPDVPSKLVVIGAGYIGLELGIAYAKL  199
              ++ILA GS PVEL  +P++ K +ISSTEAL L +VP+ LVV+G+GYIGLELG AYAK+
Sbjct  171  YKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKF  230

Query  200  GSDVTIVESSDRILPLYDEALVEPVRRWLDESAVKLHLNARALGERDGGLAVELE---GG  256
            G+ VTI+E+SD IL+  D  L   V+R L E ++ +  +A   G  + G  V+++   +G
Sbjct  231  GAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDG  290

Query  257  SETVLPADNILVTVGRKPVTQGWGLENMALDMDGR-YVRVDEQCATSMKNVWAIGDLVGE  315
             E ++  D  LV++GRKP T   GLEN+++ +D++ +++++++C T++ +V AIGD  G 
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  316  PMLAHKASAQGEVVAEVIAGKRRRFDPVAIPAVCFTEPEIVSVG---AEPSLAG--TVTG  370
             +LAHKAS ++ + AEVI+G+   +D  A+P V F++PE+   G    E+   G  TV++
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  371  VFPVAANGRALSMDAGDNGGFVRVVAHSETHRILGVQAVGTHISELTAAFVTAVEMGATV  430
             FP  AN+RALS+  +D +GFV+VVA+ +T R+LGVQ VG ++S L A  V A+E GA  
Sbjct  411  RFPFQANARALSV--SDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANA  468

Query  431  DDIEGMIQAHPTLGEMFHEASLKILGHAIH  460
            +D+   I+AHPTL E + EA+  ++GHA H
Sbjct  469  EDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

652) lpdA in NC_005363


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  259 bits (966),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 191/464 (42%), Positives = 321/464 (70%), Gaps = 6/464 (1%)

Query  7    DLIIIGSGPGGYVGAIRAAQLGLKTAVIEKDKTYGGTCLNVGCIPSKALLESSEHYQAAQ  66
            DL++IG+G+GGYV+AIRAAQLG K  +++K    GG CLN GCIPSKAL+ +SE+ +  +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAEL-GGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HDLAAHGVKVS-KVDLDLPTMQARKDKVVKTNTEGIAFLFKKNKITPFNGMGKIVAAGKV  125
            H   + G+KVS  V++D+P +  +KD +V+  T+GI  L+K N +  ++G + +  A   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  126  EVKGADGNTQILTAKNIVIATGSVPVELPFLKYDEKRIVSNTGALALDQVPKSMivvggg  185
             +K  +++ QI++ K++++A GS+PVEL  + +D+KRI+S+T AL L++VP+ ++VVGGG
Sbjct  159  KIK-IEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  vigLELGSVWQRLGAKVTVIEYANRLGGTMDQDCMNVLKKSMEKEGMSFLLSTKVTGSKV  245
             IGLELG+   ++GAKVT++E ++ + +  D    + +K+ +   G++ +  + V G+  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  GNDGVEVTYESLTDGKASSMKADVVLVSTGRKAFSAGVGCEEMGIQKDPQGRIIVDKHYQ  305
              D V+V  +   DGK   ++ D  LVS GRK+ ++ +G E++G+  D QG I +++  Q
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  306  TNVPGIYAIGDVIAGPMLAHKAEEEGVALAEILAGGAGHVNYDTVPGVIYTHPEIASVGI  365
            TN+  +YAIGD  +G +LAHKA  E+   AE+++G  + ++++++P VI+++PE+A  G+
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  366  TEEFAKEKGLEINVGKFPFMANGRARAKGYTEGFVKIIADKKTDKILGAHMVGPSVSELI  425
            TE  AKEKG E   ++FPF AN+RA + + ++GFV+++A+K+T ++LG +MVGP VS LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  426  HEVIVCMEFGGSSEDLARSFHAHPTLSEVVREAALAVEKRQRQM  469
             E +  +E G+++EDL+ ++HAHPTL+E + EAA +V  +  +M
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

653) SAR116_1836 in NC_014010


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  258 bits (965),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 188/463 (41%), Positives = 303/463 (66%), Gaps = 4/463 (0%)

Query  7    DLIVIGAGPGGYVASIRAAQLGMNVACIDRRETLGGTCLNVGCIPSKALLNASEHYANAA  66
            DL+VIGAG+GGYVA+IRAAQLG +V  +D+ E LGG CLN GCIPSKAL++ASE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   GDTLANLGITTGAVKLDLAQMMASKDKIVGDLTSGIDFLFKKNKVTRLVGTARIDGAGAV  126
                  L ++ G V++D+++++  KD IV  LT GI  L+K N V  + G A +  A   
Sbjct  100  HANTMGLKVS-GEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  127  TITSGKDKGAYKAENILIASGSHPSSLPGIDIDEDRIVSSTGALALAKVPKKLVVIGAGY  186
             I    +   +   ++++A GS P  L ++ +D+ RI+SST AL L  VP+ LVV+G+GY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  187  IGLELGTVWARLGAEVEVIEFLPRILPGMDSEIAKKFMTIAKKQGLSFklktavksakas  246
            IGLELGT  A++GA V ++E    IL+G D+ ++K      K  G++  + T      + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQGGE  276

Query  247  ktgvsLTVEPAGGGDAETIKADIALVSVGRHPAIDGLGVDKIKLALSERGRIKVDARFET  306
            +TG  + V+   +G  E I+ D  LVS+GR P  + +G+++I + L ++G IK++ + +T
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  307  NIEGIFAIGDVIDGPMLAHKAEEDGVAAVEMMAGKAGHVDYDLVPGIVYTAPEIATLGKS  366
            NIE ++AIGD  +G +LAHKA  ++  A E+++G+ + +D++ +P ++++ PE+A  G +
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  367  EDMLKEAGIAYKVGSFPFSANSRARAQGHSEGFVKILADAETDRVLGVHIIGHEAGTVIH  426
            E   KE G     + FPF AN+RA + ++++GFV+++A+ +T RVLGV+++G E +++I 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  427  ECATAMAFGASSEDIARTCHGHPTLNEAVKEAALAVDGRAIHM  469
            E   A+  GA++ED++ T H+HPTL E++ EAA +V G+A HM
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

654) OB1867 in NC_004193


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  258 bits (964),  Expect = 6e-70, Method: Compositional matrix adjust.
 Identities = 193/469 (42%), Positives = 324/469 (70%), Gaps = 13/469 (2%)

Query  6    DLVILGGGTGGYVAAIRASQLKMKVAIVEKAELGGTCLHRGCIPSKALLRSAEVYQQTTR  65
            DL+++G+G+GGYVAAIRA+QL  KV +V+KAELGG CL+RGCIPSKAL+ ++E  ++  +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADEFGIQVAKPV-LDFSKVQQRKQKIIDQLHQGVQGLMKKGKIDVYQGFGRILGPSIFSP  124
            A+  G++V+  V +D + V ++K+ I+++L +G++ L+K   ++V  G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  MPGTISVEYSDGKENDMLLPKNVLIATGSRPNQLPGFEFDHNYILSSDDALALETLPDSi  184
              + I +E     E++++  K++++A GS P +L +  FD++ I+SS +AL L+ +P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  viigggvigiEWASMLNDFEVDVTILENQDRILSTEDAEISKEMSKLLSQKGINIITNAN  244
            V++GGG IG+E ++    F   VTILE  D ILS  D+ ++K + + L + GI +IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  245  VKADSVKKDQGVSLQVDVDGEIQTHQAEKVLMSVGRKGNIENIGLENTDIV-TDRNLIMT  303
            V+++  + ++ V+++V+VDG  +  Q +  L+S+GRK N  +IGLEN ++V  D+ +I  
Sbjct  272  VQGGE-NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  304  NEFYQTKESHIYAIGDVIGGLQLAHVASHEGIKAVEHMAGHTVEKIKANAIPSCIYSSPE  363
            N+  QT+  H+YAIGD  GG  LAH AS E+  A E ++G+    I  +A+P  I+S PE
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQN-SVIDFQAMPFVIFSDPE  389

Query  364  AASIGLTEAQAKEKDYEVKVGKFPFKAVGKALVYGESEGFVKIVSDKNTNDLLGVHMIGP  423
             A  GLTE +AKEK+YE   ++FPF+A ++AL  ++++GFV++V++KNT+ +LGV+M+GP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  424  HVTDMIAEASLAKFLDATPWEISESIHPHPTLSEVIGEAALAVEGNQIH  472
            +V+ +IAEA +A   +A + ++S +IH+HPTL+E + EAA +V G+  H
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

655) lpdG in NC_017506


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  258 bits (963),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 194/477 (41%), Positives = 330/477 (70%), Gaps = 12/477 (2%)

Query  4    KY-DVIVIGAGPGGYVAAIKAAQLGLKTACVESWTSEDGKAQVLGGTCLNVGCIPSKALL  62
            KY D++VIGAG+GGYVAAI+AAQLG K   V+       KA+ LGG CLN GCIPSKAL+
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVD-------KAE-LGGVCLNRGCIPSKALI  89

Query  63   EISHKFEESSHDFEMQGIIAKDVKMDIGKMMERKSGIVKQLTGGIAGLFKSNGVTSIHGH  122
              S++  +  H   M   ++ +V++D+  ++ +K GIV++LT+GI  L+K+NGV  I G+
Sbjct  90   SASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  123  GKLLANRKVEVTDKDGKSKTYEAENIILATGSKPIQIPPAPFDGEYIVDSEGALEFTEVP  182
            +  L++  +     ++  + +   ++ILA GS P+++ + PFD   I+ S  AL++ EVP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  183  KRLGVIGAGVIGLELGSVWARLGAEVTVLEAQDTFLPAVDQQVAKDALKQFQKQGLNIVM  242
            ++L V+G+G IGLELG+  A++GA VT+LE+ DT+L++ D  ++K   ++++  G+ ++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  243  GARMTGAEVKRKLVNVNYEDSKGKHE-AKFDKLIVAVGRRPYTDNLLSEDSGVQMDERGF  301
            +A + G+E     VNV+  +  GK+E  + D  +V++GR+P T+++  E+ GV +D++GF
Sbjct  269  DALVQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  302  IFVDDNCKTEAPGVWAIGDVVRGPMLAHKASEEGIMVAERIAGHKPQVNYDCIPNVVYTF  361
            I ++++C+T+   V AIGD   G +LAHKAS E+ + AE I+G+++ ++++ +P V+++ 
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  362  PEVAWVGKTEEQMKAEGEEYNVGTFPFaangramaansasgLVKIIADAKTDRIVGFHVV  421
            PEVA  G TE + K  G E   + FPF AN+RA++ + A G+V+++A+ +T R++G ++V
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  422  GPQASEIVAQGVIAMEFGSSAEDLALTCFAHPTLSESVHEAALAVGGGAIHIANRRK  478
            GP+ S ++A++V+A+E G++AEDL+LT  AHPTL+E++ EAA +V G A H+ N+++
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

656) Mpop_1582 in NC_010725


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  257 bits (961),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 196/465 (43%), Positives = 306/465 (66%), Gaps = 7/465 (1%)

Query  4    DLVVIGTGPGGYVCAIRAAQLGLKTAVVEKRATHGGTCLNVGCIPSKALLHASEAFEEAN  63
            DL+VIG+G+GGYV AIRAAQLG K  +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHFSELGIDV-GTPKLDLKKMQGFKQGGVDGNTKGVEFLLKKNKVDAYHGRGRIAGAGRV  122
            KH + +G+ V G  ++D+  +   K+G V+  T G+  LLK N V+   G + ++ A ++
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA-HI  157

Query  123  EVISDDGGNQMLETKNIVIATGSDVTRLPGVEIDEKTVVSSTGALELADVPKRLVVIGAG  182
              I  ++ +Q++  K++++A GS    L ++ +D+K ++SST AL+L +VP++LVV+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGAEVTVIEYLDRVLPGMDGEVGKQFQRILAKQGMVFKLSTKVTGVEV  242
             IGLELG+   ++GA VT++E  D +L+G D  + K  +R L   G+     + V G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG---  274

Query  243  AEKGGATVTVEPAQGGEAETIEADVVLVAIGRVPFTEGLGLETVGVATDNKGRIETDSHY  302
            +E+ G  V V+   +G  E I+ D  LV+IGR P T  +GLE +GV  D++G I  ++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  ATNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGQAGHVNYGVIPNVVYTFPEVASVG  362
             TN+  +YAIGD  +G +LAHKA  E+   AE+++GQ + +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEELKKDGIGYKVGKFPFTANGRAKANGTTDGFVKILADEKTDRVLGVHIVGADAGNL  422
             TE E K  G     ++FPF AN+RA + + +DGFV+++A+ +T RVLGV++VG++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IAEVAVAMEFAASAEDIARTCHAHPTLTEAVKEAALAVDKRAIHV  467
            IAE   A+E +A+AED++ T HAHPTL E++ EAA +V  +A H+
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

657) lpdA in NC_019567


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  257 bits (959),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 192/464 (42%), Positives = 320/464 (69%), Gaps = 6/464 (1%)

Query  7    DLIVIGSGPGGYVGAIRAAQLGLKTAVIEKDKTYGGTCLNVGCIPSKALLESSEHYQAAQ  66
            DL+VIG+G+GGYV+AIRAAQLG K  +++K    GG CLN GCIPSKAL+ +SE+ +  +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAEL-GGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HDLASHGVKVS-KVDLDLPTMQARKDKVVKQNTEGIAFLFKKNKITPFTGMGKIVGPGKV  125
            H   + G+KVS  V++D+P +  +KD +V++ T+GI  L+K N +  ++G + +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  126  EVKGADGNTQILTTKSICIATGSVPVELPFLKYDEKRIVSNTGALALDQVPKSMivvggg  185
             +K  +++ QI++ K + +A GS+PVEL  + +D+KRI+S+T AL L++VP+ ++VVGGG
Sbjct  159  KIK-IEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  vigLELGSVWQRLGAKVTVIEYANRLGGTMDQDCMNVLKKSMEKEGMSFLLSTKVTGSKV  245
             IGLELG+   ++GAKVT++E ++ + +  D    + +K+ +   G++ +  + V G+  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  GGDGVEVTYESLTDGKASSMKADVVLVSTGRKAFSTGVGCEEMGIQKDPQGRIIVDKHYQ  305
             GD V+V  +   DGK   ++ D  LVS GRK+ +  +G E++G+  D QG I +++  Q
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  306  TNVPGIYAIGDVIAGPMLAHKAEEEGVALAEMLAGGAGHVNYDTVPGVIYTHPEIASVGI  365
            TN+  +YAIGD  +G +LAHKA  E+   AE+++G  + ++++++P VI+++PE+A  G+
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  366  TEEFAKEKGIEINVGKFPFMANGRARAKGYTEGFVKIIADKKTDKILGAHMVGPSVSELI  425
            TE  AKEKG E   ++FPF AN+RA + + ++GFV+++A+K+T ++LG +MVGP VS LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  426  HEVIVCMEFGGSSEDLARSFHAHPTLSEVVREAALAVEKRQRQM  469
             E +  +E G+++EDL+ ++HAHPTL+E + EAA +V  +  +M
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

658) bglu_1g19920 in NC_012724


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  257 bits (960),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 314/462 (68%), Gaps = 14/462 (3%)

Query  6    DVVVIGAGPGGYVAAIRAAQLGKTVAVVEKWKNPAGALKLGGTCLNVGCIPSKALLASSE  65
            D++VIGAG+GGYVAAIRAAQLGK V +V+K         LGG CLN GCIPSKAL+++SE
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALISASE  93

Query  66   EFENASHHLADHGISV-GDVKMDTAKMLSRKDGIVEKMTGGIEFLFKKNKITWLKGHGKF  124
               +  H     G+ V G+V++D + ++ +KDGIV+K+T+GI  L+K N +  + G++ +
Sbjct  94   RVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  TGKTDAGVQIevsgegetevvtARNVIIATGSKARHLPNVPVDNRIVADNEGALNFDTVP  184
            T    A ++IE   +  +     +++I+A GS + +L ++P D++ +  +  AL+++ VP
Sbjct  153  TEAHIAKIKIEDEEQIFSY----KDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  NKLAVIGAGVIGLELGSVWRRLGADVTVLEAMPaflaaadeavakeaaklFKKQGLDINL  244
            N L V+G+G IGLELG+   ++GA VT+LE+  ++L+++D  ++K   + +K  G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  245  GVTIGEVKASDAGVSIAYTDKDGNAKTLEADRLIVSVGRVPNTDNLGLESIGLKANERGF  304
            +  +     ++  V++   + DG+   ++ D  +VS+GR PNT+++GLE+IG+  +++GF
Sbjct  269  DALVQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  305  IDVDDHCRTALPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIDGQKPHIDYNCIPWVIYTS  364
            I +++ C+T + +VYAIGD   G +LAHKA  E+ + AEVI GQ++ ID++ +P VI++ 
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  365  PEIAWVGKTEQALKAEGREIKTGKFPFSINGRALGMNAPDGFVKMIADAKTDEVLGVHII  424
            PE+A  G TE+  K  G E  +++FPF  N+RAL+++ +DGFV+++A+ +T  VLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  425  SANASDLIAEAVVAMEFKAASEDIARICHPHPSLSEVVREAA  466
            +++ S LIAEAV A+E  A +ED++   H+HP+L+E + EAA
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

659) RPC_0183 in NC_007925


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  257 bits (960),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 188/464 (41%), Positives = 299/464 (65%), Gaps = 6/464 (1%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGLKVAVVEKRDTFGGTCLNIGCMPSKALLYASEMFEEAG  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K + +GG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGVVVP-KPSLDLPAMMTFKQQGIDGNVKGVEFLLKKNKIDALRGSGRVLGTGKV  123
            H+   MG+ V+    +D+P ++  K+  ++    G+  LLK N ++ + G +  L  + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  EVTSADGKTQTVDAKSIVIASGSTYTPLKGVTVDEKRIVSSTGALSLDKVPGKLLVIGAG  183
                 ++  Q    K +++A GS    LK++  D+KRI+SST AL L+ VP  L+V+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAEVTVVEFLDRILPGMDGEVVKQFQRILEKQGFNFKLGSKVTAVDS  243
             IGLELG+   ++GA VT++E  D IL+G D  + K  +R L   G+    ++ V + ++
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGATLKATIEPAAGGKPETLEADVVLVAIGRIPYTKGLGLAEAGITLDERGRIAIDAHFA  303
            +G  ++  ++   +GK E ++ D  LV+IGR P T  +GL + G+ LD++G I I+    
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSLKGVYAIGDVVAGPMLAHKAEDEGVAVAEIIAGKAGHVNYDVIPGVVYTTPEVSSVGK  363
            T++  VYAIGD  +G +LAHKA  E+   AE+I+G+ + ++++ +P V+++ PEV+  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKQAGVAYTAGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIVGREAGELI  423
            TE E K+ G    +++FPF AN+R+     +DGFV+++A+ +T RVLGV++VG E + LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM  467
             EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

660) lpdA-1 in NC_011146


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  257 bits (959),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 192/466 (42%), Positives = 318/466 (69%), Gaps = 11/466 (2%)

Query  7    DLVVIGAGPGGYVAAIRAAQLGMTVAVVEKRGTLGGVCLNEGCIPSKALLDSSELFHLAG  66
            DL+VIGAG+GGYVAAIRAAQLG  V +V+K + LGGVCLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HRFSAHGIEVAPPT-LNLGQMMARKDDVVKKLTDGVTYLFKKNKIRSVNGTARLAGSEAG  125
            H  ++ G+ V+    +++ +++ +KD++V+KLTDG+  L+K N +  ++G A L+ ++  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH--  156

Query  126  GVHKVEVQGAQGGEQILA-KKVLLATGSDAVELPSLPFDGEAVVSAREALSFGKVPEHLL  184
             + K+ +++    EQI++ K ++LA GS +VEL S+PFD   ++S+ EAL +  VP+HL+
Sbjct  157  -IAKIKIEDE---EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VVGGGYIGLELGSVWLRLGAQVTVVEMLPRLIAGSDGQVAEALLRSLKKQGMRFLLGGKV  244
            VVGGGYIGLELG+   ++GA+VT++E    +++G+D  ++ ++ R LK  G+  + ++ V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  AGVEKREGALLARVEVEGAVQEISCDKVLVAVGRRPlteglgleelgvalgkgR-VQVNE  303
             G E+  + +  +V+V+G  + I CD  LV++GR+P T  +GLE++GV L+    +++N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  304  EYQTSVPGIYAIGDLIAGPMLAHKAMEEGAVCVERMRGEPSQVDYGCVPGVCYTWPEAAS  363
              QT++  +YAIGD  +G +LAHKA  E+ +  E + G+ S +D+  +P V ++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  364  VGKTEDALKEEGIPYKSGKYNFMGNGRAKCMDETEGFVKVLSDAEGTRLLGVHIFGPRAS  423
             G TE   KE G    S+++ F +N+RA  + +++GFV+V+++ +  R+LGV++ GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  424  DMIVEAVTVMSFGGSSEDIALIMHAHPTLSEAMKEAALDVDKRAIH  469
             +I EAV  +  G+++ED++L +HAHPTL+E++ EAA +V  +A H
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

661) lpdA1 in NC_019670


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  257 bits (962),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 181/439 (42%), Positives = 291/439 (67%), Gaps = 11/439 (2%)

Query  18   YVTAIRAGQLGIPTILVEGQSLGGTCLNIGCIPSKALIHVAEQFHQTQQHHQLSALGISV  77
            YV+AIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+  + ++ +   ++G+ V
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHAN---TMGLKV  108

Query  78   SAPT-LDITKSVEWKDGIVDRLTTGVAALLKKNKVQVIQGWAKVVDGKTVEV---GDTRI  133
            S+   +D+   V WKDGIV++LT G+ +LLK N V+VI G A + ++    +   ++ +I
Sbjct  109  SGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQI  168

Query  134  L-CEHLVLATGSKSVNLPMLPIGG-PIISSTEALAPTSVPKRLIVVGGGYIGLELGIAYR  191
            +   +L+LA GS +V+L  +P++   IISSTEAL    VP++L+VVGGGYIGLELG AY 
Sbjct  169  FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYA  228

Query  192  KLGVEVSVVEAQERILPAYDAELTQPVHDELRKLGVKLYLKHSVQGFDSKENTLQV-LAP  250
            K+G  V+++E+ + IL++ D+ LT+ V  +L+ +G+ +     VQG ++  + ++V +  
Sbjct  229  KFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV  288

Query  251  NGATLNLETDQVLVAVGRKPNTQGWNLEALNLDMNGSS-IKIDNRCQTSMRNVYAIGDLS  309
            +G    ++ D  LV++GRKPNT    LE + + +++ + IKI+N+CQT++ +VYAIGD +
Sbjct  289  DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCA  348

Query  310  GEPMLAHRAMAQGEMVAELISGKSREFNPTAIAAVCFTDPELVVVGKTPDEARTAGLDCI  369
            G  +LAH+A  ++ + AE+ISG++  ++  A++ V F+DPE+   G T  EA+  G + +
Sbjct  349  GGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETV  408

Query  370  VSSFPFAANGRAMTLESKSGFVRVVARRDNHVIVGWLAVGVGVSELSTAFAQSLEMGARL  429
             S FPF AN+RA+++    GFV+VVA ++   ++G   VG  VS L +    ++E GA  
Sbjct  409  SSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANA  468

Query  430  EDIGGTIHAHPTLGEAVQE  448
            ED++ TIHAHPTL E++ E
Sbjct  469  EDLSLTIHAHPTLPEPLME  487

662) Solca_3096 in NC_017770


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  257 bits (962),  Expect = 9e-70, Method: Compositional matrix adjust.
 Identities = 203/468 (44%), Positives = 325/468 (70%), Gaps = 7/468 (1%)

Query  59   LSSAHNNKSIINMKY-DVVVIGSGPGGYVAAIRCAQLGLKTAMVERYSTFGGTCLNVGCI  117
            LS  ++  +    KY D++VIG+G+GGYVAAIR AQLG K  +V++ + +GG CLN GCI
Sbjct  25   LSKEESRMTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCI  83

Query  118  PSKALLDSSEHYHNAEHTFKTHGIELS-NLKVNLEQMIKRKSEVVKQTTDGITFLMKKNK  176
            PSKAL+ +SE+  +  H+ +T G+ +S +++V++ +++K+K  +V++ TDGI  L+K N 
Sbjct  84   PSKALISASERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNG  142

Query  177  IDTYYGHGSFVNKNTIKIAKGDGSEQTIETEKVIIATGSKPATLPFISIDKKRIITSTEA  236
            ++   G++ + + +  KI K ++ EQ +    +I+A GS P  L  +++D+KRII+STEA
Sbjct  143  VEVISGEAYLTEAHIAKI-KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEA  201

Query  237  LNLQEVPKHlvligggviglelgSVYARLGAKVTVVEYMDSIIPTMDKELGKQLQRSLKG  296
            L+LQEVP+HLV++GGG IGLELG+ YA++GAKVT++E  D+I++  D  L K ++R LK 
Sbjct  202  LQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKE  261

Query  297  IGFEFLLSHKVTGATVKGKEVTVAAENSKGEPIEIKGDYCLVAVGRSAYTEGLGLENIGL  356
            IG+  +    V G+   G EV V  +    E I I+ DYCLV++GR + T  +GLENIG+
Sbjct  262  IGITVITDALVQGGENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGV  320

Query  357  TVEERGKKITVDDHLETAVKGVYAIGDVVRGAMLAHKAEEEGVFVAELIAGQKPHMNYNL  416
             ++++G  I +++  +T +  VYAIGD   G +LAHKA  E+ + AE+I+GQ++ ++++ 
Sbjct  321  VLDDQGF-IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQA  379

Query  417  IPGVVYTWPEVASVGKTEEELKASGVKYKTGSFPFKASGRARASMDTDGLIKVLADAQTD  476
            +P V+++ PEVA  G TE E K  G    ++ FPF+A++RA +  D+DG+++V+A+ +T 
Sbjct  380  MPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTK  439

Query  477  EILGVHMIGPRVADMIAEAVVAMEFRASAEDIGRICHAHPTYTESFKE  524
             +LGV+M+GP V+ +IAEAV A+E  A+AED++   HAHPT  E++ E
Sbjct  440  RVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLME  487

663) Pden_0551 in NC_008686


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  256 bits (957),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 191/455 (42%), Positives = 304/455 (67%), Gaps = 11/455 (2%)

Query  5    DLIVIGAGPGGYVCAIRAAQLGLKVACVEGRETLGGTCLNVGCIPSKALLHASHMLHETH  64
            DL+VIGAG+GGYV AIRAAQLG KV  V+ +  LGG CLN GCIPSKAL+ AS+ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   ENFEKMGL-MGAKPKVDWGKMQGYKAETVGGNTKGIEFLFKKNKIDWLKGWASIEAP--G  121
            +  + MGL +++  +VD   +   K   V   T GI  L+K N ++ + G A +  +  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDTTH--ETKNIVIATGSEPASLKGVEVDNDAGIVVDSTGALSLPKIPKSMVVIGA  179
            K+K+ D  +    K++++A GS P  LK++  D+    ++ ST AL L  +P+ +VV+G+
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKR--IISSTEALQLQEVPNHLVVVGG  216

Query  180  GVIGLELGSAYARLGAEVTVVEFLDAITPGMDGEVQKQFQRILAKQGLKFVLGAAVSGVE  239
            G IGLELG+AYA++GA VT++E  D+I +G D  + K  +R L   G+  + +A V G E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  240  VEKGKAEVKYKLRKDDSEHEIKAECVLVATGRRPYVAGLGLDKVGVALTDRGFVQIDDHW  299
              +   EV+  ++ D+ E+ I+ +  LV+ GR+P  + +GL+++GV L D+GF++I++  
Sbjct  277  --NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  QTSVKGIYAIGDAVPGPMLAHKAEDEGMAVAEVIAGKHGHVNYDVIPGVIYTTPEVASVG  359
            QT++  +YAIGD   G +LAHKA  E+   AEVI+G+++ ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  LTEEAAKESGRKIKVGKFPFMGNARAKALFQAEGFVKMIADAETDRVLGCHIIGPNAGEM  419
            LTE  AKE G     ++FPF +NARA ++ +A+GFV+++A+ +T RVLG +++GP+ + +
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  420  IHEVCVAMEFGASAQDIALTCHAHPTCSEAVREAA  454
            I E   A+E GA+A+D++LT HAHPT +E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

664) lpdA in NC_017384


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  256 bits (958),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 186/459 (41%), Positives = 305/459 (67%), Gaps = 21/459 (4%)

Query  5    DLIVIGAGPGGYVCAIRAAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHATHSLHEAQ  64
            DL+VIGAG+GGYV AIRAAQLG K  +V+ +  LGG CLN GCIPSKAL+ A++ + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFDKMGLEGA-------APTVNWDKMQAYKGDVVGQNTGGIEFLFKKNKVTWIKGWASI  117
            H  + MGL  +       +  V+W      K+++V + T+GI  L+K N V  I G A +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKW------KDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  118  PAA--GQVKVGDE--VHTAKHIVIASGSEPASLPGVEIDEEVIVSSTGALALKQIPKRLA  173
              A  +++K+ DE  + + K++++A GS P  L ++ +D+  I+SST AL L+++P++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  174  VIGAGVIGLELGSVYARLGAEVTVIEYQDKITPGMDADVQRTLQRILAKQGLNFVLGAAV  233
            V+G+G IGLELG+ YA++GA VT++E  D I +G D+ + +T++R L   G+  + +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  234  QGATTAEGGATLNYKLNKTGDEHSLTVDTVLVATGRKPFTAGLGLDTLGVALSPRGQIET  293
            QG+  + +   ++ +++  G E+ +  D  LV+ GRKP T+ +GL+ +GV L  +G I  
Sbjct  273  QGGENTGDEVNVHVQVD--GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  294  DSHYATNISGIYAIGDAIAGPMLAHKAEDEGIAIAEILAGQAGHVNYGIIPGVIYTTPEV  353
            ++   TNI  +YAIGD  +G +LAHKA  E+   AE+++GQ + +++  +P VI++ PEV
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  354  ASVGATEEALKAEGRAYKVGKFSFMGNARAKAVFQGEGFVKLIADKETDRILGVHLIGPA  413
            A  G TE   K  G     ++F+F +NARA +V +++GFV+++A+K+T R+LGV+++GP 
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  414  AGDMVHEICVAMEFGASSEDVARTCHAHPTFSEAVREAA  452
             + ++ E   A+E GA++ED++ T HAHPT++E++ EAA
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

665) EIO_0111 in NC_014625


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  256 bits (958),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 186/459 (41%), Positives = 305/459 (67%), Gaps = 21/459 (4%)

Query  5    DLIVIGAGPGGYVCAIRAAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHATHSLHEAQ  64
            DL+VIGAG+GGYV AIRAAQLG K  +V+ +  LGG CLN GCIPSKAL+ A++ + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFDKMGLEGA-------APTVNWDKMQAYKGDVVGQNTGGIEFLFKKNKVTWIKGWASI  117
            H  + MGL  +       +  V+W      K+++V + T+GI  L+K N V  I G A +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKW------KDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  118  PAA--GQVKVGDE--VHTAKHIVIASGSEPASLPGVEIDEEVIVSSTGALALKQIPKRLA  173
              A  +++K+ DE  + + K++++A GS P  L ++ +D+  I+SST AL L+++P++L 
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  174  VIGAGVIGLELGSVYARLGAEVTVIEYQDKITPGMDADVQRTLQRILAKQGLNFVLGAAV  233
            V+G+G IGLELG+ YA++GA VT++E  D I +G D+ + +T++R L   G+  + +A V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  234  QGATTAEGGATLNYKLNKTGDEHSLTVDTVLVATGRKPFTAGLGLDTLGVALSPRGQIET  293
            QG+  + +   ++ +++  G E+ +  D  LV+ GRKP T+ +GL+ +GV L  +G I  
Sbjct  273  QGGENTGDEVNVHVQVD--GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  294  DSHYATNISGIYAIGDAIAGPMLAHKAEDEGIAIAEILAGQAGHVNYGIIPGVIYTTPEV  353
            ++   TNI  +YAIGD  +G +LAHKA  E+   AE+++GQ + +++  +P VI++ PEV
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  354  ASVGATEEALKAEGRAYKVGKFSFMGNARAKAVFQGEGFVKLIADKETDRILGVHLIGPA  413
            A  G TE   K  G     ++F+F +NARA +V +++GFV+++A+K+T R+LGV+++GP 
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  414  AGDMVHEICVAMEFGASSEDVARTCHAHPTFSEAVREAA  452
             + ++ E   A+E GA++ED++ T HAHPT++E++ EAA
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

666) lpd in NC_008571


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  256 bits (956),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 192/444 (44%), Positives = 309/444 (70%), Gaps = 5/444 (1%)

Query  5    DVAVIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYDDAI  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFEDHGIEIPGEVKLNLEKMMERKSSVVSQTCDGVKFLMDKNKIDVIEGVGSFKDKTHI  124
            KH +  G+ ++GEV++++  ++ +K ++V++  DG++ L+  N ++VI G  ++   +HI
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  125  -NIEKDGETQTIEAKKTIIATGSKPANLPFIELDKERVITSTEALTLKEVPKHMiviggg  183
             +I  ++E Q +  K  I+A GS P +L  + +D+ R+I+STEAL L+EVP+H++V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  vigLELGQVYRRLGAEVTVVEFMDRIIPTMDSALSKELQKVLKKQGVKFHTSTKVKSVER  243
             IGLELG  Y ++GA VT++E  D I++  D+ L+K +++ LK  G+   T + V++ E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  NGdeitikaddkkdkeielkgdYCLVSVGRRPFTDGLNAEAAGVKLDDKGRVKVNDHLQT  303
             GDE+ +  +     EI   + YCLVS+GR+P T+ +  E  GV LDD+G +K+N+  QT
Sbjct  278  TGDEVNVHVQVDGKEEIIQCD-YCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  NVENIYAIGDVVRGAMLAHKAEEEGSMVAELMAGQKPHIDYNLIPGVVYTWPEVASVGKT  363
            N+E++YAIGD   G +LAHKA  E+ + AE+++GQ++ ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEQLKEEGVKYKEGKFPMRALGRSRASGDIDGLVKILADEKTDEVLGVHMIGARTADLIA  423
            E + KE G     ++FP +A +R+ + +D DG+V+++A+ +T  VLGV+M+G+  + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EAVTAMEFRASAEDIARMSHAHPT  447
            EAV A+E  A+AED++   HAHPT
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPT  480

667) Nmul_A0855 in NC_007614


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  256 bits (955),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 197/479 (42%), Positives = 329/479 (69%), Gaps = 21/479 (4%)

Query  6    DVAVIGAGPGGYVAAIRCAQLGLKTVCIDEWKNPQDKPSLGGTCLNVGCIPSKALLESSE  65
            D+ VIGAG+GGYVAAIR AQLG K V +D       K+ LGG CLN GCIPSKAL+ +SE
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-------KAELGGVCLNRGCIPSKALISASE  93

Query  66   NYERAARKFSAHGIKVEG-LSIDIPAMIGRKDKIVANFTGGVAMLLKKNKVASMHGRATL  124
               +  +  ++ G+KV G + +D+P ++ +KD IV ++T+G+  LLK N V  + G A L
Sbjct  94   R-VKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  LKRDRDNEADRELWQIEIRNGDKVETVGAEHVIIATGSVPRQLDAAPVDNERILDNAGAL  184
                    ++ ++ +I I + +++   +  ++I+A GS+P +L + P D+ RI+ ++ AL
Sbjct  153  --------TEAHIAKIKIEDEEQI--FSYKDLILAIGSLPVELKSMPFDQKRIISSTEAL  202

Query  185  ALTETPKRlgvigggviglEMGSVWRRLGAEVTILEALPGFLMSADEQVAKEARKIFSRE  244
             L E P++L V+GGG IGLE+G+   ++GA VTILE+   +L ++D  ++K  ++ + +E
Sbjct  203  QLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KE  261

Query  245  LGLVINTGVKISGITSGQDNVTVEYSDVDGNPQKLEVDKLIVAVGRVPNTTGLGAENVGL  304
            +G+ + T+  + G  +  D+V V+  +VDG+ + ++ D  +V++GR PNT  +G EN+G+
Sbjct  262  IGITVITDALVQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGV  320

Query  305  KLDERERIEVDVHCRTNLPNIYAVGDVVRGPMLAHKASEEGVAVAEMIAGQAGHLNLDAI  364
             LD++  I ++  C+TN+ ++YA+GD   G +LAHKAS E+   AE+I+GQ + ++++A+
Sbjct  321  VLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAM  380

Query  365  PWVIYTSPEIAWVGKTEQELKAAGVEYKAGQFPFMANGRARALGETGGFVKVLADADTDR  424
            P VI++ PE+A  G TE+E K  G E  +++FPF AN+RA ++++++GFV+V+A+ +T R
Sbjct  381  PFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKR  440

Query  425  ILGIHMIGPYVSELIAEAVVAMEFAASSEDIARIVHAHPSLSEVVHEAALAVDKRAIHI  483
            +LG++M+GP VS LIAEAV A+E +A++ED++  +HAHP+L+E + EAA +V  +A H+
Sbjct  441  VLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

668) H375_1490 in NC_020993


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

669) MA1_02235 in NC_017056


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

670) M9W_02235 in NC_017049


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

671) MA3_02260 in NC_017051


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

672) MA5_03595 in NC_017048


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

673) M9Y_02240 in NC_017050


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

674) H374_6100 in NC_020992


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

675) MA7_02230 in NC_017057


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 183/455 (41%), Positives = 317/455 (70%), Gaps = 16/455 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKYEEAI  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K + LGG CLN GCIPSKAL+++S +  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   RHFDSIG--IIADIKLDLQKMLSNKDKIVLDLTKGIESLFIKNKITKIKGEAKIISNNIV  122
            +H +++G  + +++++D+  ++  KD IV  LT GI +L+  N +  I GEA +   +I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNITIDEEFIVSSTGALKLSKVPKHLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP+HL+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVVEYASSIV----PMLDKEIAKQFMTIQQKQGIEFKLNTKVIA  234
            IGLELG+   ++GAKVT++E + +I+    P+L K + +++  I    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  SEVKSGKVNLTIEEWDKRSIITSDVVLIAVGRKAYTKNLGFESVGITTDNKGRIEINERF  294
            +E  ++ VN+ ++  +K  II  D  L+++GRK+ T ++G+E++G+  D++G I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeaiaaveiMVGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E++ GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ATEEQLQEQGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTL  414
             TE + +E+G +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAELIAYMEFGASSEDIARTCHAHPTLSEAIKEAA  449
            IAE +  +E GA++ED++ T HAHPTL+E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

676) HIMB5_00000210 in NC_018643


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (953),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 185/459 (41%), Positives = 309/459 (68%), Gaps = 4/459 (0%)

Query  8    VVIGGGPGGYVCAIRLAQLGLKTACIESRGSLGGTCLNVGCIPSKSLLNLSEEFHKVKSL  67
            +VIG+G+GGYV AIR AQLG K   +  ++ LGG CLN GCIPSK+L++ SE    +K  
Sbjct  43   LVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHA  101

Query  68   SNKGIEV-GEVKLNLEKMMKSKDKAVTVLTKGVEFLLKKNKVSYFRGHGSFKSQNEILIK  126
            +  G+ V GEV++++  ++K KD  V  LT G+  LLK N V  + G+ ++ ++ +I   
Sbjct  102  NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE-AYLTEAHIAKI  160

Query  127  DEKGNETLIEAEKTVIATGSVPVSLPGIEFDEGIIVSSTGALKLNKVPKKMvvvgggYIG  186
               ++E ++     ++A GS+PV L ++ FD+  I+SST AL+L+ VP+ +VVVGGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  187  LEMGSVWSRLGSEVHVVEFLDHITPGMDNEISKEFMKILKKQGITFHMQHKVEKINKNNS  246
            LE+G+  +++G+ V ++E  D I +G D  ++K   + LK  GIT   +  V+    N +
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG-GENTG  279

Query  247  GAVVSTTDKDGNKKDFDCDVVLISVGRKANTNGLNLDVTGVELDERNRVKTDKNFRTNMN  306
            + V    + DG+   ++CD  L+S+GRK+NT  + L+  GV LD++  +K +++ +TN++
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  307  NIYAIGDVIQGPMLAHKAEDEGIAVAEIIAGQSGHVNYDTIPGVVYTTPEVASIGKTEEQ  366
            ++YAIGD   G +LAHKA  E+   AE+I+GQ++ ++++++P V+++ PEVA  G TE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  367  LKENNIGYKIGKFSFMANSRAKAIDDAEGFVKILADEKSDRVLGAHIIGPHAGELIAEIG  426
             KE+      ++F+F AN+RA ++ DA+GFV+++A+ ++ RVLG +++GP+ + LIAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  427  IAMEFGASSEDIARTCHAHPTFSEAVKEAALSVDKRAIH  465
            +A+E GA++ED++ T HAHPT++E++ EAA +V  +A H
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

677) Mchl_1930 in NC_011757


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (952),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 195/465 (42%), Positives = 306/465 (66%), Gaps = 7/465 (1%)

Query  4    DLIVIGTGPGGYVCAIRAAQLGLKTAVVEKRATHGGTCLNVGCIPSKALLHASEAFEEAN  63
            DL+VIG+G+GGYV AIRAAQLG K  +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHFSELGIDV-GTPKLDLKKMQSFKQSGVDGNTKGVEFLLKKNKVDTYHGRGRIAGAGRV  122
            KH + +G+ V G  ++D+  +   K++ V+  T G+  LLK N V+   G + ++ A ++
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA-HI  157

Query  123  EVISDDGGNQLLETKNIVIATGSDVTRLPGVEIDEKTVVSSTGALELAEVPKRLVVIGAG  182
              I  ++ +Q++  K++++A GS    L ++ +D+K ++SST AL+L EVP++LVV+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGAEVTVIEYLDRVLPGMDGEVGKQFQRILAKQGMVFKLSTKVTGVET  242
             IGLELG+   ++GA VT++E  D +L+G D  + K  +R L   G+     + V G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG---  274

Query  243  GKKGRATVTVEPAQGGEPEKLEADVVLVAIGRVPYTEGLGLETVGVATDDKGRIEVDSHY  302
            G +    V V+   +G  E ++ D  LV+IGR P T  +GLE +GV  DD+G I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  ATNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGQSGHVNYGVIPNVVYTFPEVASVG  362
             TN+  +YAIGD  +G +LAHKA  E+   AE+++GQ++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEELKKDGIAYNVGKFPFTANGRAKANGTTDGFVKILADAQTDRVLGVHIVGADAGNL  422
             TE E K  G     ++FPF AN+RA + + +DGFV+++A+ +T RVLGV++VG++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IAEVAVAMEFAASAEDIARTCHAHPTLTEAIKEAALAVDKRAIHV  467
            IAE   A+E +A+AED++ T HAHPTL E++ EAA +V  +A H+
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

678) lpd in NC_012808


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (952),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 195/465 (42%), Positives = 306/465 (66%), Gaps = 7/465 (1%)

Query  4    DLIVIGTGPGGYVCAIRAAQLGLKTAVVEKRATHGGTCLNVGCIPSKALLHASEAFEEAN  63
            DL+VIG+G+GGYV AIRAAQLG K  +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHFSELGIDV-GTPKLDLKKMQSFKQSGVDGNTKGVEFLLKKNKVDTYHGRGRIAGAGRV  122
            KH + +G+ V G  ++D+  +   K++ V+  T G+  LLK N V+   G + ++ A ++
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA-HI  157

Query  123  EVISDDGGNQLLETKNIVIATGSDVTRLPGVEIDEKTVVSSTGALELAEVPKRLVVIGAG  182
              I  ++ +Q++  K++++A GS    L ++ +D+K ++SST AL+L EVP++LVV+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGAEVTVIEYLDRVLPGMDGEVGKQFQRILAKQGMVFKLSTKVTGVET  242
             IGLELG+   ++GA VT++E  D +L+G D  + K  +R L   G+     + V G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG---  274

Query  243  GKKGRATVTVEPAQGGEPEKLEADVVLVAIGRVPYTEGLGLETVGVATDDKGRIEVDSHY  302
            G +    V V+   +G  E ++ D  LV+IGR P T  +GLE +GV  DD+G I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  ATNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGQSGHVNYGVIPNVVYTFPEVASVG  362
             TN+  +YAIGD  +G +LAHKA  E+   AE+++GQ++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEELKKDGIAYNVGKFPFTANGRAKANGTTDGFVKILADAQTDRVLGVHIVGADAGNL  422
             TE E K  G     ++FPF AN+RA + + +DGFV+++A+ +T RVLGV++VG++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IAEVAVAMEFAASAEDIARTCHAHPTLTEAIKEAALAVDKRAIHV  467
            IAE   A+E +A+AED++ T HAHPTL E++ EAA +V  +A H+
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

679) BAbS19_II06640 in NC_010740


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (951),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 157/386 (41%), Positives = 266/386 (69%), Gaps = 3/386 (0%)

Query  29   IDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAEN  88
            +D +  + WKDGIV++L  G+  LLK + V ++ G+A + ++    +  +   Q +   +
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  89   IVIATGSVPVEIQALPFGGN-IISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSR  147
            +++A GS+PVE++++PF+ + IISSTEAL L+ +P++L VVGGGYIGLE+GTA+AK+G++
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  148  VTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAKGLSADGKALEIRTQ-DGAVK  206
            VT++E++D IL+  D+ LT+ V  +LK +G+ V+T++  +G    G  ++++ Q DG   
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEE  293

Query  207  AIEADKILVTVGRKPQSDGWGLSEIRLDMDGR-FIRIDDRCRTSMRGIYAIGDVTGEPML  265
             I+ D  LV++GRKP+++  GL +I + +D++ FI+I+++C+T++  +YAIGD +G  +L
Sbjct  294  IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLL  353

Query  266  AHRAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFP  325
            AH+A  ++ + AE+I+G +   D + +P V F+DPE+   GL+  EA+  G +  ++ FP
Sbjct  354  AHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFP  413

Query  326  FQANGRAMTMERDDGIVRVVARADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAA  385
            FQAN+RA+++   DG+V+VVA  +   +LG+Q VG+ +S L A    A+E GA  ED++ 
Sbjct  414  FQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSL  473

Query  386  TIHAHPTLGEGFAEASMKALGHALHV  411
            TIHAHPTL E + EA+   +GHA H+
Sbjct  474  TIHAHPTLPEPLMEAAEGVMGHATHM  499

680) RPD_0550 in NC_007958


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (952),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 190/466 (41%), Positives = 310/466 (67%), Gaps = 10/466 (2%)

Query  5    DLVIIGTGPGGYVCAIRAAQLGLKVAVVEKNATLGGTCLNVGCMPSKALLHASELFEEAG  64
            DL++IG+G+GGYV AIRAAQLG KV +V+K A LGG CLN GC+PSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HSFAKMGIGVPAPT-LDLPAMMNFKQQGIDGNVKGVEYLMKKNKIDvlvgrg--rvlgAG  121
            H+   MG+ V++   +D+P +++ K+  ++    G+  L+K N ++V+ G +       +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVEVTGNDGKAQTVETKSIVIATGSDVAKLKGIAIDEKRVVSSTGALSLDKVPERLIVVG  181
            K+ + +++   Q    K +++A GS    LK++++D+KR++SST AL L+ VP++L+VVG
Sbjct  159  KIKIEDEE---QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  182  AGVIGLELGSVWRRLGAQVTVVEFLDRILPGMDSEIVKQFQRILEKQGFAFKLGAKVTGV  241
            +G IGLELG+   ++GA+VT++E  D IL+G D+ + K  +R L   G++   +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  242  DSSGAKLAVKVEAAAGGNPETLEADVVLVAIGRVPYTEGLGLKEAGVALDERGRVVIDNH  301
            +++G  + V V+   +G+ E ++ D  LV+IGR P T  +GL + GV LD++G + I+N 
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  302  FATSVKGVYAIGDVVRGPMLAHKAEDEGVAVAELLAGKAGHVNYDVIPGVVYTTPEVSSV  361
              T++  VYAIGD   G +LAHKA  E+   AE+++G+ + ++++ +P V+++ PEV+  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  362  GKTEEDLKQAGIAYTVGKFPFTANGRSKVNQTTDGLVKILADAKTDRVLGVHIVGREAGE  421
            G TE + K+ G     ++FPF AN+R+     +DG+V+++A+ +T RVLGV++VG E + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  422  LIHEAAVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM  467
            LI EA   +E G++AEDL+ T HAHPT +E++ EAA +V  +A HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

681) Murru_3269 in NC_015945


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (951),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 194/444 (44%), Positives = 308/444 (70%), Gaps = 3/444 (0%)

Query  5    DVAIIGSGPGGYVAAIRCAQLGMKTAIIEKYAVLGGTCLNVGCIPSKALLDSSHHYEDAV  64
            D+ +IG+G+GGYVAAIR AQLG K  +++K A LGG CLN GCIPSKAL+ +S++  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFEEHGIDIPGEVKVNLKQMIARKQAVVDQTTKGVEFLMSKNKIDVYHGVGSFKDATHI  124
            KH +  G+ ++GEV+V++ +++ +K+++V++ T G+  L+  N ++V  G + + +A   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  125  NIKKDGKTETIEAKNSIIATGSKPSSLPFIEIDKERVITSTEALKLKEIPKHlivigggv  184
            +IK ++  + +  K+ I+A GS P  L  + +D+ R+I+STEAL+L+E+P+HL+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  iglelgqvYKRLGAEVTVVEFMDRIIPGMDGALSKELTKVMKKQKVKFNLSHKVKSVERK  244
            IGLELG  Y ++GA VT++E  D I++G D  L+K + + +K   +       V++ E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDEIIVKADDKKGKEVTIKGDYCLVSVGRKPYTDGLNAEAAGVKLDDKGRVEVNEHLQTN  304
            GDE+ V  +   GKE  I+ DYCLVS+GRKP T+ +  E  GV LDD+G + +N+  QTN
Sbjct  279  GDEVNVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  VSNIYAIGDVVKGAMLAHKAEEEGTMVAELLAGQKPHIDYNLIPGVVYTWPEVAAVGKTE  364
            + ++YAIGD   G +LAHKA  E+ + AE+++GQ++ ID++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKEEGVAYKSGQFPMRALGRARASMDIDGFVKILADKNTDEVLGVHMIGARCADLITE  424
             + KE G    S++FP +A +RA +  D DGFV+++A+KNT  VLGV+M+G+  + LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  GVTAMEFRASAEDISRMSHAHPTF  448
            +V A+E  A+AED+S   HAHPT+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTL  481

682) lpd in NC_012988


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  255 bits (951),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 194/465 (42%), Positives = 306/465 (66%), Gaps = 7/465 (1%)

Query  4    DLIIIGTGPGGYVCAIRAAQLGLKTAVVEKRATHGGTCLNVGCIPSKALLHASEAFEEAN  63
            DL++IG+G+GGYV AIRAAQLG K  +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHFSELGIDV-GTPKLDLKKMQSFKQSGVDGNTKGVEFLLKKNKVDTYHGRGRIAGAGRV  122
            KH + +G+ V G  ++D+  +   K++ V+  T G+  LLK N V+   G + ++ A ++
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA-HI  157

Query  123  EVISDDGGNQLLETKNIVIATGSDVTRLPGVEIDEKTVVSSTGALELAEVPKRLVVIGAG  182
              I  ++ +Q++  K++++A GS    L ++ +D+K ++SST AL+L EVP++LVV+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGAEVTVIEYLDRVLPGMDGEVGKQFQRILAKQGMVFKLSTKVTGVEV  242
             IGLELG+   ++GA VT++E  D +L+G D  + K  +R L   G+     + V G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG---  274

Query  243  GKKGRATVTVEPAQGGEPEKLEADVVLVAIGRVPYTEGLGLETVGVATDDKGRIEVDSHY  302
            G +    V V+   +G  E ++ D  LV+IGR P T  +GLE +GV  DD+G I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  ATNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGQSGHVNYGVIPNVVYTFPEVASVG  362
             TN+  +YAIGD  +G +LAHKA  E+   AE+++GQ++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEELKKDGIAYNVGKFPFTANGRAKANGTTDGFVKILADAQTDRVLGVHIVGADAGNL  422
             TE E K  G     ++FPF AN+RA + + +DGFV+++A+ +T RVLGV++VG++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IAEVAVAMEFAASAEDIARTCHAHPTLTEAIKEAALAVDKRAIHV  467
            IAE   A+E +A+AED++ T HAHPTL E++ EAA +V  +A H+
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

683) Celly_3023 in NC_015167


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  254 bits (949),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 201/477 (43%), Positives = 328/477 (69%), Gaps = 11/477 (2%)

Query  3    YNFLSTKNSANFTTLIKEKYMNSYDVAVIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGG  62
            Y++LS K+ +  T  +K KY+   D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG
Sbjct  22   YSYLS-KEESRMTGEVK-KYV---DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGG  75

Query  63   TCLNVGCIPSKALLDSSHHYEDAVKHFEEHGIDIPGEIKINLEKMISRKQAVVDQTTGGV  122
             CLN GCIPSKAL+ +S++  + +KH +  G+ ++GE+++++  ++ +K+++V++ T+G+
Sbjct  76   VCLNRGCIPSKALISASERVKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGI  134

Query  123  DFLMKKNNIDVYVGTGSFKDATHIS-IAGEETTEI-EAKHTIIATGSKPSTLPFIKLDKE  180
              L+K N ++V ++  ++   +HI+ I  E+  +I   K+ I+A GS P  L  + +D+ 
Sbjct  135  RTLLKGNGVEV-ISGEAYLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQK  193

Query  181  RVITSTEALKLKEVPKHliiigggviglelgQVYKRLGAEVSVVEYMDRIVPTMDKGVSK  240
            R+I+STEAL+L+EVP+HL+++GGG IGLELG  Y ++GA V+++E  D I++  D  ++K
Sbjct  194  RIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTK  253

Query  241  ELNKVLKKQKFKMNLSHKVKSVERKGDEVIVKADNKKGEEVTFTGDYCLVAVGRHAYTDG  300
             +++ LK   + +     V++ E  GDEV V  +    EE+ +  DYCLV++GR + T+ 
Sbjct  254  TVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGK  312

Query  301  LNAEAAGVKLTDRGLVDVNEHLQTNVSNIYAIGDVVKGAMLAHKAEEEGTFVAETIAGQK  360
            +  E  GV L D+G++ +N+  QTN+ ++YAIGD   G +LAHKA  E+ + AE I+GQ+
Sbjct  313  IGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQN  372

Query  361  PHINYNLIPGVVYTWPEVAAVGKTEEELKEAGVEYKVGQFPMRALGRSRASMDLDGFVKV  420
            + I+++ +P V+++ PEVA  G TE E KE G E   ++FP +A +R+ +  D DGFV+V
Sbjct  373  SVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQV  432

Query  421  LADKNTDEILGVHMVGARAADMIAEAVVAMEYRASAEDVSRMSHAHPTFTEAIKEAA  477
            +A+KNT  +LGV+MVG+  + +IAEAV A+E  A+AED+S   HAHPT+ E++ EAA
Sbjct  433  VAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

684) GM21_0718 in NC_012918


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  254 bits (947),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 320/466 (69%), Gaps = 11/466 (2%)

Query  7    DLVVIGAGPGGYVAAIRAAQLGMTVAVVEKRGTLGGVCLNEGCIPSKALLDSSELFHLAG  66
            DL+VIGAG+GGYVAAIRAAQLG  V +V+K + LGGVCLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   QRFSAHGIEVAPPT-LNLGQMMARKDDVVKKLTDGVAFLFKKNKIRSVNGTAKLARSDAG  125
            +  ++ G+ V+    +++ +++ +KD++V+KLTDG+  L+K N +  ++G A L+ ++  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH--  156

Query  126  GVHKVEVQGAQGGEEILA-KKVLLATGSDAVELPSLPFDGESVVSAREALCFDKVPGHLL  184
             + K+ +++    E+I++ K ++LA GS +VEL S+PFD   ++S+ EAL ++ VP HL+
Sbjct  157  -IAKIKIEDE---EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  185  VVGGGYIGLELGSVWLRLGAQVTVVEMLPRLIAGSDGQVAEALLRSLKKQGMRFLLGGKV  244
            VVGGGYIGLELG+   ++GA+VT++E    +++G+D  ++ ++ R LK  G+  + ++ V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  245  AGVEKREGSLLARVEVEGAVQEIACDKVLVAVGRRPltaglgleelgva-leKGRVLVNE  303
             G E+  + +  +V+V+G  + I CD  LV++GR+P T+ +GLE++GV   ++G + +N+
Sbjct  273  QGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  304  EYQTSVPGVYAIGDLIAGPMLAHKAMEEGAVCVERMRGEPSQVDYGCVPGVCYTWPEAAS  363
              QT++  VYAIGD  +G +LAHKA  E+ +  E + G+ S +D+  +P V ++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  364  VGKTEDALKEEGIPYKSGKYNFMGNGRAKCMDETEGFVKLLSDAEGTRLLGVHIFGPRAS  423
             G TE   KE G    S+++ F +N+RA  + +++GFV+++++ +  R+LGV++ GP  S
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  424  DMIAEAVTVMSFGGSSEDIALIMHAHPTLSEAMKEAALDVDKRAIH  469
             +IAEAV  +  G+++ED++L +HAHPTL+E++ EAA +V  +A H
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

685) Mext_1648 in NC_010172


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  254 bits (950),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 194/465 (42%), Positives = 306/465 (66%), Gaps = 7/465 (1%)

Query  4    DLIVIGTGPGGYVCAIRAAQLGLKTAVVEKRATHGGTCLNVGCIPSKALLHASEAFEEAN  63
            DL+VIG+G+GGYV AIRAAQLG K  +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHFSELGIDV-GTPKLDLKKMQSFKQSGVDGNTKGVEFLLKKNKVDTYHGRGRIAGAGRV  122
            KH + +G+ V G  ++D+  +   K++ V+  T G+  LLK N V+   G + ++ A ++
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA-HI  157

Query  123  EVISDDGGNQLLETKNIVIATGSDVTRLPGVEIDEKTVVSSTGALELAEVPKRLVVIGAG  182
              I  ++ +Q++  K++++A GS    L ++ +D+K ++SST AL+L EVP++LVV+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGAEVTVIEYLDRVLPGMDGEVGKQFQRILAKQGMVFKLSTKVTGVET  242
             IGLELG+   ++GA VT++E  D +L+G D  + K  +R L   G+     + V G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG---  274

Query  243  GKKGRATVTVEPAQGGEPEKLEADVVLVAIGRVPYTEGLGLETVGVATDDKGRIEVDSHY  302
            G +    V V+   +G  E ++ D  LV+IGR P T  +GLE +GV  DD+G I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  ATNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGQSGHVNYGVIPNVVYTFPEVASVG  362
             TN+  +YAIGD  +G +LAHKA  E+   AE+++GQ++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEELKKDGIAYNVGKFPFTANGRAKANGTTDGFVKILADAQSDRVLGVHIVGADAGNL  422
             TE E K  G     ++FPF AN+RA + + +DGFV+++A+ ++ RVLGV++VG++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IAEVAVAMEFAASAEDIARTCHAHPTLTEAIKEAALAVDKRAIHV  467
            IAE   A+E +A+AED++ T HAHPTL E++ EAA +V  +A H+
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

686) lpdA in NC_003911


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  254 bits (950),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 190/453 (42%), Positives = 301/453 (67%), Gaps = 9/453 (1%)

Query  5    DVIIIGAGPGGYVCAIRCAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHASHSLHEAQ  64
            D+++IGAG+GGYV AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ AS+ + + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFAKMGLKGKSP-SVDWKQMLAYKDEVIEGNTKGIEFLFKKNKIDWIKGWASIPAA--G  121
            H    MGLK  +   VD  +++  KD +++  T GI  L+K N ++ I G A +  A  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVQVGDDTH--EAKNIIIASGSEPASLPGVEVDEKTVVTSTGALELGKIPKSLVVIGAGV  179
            K+++ D+ +    K++I+A GS P  L ++  D+K +++ST AL+L  +P+ LVV+G+G 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  IGLELGSVYARLGAEVTVVEFLDVITPGMDGEVQKTFQRILKKQGLTFVMGAAVQKTEIA  239
            IGLELG+ YA++GA VT++E  D I +G D  + KT +R LK  G+T + +A VQ  E +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  RGKAKVTYKLLKKDTEHEIEADTVLVATGRKPYTAGLGLDKLGIEMTQRGQIKVGKDWQT  299
             +  +V  ++   + E+ I+ D  LV+ GRKP T+ +GL+++G+ + ++G IK+ +  QT
Sbjct  279  GDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  300  NVPGIYAIGDVIEGPMLAHKAEDEGMAAAEQVAGKHGHVNYGVIPGVIYTTPEVANVGAT  359
            N+  +YAIGD   G +LAHKA  E+  AAE ++G+++ +++  +P VI++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  360  EESLKAEGRAYKVGKFMFMGNGRAKANFASDGFVKILADKETDRILGAHIIGPAAGELIH  419
            E   K  G     ++F F +N+RA +   +DGFV+++A+K+T R+LG +++GP  + LI 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  420  EVCVAMEFGASAEDLALTCHAHPTYSEAVREAA  452
            E   A+E GA+AEDL+LT HAHPT +E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

687) BJAB0715_01922 in NC_021733


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 306/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEEQHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDVQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFNGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V++G A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNSQVLSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q++S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVITDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ VITDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICIEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

688) lpd in NC_008571


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  253 bits (945),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 190/452 (43%), Positives = 314/452 (70%), Gaps = 5/452 (1%)

Query  5    DVTIIGSGPGGYVGAIRCAQLGLKVAIVERYSTLGGTCLNVGCIPSKAWLEASEHNYKLK  64
            D+ +IG+G+GGYV+AIR AQLG KV +V++ + LGG CLN GCIPSKA + ASE+   +K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HQFEKFGINVK-EANVDILKMNQRVQDVVQEIINGVDYLMKKNKVAVYEGHGTIKDKNTI  123
            H  +  G++V  E +VD+  + ++ +++V+ + +G+  L+K N V V  G++ + + +  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  VIKGEDKTETIATDKIIIATGSKPASLPNIKIDKKRIISSTEALALREIPKHLMvvgggv  183
             IK ED  + ++   +I+A GS P  L ++ +D+KRIISSTEAL L+E+P+HL+VVGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  igveigsvFARLGSKVSIVEYFDSLIATMDGALGHQLHRSLRKQGIEFYLKHKVTNATAT  243
            IG+E+G+ +A++G+KV+I+E  D++++  D  L   + R L+  GI       V  +  T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  DNKVVLKAENLSDKEEMSLDGDYCLMAIGRKPYTANLGLENIEVEINEKGQIIVDENLET  303
            ++ V +  + + +KEE+ ++ DYCL++IGRKP T+++GLENI V ++++G I ++++ +T
Sbjct  279  GDEVNVHVQ-VDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  NVKGIYAIGDVIRGAMLAHKASEEGVFVAETIVGQKPYINYSLIPNIVYTQPEVAGVGLT  363
            N+  +YAIGD   G +LAHKAS E+ + AE I GQ++ I++  +P +++++PEVA  GLT
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEELKKANKNIKIGSFPYKANARAKISMDTDGFIKVIADKQTDEILGVHMIGPRIADSYT  423
            E E K    +   + FP++ANARA    D+DGF++V+A+K+T  +LGV+M+GP ++   +
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EAVVAMEFRASAEDIARMSHGHPTFSETFKEA  455
            EAV A+E  A+AED++   H+HPT++E + EA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

689) SPISAL_00205 in NC_021291


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  253 bits (946),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 318/466 (69%), Gaps = 3/466 (0%)

Query  124  DVLVIGAGPGGYSAAFRAADLGLRTILIERYASLGGVCLNVGCIPSKALLHAAKVIDEAE  183
            D+LVIGAG+GGY AA+RAA+LG + +L+++ A LGGVCLN GCIPSKAL+ A+  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  184  FFADHGIQF-GKPEINLEKLESWKSSvvgkltgglvglAKQRQVEVVTGAAQFVDDHHVR  242
                 G++  G  ++++  +  WK ++V KLT+G+  L K   VEV++G A + + H  +
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  243  VATADGERTISFKNGIIAAGSRPIAPPGFDLDHPRIMDSTDALKLEEVPKRMLVVGGGII  302
            +   D E+ +S+K+ I+A GS P+   +  +D+ RI+ ST+AL+L+EVP++++VVGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  303  GLEMASVYHALGSEITVVELADRLMAGADPDIVKPFRKIIDKRYANIFLNTKVAGLEADD  362
            GLE+++ Y  +G+ +T++E +D +++G+DP + K  ++ +      ++ ++ V G E  +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  363  DGVTVKLEGDKAPAEDRFDRVLVSVGRRPNTDGLNIEATGVKLQDNGCIEADEQMRTAVP  422
            D V V ++ D      + D  LVS+GR+PNT+ + +E  GV L+D+G I  +++ +T + 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  423  HLFAIGDLIGQPMLAHkavhegkvaaevaageksaFDARVIPSVAYTDPEVAWVGVTQEQ  482
            H++AIGD  G  +LAHKA  E+K+AAEV +G++S +D + +P V ++DPEVA  G+T+ +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  483  AKAEGMDVDIGNFPWAANGRSLSLGRDEGITKLIFERNTERVIGAGIVGPNAGDLIAEVG  542
            AK  G +   + FP  AN+R+LS++  +G+ +++ E+NT RV+G  +VGP+ + LIAE  
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  543  LAIEMGADMHDIGLTIHPHPTISETVGMAAEAAAGTLTDLYIPKKK  588
            +AIE GA+ +D++LTIH+HPT++E +  AAE+  G  T++ + KK+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM-LNKKQ  504

690) G655_25475 in NC_020912


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  253 bits (944),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 305/466 (66%), Gaps = 13/466 (2%)

Query  5    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  64
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  122
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L     
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  123  VSVDLADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELAEVPRHLVVIGA  182
              + + D  +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  158  AKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  183  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  242
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  243  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  301
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  302  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  361
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  362  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  419
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  420  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  465
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

691) lpd3 in NC_011770


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  253 bits (945),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 305/466 (66%), Gaps = 13/466 (2%)

Query  6    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  65
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  123
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L     
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  124  VSVDLADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELAEVPRHLVVIGA  183
              + + D  +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  158  AKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  184  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  243
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  244  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  302
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  362
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  420
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  421  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  466
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

692) Cycma_2502 in NC_015914


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  252 bits (943),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 191/452 (43%), Positives = 313/452 (70%), Gaps = 5/452 (1%)

Query  3    DLIVIGSGPGGYVAAIRAAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSEHYHNAA  62
            DL+VIG+G+GGYVAAIRAAQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  63   HTFENHGINLSS-LKVNFKQMVSRKRDVVKQNVEGIQYLMKKNKIDVHQGIGSFKDKNTI  121
            H+ +  G+++S+ ++V+  ++V +K ++V++  +GI+ L+K N ++V  G  ++     I
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  122  IVTKEDGKTEELTAKKTIIATGSKPANLPFINLDKERIITSTEALELKEVPKHlviiggg  181
               K ++  + ++ K  I+A GS P +L  + +D+ RII+STEAL+L+EVP+HLV++GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  182  viglelgsvYARLGAKVSVVEFMNGIIPTMDKTMGKELQKSLKKLGFEFYLQHKVTGVER  241
             IGLELG+ YA++GAKV+++E  + I++  D  + K +++ LK +G+    +  V G E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  242  KGKEVTVTAENSKNETISIKGDYVLVSIGRKPYTDGLNAAAAGVKINDKGQVEVDENLKT  301
             G EV V  +   +E I I+ DY LVSIGRKP T+ +     GV ++D+G + ++++ +T
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  302  SADNIYAIGDVVKGAMLAHKAEEEGVFVAETLAGQKPHVNYLLIPGVVYTWPEVASVGYT  361
            + +++YAIGD   G +LAHKA  E+ + AE ++GQ++ +++  +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  362  EEQLKEKGVKVKTGKFPFMASGRARASGDVDGLVKVLADAETDEILGVHMIGPRAADMIA  421
            E + KEKG    +++FPF A++RA + +D DG+V+V+A+ +T  +LGV+M+GP  + +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  422  EAVVAMEYRASAEDIARMSHAHPTYTEAFKEA  453
            EAV A+E  A+AED++   HAHPT  E++ EA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

693) Pfl01_3466 in NC_007492


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  252 bits (942),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 193/449 (43%), Positives = 300/449 (67%), Gaps = 14/449 (3%)

Query  8    LLIIgggpggYVTAIRAGQLGISTILVEGESLGGTCLNIGCIPSKALIHVAEQFHQTQHH  67
            LL+IG+G+GGYV+AIRA+QLG   +LV+   LGG CLN GCIPSKALI  +E+    +H 
Sbjct  42   LLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASER---VKHI  98

Query  68   NQHSALGISVSAPT-LDITKSVEWKDGIVDRLTTGVAALLKKNKVQVINGWAKVIDGK--  124
            ++ +++G+ VS+   +D+   V WKDGIV++LT G+ +LLK N V+VI+G A + ++   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  125  --TVEVGDTRIQCEHLVLATGSKSVNlpilp-iggpiiSSTEALAPKSVPKRLIVVGGGY  181
               +E  +  +   +L+LA GS +V+L  +P     IISSTEAL  + VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  182  IGLELGIAYRKLGAEVSVVEAQDRILPAYDAELTQPVHDALKQLGVKLYLKHSVLGFDGT  241
            IGLELG AY K+GA V+++E+ D IL++ D+ LT+ V   LK++G+ +     V G + T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  242  ---LQVR-DPNGDTLNLETDQVLVAVGRKPNTQGWNLEALNLDMNGSA-IKIDSRCQTSM  296
               ++V+ + +G    ++ D  LV++GRKPNT    LE + + +++ + IKI+++CQT++
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  297  RNVYAIGDLSGEPMLAHRAMAQGEMVAELISGKTREFNPTAIAAVCFTDPELVVVGKTPD  356
             +VYAIGD +G  +LAH+A  ++ + AE+ISG+   ++  A++ V F+DPE+   G T  
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  357  EAKAAGLDCIVSNFPFAANGRAMTLESKTGFVRVVARRDNHVIVGWQAVGVGVSELSTAF  416
            EAK  G + + S FPF AN+RA+++    GFV+VVA ++   ++G Q VG  VS L +  
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  417  AQSLEMGARLEDIGGTIHAHPTLGEAVQE  445
              ++E GA  ED++ TIHAHPTL E++ E
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLME  487

694) lpd3 in NC_008463


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  252 bits (942),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 309/466 (67%), Gaps = 13/466 (2%)

Query  6    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  65
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  123
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L  E++
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-TEAH  156

Query  124  VGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELAEVPRHLVVIGA  183
            ++    ++ +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  184  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  243
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  244  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  302
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  362
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  420
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  421  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  466
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

695) RSPPHO_02123 in NC_017059


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  252 bits (940),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 200/464 (44%), Positives = 308/464 (67%), Gaps = 8/464 (1%)

Query  5    DVIVIgggpggYVCAIRAAQLGLKVACVEKRATLGGTCLNEGCIPSKALLHSSHLYEEAR  64
            D++VIG+G+GGYV AIRAAQLG KV  V+K A LGG CLN GCIPSKAL+ +S+   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   LHFASHGIGVSG-LTLDLAQMMARKDEVIASNTKGIDFLFRKHKIKRVVGTARLTAQPGH  123
             H  + G+ VSG + +D+++++ +KD ++   T GI  L++ + +  + G A LT   +H
Sbjct  100  -HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE--AH  156

Query  124  VV-VTTETGEQTLSATSLVLATGSEPTELPGVTVDEERILSSTGALALKRVPQSLVVIGA  182
            +  +  E  EQ +S   L+LA GS P EL ++  D+ RI+SST AL L+ VP+ LVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  183  GVIGLELGSVWRRLGAEVTVVEYLDHILPPLDGEVRQTMQKLLTGQGLTFRLGQAVTAAE  242
            G IGLELG+   ++GA VT++E  D IL+  D  + +T+++ L   G+T   +  V ++E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  243  RTESGVRLTLTPAGGGEPEILEAEAVLVAVGRRPFTQGLGLEEAGVALTPRGFVAVDEHF  302
             T   V + +    +G  EI++ +  LV++GR+P T  +GLE+ GV L  +GF+ +++  
Sbjct  277  NTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  QTNIEGVFAIGDVIGGMMLAHKAEEEGVALAEMLAGESSDIDHNTIPAVVYTSPEAASVG  362
            QTNIE V+AIGD  GG +LAHKA  E+   AE+++G++S ID +++P V+++ PE A  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEGLKARGIAYKVGKFPFMANGRAKANGDTDGFVKILADATTDRVLGCHIVGPQAGDL  422
             TE   K +G     ++FPF AN+RA + +D+DGFV+++A+  T RVLG ++VGP+ + L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IMEVVAAMVFGASAEDIARTCHAHPQLGEAIKEAALAVHKRAVH  466
            I E V A+  GA+AED++ T HAHP L E++ EAA +V  +A H
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

696) lpd in NC_012489


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  252 bits (941),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 197/472 (42%), Positives = 330/472 (70%), Gaps = 6/472 (1%)

Query  1    MTSTTSQTADVLVLgggpggYVAAIRAAQLGFSVTCIEADKTLGGTCVTVGCIPSKALLQ  60
            MT+   +  D+LV+G+G+GGYVAAIRAAQLG  V  +     LGG C+  GCIPSKAL+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALIS  90

Query  61   SSEHYEWLRLHAAEHGVKVEGAT-VDLPAMMARKTDVVAQNTKGIEFLFRKNKITWAKGF  119
            +SE+   ++ HA   G+KV G   VD+P ++ +K ++V + T GI  L++ N +    G 
Sbjct  91   ASERVKHIK-HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  120  GTLKTGNVVEVK-DTDGNVTSWQGKHVIIATGSVPVQLPFLPFDEQRVLSNVGALQIPEV  178
            + L  +++  +K + + ++ S   K++I+A GS+PV+L  +PFD++R++S+  ALQ+ EV
Sbjct  150  AYLTEAHIAKIKIEDEEQIFSY--KDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  179  PKHlivigggviglelgsvWRRLGAKVTVVEFAPTILPGNDDDVIKEADKILRKQGLEIH  238
            P+HL+V+GGG IGLELG+   ++GAKVT++E + TIL+G D  + K   + L+  G+ + 
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVI  267

Query  239  TGTKVTGADVRADGVTIHAEKDGAALSFDGDYVLVSVGRKPSlsgvdaaalglalgqrgE  298
            T++ V G++  +D V +H + DG    ++ DY LVS+GRKP+ + ++   +G+ L+++G 
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  299  IAVNDQMRTNLPNVFAIGDVVGGKLLAHKAEDEGVIAAEVIAGKPVHMHYRTMPGVVYTW  358
            I +N++ +TN+ +V+AIGD  GG LLAHKA  E+ IAAEVI+G+   +++++MP V+++ 
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  359  PEIATVGLTEQEVKASGRAYRVGKFPFSANGRARTMGETQGFVKFVVDKDSDEILGCHMI  418
            PE+A  GLTE+E K  G     ++FPF AN+RA ++++++GFV+ V +K++  +LG +M+
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  419  GPHVADNLAQVVLAMEYRGSAEDIAITVHSHPTLSETVKEAALSALGRALHM  470
            GP+V+  +A+ V+A+E  ++AED+++T+H+HPTL+E + EAA + +G+A HM
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

697) RPN_02635 in NC_016913


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  252 bits (940),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 186/458 (41%), Positives = 320/458 (70%), Gaps = 16/458 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEddkssvvtsdvvLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ D+K  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSV  452
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGV  492

698) A1G_04340 in NC_009882


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  252 bits (940),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 186/458 (41%), Positives = 320/458 (70%), Gaps = 16/458 (3%)

Query  5    DLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAAL  64
            DL+VIG+G++GY ++IRAAQLG KV  ++K++ LGG CLN GCIPSKAL+++SE+    +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASER-VKHI  98

Query  65   KHFENIG--ITADVKLDLQKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIV  122
            KH + +G  ++++V++D+  ++  KD +V  LT GI +L+  N V  I GEA ++ ++I 
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EV---NKEQI-KAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGY  178
             +   + EQI   K+++++ GS  +E+ ++ +D+  I+SST AL+L  VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  IGLELGSVWRRLGAKVTVIEYAPSIV----PMLDKEIATQFMKLQQKQGIEFKLNTKVLS  234
            IGLELG+   ++GAKVT++E + +I+    P+L K +  ++  +    GI    ++ V +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI----GITVITDALVQG  274

Query  235  AEVKSGKVNLTIEEddkssvvtsdvvLMAVGRKAYTQNLGLESVGIITDKQGSIEINDQF  294
            +E  ++ VN+ ++ D+K  ++  D  L+++GRK+ T ++GLE++G++ D QG I IN++ 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  295  QTAVSNIYAVGDVVKGAMLAHKaeeeavaaveIMAGQAGHVNYNLIPSVIYTYPEVASVG  354
            QT + ++YA+GD   G +LAHKA  EA  A E+++GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  355  ETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTL  414
             TE + KEKG +   ++FPF AN+RA +++ ++G V+++A+ +T RVLG +++G++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  415  IAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSV  452
            IA     +E GA +ED++ T HAHPTL+E++ EAA +V
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGV  492

699) acoD in NC_020547


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNSQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

700) PADK2_25630 in NC_018080


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 309/466 (67%), Gaps = 13/466 (2%)

Query  5    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  64
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  122
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L  E++
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-TEAH  156

Query  123  VGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELVEVPRHLVVIGA  182
            ++    ++ +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  183  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  242
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  243  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  301
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  302  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  361
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  362  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  419
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  420  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  465
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

701) lpd3 in NC_017548


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 309/466 (67%), Gaps = 13/466 (2%)

Query  6    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  65
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  123
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L  E++
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-TEAH  156

Query  124  VGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELVEVPRHLVVIGA  183
            ++    ++ +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  184  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  243
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  244  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  302
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  362
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  420
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  421  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  466
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

702) lpd3 in NC_017549


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 309/466 (67%), Gaps = 13/466 (2%)

Query  6    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  65
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  123
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L  E++
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-TEAH  156

Query  124  VGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELVEVPRHLVVIGA  183
            ++    ++ +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  184  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  243
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  244  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  302
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  362
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  420
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  421  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  466
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

703) lpd3 in NC_002516


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 309/466 (67%), Gaps = 13/466 (2%)

Query  6    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  65
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  123
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L  E++
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-TEAH  156

Query  124  VGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELVEVPRHLVVIGA  183
            ++    ++ +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  184  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  243
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  244  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  302
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  362
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  420
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  421  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  466
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

704) M062_25490 in NC_021577


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 309/466 (67%), Gaps = 13/466 (2%)

Query  6    DVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAAS  65
            D++VIGAG+GGY AAIRA+QLG KV  V+ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   GGEFARLGIRVSPEL--DLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGR  123
             ++   +G++VS E+  D+++++K KD  V  LT G+  L++ + V+ I G A L  E++
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL-TEAH  156

Query  124  VGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELVEVPRHLVVIGA  183
            ++    ++ +  +  +D+++A GS P  L ++P D++RI+ ST AL+L EVP HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  184  GVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGTRVVAAR  243
            G IGLELG+   ++GA+VT+LE  + I +G D   ++T++R L   G+   + T  +   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT--VITDALVQG  274

Query  244  SGEQGVELDLQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLENQGQ-  302
            + + G E++++   +G  E +Q DY LV+IGR+P T  +GLE +G+  D +G +  + + 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  RSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVG  362
            ++    V  IGD ++G +LAHKA  EA +  E I+G+ + ++ + +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  LGEEQLQAARREYKV--GRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVS  420
            L E +  A  + Y    +RFPF AN+RA    +++GF++++++  + +VLGV+M+GP VS
Sbjct  395  LTEKE--AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  421  EMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGRAMQ  466
             +I+EA  A+E +A+AEDL+LT H+HPT +E+L +AA +V G+A +
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

705) lpdA2 in NC_003047


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 315/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLEALGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V+ + ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMivvg  182
            +  +  +EEQ++  K++++A GS    + ++  +FD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGA  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G+
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH  302
             ++GD  +V  +   +G    ++ +  L++ GRKP+T+ +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

706) lpdA2 in NC_020528


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 315/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLEALGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V+ + ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMivvg  182
            +  +  +EEQ++  K++++A GS    + ++  +FD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGA  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G+
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH  302
             ++GD  +V  +   +G    ++ +  L++ GRKP+T+ +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

707) Hhal_1035 in NC_008789


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (939),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 194/467 (42%), Positives = 324/467 (70%), Gaps = 6/467 (1%)

Query  128  DVVVLGAGPGGYSAAFRAADLGLKVVLVDRYPVLGGVCLNVGCIPSKALLHAAKVVDEAD  187
            D++V+GAG+GGY AA+RAA+LG KVVLVD+ + LGGVCLN GCIPSKAL+ A+  V +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  188  QFAAHGIAF-GKPKIDLEQLNDWKRGIIKQLTQGLAGIAKQRKVEVVTGEAAFADAHHLH  246
            +  + G+   G  ++D+ ++  WK GI+++LT+G+  + K   VEV++GEA +++AH   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  247  VSGDDGARTISFRHCIVAAGSRPAIPPSLAVDDPRVMDSTGALKLEEIPDRllvvgggii  306
            +  +D  + +S+++ I+A GS P    S++ D+ R++ ST AL+L+E+P++L+VVGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  307  glEMASVYSGLGSKVTVVELSDRLMPGADPDLVKVLRKRLAKRCEAIHLNTEVTGVKANK  366
            GLE+++ Y+ +G+KVT++E SD +++G+DP L K ++++L     ++  ++ V G     
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  367  KSLTVTMNGQDAPESDRFDRILVAVGRRPNSDRIGVEAAGLAPGEDGCLSVDEHMRTAVP  426
              + V ++ ++  E  + D  LV++GR+PN+++IG+E  G+  +++G + +++  +T + 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  427  HIHAVGDIVGQPMLAHKAVHEGKVAAEVIAGEKSAWDARAIPSVAYTDPEVAWVGLTEEQ  486
            H+ A+GD  G  +LAHKA  E+K+AAEVI+G++S  D +A+P V ++DPEVA  GLTE +
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  487  AKAEGVAYEKGA--FPWAANGRALSLDASDGVSKILFDAETgrvlgggivgpgagdligE  544
            AK  G  YE  +  FP  AN+RALS+  +DG  +++ + +T RVLG  +VGP  + LI+E
Sbjct  400  AKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  545  IGLALEMGADAHDIGLTVHPHPTLSETVAMAAEMASGSITDLLPPKK  591
              +A+E GA+A+D++LT+H+HPTL+E +  AAE   G  T++L  K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

708) ABK1_2197 in NC_017162


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

709) ACICU_01738 in NC_010611


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

710) BJAB07104_02013 in NC_021726


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

711) BJAB0868_01861 in NC_021729


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

712) ABTJ_01970 in NC_017847


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

713) ABZJ_01903 in NC_017171


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

714) ABTW07_1951 in NC_017387


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

715) M3Q_2089 in NC_018706


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 187/464 (41%), Positives = 305/464 (66%), Gaps = 8/464 (1%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAKEKIEV  125
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V+SG A LT    I  
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAK  159

Query  126  TDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAI  185
               +++ Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  186  GSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQIEN  245
            G E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ +   
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  246  EQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVA  305
            ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  306  GLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTE  365
             +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GLTE
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGLTE  397

Query  366  NAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQG  425
            + AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I  
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  426  --FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
              FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  458  AVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

716) Fraau_1674 in NC_017033


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  251 bits (937),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 196/471 (42%), Positives = 315/471 (67%), Gaps = 11/471 (2%)

Query  4    KF-DVVVIGAGPAGYVAAIRAAQLGLKVAVVDAFAGKDGKQALGGTCLNVGCIPSKALLD  62
            K+ D++VIGAG++GYVAAIRAAQLG KV +VD       K  LGG CLN GCIPSKAL+ 
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVD-------KAELGGVCLNRGCIPSKALIS  90

Query  63   SSRQFYNLAHNLPVHGITVE-NAKIDLKTFIGRKDKIVKQFTGGIGQLFKANKVTPFFGK  121
            +S +  ++ H   + G+ V  + ++D+   + +KD IV+++T+GI  L+K+N V  + G 
Sbjct  91   ASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLKGNQVEITDPEGKTSTISGTNVILASGSVPIELPFAKFDSKYIIDNAGALDLTEVP  181
            +  L   ++     E+    +S  ++ILA GS+P+EL    FD K II ++ AL+L EVP
Sbjct  150  A-YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWNRLGSDVTVLEALPAFLSvadadvakiaakEFAKQGLKIKV  241
            ++L V+G+G IGLELG+   ++G+ VT+LE+  ++LS +D+ ++K   +++   G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  GAKASGVEIKNDEVHLSYADKDGEHVLIVDKLLVAVGRRAYTEGLLAENVGVKLDERGRI  301
            +A   G E   DEV++     + E+++  D  LV++GR++ T  +  EN+GV LD++G I
Sbjct  269  DALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  302  VVDDHNHTGVDGVWAIGDAVRGPMLAHKGSEEGVAVAEWIAGKAGHIDFDTIPWVIYTEP  361
             +++  +T ++ V AIGD   G +LAHK+S E+   AE I+G+ + IDF+++P VI+++P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  362  EIAWAGKTEAQLKEAGIPYKVGTFPFAAVGRAVAMNEAVGQVKVLAHADTDRVLGVHMVG  421
            E+A +G TE + KE G     + FPF A +RA+++++A G V+V+A+ +T RVLGV+MVG
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  422  PGVSELIAEAVVTMEFKGSSEDLARIVHAHPTLSEAVHEAALAVDKRAIHK  472
            P VS LIAEAV ++E  +++EDL+  +HAHPTL+E++ EAA +V  +A H 
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

717) TtJL18_0169 in NC_017587


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (934),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 217/470 (47%), Positives = 331/470 (71%), Gaps = 12/470 (2%)

Query  1    MKTY-DLIVIGTGPGGYHAAIRAAQLGLKVLaveagevggvCLNVGCIPTKallhaaetl  59
            +K Y DL+VIG+G+GGY AAIRAAQLG KV+ V+ +E+GGVCLN GCIP+KAL+ A+E +
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  60   hhlKVAEGFGLKAKPEL--DLGRLGAWRDQvvkkltggvgtllkgNGVELLRGFARLAGP  117
             H+K A+  GLK   E+  D+  +  W+D +V+KLT+G+ TLLKGNGVE++ G A L+ +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  118  K----EVEVNGERFAAKSLILATGSEPMTLPGFPFGED-VWDSTRALRVEEGIPKRLLVI  172
                  +E + + F+ K LILA GS P+ L + PF++  +  ST AL+++E +P++L+V+
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVV  214

Query  173  GGGAVGLELGQVYRRLGAEVTLIEYMLEILPQGDPETAALLRRALEKEGIRVRTKTKAVG  232
            GGG +GLELG  Y ++GA VT++E    IL+  DP  +  ++R L   GI V T +   G
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  233  YEKKKDGLHVRLEPAeggegeevvvDKILVAVGRKPRTEGLGLEKAGVKVDERGFIQVNA  292
             E+  D ++V+++     E  +   D  LV++GRKP T  +GLE+ GV +D++GFI++N 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQC--DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  293  RMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSVFDYQ-VPSVVYTSPEWAG  351
            + +T++  VYAIGD A   LLAHKA  E+ IAAE  +G++SV+D+Q +P V+++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  352  VGLTEEEARKAGYKVKVGKFPFSASGRALTLGGAEGMVKVVGDAETDLLLGVFIVGPQAG  411
             GLTE EA+  GY    ++FPF A++RAL++++A+G V+VV++ +T  +LGV +VGP+ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  412  EFIaeatlalemaatVSDLALTVHPHPTLSESLMEAAEAFHKQAIHILNR  461
             +IAEA +A+E +A   DL+LT+H+HPTL+E+LMEAAE+   +A H+LN+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

718) RA0C_0698 in NC_017045


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (934),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 200/463 (44%), Positives = 314/463 (68%), Gaps = 4/463 (0%)

Query  5    DVTVIGSGPGGYVAAIRCAQLGFKTAIIEKYPTLGGTCLNVGCIPSKALLDSSEHFENAK  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFANHGIVINEPKADLARMVERKNEVVEQTTKGINFLMDKNKITVFEGVGSFETATKIK  124
            H  +    V  E + D++ +V +K+ +V++ T GI  L+  N + V+ G  ++ T + I 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VIKNDGSTESIESKYTIIATGSKPSSLPFISLDKERIITSTEALNLKEIPKHlivigggv  184
             IK ++  + +  K  I+A GS P  L  +++D+ RII+STEAL+L+E+P+HL+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  iglelgsvYKRLGSEVTVVEYLDKIIPGMDGSLSKELQKVLKKQGMKFMLSTAVSAVERK  244
            IGLELG+ Y ++G+ VT++E  D I++G D  L+K +++ LK  G+  +  + V + E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDAVVVTAKDKKGAEVSVEGDYCLVSVGRRPYTEGLGLENAGVDLDERGRVKVNDHLQTN  304
            GD V V   +  G E  ++ DYCLVS+GR+P T  +GLEN GV LD++G +K+N+  QTN
Sbjct  279  GDEVNVHV-QVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  VSNIYAIGDVVKGAMLAHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGVGKTE  364
            + ++YAIGD   G +LAHKA  E+ + AE ++GQ++ I+++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKEEGVSYKVGSFPMRALGRSRASGDIDGLIKVLADEKTDEILGVHMIGARAADMIAE  424
             + KE G     + FP +A +R+ + +D DG+++V+A+ +T  +LGV+M+G+  + +IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVVAMEFRASAEDISRISHAHPTFTEAIKEAALDATGKRALHM  467
            AV A+E  A+AED+S   HAHPT+ E++ EAA +  G +A HM
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMG-HATHM  499

719) Riean_0476 in NC_014738


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (934),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 200/463 (44%), Positives = 314/463 (68%), Gaps = 4/463 (0%)

Query  5    DVTVIGSGPGGYVAAIRCAQLGFKTAIIEKYPTLGGTCLNVGCIPSKALLDSSEHFENAK  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFANHGIVINEPKADLARMVERKNEVVEQTTKGINFLMDKNKITVFEGVGSFETATKIK  124
            H  +    V  E + D++ +V +K+ +V++ T GI  L+  N + V+ G  ++ T + I 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VIKNDGSTESIESKYTIIATGSKPSSLPFISLDKERIITSTEALNLKEIPKHlivigggv  184
             IK ++  + +  K  I+A GS P  L  +++D+ RII+STEAL+L+E+P+HL+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  iglelgsvYKRLGSEVTVVEYLDKIIPGMDGSLSKELQKVLKKQGMKFMLSTAVSAVERK  244
            IGLELG+ Y ++G+ VT++E  D I++G D  L+K +++ LK  G+  +  + V + E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDAVVVTAKDKKGAEVSVEGDYCLVSVGRRPYTEGLGLENAGVDLDERGRVKVNDHLQTN  304
            GD V V   +  G E  ++ DYCLVS+GR+P T  +GLEN GV LD++G +K+N+  QTN
Sbjct  279  GDEVNVHV-QVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  VSNIYAIGDVVKGAMLAHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGVGKTE  364
            + ++YAIGD   G +LAHKA  E+ + AE ++GQ++ I+++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKEEGVSYKVGSFPMRALGRSRASGDIDGLIKVLADEKTDEILGVHMIGARAADMIAE  424
             + KE G     + FP +A +R+ + +D DG+++V+A+ +T  +LGV+M+G+  + +IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVVAMEFRASAEDISRISHAHPTFTEAIKEAALDATGKRALHM  467
            AV A+E  A+AED+S   HAHPT+ E++ EAA +  G +A HM
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMG-HATHM  499

720) G148_1144 in NC_020125


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (934),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 200/463 (44%), Positives = 314/463 (68%), Gaps = 4/463 (0%)

Query  5    DVTVIGSGPGGYVAAIRCAQLGFKTAIIEKYPTLGGTCLNVGCIPSKALLDSSEHFENAK  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFANHGIVINEPKADLARMVERKNEVVEQTTKGINFLMDKNKITVFEGVGSFETATKIK  124
            H  +    V  E + D++ +V +K+ +V++ T GI  L+  N + V+ G  ++ T + I 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VIKNDGSTESIESKYTIIATGSKPSSLPFISLDKERIITSTEALNLKEIPKHlivigggv  184
             IK ++  + +  K  I+A GS P  L  +++D+ RII+STEAL+L+E+P+HL+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  iglelgsvYKRLGSEVTVVEYLDKIIPGMDGSLSKELQKVLKKQGMKFMLSTAVSAVERK  244
            IGLELG+ Y ++G+ VT++E  D I++G D  L+K +++ LK  G+  +  + V + E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDAVVVTAKDKKGAEVSVEGDYCLVSVGRRPYTEGLGLENAGVDLDERGRVKVNDHLQTN  304
            GD V V   +  G E  ++ DYCLVS+GR+P T  +GLEN GV LD++G +K+N+  QTN
Sbjct  279  GDEVNVHV-QVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  VSNIYAIGDVVKGAMLAHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGVGKTE  364
            + ++YAIGD   G +LAHKA  E+ + AE ++GQ++ I+++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKEEGVSYKVGSFPMRALGRSRASGDIDGLIKVLADEKTDEILGVHMIGARAADMIAE  424
             + KE G     + FP +A +R+ + +D DG+++V+A+ +T  +LGV+M+G+  + +IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVVAMEFRASAEDISRISHAHPTFTEAIKEAALDATGKRALHM  467
            AV A+E  A+AED+S   HAHPT+ E++ EAA +  G +A HM
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMG-HATHM  499

721) MY9_2424 in NC_017743


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (935),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 319/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARD  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEADGKSVLTSDEALQMEELPKSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEIDGETATYSAEKMLVSIGRQANIEGIGLENTDII-TENGVIS  303
             L +   +T+D+++++ ++DG       +  LVSIGR++N   IGLEN +++  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGMQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAVDGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +V G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

722) FCOL_01135 in NC_016510


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (935),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 182/452 (41%), Positives = 314/452 (70%), Gaps = 3/452 (0%)

Query  5    DVVVIGSGPGGYVSAIRCAQLGMKTAIIEKYGTLGGTCLNVGCIPSKALLASSHHYEELQ  64
            D++VIG+G+GGYV+AIR AQLG K  +++K + LGG CLN GCIPSKAL+++S++  +++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HFADHGIEVSGDVKINLQKMIERKQSVVDQTCGGVKFLMDKNNITVFQGVGSFENATTLN  124
            H    G+ VSG+V++++  ++ +K+++V++  +G++ L+  N + V+ G  ++   + + 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  ITKEDGSIEKIEAKNTIIATGSKPSSLPFIKIDKERIITSTEALKLPEVPKHliiigggv  184
              K ++  + +  K+ I+A GS P  L  + +D+ RII+STEAL+L EVP+HL+++GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  iglelgQVYLRLGAQVSVVEFMDRIIPGMDSALSKELTKVLKKQGMKFYTSHKVKEVSRN  244
            IGLELG  Y ++GA+V+++E  D I++G D+ L+K + + LK  G+   T   V+     
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GNEVVVKADNTKGQEIVLEGDYALVAVGRRPYTDGLNIDKAGVKLTERGQVEVNNHLQTS  304
            G+EV V  +   G+E +++ DY LV++GR+P T+ + +++ GV L ++G + +NN  QT+
Sbjct  279  GDEVNVHVQ-VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  TPNIYAIGDVIRGAMLAHKAEEEGVMVAEYLAGQKPHIDYNLIPGVVYTWPEVSAVGKTE  364
              ++YAIGD   G +LAHKA  E+ + AE ++GQ++ ID++ +P V+++ PEV+  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKAEGKNYKVGNFPFKALGRARASADTDGFIKILADSSTDEVLGIHIIGARAADLIAE  424
             + K  G +   + FPF+A +RA + +D+DGF++++A+ +T  VLG++++G+  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVTAMEFRASAEDISRMSHAHPTFAEAIKEAA  456
            AV A+E  A+AED+S   HAHPT++E++ EAA
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

723) PSE_0619 in NC_016642


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 195/465 (42%), Positives = 306/465 (66%), Gaps = 7/465 (1%)

Query  4    DLVVIGTGPGGYVCAIKAAQLGMKVAVVEKRKTHGGTCLNIGCIPSKALLHASEMFEEAS  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K    GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAEL-GGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HSFETLGIK-TSKPKVDWKAMQAHKDKVIDGNVTGIDYLFKKNKIDVHSGVGRVLGAGRV  122
            H+ +T+G+K ++  +VD   +   KD +++    GI  L+K N ++V SG + +  A   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EVKAEDGSTSIVETKNIVIATGSDVMPLPGIEIDEKTIVSSTGALSLEKVPNRMTVVGAG  182
             +K ED    I   K++++A GS  + L ++ +D+K I+SST AL L+ VPN++ VVG+G
Sbjct  159  KIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVYARLGAEVTVVEFMDKILGPMDADVSKQFMRMLKKQGLKFKLSSKVTAVQK  242
             IGLELG+ YA++GA VT++E  D IL+  D+ ++K   R LK  G+     + V + ++
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  243  KGRSLevtvepaageaaaetldadVVLVAIGRRPYTEGLGLAEAGVELDERGRVKTDNHY  302
             G  ++V V+  + E   +       LV+IGR+P T  +GL + GV LD++G +K +N  
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDY---CLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  KTNVDGIYAIGDVIAGPMLAHKAEDEGVAVAEMLSGQAGHVNYDVIPGVVYTSPEVASVG  362
            +TN++ +YAIGD  +G +LAHKA  E+   AE++SGQ + ++++ +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEELKAEGIKYKSGKFPFSANGRAKAMLHTDGFVKVLADAETDRVLGVHIVGFGAGEM  422
             TE E K  G    S++FPF AN+RA ++ ++DGFV+V+A+ +T RVLGV++VG   + +
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IHEACVLMEFGGSSEDLGRTCHAHPTMSEAVKEAAMATFAKPIHM  467
            I EA   +E G+++EDL+ T HAHPT++E++ EAA +  + + HM
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

724) A11Q_1817 in NC_020813


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (932),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 188/460 (41%), Positives = 311/460 (68%), Gaps = 4/460 (0%)

Query  2    GNVEENFDLVIIGAGPGGYTGAIRAAQLGLKTAVIEKDATYGGTCLNVGCIPSKALLQSS  61
            G+V    DL++IGAG+GGY +AIRAAQLG K  +++K A  GG CLN GCIPSKAL+ +S
Sbjct  34   GEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISAS  92

Query  62   EFYHEAQHDFSNHGIVIDSVKLDLAKMMARKNKIVGDLTNGIEFLFkknkitgikgtgki  121
            E   + +H  +    V + V++D++ ++ +K+ IV  LT+GI  L+K N +  I G +  
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY-  151

Query  122  LNANTIEVTDKDGGKKQIQTKNIMIATGSVPVELPFLKFDEKTILSSTGALALDYIPKEM  181
            L    I     ++  + +  K++++A GS+PVEL  + FD+K I+SST AL L+ +P+++
Sbjct  152  LTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  182  LVIGGGVIGLEMGSVWARLGSKVTVIEYSEQVCSMMDQDCITVLTRSLKKLGVNFITSAK  241
            +V+GGG IGLE+G+  A++G+KVT++E S+ + S  D      + R LK +G+  IT A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  242  VTASRSIGGRVELDYESLKDNSKSSIQGDVVLVSTGRKPFTDGLGLESVQVEKDERGRVK  301
            V ++ + G+ V+++ +   D     IQ D  LVS GRKP T+ +GLE++ V  D++G +K
Sbjct  272  VQGGENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  302  IDKNYRTATPNIYAVGDVTFGPMLAHKaeeegvavaeiiaTGHGHVNYNTVPSVIYTHPE  361
            I+++ +T   ++YA+GD + G +LAHKA  E+   AE+I+  ++ ++++++P VI+++PE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  362  VASVGMTEADAKKAGIEVNVGKFPFAANGRAKARGATDGFVKIVADKRTDRIIGGHIVGA  421
            VA  G+TE +AK  G E   ++FPF AN+RA + + +DGFV++VA+K T R++G ++VG+
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  422  GASELLGEIVVAMEFGGSSEDLARSFHSHPTMTEVIREAA  461
              S L++E V A+E G+++EDL+ ++H+HPT+ E + EAA
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

725) Coch_2179 in NC_013162


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (932),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 185/458 (41%), Positives = 313/458 (69%), Gaps = 5/458 (1%)

Query  1    MKTY-DIVIIGSGPGGYVAAIRAGQLGFKTALIEKYNTLGGTCLNVGCIPSKALLDSSHH  59
            +K Y D+++IG+G+GGYVAAIRA+QLG K  L++K   LGG CLN GCIPSKAL+ +S++
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YENASKHLEAHGIEITGKVKFSLEKMIARKAAVVEQTCAGVKFLMEKNKVDVFTGVGSFV  119
              +  KH ++ G+ ++G V+  +  ++ +K ++V++   G++ L+  N V+V++G  +++
Sbjct  95   VKHI-KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYL  152

Query  120  SPTQIKITPNKGKAETIEAKHTIIATGSKPASLPFIALDKERIITSTEALQLKEVPEHli  179
            + ++I      +  + +  K+ I+A GS P  L  +++D+ RII+STEALQL+EVP+HL+
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  180  vigggviglelgqvYSRLGAKVSVVEYTDSIIPTMDRGLGRELTKVLKKQGFAFYTGHQV  239
            V+GGG IGLELG  Y+++GAKV+++E +D+I++  D  L + + + LK  G++  T+  V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  240  KEVTRKGKTVTVKATTSKGEELTLKGDYCLVAVGRRPYTEGLNLEVVGVQKDERGRVIVN  299
            +     G  V V       EE+ ++ DYCLV++GR+P T  + LE +GV  D++G + +N
Sbjct  273  QGGENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  300  DHLQTNVPNIYAIGDVVRGAMLAHKAEEEGVLVVEQLAGQKPHIDYNLIPGVVYTWPEVA  359
            +  QTN+ ++YAIGD   G +LAHKA  E+ +  E ++GQ++ ID++ +P V+++ PEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  360  SVGKSEEQLKADSIAYKVGQFAFRALGRARASMDTDGFVKILADTQTDEVLGVHIIGARA  419
              G +E + K  +     ++F+F+A +RA +  D+DGFV+++A+ +T  VLGV+++G+  
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  420  ADMIAEAVTAMEFRASAEDIARICHAHPTFTEAIKEAA  457
            + +IAEAV A+E  A+AED++   HAHPT+ E++ EAA
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

726) lpdA2 in NC_018697


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 185/458 (41%), Positives = 312/458 (69%), Gaps = 10/458 (2%)

Query  21   AAIRCAQLGLKTACVDEFTDKNNKASLGGTCLNVGCIPSKALLESSHHYEQLNHGLDEHG  80
            AAIR AQLG K   VD       KA LGG CLN GCIPSKAL+ +S++  +++H+ +  G
Sbjct  54   AAIRAAQLGKKVVLVD-------KAELGGVCLNRGCIPSKALISASERVKHIKHA-NTMG  105

Query  81   IKVTG-LKIDVPTMIKNKDDIVSRLTGGISGLFKANKVTSFHGRGKLLAGKQVEITSNTD  139
            +KV+G +++D+P ++K KD+IV++LT+GI  L+K+N V  + G +  L+  ++      D
Sbjct  106  LKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHIAKIKIED  164

Query  140  DVSVISADSIILATGSRPIDIPSAPVDNINIVDSTGALNFDKTPKKLGVIGAGVIGLELG  199
            +  ++S   +ILA GS P+++ S P D+  I+ ST AL+++  P+ L V+G+G IGLELG
Sbjct  165  EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELG  224

Query  200  SVWNRLGSDVVLLEAQDEFLPAVDTKIAAEAKRQFKKQGLDIKMGARvtkattkakkvtv  259
            +   ++G+ V +LE+ D +L++ D  ++   KR++K  G+ +  +A V  +   +  V V
Sbjct  225  TAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNV  284

Query  260  NYEDASGEHTIELDKLIVSVGRRPNTDNLFAPESPIELDERGFIEVDEIWQTSQPCVYAI  319
            + +  + E+ I+ D  +VS+GR+PNT+++   +  + LD++GFI +++  QT+   VYAI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  320  GDLIRGPMLAHKASEEGVAVAEVIYGEEPEINYDVIPNVIYTGPEIAWVGQTEQHLKSAG  379
            GD   G +LAHKAS E+   AEVI G+++ I+++ +P VI+++PE+A  G TE++ K  G
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  380  IKVKIGTFPFAASGRAQALGDTTGMVKIISDEETDQILGVHIIGAQASELIAEAVLALEY  439
                 + FPF A++RA +++D+ G V+++++ +T ++LGV+++G++ S LIAEAV+A+E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  440  SASTEDLALTIHAHPTLSEALHEAALAVDKRALHIPNR  477
            +A++EDL+LTIHAHPTL+E+L EAA +V  +A H+ N+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

727) CYCME_1044 in NC_021917


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 185/458 (41%), Positives = 312/458 (69%), Gaps = 10/458 (2%)

Query  21   AAIRCAQLGLKTACVDEFTDKNNKASLGGTCLNVGCIPSKALLESSHHYEQLNHGLDEHG  80
            AAIR AQLG K   VD       KA LGG CLN GCIPSKAL+ +S++  +++H+ +  G
Sbjct  54   AAIRAAQLGKKVVLVD-------KAELGGVCLNRGCIPSKALISASERVKHIKHA-NTMG  105

Query  81   IKVTG-LKIDVPTMIKNKDDIVSRLTGGISGLFKANKVTSFHGRGKLLAGKQVEITSNTD  139
            +KV+G +++D+P ++K KD+IV++LT+GI  L+K+N V  + G +  L+  ++      D
Sbjct  106  LKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHIAKIKIED  164

Query  140  DVSVISADSIILATGSRPIDIPSAPVDNINIVDSTGALNFDKTPKKLGVIGAGVIGLELG  199
            +  ++S   +ILA GS P+++ S P D+  I+ ST AL+++  P+ L V+G+G IGLELG
Sbjct  165  EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELG  224

Query  200  SVWNRLGSDVVLLEAQDEFLPAVDTKIAAEAKRQFKKQGLDIKMGARvtkattkakkvtv  259
            +   ++G+ V +LE+ D +L++ D  ++   KR++K  G+ +  +A V  +   +  V V
Sbjct  225  TAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNV  284

Query  260  NYEDASGEHTIELDKLIVSVGRRPNTDNLFAPESPIELDERGFIEVDEIWQTSQPCVYAI  319
            + +  + E+ I+ D  +VS+GR+PNT+++   +  + LD++GFI +++  QT+   VYAI
Sbjct  285  HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAI  344

Query  320  GDLIRGPMLAHKASEEGVAVAEVIYGEEPEINYDVIPNVIYTGPEIAWVGQTEQHLKSAG  379
            GD   G +LAHKAS E+   AEVI G+++ I+++ +P VI+++PE+A  G TE++ K  G
Sbjct  345  GDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKG  404

Query  380  IKVKIGTFPFAASGRAQALGDTTGMVKIISDEETDQILGVHIIGAQASELIAEAVLALEY  439
                 + FPF A++RA +++D+ G V+++++ +T ++LGV+++G++ S LIAEAV+A+E 
Sbjct  405  YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEA  464

Query  440  SASTEDLALTIHAHPTLSEALHEAALAVDKRALHIPNR  477
            +A++EDL+LTIHAHPTL+E+L EAA +V  +A H+ N+
Sbjct  465  GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

728) Desor_4829 in NC_016584


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (932),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 181/449 (41%), Positives = 307/449 (69%), Gaps = 5/449 (1%)

Query  15   YVCALRAAQLGLSVLLVEGEKLGGTCLNRGCIPTKALVKSADLWREMGRAEEFGL-FAGE  73
            YV A+RAAQLG  V+LV+   LGG CLNRGCIP+KAL+ +++  +++ +A+  GL  +GE
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGE  111

Query  74   KRIDYSAVVARKDQVVNSLVNGVDKLMKAAKIHVVKGWGEFNKVGQLS-VATEGGEENYS  132
             ++D + VV +KD +VN L +G+  L+K+  ++V+ G   +   ++++ +  E+ E+ +S
Sbjct  112  VQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIAKIKIEDEEQIFS  170

Query  133  VENIILATGSVPARIPIPGSDLPGVVTSDEILEGTQLPKHLviigggvigLEFASIYEAF  192
              ++ILA GS+P  +     D   +++S E L+  ++P+HLV++GGG IGLE+++ Y  F
Sbjct  171  YKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKF  230

Query  193  GVKVSVVEMLPTLLPTIDEEIPKRLTPLLKRSRIDVYTKTAVKGIRKDGENLVVEIEDSK  252
            G KV+++E   T+L+  D  + K +   LK   I V T + V+G  + G+++ V+++   
Sbjct  231  GAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVDG  290

Query  253  GLKEIQADRVLLSTGRRPNLRGIDVNSLGLE-TERGAIKVNAQMQTNLPNVYAIGDVVGG  311
                IQ D  L+S GR+PN   I+++++G+   ++G IK+N + QTN+ +VYAIGD  GG
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  312  IMLAHVASEEGIVAVEHIAGRSVEMNYKAIPSAIFTHPEIATVGLTEQELKASGQEYHVS  371
             +LAH AS E+ +A E I+G++  ++++A+P  IF++PE+A  GLTE+E K  G E   S
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  372  KFPFSANGKALALGESVGLVKILADSEGI-VKGASIMGPQASTLISELVIAVEKGLRAED  430
            +FPF AN++AL+++++ G+V+++A+ +   V G  ++GP+ S+LI+E V+A+E G  AED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  431  IARTVHAHPTLPEAVMEAAHGIMGKPLHL  459
            ++ T+HAHPTLPE++MEAA+G+MG + H+
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

729) MROS_0857 in NC_018178


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (932),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 190/467 (41%), Positives = 309/467 (67%), Gaps = 4/467 (0%)

Query  6    QLAVIGAGPGGYAAAFLAADLGMEVTLIDMEKNPGGVCLYRGCIPSKALLHVAKLLNEAE  65
            +L VIGAG+GGY AA+ AA+LG  V L+D   + GGVCL RGCIPSKAL+  +  +++  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKA-ELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   EAKKWGIDF-GKPKIDIDKLREFKDGVVGKLTGGLGQLSKQRKVNYIQGRASFVNSTALL  124
            +A+  G+   G  ++D+  +   KDG+V KLT+G+  L K   V+ I G  +++  + + 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VEKTDGSTEEVVFEKAILATGSVPASVPAFSIGSDKVMDSTAALELKDVPKRLLVVGGGY  184
              K ++  +   +   ILA GS+P  + + +++  +++ ST AL+L++VP++L+VVGGGY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  IGLELSTVYASLGSKVTVVEMMPGILPGADRDMVAVLERRLKSRFENIYVNTKVVELKET  244
            IGLEL+T YA +G+KVT++E    IL+G+D  +   + R+LK     +  ++ V    +T
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  KKGIEVKLEGDKVDNPVQTFDKVLVSVGRKPVTKGLGLENTSVKINEKGFVSVDGTMKTD  304
               ++V ++ D  ++ +Q  D  LVS+GRKP T  +GLEN +V ++++GF+ ++   +T+
Sbjct  279  GDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  DDKIYAIGDIVGNPMLahkaaaegkvaveaIMGKRVAFEPNAIPAVVFTDPELAWAGITE  364
             + +YAIGD  G  +LAHKA+ E+K+A E I G+   ++ +A+P V+F+DPE+A +G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  TEAREKGIKYEVAKFPWGASGRATTLDRNDGMTKLIIEPETERiigvgivgvgAGDLIAE  424
             EA+EKG     ++FP  A++RA ++   DG  +++ E +T R++GV +VG   + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  GTLAIEMGANANDLELTIHPHPTLSETMMFAAELYYGRATDMYRPKR  471
            + +AIE GANA+DL LTIH+HPTL+E +M AAE   G+AT+M   K+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

730) Pfl01_5671 in NC_007492


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (932),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 189/468 (41%), Positives = 306/468 (66%), Gaps = 6/468 (1%)

Query  1    MSNY-DVVILGGGPGGYNAAIRAGQLGLKAACVEGRATLGGTCLNVGCMPSKALLHASEL  59
            + +Y D++++G+G+GGY AAIRA+QLG K   V+ +A LGG CLN GC+PSKAL+ ASE 
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASER  94

Query  60   YEAALGAEFANLGIEVKPTLNLAQMMKQKDESVSGLTKGIEFLFRKNKVDWIKGWGHIDG  119
                  A+   L +     +++++++K KD  V+ LT GI  L++ N V+ I G + +  
Sbjct  95   VKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  120  PGKVSVTGDQGSRIELTAKDIVIATGSEPTPLPGVEIDNKRILDSTGALSLSEVPKHLVV  179
            +    +  ++  +I ++ KD+++A GS P  L ++ +D+KRI+ ST AL L EVP+HLVV
Sbjct  155  AHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  180  IGAGVIGLELGSVWRRLGAQVTVVEYLDRICPGVDGEAGKTLQRSLSKQGISFKLSSKVT  239
            +G+G IGLELG+   ++GA+VT++E  D I +G D    KT++R L   GI+    + V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  240  SATSSANGVQLSVEPAAGGSAEILEADYVLVAIGRRPYTQGLGLENVGLSTDKRGMLANK  299
            ++ ++++ V++ V+   +G  EI++ DY LV+IGR+P T  +GLEN+G+  D +G +  +
Sbjct  274  GGENTGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  300  QH-RTEAPGVWVIGDVTSGPMLAHKAEDEAMACIEQIVGKAGEVNYDLIPNVIYTRPELA  358
            +  +T+   V  IGD ++G +LAHKA  EA    E I G+ + ++++ +P VI++ PE+A
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SVGKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVIADERTDEVLGVHLVGPSV  418
              G TE + K  G     ++FPF AN+RA    +++GF +V+A+  T  VLGV++VGP V
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  419  SEMIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVEGMATQM  466
            S +I+E   A+E +A+AED++LT H+HPT +E+L +AA  V G AT+M
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

731) Sinme_3101 in NC_015590


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 314/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLEALGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V+ + ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMivvg  182
            +  +  +EEQ++  K++++A GS    + ++  +FD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH  302
             ++GD  +V  +   +G    ++ +  L++ GRKP+T+ +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

732) SinmeB_2875 in NC_017322


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 314/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLEALGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V+ + ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMivvg  182
            +  +  +EEQ++  K++++A GS    + ++  +FD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH  302
             ++GD  +V  +   +G    ++ +  L++ GRKP+T+ +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

733) C770_GR4Chr3185 in NC_019845


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 314/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLEALGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V+ + ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMivvg  182
            +  +  +EEQ++  K++++A GS    + ++  +FD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH  302
             ++GD  +V  +   +G    ++ +  L++ GRKP+T+ +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

734) LPD2 in NC_018700


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 314/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLEALGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V+ + ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMivvg  182
            +  +  +EEQ++  K++++A GS    + ++  +FD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH  302
             ++GD  +V  +   +G    ++ +  L++ GRKP+T+ +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

735) lpdA2 in NC_017325


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 314/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQ  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLEALGVEVA-NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V+ + ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMivvg  182
            +  +  +EEQ++  K++++A GS    + ++  +FD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH  302
             ++GD  +V  +   +G    ++ +  L++ GRKP+T+ +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

736) B739_1540 in NC_018609


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (931),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 199/463 (43%), Positives = 314/463 (68%), Gaps = 4/463 (0%)

Query  5    DVTVIGSGPGGYVAAIRCAQLGFKTAIIEKYPTLGGTCLNVGCIPSKALLDSSEHFENAK  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +SE+  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFANHGIVINEPKADLARMVERKNEVVEQTTKGINFLMDKNKITVFEGVGSFETATKIK  124
            H  +    V  E + D++ +V +K+ +V++ T GI  L+  N + V+ G  ++ T + I 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VTKNDGSTESIESKYTIIATGSKPSSLPFISLDKERVITSTEALNLKEIPKHlvvigggv  184
              K ++  + +  K  I+A GS P  L  +++D+ R+I+STEAL+L+E+P+HLVV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  iglelgSVYKRLGSEVTVVEYLDKIIPGMDGSLSKELQKVLKKQGMKFMLSTAVSAVERK  244
            IGLELG+ Y ++G+ VT++E  D I++G D  L+K +++ LK  G+  +  + V + E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDTVVVTAKDKKGEEVNVEGDYCLVSVGRRPYTEGLGLENAGVDLDERGRVKVNDHLQTN  304
            GD V V  +    EE+ ++ DYCLVS+GR+P T  +GLEN GV LD++G +K+N+  QTN
Sbjct  279  GDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  VSNIYAIGDVVKGAMLAHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGVGKTE  364
            + ++YAIGD   G +LAHKA  E+ + AE ++GQ++ I+++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKEEGVSYKIGSFPMRALGRSRASGDIDGLIKVLADEKTDEILGVHMIGARAADMIAE  424
             + KE G     + FP +A +R+ + +D DG+++V+A+ +T  +LGV+M+G+  + +IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  AVVAMEFRASAEDISRISHAHPTFTEAIKEAALDATGKRALHM  467
            AV A+E  A+AED+S   HAHPT+ E++ EAA +  G +A HM
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMG-HATHM  499

737) NGTW08_0707 in NC_017511


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (929),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 195/464 (43%), Positives = 307/464 (67%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGAKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +A + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

738) lpdA3 in NC_017501


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (930),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 194/464 (42%), Positives = 307/464 (67%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDVAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D++ ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNSDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

739) lpdA3 in NC_017512


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (929),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 194/464 (42%), Positives = 307/464 (67%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PTKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGEGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G+ V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

740) lpd in NC_020156


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (930),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 192/459 (42%), Positives = 305/459 (67%), Gaps = 9/459 (1%)

Query  1    MSKY-DVAVIGSGPGGYVAAIRCAQLGMKTAIIEKYNTLGGTCLNVGCIPSKALLDSSHH  59
            + KY D+ VIG+G+GGYVAAIR AQLG K  +++K   LGG CLN GCIPSKAL+ +S++
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YDDAMKHFEEHGIEIPGEVKINFEKMIARKKQVVDTTCAGIDFLMKKNEVDVYTGMGSFV  119
              + +KH +  G+ ++GEV+++   ++ +K  +V+    GI  L+K N V+V +G  +++
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYL  152

Query  120  DATHI---KIDGEKtetieatntiiatGSKPGSLPFITLDKERVITSTEALSLKEIPKHM  176
              +HI   KI++E          +   GS P  L  + +D+ R+I+STEAL L+E+P+H+
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAI-GSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  177  ivigggvigLELGQVYKRLGAEVTVIEYMDRITPAMDKVLSKELMKVLKKQKVKFHLSHA  236
            +V+GGG IGLELG  Y ++GA VT++E  D I ++ D +L+K + + LK   +       
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  237  VNKVERNGDKVTVTAKNKKGEEVTFEGDYCLVSVGRRPYTDKLNATAAGVKINERGQVEV  296
            V+  E  GD V V  +    EE+ ++ DYCLVS+GR+P T+K+     GV ++++G + +
Sbjct  272  VQGGENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  297  NDHMQTNVPNIYAIGDVVRGIMLAHKAEEEGVFVAETIAGQKPHINYNLIPNVVYTWPEV  356
            N+  QTN+ ++YAIGD   G +LAHKA  E+ + AE I+GQ++ I+++ +P V+++ PEV
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  357  ASVGKTEEELKEAGIEYKAGSFPMRALGRSRASGDIDGLVKILADKSTDEVLGVHMIGAR  416
            A  G TE E KE G E  ++ FP +A +R+ + +D DG+V+++A+K+T  VLGV+M+G+ 
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  417  AADLIAEAVTAMEFRASAEDIARMSHAHPTYSEAVKEAA  455
             + LIAEAV A+E  A+AED++   HAHPT +E++ EAA
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

741) CC_0342 in NC_002696


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (931),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 300/462 (65%), Gaps = 5/462 (1%)

Query  14   DVVIIGGGPGGYNAAIRAGQLGLKVAIVEGRGKLGGTCLNVGCMPSKALLHASELYAAAT  73
            D+++IG+G+GGY AAIRA+QLG KV +V+ ++ LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  74   GPEFAKLGIEVKPKLNLSQMMAQKAESVEALTKGVEFLMKKNKVEYVKGWGRIDGVGKVV  133
             ++   L +    ++++++++  K   V+ LT G+  L+K N VE + G + +       
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  134  VKAEDGSETTLETKNIVIATGSEPTPLPGVSVDNKRIIDSTGALSLPEVPKRLVVVGAGV  193
            +K ED  E  +  K++++A GS P  L +++ D+KRII ST AL L EVP++LVVVG+G 
Sbjct  160  IKIED-EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  194  IGLELGSVWKRLGAEVTVVEYLDRILPGTDTEVANAFQKILVKQGFKFQLGAKVTGAEAG  253
            IGLELG+   ++GA VT++E  D IL+GTD  ++++ ++ L   G+    +A V G+E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  254  AKGVKLSFEPVAGGEAQTIEADYVLVAIGRRPYTQGLGLETVGVTPDKRGMI-ANDHFKT  312
            +  V++  +   +G  + I+ DY LV+IGR+P T  +GLE +GV  D +G I  N+  +T
Sbjct  279  GDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  313  GVAGVWVIGDVTSGPMLAHKAEDEGVACIEMIAGKAGHVNYGIIPGVVYTSPEVATVGKT  372
             +  V  IGD ++G +LAHKA  E+    E+I+G+ + +++  +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  373  EDELKAEGVAYKVGKFPFLANSRAKINHETDGFVKILADAKTDRILGAHMIGPNVGDMIA  432
            E E K  G     ++FPF AN+RA    ++DGFV+++A+ +T R+LG +M+GP+V+ +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  433  EYCVAMEFGGASEDVARTCHPHPTRSEALRQAAMGVEGWTMQ  474
            E   A+E G+ +ED++ T H+HPT +E+L +AA GV G + +
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

742) CCNA_00346 in NC_011916


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (931),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 300/462 (65%), Gaps = 5/462 (1%)

Query  14   DVVIIGGGPGGYNAAIRAGQLGLKVAIVEGRGKLGGTCLNVGCMPSKALLHASELYAAAT  73
            D+++IG+G+GGY AAIRA+QLG KV +V+ ++ LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  74   GPEFAKLGIEVKPKLNLSQMMAQKAESVEALTKGVEFLMKKNKVEYVKGWGRIDGVGKVV  133
             ++   L +    ++++++++  K   V+ LT G+  L+K N VE + G + +       
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  134  VKAEDGSETTLETKNIVIATGSEPTPLPGVSVDNKRIIDSTGALSLPEVPKRLVVVGAGV  193
            +K ED  E  +  K++++A GS P  L +++ D+KRII ST AL L EVP++LVVVG+G 
Sbjct  160  IKIED-EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  194  IGLELGSVWKRLGAEVTVVEYLDRILPGTDTEVANAFQKILVKQGFKFQLGAKVTGAEAG  253
            IGLELG+   ++GA VT++E  D IL+GTD  ++++ ++ L   G+    +A V G+E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  254  AKGVKLSFEPVAGGEAQTIEADYVLVAIGRRPYTQGLGLETVGVTPDKRGMI-ANDHFKT  312
            +  V++  +   +G  + I+ DY LV+IGR+P T  +GLE +GV  D +G I  N+  +T
Sbjct  279  GDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  313  GVAGVWVIGDVTSGPMLAHKAEDEGVACIEMIAGKAGHVNYGIIPGVVYTSPEVATVGKT  372
             +  V  IGD ++G +LAHKA  E+    E+I+G+ + +++  +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  373  EDELKAEGVAYKVGKFPFLANSRAKINHETDGFVKILADAKTDRILGAHMIGPNVGDMIA  432
            E E K  G     ++FPF AN+RA    ++DGFV+++A+ +T R+LG +M+GP+V+ +IA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  433  EYCVAMEFGGASEDVARTCHPHPTRSEALRQAAMGVEGWTMQ  474
            E   A+E G+ +ED++ T H+HPT +E+L +AA GV G + +
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

743) Ocepr_1753 in NC_014761


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (928),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 207/465 (45%), Positives = 327/465 (71%), Gaps = 9/465 (1%)

Query  3    DLIVIGTGPGGYHAAIRAAQLGLKvaaveagavggvCLNVGCIPtkallhaaetlehaak  62
            DL+VIG+G+GGY AAIRAAQLG KV  V+ + +GGVCLN GCIP+KAL+ A+E + H   
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  63   GAEFGL-VFSEAERDLAKMGRWRDKIVKKLTGGVASLLKGNGVELVKGFARFTGPR----  117
            +   GL V +E + D++ + +W+D IV+KLT+G+ +LLKGNGVE++ G A +T ++    
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  118  ELEVDGKKLEAKKIIVATGSKPAVLPGFEPDGEHVLTSTEMLRVENGVPARllvigggvi  177
             +E + + +  K +I+A GS P  L +   D  ++++STE L++++ VP +L+V+GGG I
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGYI  219

Query  178  glEFASIYARLGAEVTVVEYEGQILPGSDPELVKLLARSLKKQGIVVKTATKAAGYEKAG  237
            GLE+++ YA++GA VT++E  + IL+G+DP L K + R LK  GI V T +   G E++G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  238  GGLRVTVEPAAGGEQEVLDADKILLAVGRVPFTEGLNLEAAGVRTDERGFVPTNEHLETN  297
            + + V V+   +G +E+++ D  L+++GR P T  + LE  GV  D++GF+  N+  +TN
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  298  VPGVYAIGDVTKPPLLAHKAMKEGLVAAEHAAGRPAAFD-QQIPSVVYTQPEFASVGMTE  356
            +  VYAIGD +   LLAHKA  E+ +AAE  +G+ + +D Q +P V++++PE A  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  357  AEAKARGLEVRVGRFPFSASGRALTLQQTEGLIKLVADAENDLLLGAHILGPGASDLIae  416
             EAK +G E   +RFPF A++RAL++ +++G++++VA+ +   +LG +++GP  S LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  417  atlalemaataGDLALTVHPHPTLAENLMEAAENLHGRAIHILNR  461
            A +A+E +A A DL+LT+H+HPTL+E LMEAAE + G+A H+LN+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

744) dldH in NC_005027


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  249 bits (929),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 188/468 (41%), Positives = 314/468 (68%), Gaps = 12/468 (2%)

Query  7    ELVILGGGPAGYVAAIRAAQLGIDVACIDDNPRFGGTCVRVGCIPSKALLESSHLYEEAQ  66
            +L+++G+G++GYVAAIRAAQLG  V  + D++ +GG C+  GCIPSKAL+ +S+   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HKFADHGLNVS-NVEVDLDVMMKRKEKIVESLTGGIDMLFDRRGVTAYHGRGRLRDVDSI  125
            H     GL+VS +V+VD+  ++K+K+ IV+ LT+GI  L+   GV    G + L + +  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  126  EITPSEGAAEDQPTLVTADQIMLCPGSVPAQLPFVEEDGDRIGNSTTALSFPEVPEELVV  185
             I       ED+  + +  +++L  GS+P +L  +  D  RI +ST AL + EVP++LVV
Sbjct  159  KIK-----IEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  186  IGGGYIGLELGSVWNRLGSNVIVLEAFDRIMPGLDKEMATLAHRSFKKQGMDIRTGTFVA  245
            +GGGYIGLELG+   ++G++V +LE+ D I++G D  ++    R +K  G+ + T+++V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  246  SAKVDPKPGDKKPCVIKIK-NGETIRCDRVLLATGRAPATKSMGLEEAGVKLDERGFIQV  304
            ++    + GD     +++  + E I+CD  L++ GR P T  +GLE+ GV LD++GFI++
Sbjct  274  GGE---NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  305  NHQFETSVTGIYAIGDCIGGAMLAHKAMEEGIVCVEQMAGIASEMNYEVIPAIVFTHPEI  364
            N++ +T++  +YAIGDC GG +LAHKA  E+ +  E ++G  S ++++ +P ++F++PE+
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEV  390

Query  365  AMVGKTEEELKEAGIEYNKGVCPLGANGRARTLGDIDGRVKILADAATDRVLGVHIIGPR  424
            A  G TE E KE G E   +  P+ AN+RA +++D DG V+++A+  T RVLGV+++GP 
Sbjct  391  AYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPE  450

Query  425  agdmiaeaaaamefgaSSEDIARTCHAHPTLSEAVHEAALAIDDRAIH  472
             + +IAEA  A+E GA++ED++ T HAHPTL+E++ EAA ++ ++A H
Sbjct  451  VSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

745) RB2501_14314 in NC_013222


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (926),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 194/452 (43%), Positives = 305/452 (68%), Gaps = 13/452 (2%)

Query  1    MKSY-DVAIIGSGPGGYVAAIRCAQLGMKTALIEKYDTLGGTCLNVGCIPSKALLDSSHH  59
            +K Y D+ +IG+G+GGYVAAIR AQLG K  L++K   LGG CLN GCIPSKAL+ +S++
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YHDAITHFEKHGIDIPGDVKVNLKQMIARKQSVVEENTKGIEFLMDKNKVDVYHGLGSFK  119
              + I H +  G+ ++G+V+V++ +++ +K+++V+  T GI  L+  N V+V  G  ++ 
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYL  152

Query  120  DATHIEIAGKEKTEIEA-----KHSIIATGSKPASLPFIELDKERIITSTEALKLQEVPK  174
              +HI   +K K E E      K+ I+A GS P  L  + +D+ RII+STEAL+LQEVP+
Sbjct  153  TEAHI---AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPN  209

Query  175  HliiigggviglelgQVYNRLGAQVSVVEYMDRIIPGMDGALSRELTKVLKKQKVKFYLS  234
            HL+++GGG IGLELG  Y ++GA+V+++E  D I++G D  L++ + + LK   +     
Sbjct  210  HLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITD  269

Query  235  HKVTGVSRKGEKITVEAEDKKGKSVSLEGDYCLVSVGRKPYTDGLNAEAAGVKLNDRGQV  294
              V G    G+ + V+ +   GK   ++ DYCLVS+GRKP T+ +  E  GV L+D+G +
Sbjct  270  ALVQGGENTGDEVNVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  295  EVDEHLRTSAGNIYAIGDVVRGAMLAHKAEEEGVMVAEILAGQKPHIDYNLIPGVVYTWP  354
             +++  +T+  ++YAIGD   G +LAHKA  E+ + AE+++GQ++ ID++ +P V+++ P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  355  EVAAVGKTEEELKEAGVAYKSGQFPMRALGRSRASMDTDGFVKILADKETDEVLGVHMIG  414
            EVA  G TE E KE G    S++FP +A +R+ +  D+DGFV+++A+K+T  VLGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  415  ARVADLIAEAVVAMEYRASAEDIARMSHAHPT  446
            + V+ LIAEAV A+E  A+AED++   HAHPT
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPT  480

746) NGK_0885 in NC_011035


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (927),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 194/464 (42%), Positives = 307/464 (67%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDVAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D++ ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

747) acoD in NC_016603


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (927),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 306/466 (66%), Gaps = 12/466 (2%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGLKTAIVEEQHLGGICLNWGCIPTKALLAGAELATQFKH  66
            DL+VIGAG+GGYVAAIRAAQLG K  +V+  +LGG+CLN+GCIP+KAL++++E   ++KH
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  67   AGQFGFQVS-QLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFNGRAQLTAK--EKI  123
            A   G++VS +++ D+  +V+    +  +L +GI  LLK N V V++G A LT     KI
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  124  EVTDAQGKSQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSG  183
             + D +   Q +S  ++ILA G+ + ++  +P D   + S  EAL  +++P+ L+VVG+G
Sbjct  161  KIEDEE---QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  AIGSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQSIQI  243
             IG E+++ Y  +G +VT+++ +  IL+  D+ +++ V++++ + G+ V+TDA+VQ+ + 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  ENGQVHCVVETANHVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTN  303
              ++V+  V+     + +  D  L +IG +PNT  +GLE +GV L+ QGF+ I++ C+TN
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  304  VAGLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVASIGL  363
            +  +YAIGD AG+  LAHKAS EA I  E I+G  +V  ++   +P  IF++P+VA  GL
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQ--AMPFVIFSDPEVAYTGL  395

Query  364  TENVAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHI  423
            TE+ AK K      ++F++ AN++AL+++DA GFV+ V + +T  +LG +MVG EV+  I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  QG--FAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM  467
                FAI     A  E L+  I +HPTL+E++ E+  + M +A HM
Sbjct  456  AEAVFAIEA--GANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

748) bgla_1g18080 in NC_015381


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (927),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 185/462 (41%), Positives = 310/462 (68%), Gaps = 14/462 (3%)

Query  6    DVVVIGAGPGGYIAAVRAAQLGKTVACIEKWKNPAGALKLGGTCLNVGCIPSKALLASSE  65
            D++VIGAG+GGY+AA+RAAQLGK V  ++K         LGG CLN GCIPSKAL+++SE
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-------AELGGVCLNRGCIPSKALISASE  93

Query  66   EFEKTSHHLADHGITV-GDVKIDTAKMLARKDAIVEKMTGGIEYLFKKNKITWLKGHGKF  124
               K   H    G+ V G+V++D + ++ +KD+IV+K+T+GI  L+K N +  + G++ +
Sbjct  94   R-VKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  TGKTDAGVQIevsgegetevvtARNVIIATGSKARHLPNLPVDGKIVADNEGALTFETVP  184
            T    A ++IE   +  +     +++I+A GS + +L ++P D K +  +  AL ++ VP
Sbjct  153  TEAHIAKIKIEDEEQIFSY----KDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  KKLAVIGAGVIGLELGSVWRRLGAEVTVlealpaflaaadeavakeaaKLFKKQGLDINL  244
            + L V+G+G IGLELG+   ++GA VT+LE+  ++L+++D  ++K   + +K  G+ +  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  245  GVKIGEVKTSDAGVSIAYTDKDGAAKTLEADRLIVSIGRVPNTDNLGLESIGLKANERGF  304
            +  +     ++  V++   + DG    ++ D  +VSIGR PNT+++GLE+IG+  +++GF
Sbjct  269  DALVQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  305  IDVDDHCRTAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIDGQKPHIDYNCIPWVIYTS  364
            I +++ C+T + +VYAIGD   G +LAHKA  E+ + AEVI GQ++ ID++ +P VI++ 
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  365  PEIAWVGKTEQQLKAEGREIKAGKFPFSINGRALGMNAPEGFAKVIADAKTDEVLGVHII  424
            PE+A  G TE++ K  G E  +++FPF  N+RAL+++ ++GF +V+A+ +T  VLGV+++
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  425  SANASDLIAEAVVAMEFKAASEDIARICHAHPSLSEVLREAA  466
            +++ S LIAEAV A+E  A +ED++   HAHP+L+E L EAA
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

749) Hden_3225 in NC_014313


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (927),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 190/466 (41%), Positives = 299/466 (65%), Gaps = 10/466 (2%)

Query  6    DLIVIGTGPGGYVCAIRAAQLGLKVAVVEKRGTHGGTCLNVGCIPSKALLHASHAYDEAK  65
            DL+VIG+G+GGYV AIRAAQLG KV +V+K +  GG CLN GCIPSKAL+ AS+   + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HAFGAMGIDASP--VLDLPKMQAFKREGVKGNVEGVAYLLKKNKVQTYFGTGRIVKSGQV  123
            HA  +MG+  S    +D+P +   K   V+   +G+  LLK N V+  ++    +  +++
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEV-ISGEAYLTEAHI  157

Query  124  AVTSPGGETETLEAKSIVIATGSDVTRLPGIEIDEKRVVSSTGALELASVPRKLLVIGAG  183
            A     +E + +  K +++A GS    L ++ +D+KR++SST AL+L  VP  L+V+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGADVLVVEYLDRILPGIDKEVARAFQRLLDKQGIAFRLASKVTGVTG  243
             IGLELG+   ++GA V ++E  D IL+G D  ++++ +R L   GI+       + V G
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT---VITDALVQG  274

Query  244  PETPGKPLSVQIEPAAGGATETVEADVVLVAVGRVPYTDGLGLAEAGVALDAKKRILTDG  303
             E  G  ++V+++   +G  E ++ D  LV++GR P T+ +GL + GV LD +  I  + 
Sbjct  275  GENTGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  304  HFQTSASGIFAIGDVIAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPNVIYTSPEVAS  363
              QT+   ++AIGD  +G +LAHKA  E+   AE+I+GQ + ++++ +P VI++ PEVA 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  364  VGKSEEELKAAGIAYNVGKFPFTANGRAKSIRMTDGFVKILADAATDRVLGVHIIGANAG  423
             G +E E K  G     ++FPF AN+RA S+  +DGFV+++A+  T RVLGV+++G++ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  424  ELIAEACVLMEFGGSAEDLARTCHAHPTLSESVKEAALAVGKRAIH  469
             LIAEA   +E G++AEDL+ T HAHPTL+E++ EAA +V  +A H
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

750) lpdA3 in NC_013016


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (926),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 195/464 (43%), Positives = 306/464 (66%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLNI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+ +
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYQTAAGEAKTEVFDKLIVAIGRIPNTKGLNAEDVGLEKDER  303
              +  + +  + G  V+V  Q  + E   +  D  +V+IGR PNT  +  E++G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELLTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

751) Trad_0899 in NC_014221


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (926),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 197/461 (43%), Positives = 311/461 (68%), Gaps = 6/461 (1%)

Query  5    DLIVIGAGPGGYVAAIRAAQLGFDVACVEKEADLGGTCLRVGCIPSKALLESSEKFLETQ  64
            DL+VIGAG+GGYVAAIRAAQLG  V  V+K A+LGG CL  GCIPSKAL+ +SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   GALKEHGIEVA-EASLNLAAMHARKDKVVKSLTSGIAGLFKKNKVTRYEGAARFEGPNKL  123
             A +  G+ V+ E  ++++ +  +KD +V+ LT GI  L+K N V    G A +  ++  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  VVAGKNGEETLGAERIIIATGSKSVVLPGIELDGERVGTSTDALAYPEVPEHLVVIGAGY  183
             +   + E+ ++   +I+A GS +V L ++ +D  R+ +ST+AL   EVP+HLVV+G+GY
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  IGLELGSVWKRLGAKVTVVEYLDRILPGMDGEIAKEALKVFKKQGLEFRLGARVTSARAQ  243
            IGLELG+   ++GAKVT++E  D IL+G D  ++K   + +K  G+    +A V ++   
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  GEGAVV--EIDGQEPL-HAERVLVAVGRQPNTDGLNVEAIGLELDARGFIPVDAHYRTKI  300
            G+   V  ++DG+E + + +  LV++GR+PNT+ + +E IG+ LD +GFI ++   +T+I
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  301  PGIYAIGDVIGGAMLAHKAEEEGVACVEGIATGVGHVNYGAIPGVAYTEPEIASVGKTEE  360
              +YAIGD  GG +LAHKA  E+    E I+   + +++ A+P V +++PE+A  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  361  QLKEEGIKYKKGVFPFLANGRARALGHTEGKVKILADAETDRVLGVHIIGSRAGDLIAEA  420
            + KE G     + FPF AN+RA ++++++G V+++A+ +T RVLGV+++G+  + LIAEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  421  VAALEFGASAEDLARTSHAHPTlaealkeaalaVDGRALHI  461
            V A+E GA+AEDL+ T HAHPTL+E+L EAA +V G+A H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

752) Plim_3309 in NC_014148


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (926),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 190/465 (41%), Positives = 310/465 (67%), Gaps = 15/465 (3%)

Query  5    DLVVIGGGPGGYVAAIRAAQLGLNVACIEKESALGGTCLRVGCIPSKAMLESSELFQMAK  64
            DL+VIG+G+GGYVAAIRAAQLG +V  ++K + LGG CL  GCIPSKA++ +SE  +  K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   NHLAEHGVSINADSVKLDLPAMLKRKDGIVSQLTKGIDGLFRKNKIT-----RYLGHGKI  119
             H    G+ ++++ V++D+P ++K+KDGIV++LT GI  L++ N +       YL ++ I
Sbjct  100  -HANTMGLKVSGE-VQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  120  VAPGKVLVEGAQPEEIVCKNIVIATGSKSAPLKGVEVDNERIGTSTEALAFPEVPGTMVV  179
               +K+ +E+ + + +  K++++A GS +  LK++  D+ RI +STEAL + EVP  +VV
Sbjct  158  ---AKIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  180  IGAGVIGLELGCVWSRLGAKVIVLEYLDRILPGMDSEIATEAQKIFTKQGIEFRLGMKVT  239
            +G+G IGLELG   +++GAKV +LE  D IL+G D+ ++   ++ +   GI    +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  240  GAKVSGK--KCVVTCEGAEPITA-DRVLLAVGRIPNTENLNLDGVHVAYDNRGRIQVDQH  296
            G+  +G   +  V  +G E I   D  L+++GR PNT ++ L+ + V  D++G I++++ 
Sbjct  274  GGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  297  FQTTIPGIYAIGDVIGGAMLAHKAEEEGMAVAEGIVWGHCHVNYDAIPAIVYTHPEIASV  356
             QT I  +YAIGD  GG +LAHKA  E+   AE I   +  ++++A+P +++++PE+A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  357  GKTEDQLKEAGVPYKKGSFPYMANGRAKAIAANEGRAKVLAHAETDRVLGVHIIGAHAGD  416
            G TE + KE G     + FP+ AN+RA +++  +G  +V+A+ +T RVLGV+++G++ + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  417  LIAEAALAIEFGASSEDIARTSHAHPTLAEIVKEAALAVDGRAIH  461
            LIAEA +AIE GA++ED++ T HAHPTL+E + EAA +V G+A H
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

753) B479_18925 in NC_019905


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  248 bits (926),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 174/425 (41%), Positives = 281/425 (67%), Gaps = 13/425 (3%)

Query  16   PGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQTSRFAGPSELG  75
            +GGYVAAIRA+QLG   VLV+   LGG CLN GCIPSKALI  +E+  +  +   ++ +G
Sbjct  49   SGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH---ANTMG  105

Query  76   ISVASP-RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVIHGWAKVLDGK----QVEVD  130
            + V++  ++D+ + V WKDGIV++LT G+ +LLK +GV VI G A + ++     ++E +
Sbjct  106  LKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDE  165

Query  131  GQRIQCEHLLLATGSSSIELPMLPLGG-PIISSTEALAPKTLPQHLVVVGGGYIGLELGI  189
             Q +   +L+LA GS ++EL  +P++   IISSTEAL  + +P+HLVVVGGGYIGLELG 
Sbjct  166  EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGT  225

Query  190  AYRKLGARVSVVEARERILPTYDSELTAPVAESLKKLGITL---HLGHSVEGYEGGCLLA  246
            AY K+GA+V+++E+ + IL+  D+ LT  V   LK +GIT+    L ++ E   +   + 
Sbjct  226  AYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVH  285

Query  247  RDGQGGQLRLEADQVLVAVGRRPRTQGFNLECLDLKMNGAA-VAIDERCQTSMRNVWAIG  305
             + +G +  ++ D  LV++GR+P T  + LE +++ +++ + + I+++CQT++ +V AIG
Sbjct  286  VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIG  345

Query  306  DVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPSAIAAVCFTDPEVVVVGKTPEQASQQGL  365
            D AG  +LAH+A  ++ + AE+I+G+   ++  A++ V F+DPEV   G T  +A ++G 
Sbjct  346  DCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGY  405

Query  366  DCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMG  425
            + + ++FPF AN+RA+S+    GFV+VVA ++   +LG Q VG  VS L +    ++E G
Sbjct  406  ETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAG  465

Query  426  ACLED  430
            A  ED
Sbjct  466  ANAED  470

754) TTC1753 in NC_005835


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (923),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 217/470 (47%), Positives = 327/470 (70%), Gaps = 12/470 (2%)

Query  1    MKTY-DLIVIGTGPGGYHAAIRAAQLGLKVLAVEASEVGGVCLNVGCIPTKallhaaetl  59
            +K Y DL+VIG+G+GGY AAIRAAQLG KV+ V+ +E+GGVCLN GCIP+KAL+ A+E +
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  60   hhlKVAEGFGLKAKPEL--DLRKLGGWRDQvvkkltggvgtllkgNGVELLRGFARLVGP  117
             H+K A+  GLK   E+  D+  +  W+D +V+KLT+G+ TLLKGNGVE++ G A L  +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  118  K----EVEVGGERYGAKSLILATGSEPLELKGFPFGED-VWDSTRALKVEEGLPKRLLVI  172
                  +E   + ++ K LILA GS P+ELK+ PF++  +  ST AL+++E +P++L+V+
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVV  214

Query  173  GGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVG  232
            GGG +GLELG  Y ++GA VT++E    IL+  DP  +  ++R L   GI V T +   G
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  233  YEKKKDGLHVRLEPAeggegeevvvdkvlvavgRKPRTEGLGLEKAGVKVDERGFIRVNA  292
             E+  D ++V+++     E  +     V ++  RKP T  +GLE+ GV +D++GFI++N 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIG--RKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  293  RMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPEWAG  351
            + +T++  VYAIGD A   LLAHKA  E+ IAAE  +G++S +D+Q +P V+++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  352  VGLTEEEAKRAGYRVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQag  411
             GLTE EAK  GY    ++FP+ A++RAL++++A+G V+VV++ +T  +LGV +VGP+ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  412  eliaeaalalemgaTLTDLALTIHPHPTLSESLMEAAEAFHKQAIHILNR  461
             LIAEA +A+E GA   DL+LTIH+HPTL+E+LMEAAE+   +A H+LN+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

755) Weevi_1659 in NC_015144


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (923),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 189/444 (43%), Positives = 305/444 (69%), Gaps = 4/444 (0%)

Query  5    DIAVIGAGPGGYVAAIRAAQLGFRTAIIEKESLGGTCLNVGCIPSKALLDSSHHFYDAKT  64
            D+ VIGAG+GGYVAAIRAAQLG +  +++K  LGG CLN GCIPSKAL+ +S++  + K 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK-  99

Query  65   HFKEHGIDINAP-KINMKQMIARKADVVNVNVSGIKYLMDKNKIDVYYGTGTFKDATHIT  123
            H +  G+ +++  +++M +++ +K ++VN    GI+ L+  N ++V  G  ++   +HI+
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  124  VTDAEGKTQEIEAKNTIIATGSVPSELPFAKTDGKRIITSTEALELTTVPKHlivigggv  183
                E+  Q +  K+ I+A GS+P EL     D KRII+STEAL+L  VP+HL+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  iglelgsvYLRLGAEVSVVEYADRIIPGMDSALSKELTKVLKKQGMKFYTSTKVTSVEAQ  243
            IGLELG+ Y ++GA V+++E +D I++G D+ L+K + + LK  G+   T + V + E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  GTKVTLKAEDKKEQEVVLEGDFALVAVGRRAYTGSLGLENVGVEVDERGRVKTNQHLQTN  303
            G  V +  +    +E++ + D+ LV++GR++ TG +GLEN+GV +D++G +K N+  QTN
Sbjct  279  GDEVNVHVQVDGKEEII-QCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  304  IPNIYAIGDVVAGAMLAHKAEEEGVLVVEQLAGQKPHINYNLIPGVVYTWPEVAGVGKTE  363
            I ++YAIGD  +G +LAHKA  E+ +  E ++GQ++ I+++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  364  EQLKEEGVEYKVGSFPFKALGRARASMDTDGFAKILADKNTDEILGMHIIGARAADLIAE  423
             + KE G E   + FPF+A +RA +  D+DGF +++A+KNT  +LG++++G+  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  424  AVVAMEYRASAEDIARMSHAHPTF  447
            AV A+E  A+AED++   HAHPT+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTL  481

756) lpdA-1 in NC_010842


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (923),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 187/454 (42%), Positives = 312/454 (69%), Gaps = 6/454 (1%)

Query  5    DIIVIGAGPGGYVAAVRAAQLGKKVAIIEKRKTLGGTCLNVGCIPSKALLDSSEEFHKTK  64
            D++VIGAG+GGYVAA+RAAQLGKKV +++K   LGG CLN GCIPSKAL+ +SE     K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HKLADHGISVK-DVKIDIAKMMARKDKVVSEVTSGVDYLMKKNKITRYLGQASFVSKTEV  123
            H     G+ V  +V++D++ ++ +KD +V+ +T G+  L+K N +    G+A +++ +++
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  SITADDGKKESISGTNIIIATGSTPIEIPPLPVDGKNIVTSDHAIGFDSVPEHLIIVGAG  183
            +    ++  + +S  ++I+A GS P+E+ ++P D K I++S +A+ ++ VP+HL++VG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWLRLGAKVTVVELMPRLFGTADQAMASLAERLLTQQGINFLFETkvhgakv  243
             IGLELG+   ++GAKVT++E    +++ +D  ++    R L + GI  ++   +  +  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT-VITDALVQGGE  276

Query  244  kgkkveveiegkdgkkSVLEGDKVLVSIGRRPNTDGLGAKEIGIEMTDRGRVKVEPNKFQ  303
            +           DGK  +++ D  LVSIGR+PNT+ +G  +IG+ + D+G +K++ NK Q
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN-NKCQ  335

Query  304  TNIPNIYAIGDVVDGPMLAHKAEDEGIAVAELICGKYGHVNYKAIPWIVYTWPEVAWVGL  363
            TNI ++YAIGD  +G +LAHKA  E+   AE+I G+ + ++++A+P ++++ PEVA  GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  GEEELKAKGIEYKVGKYMFKPNARAKAMNETDGQVKVLADKKTDKLLGVYIVGPRASDMi  423
             E E K KG E   +++ F++NARA +++++DG V+V+A+K+T ++LGV +VGP  S +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  aeaaiafefgasaeDIARSTHAHPTLSEVLREAA  457
            AEA +A+E GA+AED++ + HAHPTL+E L EAA
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

757) lpdA1 in NC_010602


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (923),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 187/454 (42%), Positives = 312/454 (69%), Gaps = 6/454 (1%)

Query  5    DIIVIGAGPGGYVAAVRAAQLGKKVAIIEKRKTLGGTCLNVGCIPSKALLDSSEEFHKTK  64
            D++VIGAG+GGYVAA+RAAQLGKKV +++K   LGG CLN GCIPSKAL+ +SE     K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HKLADHGISVK-DVKIDIAKMMARKDKVVSEVTSGVDYLMKKNKITRYLGQASFVSKTEV  123
            H     G+ V  +V++D++ ++ +KD +V+ +T G+  L+K N +    G+A +++ +++
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  124  SITADDGKKESISGTNIIIATGSTPIEIPPLPVDGKNIVTSDHAIGFDSVPEHLIIVGAG  183
            +    ++  + +S  ++I+A GS P+E+ ++P D K I++S +A+ ++ VP+HL++VG+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWLRLGAKVTVVELMPRLFGTADQAMASLAERLLTQQGINFLFETkvhgakv  243
             IGLELG+   ++GAKVT++E    +++ +D  ++    R L + GI  ++   +  +  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT-VITDALVQGGE  276

Query  244  kgkkveveiegkdgkkSVLEGDKVLVSIGRRPNTDGLGAKEIGIEMTDRGRVKVEPNKFQ  303
            +           DGK  +++ D  LVSIGR+PNT+ +G  +IG+ + D+G +K++ NK Q
Sbjct  277  NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN-NKCQ  335

Query  304  TNIPNIYAIGDVVDGPMLAHKAEDEGIAVAELICGKYGHVNYKAIPWIVYTWPEVAWVGL  363
            TNI ++YAIGD  +G +LAHKA  E+   AE+I G+ + ++++A+P ++++ PEVA  GL
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  GEEELKAKGIEYKVGKYMFKPNARAKAMNETDGQVKVLADKKTDKLLGVYIVGPRASDMi  423
             E E K KG E   +++ F++NARA +++++DG V+V+A+K+T ++LGV +VGP  S +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  aeaaiafefgasaeDIARSTHAHPTLSEVLREAA  457
            AEA +A+E GA+AED++ + HAHPTL+E L EAA
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

758) lpdA3 in NC_010120


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (923),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 193/464 (42%), Positives = 306/464 (66%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGSEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + G+ VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

759) NMBB_1673 in NC_017505


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (921),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 194/464 (42%), Positives = 306/464 (66%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGGCRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

760) lpd in NC_018000


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (922),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 192/466 (42%), Positives = 310/466 (67%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHHAA  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   H  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLDALGVEVASP-KLNLQKMLAHKDATVKANVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V++  ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNDKGEEQVLEARNVVIATGSDVAGIPGVELEFDEKVIISSTGALELEKVPASMivvg  182
            +  +  +EEQ++  +++++A GS    + +  + FD+K IISST AL+L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKS--MPFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEFLDTILGGMDGEIAKQLQRMLAKQGIDIKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI +  +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSENAARVTFEPVKGGEATTLDAEVVLVATGRKPCTEGMGLAKAGVVLDARGRVEIDRH  302
             ++ +   V  +   +G    ++ +  LV+ GRKP T  +GL + GVVLD +G + I+  
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKVGKFPFTANGRARAMLQADGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ +ADGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

761) Bsel_2254 in NC_014219


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (922),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 191/470 (41%), Positives = 310/470 (66%), Gaps = 14/470 (2%)

Query  6    DLVIVGAGTGGYVAAIRASQLGLKTAIVERGKLGGTCLHEGCIPSKALLRSAEVYHTIRH  65
            DL+++GAG+GGYVAAIRA+QLG K  +V+++ LGG CL+ GCIPSKAL+ ++E    I+H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   AGGFGVDVS-EYSLNFPAVQDRKEKIVDQLHKGVQHLIKKGKIDVYEGYGRIMGPSIFSP  124
            A   G+ VS E  ++ P V  +K+ IV++L  G++ L+K   ++V  G      + +  +
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-----EAYLTEA  155

Query  125  RAGTISVEHDGEEENTMLVPKFVMIATGSRAKTLPGLPVDEDRIMTSTGALVLSEVPESi  184
            + + I +E    +E+ ++  K +++A GS +  L ++P D+ RI++ST AL L EVP+ +
Sbjct  156  HIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  tivgggvigiEWASMLADFGSKVTVLEYLDRILPGEDADISKEMLRAMKKKGVKVHTGAK  244
             +VGGG IG+E ++  A FG+KVT+LE  D IL+G D+ ++K + R +K  G+ V T+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  245  VNGADTKIETNGVTLSYEHKGKTVTIESERVLVSVGREANTGDLGLGNTEI-QTDHGFIQ  303
            V+G++     + V +  +  GK   I+ +  LVS+GR +NTG +GL N  +   D+GFI+
Sbjct  272  VQGGENT--GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNEHYQTAEEHIYAIGDVIGGLQLAHVASHEGIHAVEHMAELSPEPMQESLIPKCTYSAP  363
            +N+  QT  EH+YAIGD  GG  LAH AS E+  A E ++  ++  ++   +P   +S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EVASVGLTEEEAKNQGYQVKTGKFSFKAIGKALVFGDTSGFVKFVTDENNDDLLGVHMIG  423
            EVA  GLTE EAK++GY+  +++F+F+A ++AL  +D+ GFV+ V++ N   +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTELISEAALARVLDAAHWEVASTIHPHPSLSEIMGEAALAVDGNEIH  473
            P+V+ LI+EA +A   +A   +++ TIH+HP+L+E + EAA +V G+  H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

762) I33_2484 in NC_017195


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (923),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 190/470 (41%), Positives = 318/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEADGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAVDGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +V G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

763) A11S_578 in NC_020812


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (924),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 198/463 (43%), Positives = 323/463 (70%), Gaps = 9/463 (1%)

Query  8    DVIVIGSGPGGYVCAIRCAQLGLKTACVEKRDTLGGTCLNVGCIPSKALLQASEKFHEAE  67
            D++VIG+G+GGYV AIR AQLG K   V+K + LGG CLN GCIPSKAL+ ASE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   HALAAFGVKV-GKPELDLPTMMKHKDAVVESNTKGVEFLFKKNKIDWLKGEGKVAAPGV-  125
            HA  + G+KV G  ++D+P ++K KD++V+  T G+  L+K N ++ + GE+ ++ + + 
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  126  ---VEVAGKTYNAKNIVIATGSDVASLPGITIDEKRIVSSTGAIALESVPKHlvvigggv  182
               +E   + ++ K++++A GS    L ++ +D+KRI+SST A+ L+ VP+HLVV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  183  iglelgAVWGRLGAKVTVVEYLDRILPTMDADLSKEAKKIFGKQGMEFKLESKVTSVKDN  242
            IGLELG+  +++GAKVT++E  D IL+  D+ L+K  K+ +   G+    ++ V +  + 
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  243  GKGVTLSVEPAKGGAAETIEADIVLVAVGRKAYTDGLGLDSVGVERDERGRIKTDAHFQS  302
            G  V + V+   +G  E I+ D  LV++GRK+ T+ +GL+++GV  D++G IK +   Q+
Sbjct  279  GDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  303  NVKGIFAIGDVIAGPMLAHKAEDEGVILAEMIAGQTGHIDYNLVPSVVYTWPEVASVGQT  362
            N+  ++AIGD  +G +LAHKA  E+ I AE+I+GQ + ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  363  EDQVKAANAQYKVGKFPFSANGRARAMNATEGFVKIIADAKSDRVLGVHIIGPEAGTLIA  422
            E + K    +   ++FPF AN+RA +++ ++GFV+++A+ ++ RVLGV+++GPE ++LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  423  EAVIAMEFGASSEDIARTCHAHPTleeavkeaalavDGRPLHM  465
            EAV+A+E GA++ED++ T HAHPTL E++ EAA +V G++ HM
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

764) NGO0915 in NC_002946


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (924),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 194/464 (42%), Positives = 306/464 (66%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

765) NMBM04240196_1205 in NC_017515


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (924),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 194/464 (42%), Positives = 306/464 (66%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

766) lpd in NC_021499


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  247 bits (924),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 187/465 (41%), Positives = 308/465 (67%), Gaps = 11/465 (2%)

Query  5    DVVVIGGGPGGYNAAIKAGQQGMKVACIEGRETLGGTCLNVGCMPSKALLHASELYEAAA  64
            D++VIG+G+GGY AAI+A+Q G KV  ++ +  LGG CLN GC+PSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASE--RVKH  97

Query  65   GKEFATLGIQV--EPKLDLAQMMKQKADSVAALTKGIEFLFRKNKVEWVKGWGRIAGAGK  122
             K+  T+G++V  E ++D+++++K K + V  LT GI  L++ N VE + G + ++ A  
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA-H  156

Query  123  VVVTAADGSEQTLEARNIVIATGSEPTPLPGVTIDNKRILDSTGALSLPEVPKHLVVIGA  182
            +     ++ EQ +  +++++A GS P  L ++ +D+KRI+ ST AL L EVP+HLVV+G+
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  183  GVIGLELGSVWRRLGAQVTVVEYLGRICPGLDDEAGKTLQRSLTKQGMSFKLSSKVTGAK  242
            G IGLELG+   ++GA+VT++E  + I +G D    KT++R L   G++    + V G+ 
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG-  275

Query  243  TSKTGVELSIEPAAGGLAETVKADYVLVAIGRRPYTAGLGLETVGLATDSRGML-ANDRH  301
              +TG E++++   +G  E ++ DY LV+IGR+P T+ +GLE +G+  D +G +  N++ 
Sbjct  276  -ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  302  QASAAGIWVIGDVTSGAMLAHKAEDEGIVCIERIAGQAAEVNYNLIPSVIYTRPEVATVG  361
            Q++   +  IGD ++G +LAHKA  E+ +  E I+GQ + ++++ +P VI++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  362  KSEEQLKAEGRPYKVGKFPFTANSRAKINHETEGFVKVLADERTDEILGVHMVGPSVSEM  421
             +E + K  G     ++FPF AN+RA    +++GFV+V+A+  T  +LGV+MVGP VS +
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  422  IGEYCVAMEFSASAEDIALTCHPHPTRSEALRQAAMDV--HDAAM  464
            I+E   A+E +A+AED++LT H+HPT +E+L +AA +V  H + M
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

767) lpdV in NC_000964


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (920),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 317/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEVDGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAADGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +  G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

768) lpdV in NC_020507


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (920),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 317/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEVDGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAADGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +  G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

769) lpdV in NC_018520


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (920),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 317/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEVDGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAADGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +  G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

770) Ccan_08480 in NC_015846


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (920),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 187/458 (41%), Positives = 310/458 (68%), Gaps = 5/458 (1%)

Query  1    MKTY-DVVVIGSGPGGYVAAIRAAQLGFKTAIIEKYATLGGTCLNVGCIPSKALLDSSHH  59
            +K Y D++VIG+G+GGYVAAIRAAQLG K  +++K A LGG CLN GCIPSKAL+ +S++
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YEDALKHFESHGIEISGEIKMNLEKMIARKQSVVEQTSAGVKFLMDKNKIDVYQGLGSFA  119
              + +KH ++ G+ +SGE+++++  ++ +K+++V++ + G++ L+  N ++V  G  ++ 
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYL  152

Query  120  DTTHVKITMNDGSSQQIEAKKIIIATGSKPASLPFITIDKERIITSTEALKMNEVPKHli  179
              +H+     ++  Q +  K +I+A GS P  L  + +D+ RII+STEAL+++EVP+HL+
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  180  vigggviglelgqvYRRLGAEVSVVEYMEGILPTMDTSLGKELTKILKKQGFKFYTSHKV  239
            V+GGG IGLELG  Y ++GA V+++E  + IL+  D  L K + + LK  G+   T   V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  240  KEVSRKGEKVIVKADNKKGEEIALEGDYVLVAVGRRPYTEGLNLQAAGVKTDERGRVVVN  299
            +     G+ V V  +    EEI ++ DY LV++GR+P T  + L+  GV  D++G + +N
Sbjct  273  QGGENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  300  DHLQTNVPNIYAIGDVVRGAMLAHKAEEEGVLVAEYLAGQKPHMDYNLIPGVVYTWPEVA  359
            +  QTN+ ++YAIGD   G +LAHKA  E+ + AE ++GQ++ +D++ +P V+++ PEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  360  SVGKTEEQLKAEGIRYKTGQFPMRALGRARASMDTDGFVKVLADPTTDEILGVHIIGARA  419
              G TE + K  G    +++FP +A +RA +  D+DGFV+V+A+  T  +LGV+++G+  
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  420  ADMIAEAVTAMEFKASAEDIARISHAHPTFTEAIKEAA  457
            + +IAEAV A+E  A+AED++   HAHPT+ E++ EAA
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

771) Fleli_3779 in NC_018018


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (919),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 187/459 (41%), Positives = 309/459 (68%), Gaps = 13/459 (2%)

Query  2    KY-DVTIIGSGPGGYVAAIRAAQLGLKTAIIEKYATLGGTCLNVGCIPSKALLDSSEHF-  59
            KY D+ +IG+G+GGYVAAIRAAQLG K  +++K A LGG CLN GCIPSKAL+ +SE+  
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVK  96

Query  60   ---HAAQKDFKEHGININEPEVNFEQMINRKRDVVSKTCDGVSYLMKKNKIDVYQGVGSF  116
               HA   ++K  G    E +V+  +++++K ++V+K  DG+  L+K N ++V  G + +
Sbjct  97   HIKHANTMGLKVSG----EVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  117  IDKNNIKITPEEGEEVKIETDKVIIATGSKPTIFPFFPYDKKRFITSTEALELKEVPKKM  176
             + +  KI  E+ E++ +    +I+A GS P  +   P+D+KR+I+STEAL+L+EVP+ +
Sbjct  153  TEAHIAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  177  ivigggvigMELGSVYARLGTEVSVIEFMPSIIAGMDRTMGKELERVSKKSLKMKFFLQH  236
            +V+GGG IG+ELG+ YA++G+ V+++E   +I++G D  + K + R   K + +  + + 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKR-HLKEIGITVITDA  270

Query  237  KVEEAKLDGEEVVIKAIDKKGKEVEFRADYCLLSVGRHAYTEGLGLENIGIKTDKRGTIE  296
             V+ +   G+EV +  ++  GKE  ++ DYCL+S+GR + T  +GLENIG+  D +G I 
Sbjct  271  LVQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  297  VNDQLETAVKGVYAIGDVVRGAMLAHKAEEEGTMVAEIMAGQKPHINYNLIPGVVYTWPE  356
            +N++ +T +  VYAIGD   G +LAHKA  E+ + AE+++GQ++ I+++ +P V+++ PE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  357  VASVGYTEEQLKESGRKYKVGSFPFMALGRARASMDTDGLVKVLADEKTDEILGMHIIGA  416
            VA  G TE + KE G     + FPF A +RA +  D+DG+V+V+A+ +T  +LG++++G+
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  417  RAADMIATGVTAMEFRASAEDLARQSHAHPTYMEAVKEA  455
              + +IA +V A+E  A+AEDL+   HAHPT  E++ EA
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

772) MED152_09985 in NC_020830


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 189/458 (42%), Positives = 313/458 (69%), Gaps = 6/458 (1%)

Query  2    KY-DIIVIGSGPGGYISAIRASQLGKKVAIIEKYSTLGGTCLNVGCIPSKALLDSSHHFY  60
            KY D++VIG+G+GGY++AIRA+QLGKKV +++K + LGG CLN GCIPSKAL+ +S++  
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERV-  95

Query  61   DAVHHFEEHGISVE-KPSFDFSKMIDRKAKVVETTTGGIKYLMDKNNIDVYEGLGSFEDA  119
              + H +  G+ V      D + ++ +K  +V+  T+GI+ L+  N ++V  G  ++   
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTE  154

Query  120  THVKVSKNDGSSEVIEGTNIIIATGSKPSTLPFITVDKDRIITSTEALKLKEVPKHllvi  179
            +H+   K ++  +++   ++I+A GS P  L  +  D+ RII+STEAL+L+EVP+HL+V+
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  180  gggviglelgSVYKRLGADVTVIEYAPKITPTMDADVSKELQKVLKKQGMKFNVSTGVTS  239
            GGG IGLELG+ Y ++GA VT++E +  I +  D+ ++K +++ LK  G+     + V +
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  240  VERNGDEIIVKANNKKGEEVTFTGDYCLVAVGRKAYTEGLGLEKAGVKVNERGQVEVNDH  299
             E  GDE+ V  +    EE+ +  DYCLV++GRK+ T  +GLE+ GV ++++G + +N+ 
Sbjct  275  GENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  300  LQTNISNIYAIGDVVKGAMLAHKAEEEGVVVAEYLAGEKPHIDYNLIPGIVYTWPEVAAV  359
             QTNI ++YAIGD   G +LAHKA  E+ + AE ++G+++ ID++ +P ++++ PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  360  GKTEQELKDAKIEYKSGKFSMRALGRSRASGDLDGFVKVLADKKTDEVLGVHMVGARVAD  419
            G TE+E K+   E  S++F+ +A +R+ + +D DGFV+V+A+K+T  VLGV+MVG+ V+ 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  420  LIMETAVAMEYRASAEDLARICHGHPTYSEAVKEAAKA  457
            LI E+  A+E  A+AEDL+   H+HPT +E++ EAA +
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEG  491

773) lpdV in NC_017196


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (918),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 317/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEADGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEIGQTIHPHPTLSEAIGEAALAADGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +  G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

774) lpdV in NC_020244


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 317/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEADGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAADGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +  G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

775) lpdA-1 in NC_007517


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 195/476 (41%), Positives = 313/476 (66%), Gaps = 24/476 (5%)

Query  7    DLIVIGAGPGGYVAAIRAAQLGMSVAVVEKRSALGGVCLNEGCIPSKALLDSSELFALAR  66
            DL+VIGAG+GGYVAAIRAAQLG  V +V+K + LGGVCLN GCIPSKAL+ +SE     R
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASE-----R  94

Query  67   DRFAGHGIAID-----PPRLDLARMMARKDDVVKKLTDGVAFLFKKNKIARVQGTARLTG  121
             +   H+ +++       ++D++ ++ +KD++V+KLTDG+  L+K N +  + G A LT 
Sbjct  95   VKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  122  ERDGAHGVDVEGGDQGPGTGDREKQTLRGKRVLLATGSEAAVIPFMPFDGELVVSAREAL  181
             + +   + +E+          E Q +  K ++LA GS +  +  MPFD   ++S+ EAL
Sbjct  155  AHIAK--IKIED----------EEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEAL  202

Query  182  SFDRVPEHLLVVGAGYVGLELGSVWRRLGSQVTVVEMLPKMLPNTDGQVADTLMGSLKKQ  241
             ++ VP+HL+VVG+GY+GLELG+   ++G++VT++E    +L+ TD  ++ T+   LK  
Sbjct  203  QLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEI  262

Query  242  GIVFRMETKVTGFAKRDGKAAVTVEAGGATEEIVCDRVLVAAGRRPLTaglgleelgvrl  301
            GI    ++ V G  + ++   V V+ +G  E I CD  LV+ GR+P T+ +GLE++GV L
Sbjct  263  GITVITDALVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVL  322

Query  302  eagr-IAVDDNYQTSLRGIYAIGDLIHGPMLAHKAMAEGEVFAERLTGQASVVDYAYIPG  360
            +    I ++++ QT++  +YAIGD   G +LAHKA  E+ + AE ++GQ SV+D+  +P 
Sbjct  323  DDQGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPF  382

Query  361  IVYTWPEAAGVGRTEEELKTEGVEYRVGKFPFMANGRAKCMDETEGFVKILATPDTGRVL  420
            ++++ PE A  G TE E K  G E   ++FPF AN+RA  + +++GFV+++A  +T RVL
Sbjct  383  VIFSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVL  442

Query  421  GIHVIGPRASDVIAEAVTVMTYGGSAADIAMTFHAHPTLAEAMKEAALDVEKRAIH  476
            G++++GP  S +IAEAV  +  G++A D+++T+HAHPTL+E++ EAA +V  +A H
Sbjct  443  GVQMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

776) NMBM01240355_0954 in NC_017517


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  245 bits (916),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 194/464 (42%), Positives = 304/464 (66%), Gaps = 16/464 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   EHFHAAQHDFAEHGITV-GDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTAS  123
            E+    +H     G+ V G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A 
Sbjct  93   ERVKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAY  151

Query  124  FAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEV  183
            ++  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EV
Sbjct  152  LTEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEV  207

Query  184  PAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLNI  243
            P  L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+ +
Sbjct  208  PNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITV  266

Query  244  ELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDER  303
              +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++
Sbjct  267  ITDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQ  325

Query  304  GFIKVDGGCRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIY  363
            GFIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI+
Sbjct  326  GFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIF  385

Query  364  TDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVH  423
            +DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+
Sbjct  386  SDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  424  MIGPVVSELVIEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            M+GP VS L+ E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

777) BSn5_02565 in NC_014976


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  245 bits (916),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 316/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEADGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQTNIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR+ N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAADGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +  G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

778) ZPR_4064 in NC_014041


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  245 bits (914),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 196/457 (43%), Positives = 314/457 (69%), Gaps = 6/457 (1%)

Query  1    MDKY-DLTIIGSGPGGYVCAIRAAQLGFKVAIIERYNTLGGTCLNVGCIPSKAWLEASEH  59
            + KY DL +IG+G+GGYV AIRAAQLG KV ++++   LGG CLN GCIPSKA + ASE+
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YYKLKHQFENFGIDVK-EANVDILKMNQRVQDVVQEIINGVDYLMKKNKVAVYQGHGTIK  118
               +KH  +  G+ V  E +VD+  + ++ +++V+ + +G+  L+K N V V  G++ + 
Sbjct  95   VKHIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLT  153

Query  119  DKNTIEikggdktetittdkiiiatgSKPASLPNIKIDKKRIISSTEALALQEIPKHLMv  178
            + +   IK  D  + ++   +I+A GS P  L ++ +D+KRIISSTEAL LQE+P+HL+V
Sbjct  154  EAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVV  213

Query  179  vgggvigveigsvFARLGSKVSIVEYFDSLIATMDGALGHQLHRSLRKQGIDFYLEHKVT  238
            VGGG IG+E+G+ +A++G+KV+I+E  D++++  D  L   + R L+  GI    +  V 
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  239  NATATEDKVELKAENLSDKEEMSLDGDYCLMAIGRKPYTASLGLENIGVETNEKGQITVD  298
             +  T D V++  + + +KEE+ ++ DYCL++IGRKP T+ +GLENIGV  +++G I ++
Sbjct  274  GGENTGDEVNVHVQ-VDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  299  KNLETNVKGVYAIGDVIRGAMLAHKASEEGVFVAESIAGQKPHINYSLIPNIVYTQPEVA  358
            ++ +TN+  VYAIGD   G +LAHKAS E+ + AE I+GQ++ I++  +P +++++PEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  GVGLTEEELKKTNRSIKTGSFPYKANARAKISMDTDGFIKVIADKETDEILGVHMIGPRI  418
              GLTE E K       ++ FP++ANARA    D+DGF++V+A+K+T  +LGV+M+GP +
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  419  ADSYTEAVVAMEFRAAAEDIARMSHGHPTFSETFKEA  455
            +   +EAV A+E  A AED++   H+HPT++E + EA
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

779) Sph21_1690 in NC_015277


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  245 bits (914),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 192/460 (42%), Positives = 317/460 (69%), Gaps = 6/460 (1%)

Query  4    DVVVIGSGPGGYVAAIRCGQLGLKTAIIEKYSTLGGTCLNVGCIPSKALLDSSEHYHNAN  63
            D++VIG+G+GGYVAAIR +QLG K  +++K + LGG CLN GCIPSKAL+ +SE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHFAEHGINLS-NLKVDLKQMIKRKNGVVEQTTGGITFLMKKNKVTTYQGVGSFVdknti  122
            KH    G+++S +++VD+ +++K+K+G+V++ T+GI  L+K N V    G  +++    I
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  123  kitkddktteeittknVIIATGSKPASLPFITIDKKRIITSTEALNLTEVPKHlvliggg  182
               K +   + ++ K++I+A GS P  L  + +D+KRII+STEAL+L EVP+HLV++GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  viglelgSVYARLGAKVTVIEYLDSIIPTMDKGLGKELQKSLKNLGFEFLLSHKVTGASV  242
             IGLELG+ YA++GAKVT++E  D+I++  D  L K +++ LK++G+  +    V G+  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  243  KGKTVTVTAEDTKGNPVKVEGDYCLVAVGRTAYTEGLNLDAVGIKLEERGKKVPVNEHLE  302
             G  V V  +   G+   ++ DYCLV++GR + T  + L+ +G+ L+++G  + +N+  +
Sbjct  278  TGDEVNVHVQ-VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF-IKINNKCQ  335

Query  303  TPVAGIYAIGDVIRGAMLAHKAEEEGVYVAELIAGQKPHINYNLIPGVVYTWPEVASVGA  362
            T +  +YAIGD   G +LAHKA  E+   AE+I+GQ++ I+++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  363  TEEQLKNDGIKYKAGSFPFKASGRARASMDTEGFVKVLADAGTDEILGVHMIGPRVADMI  422
            TE + K+ G    ++ FPF+A++RA +  D++GFV+V+A+  T  +LGV+M+GP V+ +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  423  AEAVVGMEYRASAEDIARICHAHPTFTESFKEAALAATGN  462
            AEAV ++E  A+AED++   HAHPT+ E++ EAA +  G+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGH  495

780) I653_11540 in NC_020832


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  245 bits (915),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 317/470 (68%), Gaps = 14/470 (2%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEADGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAARVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAADGKAIH  473
            P+V+ +I+EA +A   +A + +++ TIH+HPTL+E++ EAA +  G A H
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

781) Halhy_3353 in NC_015510


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  245 bits (913),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 190/448 (43%), Positives = 301/448 (68%), Gaps = 7/448 (1%)

Query  2    KY-DVTVIGSGPGGYVAAIRCAQLGLKTAIIERYNALGGTCLNVGCIPSKALLDSSEHYH  60
            KY D+ VIG+G+GGYVAAIR AQLG K  ++++   LGG CLN GCIPSKAL+ +SE+  
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVK  96

Query  61   AAKEKFSEHGIELE-NLQVNMPQMVKRKNEVVSQTVKGVEFLMKKNKIDVYYGFGSFVSA  119
              K+  +  G+ +  ++QV+MP++VK+K+ +V++   G+  L+K N ++V  G  ++++ 
Sbjct  97   HIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTE  154

Query  120  NLIRVAKEDGTTQDLETDKTIIATGSKPIVPANFNYDKKRVITSTEALNIEKVPARMvii  179
              I   K ++  Q +     I+A GS P+   +  +D+KR+I+STEAL+++ VP ++V++
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  180  gggvigLELGSVYARLGTKVDVIEYLDRIIPGMDGDCSKELQRALGKAGIKFHLKHMVTA  239
            GGG IGLELG+ YA++G+KV ++E  D I++G D   +K ++R L   GI      +V +
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  240  VTPSADGVVVEYQKRDTDEKLSIEADYCLVAIGRRPFTDKLGLENAGVLADEKGRIAVDD  299
               ++D V V+ Q  + +E   I+ DYCLV+IGR+P T+K+GLEN GV+ D++G I +++
Sbjct  275  GENTGDEVNVHVQVDGKEE--IIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  300  HLQTNVPGIYAIGDVIKGAMLAHKAEEEGVFVAETIVGQKPHIDYNLIPGVVYTWPEVAG  359
              QTN+  +YAIGD   G +LAHKA  E+ + AE I GQ++ ID++ +P V+++ PEVA 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  360  VGQTEEQLKEAGVPYKVGKFPFKALGRARASMDTDGMVKVLSHQVSDEILGVHMVGPRTA  419
             G TE + KE G     ++FPF+A +RA +  D+DG V+V++++ +  +LGV+MVGP  +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  420  DMIAEAVALMEFRASAEDAARMSHAHPT  447
             +IAEAV  +E  A+AED +   HAHPT
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPT  480

782) FIC_01592 in NC_013062


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  244 bits (912),  Expect = 8e-66, Method: Compositional matrix adjust.
 Identities = 191/452 (43%), Positives = 314/452 (70%), Gaps = 3/452 (0%)

Query  5    DVTVIGSGPGGYVAAIRCAQLGFKTAIIEKYPTMGGTCLNVGCIPSKALLDSSEHFENAK  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + +GG CLN GCIPSKAL+ +SE+  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HTFANHGIIIDEPKADLARMIARKNEVVEQTTKGIQFLMDKNKITVFEGVGSFESATQIK  124
            H+ +    + +E + D++ ++ +K+ +V++ T GI+ L+  N + V+ G  ++ + ++I 
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHIA  158

Query  125  VTKNDGATEIIDSKYTIIATGSKPSSLPFISLDKERVITSTEALELKEIPKHlvvigggv  184
              K ++  +I+  K  I+A GS P  L  +++D+ R+I+STEAL+L+E+P+HLVV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  185  iglelgSVYKRLGSEVTVVEFMDKIIPTMDGALSKELNKVLRKQGIKFMLSTAVQAVERN  244
            IGLELG+ Y ++G+ VT++E  D I++  D  L+K +++ L+  GI  +  + VQ+ E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  245  GDAVKVTAKDKKGEEVVVEGDYVLVSVGRKPYTDGLALEKAGVDLDERGRVKTNGHLQTN  304
            GD V+V   +  G E +++ DY LVS+GRKP T+ ++LE+ GV LD++G +K N   QTN
Sbjct  279  GDEVNVHV-QVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  305  VSNIYAIGDVVAGAMLAHKASEEGVLVAEQLAGQKPHINYNLIPGVVYTWPEVAAVGKTE  364
            + ++YAIGD  +G +LAHKAS E+ + AE ++GQ++ I+++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  365  EQLKEEGVAIKVGNFPMRALGRSRASGDIDGFVKIIADEKTDEVLGVHMIGaraadmiaa  424
             + KE G     + FP +A +R+ + +D DGFV+++A+ +T  VLGV+M+G+  + +IA 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  425  avtaMEFRASAEDIARMSHAHPTFAEAIKEAA  456
            AV A+E  A+AED++   HAHPT++E++ EAA
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

783) lpdA in NC_016620


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  243 bits (906),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 187/451 (42%), Positives = 311/451 (69%), Gaps = 4/451 (0%)

Query  5    DVVVIGSGPGGYVCAIRMAQLGFKTAIVEKYPTLGGTCLNVGCIPSKAWLESSERFYDAS  64
            D++VIG+G+GGYV AIR AQLG K  +V+K + LGG CLN GCIPSKA + +SER  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HHFADHGIETGKVKVDISKMSARVQKVVSDTCGGIDFLMKKNKIEVLRGVGSLKDKNTvv  124
            H  +     +G V+VD++ +  + + +V+   +GI  L+K N +EV+ G + L + +   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  125  vkgekeievka-kNIVLATGSKPSTLPFIKLDKERVITSTEALKLEEVPKHLvvigggvi  183
            +K E E ++ + K+++LA GS P  L  + +D+ R+I+STEAL+L+EVP+HLVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  184  gLEMGQVFLRLGAKVSVVEYADSMIAAMDSELGKNLQRVLKKQGMEFYAGHGVTSVERKG  243
            GLE+G  + ++GAKV+++E +D+++++ D+ L K ++R LK  G+   ++  V + E  G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  KKVTVVAKKNKDGKEVKIESDYCLVAVGRRPFTDGLGLENAGVQVDERGVVVTDHNLQTS  303
              V V    + DGKE  I+ DYCLV++GR+P T+ +GLEN GV +D++G +  +++ QT+
Sbjct  280  DEVNV--HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  304  VPNIYAIGDIVKGPMLAHKAEEEGVYVAELLAGQKPHLNYNLIPGVVYTWPEVSSVGQTE  363
            + ++YAIGD   G +LAHKA  E+   AE+++GQ++ ++++ +P V+++ PEV+  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  364  EQLKASKVPYKKGSFPFKASGRARAGNESDGLIKVLAHKDTDEILGVHMIGPRCADLIGE  423
             + K        + FPF+A++RA + +++DG+++V+A+K+T  +LGV+M+GP  + LI+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  424  AVVAMEFRASAEDIARICHGHPTYTESFKEA  454
            AV A+E  A+AED++   H+HPT  E++ EA
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

784) lpdA3 in NC_008767


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  243 bits (906),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 305/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDVKFDVAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+V+ D++ ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSIE  244
              L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

785) R2APBS1_1493 in NC_020541


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  243 bits (906),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 193/472 (41%), Positives = 317/472 (68%), Gaps = 13/472 (2%)

Query  4    KF-DVIVIGAGPAGYVAAIRAAQLGLKAACVDDFSGKDGKQALGGTCLNVGCIPSKALLD  62
            K+ D++VIGAG++GYVAAIRAAQLG K   VD       K  LGG CLN GCIPSKAL+ 
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVD-------KAELGGVCLNRGCIPSKALIS  90

Query  63   SSRQYWNIAHNLPVHGISVEGA-KVDMATFIGRKDKIVKQFTGGIGQLFKANKVAAFHGK  121
            +S +  +I H   + G+ V G  +VDM+  + +KD IV+++T+GI  L+K+N V  + G 
Sbjct  91   ASERVKHIKHANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGE  149

Query  122  GKLLKGNSVEITATDGSRQTLSATNVILASGSVPIELPFAKFDGKAIVDNAGALDFAEVP  181
            + L  ++   I   D   Q +S  ++ILA GS+P+EL    FD K I+ ++ AL++ EVP
Sbjct  150  AYLTEAHIAKIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  182  KRLGVIGAGVIGLELGSVWRRMGAEVTIIEALPEFLaaadadiakvaakEFAKQGLSIkl  241
            ++L V+G+G IGLELG+   + GA VTI+E+   +L+++D+ ++K   +++   G+++  
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVIT  268

Query  242  naklnkaeakkDGVHLTYTDKDGEQQLVVDKL-LVAVGRRAYTAGLLAEDTGVKLDERGR  300
            +A ++ +E   D V++   + DG ++++     LV++GR++ T+ +  E+ GV LD++G 
Sbjct  269  DALVQGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  301  IVVDEHNHTGVDGVWAIGDAVRGPMLAHKGSEEGIAVAEWIAGKAGHVNFDTIPWVIYTE  360
            I +++  +T ++ V AIGD   G +LAHK+S E+   AE I+G+ + ++F+++P VI+++
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  361  PEIAWAGKTEKELKDAGIPYKVGTFPFAAIGRAVAMNEAVGQVKMLAHADTDRILGVHMV  420
            PE+A +G TEKE K+ G     + FPF A +RA+++++A G V+++A+ +T R+LGV+MV
Sbjct  388  PEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMV  447

Query  421  GPGVSELIAECVVAMEFKGSSEDLARIVHAHPTLSEAVHEAALSVDKRAIHK  472
            GP VS LIAE V A+E  +++EDL+  +HAHPTL+E++ EAA +V  +A H 
Sbjct  448  GPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

786) Ssed_0433 in NC_009831


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  243 bits (907),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 185/460 (41%), Positives = 312/460 (68%), Gaps = 14/460 (3%)

Query  1    MSNEIK--TQVLVVGAGPAGYSAAFRAADLGLEVIIVERFNTLGGVCLNVGCIPSKALLH  58
            M+ E+K   ++LV+GAG++GY AA+RAA+LG  V++V++   LGGVCLN GCIPSKAL+ 
Sbjct  32   MTGEVKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALIS  90

Query  59   VSKVIEEAKAVASHGV-VFGEPQIDLDKLRSFKETVISQLTTGLGGMSKMRKVDVVNGFG  117
             S  + + K   + G+ V GE Q+D+  +   K+ ++++LT G+  + K   V+V++G +
Sbjct  91   ASERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA  150

Query  118  KFTSPNTIEVTGEDGVKVIRFEQAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPGK  177
             +T ++   +  ED  +++ + + I+A GS P++L  +P ++ RI  ST+AL+L+EVP  
Sbjct  151  YLTEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNH  210

Query  178  LLVMGGGIIGLEMGTVYSSLGSEIDVVEMFDQVIPAADKDIVRVYTKKIKK-KFNLILQT  236
            L+V+GGG IGLE+GT Y+ +G+ + ++E  D +++++D  + +   + +K   + +I ++
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  237  KVTAVEAKED--GIYVSMEGKKAPAEPVRYDAVLVAIGRTPNGKLIDAEKAGVNIDERGF  294
             V + E   D   + V ++GK    E ++ D  LV+IGR PN   I+ E+ GV +D++GF
Sbjct  271  LVQGGENTGDEVNVHVQVDGK---EEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGF  327

Query  295  INVDKQMRTNVPNIYAIGDIVGQPMLAHKGVHEGHVAAEVISGLKHFFDPKVIPSIAYTD  354
            I+++++ +TN+ ++YAIGD  G  +LAHK+  E+ +AAEVISG +  +D + +P + ++D
Sbjct  328  IKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSD  387

Query  355  PEVAWVGLTEKEAKEQGVAYETAT--FPWAASGRAIASDCSDGMTKLIFDKETHRvigga  412
            PEVA  GLTEKEAKE+G  YET +  FP  A++RA++   +DG  +++ +K+T RV+G  
Sbjct  388  PEVAYTGLTEKEAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQ  445

Query  413  ivgvnggellgeiglaiemgCDAEDLALTIHAHPTLHESV  452
            +VG + + L++E  +AIE G +AEDL+LTIHAHPTL E++
Sbjct  446  MVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPL  485

787) Smed_2936 in NC_009636


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  243 bits (906),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 189/466 (41%), Positives = 310/466 (67%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHVAE  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLDALGVEVATP-KLNLQKMMAHKDATVKSNVDGVAFLFKKNKIDGFQGLGKVLGQGKV  122
            H+ +++G+ V+   ++++  ++  KD+ V+   DG+  L+K N ++ + G    L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  123  AVANEKGEEQVLEAKNVVIATGSDVAGIPGVEVPFDEKIIVSSTGALALEKVPASMivvg  182
            A  +  +EEQ++  K++++A GS    + ++  PFD+K I+SST AL L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSM--PFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggvigLELGSVWARLGAKVTVVEYLDTILGGMDGEVAKQLQRMLTKQGLDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   G+    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSDEGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTEGLGLAKAGVVLDQRGRVEIDQH  302
             ++++  +V  +   +G    ++ +  L++ GRKP+T  +GL + GVVLD++G + I++ 
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSITGVYAIGDVVRGPMLAHKAEDEGIAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GRTEEELKAAGVAYKVGKFPFTANGRARAMLQTDGFAKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGF +++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

788) lpdA3 in NC_014752


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  243 bits (905),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 304/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNILDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  I+ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGSEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSIE  244
              L V+G+G IGLE+G+   + G+ VTILE++ T+L+++D  ++K   + + KE G+++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFSANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

789) NMBG2136_0928 in NC_017513


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  242 bits (904),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 305/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDVKFDVAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+V+ D++ ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSIE  244
              L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELLTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

790) NMBH4476_1216 in NC_017516


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  242 bits (903),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 304/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSIE  244
              L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

791) lpdA1 in NC_003112


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  242 bits (903),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 304/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+V+ D + ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSIE  244
              L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

792) lpdA3 in NC_003116


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  242 bits (904),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 192/463 (42%), Positives = 305/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDVKFDVAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+V+ D++ ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLSIE  244
              L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+++ 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELLTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

793) Aeqsu_3053 in NC_018013


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  242 bits (902),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 190/449 (43%), Positives = 306/449 (69%), Gaps = 6/449 (1%)

Query  1    MSKY-DVAIIGSGPGGYVAAIRCAQLGMKTAIIEKYSVLGGTCLNVGCIPSKALLDSSHH  59
            + KY D+ +IG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASER  94

Query  60   YEDAMKHFEEHGIEIPGDIKLNFKKMIERKASVVDQTTKGIAFLMDKNKIDVFTGMGAFK  119
              + +KH +  G+ ++G+++++   ++ +K ++V++ T GI  L+  N ++V++G  A+ 
Sbjct  95   VKH-IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYL  152

Query  120  DATHIE-ITNGKKTETIEAANTIIATGSKPSTLPFIKLDKDRVITSTEALSLKEIPKHlv  178
              +HI  I      + +   + I+A GS P  L  + +D+ R+I+STEAL L+E+P+HLV
Sbjct  153  TEAHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLV  212

Query  179  vigggviglelgQVYHRLGSEVTVVEYMDRIIPTMDAAQSKELLKVMKKQGVKFNLSHKV  238
            V+GGG IGLELG  Y ++G+ VT++E  D I++  D+  +K + + +K  G+       V
Sbjct  213  VVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALV  272

Query  239  SAVSKKGKEVTVTATDKNDKEVTFKGDYCLVSVGRKPYTDGLKAENAGVKITERGMIDVN  298
             +  + G EV V   + ++KE  ++ DYCLVS+GRKP T+ +  EN GV + ++G I +N
Sbjct  273  QGGENTGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKIN  331

Query  299  DHLQTNIKNIYAIGDVVRGAMLAHKASEEGVLVAEIIAGQKPHIDYNLIPGVVYTWPEVA  358
            +  QTNI ++YAIGD   G +LAHKAS E+ + AE+I+GQ++ ID++ +P V+++ PEVA
Sbjct  332  NKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVA  391

Query  359  SVGKTEEQLKEAKVEYKVGQFPMRALGRSRASGDTDGFVKILSDKKTDEVLGVHMVGARV  418
              G TE + KE   E   ++FP +A +R+ + +D+DGFV+++++K+T  VLGV+MVG+ V
Sbjct  392  YTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEV  451

Query  419  ADLIAEAVVAMEFRASAEDIARMSHAHPT  447
            + LIAEAV A+E  A+AED++   HAHPT
Sbjct  452  SSLIAEAVFAIEAGANAEDLSLTIHAHPT  480

794) ZPR_2851 in NC_014041


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  241 bits (900),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 187/444 (43%), Positives = 306/444 (69%), Gaps = 4/444 (0%)

Query  5    DVAVIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYHDAV  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFEDHGIEISGEVKVNLEKMMDRKASVVSQTCDGVKFLMDKNKIDVFEGIGSFKDKTHI  124
            KH +  G+ +SGEV+V++  ++ +K ++V++  DG++ L+  N ++V+ G  ++   +HI
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  125  NIEKNDGETETIEAKKTIIATGSKPANLPFIELDKERVITSTEALKLKEIPKHliiiggg  184
               K ++E + +  K  I+A GS P +L  + +D+ R+I+STEAL+L+E+P+HL+++GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  185  viglelgQVYKRLGADVSVVEYMDRIIPTMDSALSKELTKVLKKQGVKFYTSTKVKSVER  244
             IGLELG  Y ++GA V+++E  D I++  D+ L+K + + LK  G+   T + V++ E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  NGdeivvkaddkkdkevelkgdYCLVSVGRRPYTDGLNADAAGVEIDDKGRIAVNEHLQT  304
             GDE+ V  +     E+   + YCLVS+GR+P T+ +  +  GV +DD+G I +N+  QT
Sbjct  278  TGDEVNVHVQVDGKEEIIQCD-YCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  305  NVENIYAIGDVVKGVMLAHKAEEEGSFVAEVIAGQKPHINYNLIPGVVYTWPEVASVGKT  364
            N+E++YAIGD   G +LAHKA  E+ + AEVI+GQ++ I+++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  365  EEQLKEDGVKYKEGKFPMRALGRSRASGDIDGMIKILADEKTDEVLGVHMIGARTADLIA  424
            E + KE G     ++FP +A +R+ + +D DG ++++A+ +T  VLGV+M+G+  + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  425  EAVTAMEFRASAEDIARMSHAHPT  448
            EAV A+E  A+AED++   HAHPT
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPT  480

795) TVN0099 in NC_002689


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  241 bits (900),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 187/459 (41%), Positives = 314/459 (69%), Gaps = 29/459 (6%)

Query  3    DAVVLGAGPGGYAAAIRLGQRKKKVAIIEKDKIGGECLNYGCIPSKAIIELANSINYLKE  62
            D +V+GAG+GGY AAIR +Q  KKV +++K  +GG CLN GCIPSKA+I  ++ ++ +K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  63   MPGVSI----NYNVDMKKWQEWKWSMINKLTGGVELLLKAYGVDIFRGTGYIQDKNHVKV  118
               +++    + +VDM     WK +++NKLT+G+  LLK+ GV+++ G +Y+ + +  K+
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  119  ----NDKVLETDSLVIATGSKPVSINGI----NDVMYNREVLDLDHIPSSiviigggyig  170
                +++++    L++A GS PV ++++    + ++ + E L+L+++P+ +V++GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  171  veigiALAKLGSKVTIVEMMPSILPGTDNELVRHVVRRMSQLGINVITGRKVLSTAKNGE  230
            +E+G A AK+G+KVTI+E   +IL+GTD  L + V R++ ++GI VIT+  V +  + G+
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  231  ---VTVKLDDGQEL-RAEKVLMTVGRIPNTEGFGLENLKLAMDGR-FIKTDSRKMTSVKG  285
               V V++D+ +E+ + +  L+++GR PNT  +GLEN+ + +D++ FIK +++  T++  
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  286  VYAIGDVSGQPMLAHKAYYEADIAADNICGIDSEVDYRAMPYVIYSDPEIAYTGV--KGA  343
            VYAIGD +G  +LAHKA YEA IAA+ I G +S +D++AMP+VI+SDPE+AYTG+  K A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  344  K-------STRFPVAANGRSLTMNENIGTFNIYYDEKGI--VTGAGIAAPHASELISEIS  394
            K       S+RFP  AN+R+L++++  G F     EK    V G  + +P+ S LI+E  
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADG-FVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  395  LAVESGLMAMDIGLTIHPHPTVSEGVKESAEEVYGKPLH  433
            +A+E+G  A D++LTIH+HPT++E + E+AE V G + H
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

796) NMBM01240149_1132 in NC_017514


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  241 bits (900),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 191/463 (42%), Positives = 303/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDIKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+++ D + ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLNIE  244
              L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+ + 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

797) NMBNZ0533_1006 in NC_017518


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  241 bits (900),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 191/463 (42%), Positives = 303/463 (66%), Gaps = 14/463 (3%)

Query  5    DVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKALLQSS  64
            D++VIGAG+GGYVAAIRAAQLG K   VD         + LGG CLN GCIPSKAL+ +S
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK--------AELGGVCLNRGCIPSKALISAS  92

Query  65   ehfhaaqhefaehGITVGDIKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFGTASF  124
            E+    +H  +      G+++ D + ++ +KD+IV KLT+G++ L++ N V  + G A +
Sbjct  93   ERVKHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYL  152

Query  125  AGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNLTEVP  184
            +  +    +IE    +E  ++  K++I+A GS+P  L  +++D+  ++ +  AL+L EVP
Sbjct  153  TEAHIAKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVP  208

Query  185  AKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPTFLAAADQQIAKEAFKYFTKEQGLNIE  244
              L V+G+G IGLE+G+   + GA VTILE++ T+L+++D  ++K   + + KE G+ + 
Sbjct  209  NHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHL-KEIGITVI  267

Query  245  LGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEKDERG  304
             +  + +  + G  V+V  +  + E   +  D  +V+IGR PNT  +  E +G+  D++G
Sbjct  268  TDALVQGGENTGDEVNVHVQVDGKEEIIQC-DYCLVSIGRKPNTGKIGLENIGVVLDDQG  326

Query  305  FIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPFVIYT  364
            FIK++  C+TN+ +V AIGD   G +LAHKAS E+   AE I+GQ++ IDF+ +PFVI++
Sbjct  327  FIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFS  386

Query  365  DPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRILGVHM  424
            DPE+A  G TE + K  G E   +   F AN+RAL+++ A G V+V+A+ +T R+LGV+M
Sbjct  387  DPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQM  446

Query  425  IGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAA  467
            +GP VS L++E+V A+E  A++ED++  IHAHPTL+E + EAA
Sbjct  447  VGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

798) pdhD in NC_015844


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  240 bits (896),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 188/445 (43%), Positives = 307/445 (69%), Gaps = 4/445 (0%)

Query  5    DVAIIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYEDAI  64
            D+ +IG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFEEHGIDIPGEIKVNLGQMIARKAAVVKQTCDGVKFLMDKNKIDVFEGFGSFKDASHI  124
            KH +  G+ ++GE++V++ +++ +K ++V++  DG++ L+  N ++V+ G  ++   +HI
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  125  NIKKNDGSTETIEAKNTIIATGSKPSTLPFIKIDKERIITSTEALELKEIPKHliviggg  184
               K ++  + +  K+ I+A GS P  L  + +D+ RII+STEAL+L+E+P+HL+V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  185  viglelgqvYKRLGAEVTVVEYMDRIIPTMDAGLSkeltkvlkkqkvklnvSHKVKSVER  244
             IGLELG  Y ++GA VT++E  D I++  D+ L+K + + LK   + +     V++ E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  KGDEIIVKADDKKGQEVELKGDYCLVSVGRRPYTDGLNAEAAGVKIDERGKIEVNDHLQT  304
             GDE+ V  +    +E+ ++ DYCLVS+GR+P T+ +  E  GV +D++G I +N+  QT
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  305  STPNIYAIGDVIKGAMLAHKAEEEGTFVAEQLSGQKPHIDYNLIPGVVYTWPEVASVGKT  364
            +  ++YAIGD   G +LAHKA  E+ + AE +SGQ++ ID++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  365  EEQLKEAGVAYKTGQFPMRALGRSRASMDLDGFVKILADKETDEVLGVHMIGARAADLIA  424
            E + KE G    +++FP +A +R+ +  D DGFV+++A+K+T  VLGV+M+G+  + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  425  EAVTAMEFRASAEDISRMSHAHPTF  449
            EAV A+E  A+AED+S   HAHPT+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTL  481

799) Oter_4192 in NC_010571


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  240 bits (897),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 192/476 (41%), Positives = 305/476 (65%), Gaps = 17/476 (3%)

Query  7    DLIVIGAGPGGYVCAFRAAQLGMKVALVDKRPTLGGTCLNVGCIPSKALLHSSEHVTWAQ  66
            DL+VIGAG+GGYV A+RAAQLG KV LVDK + LGG CLN GCIPSKAL+ +SE+V   +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HHAAEHGIKL-GQVELDLEAFMKRKDEVVAKLVGGVAQLAKARKITVVHGAASFLDRNTV  125
            H A   G+K+ G+V++D+   +K+KD +V KL +G+  L K+  + V+ G A +L    +
Sbjct  100  H-ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  126  AVAGVADPGQPGSTSPATSRQTLTAPNIVIATGSAPVELPFLKFDGKTIVSSDHAIAFAS  185
            A   + D  Q            ++  ++++A GS PVEL  + FD K I+SS +A+ +  
Sbjct  158  AKIKIEDEEQ-----------IFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE  206

Query  186  VPKKLVVVGGGAIGLELGSVWSRLGSDVTVVEFLPKIVANYDDDIVRNFSRILTKQGLKI  245
            VP+ LVVVGGG IGLELG+  +++G+ VT++E    I++  D  + +   R L   G+ +
Sbjct  207  VPNHLVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV  266

Query  246  ETGAKVTGFRPSTAGATGILTAERDGKKLEFEADKVLVSVGRHPFTDGLALEKAGVQLDE  305
             T+A V G     +G    +  + DGK   ++ D  LVS+GR P T+ ++LE+ GV LD+
Sbjct  267  ITDALVQG--GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDD  324

Query  306  KKRIKVDDHLRTTAPGIWAIGDVIAGPMLAHKAEEDGVAVAEWIAGKAGHVNWDLVPAIV  365
            +  IK+++  +T    + AIGD  +G +LAHKA  ++   AE I+G+ + ++ + +P ++
Sbjct  325  QGFIKINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVI  384

Query  366  YTSPEVAAVGLGEDgakakglavkvgkFnlaangraiaanaTDGYVKIIADAKTDRILGC  425
            ++ PEVA  GL E  AK KG     ++F + AN+RA++ + +DG+V+++A+ +T R+LG 
Sbjct  385  FSDPEVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGV  444

Query  426  QILGNNAGELISEVVTHMEYGGSAEDLGRTIHAHPTMSEAVKEAGLAVSKSAIHAL  481
            Q++G + + LI+E V  +E G++AEDL+ TIHAHPT++E++ EA+ +V   A H L
Sbjct  445  QMVGPEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHML  500

800) TCCBUS3UF1_20200 in NC_017278


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  240 bits (894),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 195/461 (43%), Positives = 316/461 (69%), Gaps = 10/461 (2%)

Query  4    DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEAALGGTCLRVGCIPSKALLETTERIYEVK  63
            DLLVIGAG+GGYVAAIRAAQLG KV +V+K A LGG CL  GCIPSKAL+ ++ER+ ++K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   KGLP-GARVKG-LELDLPGLMAHKDKVVQANTQGIAFLFKKNGIARHQGRARFLSER---  118
             +   G +V G +++D+P ++  KD +V+  T+GI  L+K NG+    G A +L+E    
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHIA  158

Query  119  KVRVEETGEEISARYILVATGSAPLIPPWAEVDHERVVTSTEALSFPEVPSRlvvvgggv  178
            K+++E+  + +S + +++A GS P+       D+ R+++STEAL + EVP++LVVVGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  179  iglelgvvWHRLGAEVVVLEYLDRILPTMDAELSRAAEKVFKKEGLAIRTGVRVASVRPA  238
            IGLELG    ++GA V +LE  D IL+  D+ L+++  + +K  G+++ T+  V +   +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  239  GR--GARVELEG-GEVFEADRVLLAVGRRPYTEGLDLEKAGLATDERGRIPVDEHLRTRI  295
            G     +V+++G  E+++ D  L+++GR+P T  ++LE+ G+  D++G I +++  +T I
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  296  PHIYAIGDVIRGPMLAHKASEEGLAAVEHMAQGLGHVDYQAIPSVVYTHPEVAGVGYTEE  355
             H+YAIGD   G +LAHKAS E+  A E ++   + +D+QA+P V++++PEVA  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  356  ELKAKGIPYKVGRFPYSANGRARAMGETEGFVKVLAHAQTDRILGVHGIGARVGDVLAEA  415
            E K KG     +RFP+ AN+RA ++++++GFV+V+A+ +T R+LGV+ +G+ V+ ++AEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  416  ALAIFFKASAEDVARAPHAHPSLSEILKEAALGAWEKPIHL  456
             +AI   A+AED++ + HAHP+L+E L EAA G    + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

801) M446_2168 in NC_010511


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  240 bits (895),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 186/444 (42%), Positives = 296/444 (67%), Gaps = 6/444 (1%)

Query  4    DLVVIGTGPGGYVCALRAAQLGLKTAVVEKRAAHGGTCLNVGCIPSKALLHASEAFEETT  63
            DL+VIG+G+GGYV A+RAAQLG K  +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI-  98

Query  64   KHLPVLGITV-GQPQLDLARMMAFKQEGVDGNTKGVAYLLKKNGVESFQGVGRLAGAGRV  122
            KH   +G+ V G+ Q+D++ ++  K+  V+  T G+  LLK NGVE + G + L+ A   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  EVRSEDGGNHLLETRNIVIATGSDVANLPGVTIDEEVVVSSTGALDLKAVPERLLIIGAG  182
             ++ ED  ++++  +++++A GS   +L ++ +D+  ++SST AL+L+ VP++L+++G+G
Sbjct  159  KIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGSQVTVVEYLDRILPGMDGEVGKQFQRILEKQGVTFRLSSKVTGVER  242
             IGLELG+   ++G++VT++E  D IL+G D  + K  +R L   G+T    + V G E 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE-  276

Query  243  TNAGAKVTVEPaaggaaealeadvvlvaIGRVPYTAGLGLDTVGVQVDNKGRILTDNHYA  302
             N+G  V V+   +G  E ++ D  LV+IGR P T+ +GL+ +GV +D++G I  +N   
Sbjct  277  -NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  303  TNVTGIYAIGDVIAGPMLAHKAEDEGVAVAEILAGKAGHVNYGVIPNVVYTTPEVASVGK  362
            TN+  +YAIGD  +G +LAHKA  E+   AE+++G+ + +++  +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  363  SEEELKTDGIAYKTGKFPFTANGRAKVNHTTDGFVKVLADAKTDRVLGVHIVGPEAGNLI  422
            +E E K  G    +++FPF AN+RA     +DGFV+V+A+ +T RVLGV++VGPE ++LI
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  423  MEVAVAMEFGASSEDIARTCHAHP  446
             E   A+E GA++ED++ T HAHP
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHP  479

802) DMIN_00990 in NC_014004


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  239 bits (893),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 185/457 (41%), Positives = 310/457 (68%), Gaps = 9/457 (1%)

Query  2    NYYDVVVIGSGPGGYISAIRCSQLGFNTAIIEKYKDFGGTCLNVGCIPSKTLLSSAENYH  61
            +Y D++VIG+G+GGY++AIR +QLG +  +++K  ++GG CLN GCIPSK+L+S++E   
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVK  96

Query  62   KAKNMFDKHGIKF-DNLLLDFTKMMSiknniinkiCEGIKYLFIKYNIKTYLGTASFKDK  120
              K+  +  G+K  +++ +D   ++  K+ I+NK+ +GI+ L+    +    G A + + 
Sbjct  97   HIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  121  NTISI-LDSKIEIIKFTYAIIATGSKPMELPFAKIDGNKIISSTDILSLNYIPKKLSiig  179
            +   I ++   +I+ +   I+A GS P+EL    +D ++IISST+ L L+ +P+ L ++G
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  180  ggvigiELGSLYNKIGSDVTIIEYEKNIISNLDLDLSKELKNILKKNGIKFYLSTKVESI  239
            GG IG+ELG+ Y K+G+ VTI+E    I+S  D  L+K +K  LK  GI     + V++ 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  240  DIIKSNVKINAKIKKNDEINIICDCCLLSIGRIPYTNNLGLENIGIKKDKKGFILVNNNL  299
            +    +V+++ ++  ++EI I CD CL+SIGR P T ++GLENIG+  D +GFI +NN+ 
Sbjct  276  ENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  QTNIENIYAIGDVIGGLMLAHKAEKEGIFVSDKIYGNKNFINYNLIPSVIYTNPEVASVG  359
            QTNIE++YAIGD  GG +LAHKA  E+ + ++ I G+++ I+++ +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  KSEKELKYFNIKYKI--GKFPIKALGRAISSGEINGFVKILSDELTDEILGIHMIGPRVS  417
             +EKE K  +  Y    ++FP++A +RA+S ++ +GFV+++++  T  +LG++M+GP VS
Sbjct  395  LTEKEAK--EKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  418  DIIIEAVLAMEFKASSEDLSLISYAHPTFTEAVKEAA  454
             +I EAV+A+E  A++EDLSL   AHPT+ E++ EAA
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

803) Ta1435 in NC_002578


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  239 bits (891),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 192/459 (42%), Positives = 314/459 (69%), Gaps = 29/459 (6%)

Query  3    DAIIIGSGPGGYAAAIRLGQRQKKVALIEKDKIGGECLNYGCIPSKALIELANSINYLRE  62
            D ++IG+G+GGY AAIR +Q  KKV L++K  +GG CLN GCIPSKALI  ++ ++ +++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  63   MPGVSLNYS----IDMKKWQEWKWSMINRLTGGVETLCKGYGVDVIRGEAYIVDATHVKI  118
               ++L+ S    +DM     WK +++N+LT+G+ TL KG GV+VI GEAY+ +A   KI
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  119  ----GEKVIEGKNLVIATGSKPVRIKGI----DDVMYNREVLDLDHIPESTAiigggyig  170
                 E+++  K+L++A GS PV +K++      ++ + E L+L+++P+   ++GGGYIG
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIG  220

Query  171  veigTALAKLGSKVTIIEMMPSILPGTDQELVRHVERRLSQLGVRVMTGKKVLNTQHGD-  229
            +E+GTA AK+G+KVTI+E   +IL+GTD  L + V R+L ++G+ V+T+  V   ++ + 
Sbjct  221  LELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGD  280

Query  230  --KIRVNMEG-GEYVEAEKVLMTVGRVPNTEGFGLENLKLEMDGR-FIKTDAHKRTSVPN  285
              +++V+++G  E ++ +  L+++GR PNT  +GLEN+ + +D++ FIK +   +T++ +
Sbjct  281  EVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEH  340

Query  286  VYAIGDVSGQPMLAHKayydadiaadNICGMDSVVEYRAMPYVIYSDPEIAYTG--SKSA  343
            VYAIGD +G  +LAHKA Y+A IAA+ I G +SV++++AMP+VI+SDPE+AYTG   K A
Sbjct  341  VYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEA  400

Query  344  K-------STRFPVAANGRSLTMNESIGTFNIYYDEKGI--VTGAGLAAPHASELISELS  394
            K       S+RFP  AN+R+L+++++ G F     EK    V G  + +P+ S LI+E  
Sbjct  401  KEKGYETVSSRFPFQANARALSVSDADG-FVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  395  LAVESGLMAMDIGLTIHPHPTVSEGVKETAEEAYGKPLH  433
            +A+E+G  A D++LTIH+HPT++E + E+AE   G + H
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

804) Mrad2831_0926 in NC_010505


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  239 bits (893),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 190/465 (41%), Positives = 303/465 (66%), Gaps = 7/465 (1%)

Query  4    DLVVIGTGPGGYVCAIRAAQLGLRTAVVEKRATHGGTCLNVGCIPSKALLHASEAFEEAN  63
            DL+VIG+G+GGYV AIRAAQLG +  +V+K A  GG CLN GCIPSKAL+ ASE   + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   THFADLGIDV-GTPKLDLKKMMAFKAEGVAGNTKGVEFLLKKNKVDTFHGTGRIAGAGRV  122
             H   +G+ V G  ++D+  ++  K   V   T G+  LLK N V+ + G + ++ A ++
Sbjct  100  -HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA-HI  157

Query  123  EVIAEDGGNRMLETKSIVIATGSDVARLPGVTIDEKVVVSSTGALELDRVPKKLLVIGAG  182
              I  ++ ++++  K +++A GS    L ++ +D+K ++SST AL+L+ VP+ L+V+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  183  VIGLELGSVWRRLGSEVTVVEYLDRVLPGMDGEVGKQFQRILTKQGIAFKLStkvtgvev  242
             IGLELG+   ++G+ VT++E  D +L+G D  + K  +R L   GI+       + V+ 
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGIT---VITDALVQG  274

Query  243  gkkggatvtvePAAGGAAETLQADVVLVCIGRTPYTEGLGLDTVGVQRDDKGRVLTDSHY  302
            G + G  V V+   +G  E +Q D  LV IGR P T  +GL+ +GV  DD+G +  ++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  303  ATNVTGIYAIGDVIAGPMLAHKAEDEGVAIAEMLAGQSGHVNYGVIPNVVYTFPEVASVG  362
             TN+  +YAIGD  +G +LAHKA  E+   AE+++GQ++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  363  KTEEELKKDGIAYNAGKFPFTANGRAKANGTTDGFVKVLADAQTDRVLGVHIVGADAGNL  422
             TE E K  G    +++FPF AN+RA + + +DGFV+V+A+ +T RVLGV++VG++ ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  423  IAEVAVAMEFGASSEDIARTCHAHPTLTEAVKEAALAVNKRAIHV  467
            IAE   A+E GA++ED++ T HAHPTL E++ EAA +V  +A H+
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

805) Rcas_2104 in NC_009767


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  239 bits (891),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 176/434 (41%), Positives = 302/434 (70%), Gaps = 7/434 (1%)

Query  20   AAIRAAQLGLKTAVVERQAMGGVCLNVGCIPTKALLHTADLLEELREAKRFGVVVEG-VS  78
            AAIRAAQLG K  +V++  +GGVCLN GCIP+KAL+ +++ + ++++A+  G+ V G V 
Sbjct  54   AAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGEVQ  113

Query  79   LDWEATLRQKDTVVKTMTSGVSFLMKKNKVDVINGFARLAGRGQVAISTPEGQHRTVTAK  138
            +D    ++ KD +V+ +T G+  L+K N V+VI+G A L+  +++A    E++++  + K
Sbjct  114  VDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE-AHIAKIKIEDEEQIFSYK  172

Query  139  NIIVAVGARPREIPAIGAVFDNDRILSSTGGLSIPSVPKSLLVVGAGAIGVEFASMYRSF  198
            ++I+A+G+ P E+ ++   FD+ RI+SST +L +  VP+ L+VVG+G IG+E+++ Y  F
Sbjct  173  DLILAIGSLPVELKSMP--FDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKF  230

Query  199  GAEVTLVEMLPRVVPLEDEEVSAELARALNRRGIKVFAGSKLNHLEKIDGGVIARLVDAQ  258
            GA VT++E    +++  D  ++  + R L+  GI V++++ ++  E+ ++ V  + V+ +
Sbjct  231  GAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVH-VQVD  289

Query  259  GAEHALTFERALVGVGIVPNTGDIGLEEVGVALDQRGFIKVDDYMRTNVEGIYAIGDCAV  318
            G E+ +  +  LV++G  PNTG IGLE++GV LD++GFIK+++  +TN+E +YAIGDCA 
Sbjct  290  GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCA-  348

Query  319  TTPWLAHKASaegiiaaetiaghhtQPLDYGKIPSCTYCNPEIASVGLTEAKAREQGYDV  378
                LAHKAS E+ IAAE I+G+++  +D+  +P   + +PE+A  GLTE  A+E+GY+ 
Sbjct  349  GGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYET  407

Query  379  KIGKFAFTGNGKATILGQRQGFVKIVADKQYDEVLGVHMIGPRVTELIAEGGLALSHEAT  438
              ++F+F +N++A  +++ +GFV++VA+K+   VLGV+M+GP V+ LIAE+ +A+   A 
Sbjct  408  VSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGAN  467

Query  439  AESIMRTVHAHPTL  452
            AE +  T+HAHPTL
Sbjct  468  AEDLSLTIHAHPTL  481

806) Tgr7_2454 in NC_011901


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  238 bits (887),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 189/465 (41%), Positives = 320/465 (69%), Gaps = 3/465 (0%)

Query  116  QLLVLGSGPGGYTAAFRAADLGLDVVMVERYAEIGGVCLNVGCIPSKALLHAGQVIEEAE  175
            +LLV+G+G+GGY AA+RAA+LG  VV+V++ AE+GGVCLN GCIPSKAL+ A++ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  176  AFAEHGITF-GKPRIDLKKLASYKDGVVGKLTGGLKQLAKQRKVRVVHGTGQFSSANTLT  234
                 G+   G  ++D+  +   KDG+V KLT+G++ L K   V V+ G + ++ A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  VEGKDGTQVIGFEQAIIAAGSQAVKLPGFPWDDERVMDSTDALMLKDVPKRllvvgggii  294
            +   D  Q++++ + I+A GS +V L + P D+ R++ ST+AL L++VP++L+VVGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  295  glEMACVYDALGAKVTVCELSNELMPGADRDLVRPLEKRIKGRYEAIYTGTKVARAEATR  354
            GLE++  Y  +GAKVT+ E S+ +++G+D  L + + +++K    ++ T++ V  +E T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  355  QGIKVSFEGGKAPETDTFDRVLVAVGRSPNGKKINAEAAGVQVDERGFINVDKQQRTNVA  414
            + ++V  + +   E    D  LV++GR PN  KI  E  GV +D++GFI+++++ +TN+ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  415  HIFAIGDIVGQPMLahkaahegkvaaevaagekSHFDARAIPSVAYTHPEVAWMGITETE  474
            H++AIGD  G  +LAHKA+ E+K+AAEV +G++S +D +A+P V +++PEVA  G+TE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  475  AKAQGIEYTKGVFPWAASGRAISVGGDSGLTKLLFDEHG-RVMGAGIVGPNAGELIGETV  533
            AK +G E   + FP  A++RA+SV++  G+ +++ + +  RV+G  +VGP+ + LI+E+V
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  534  LALEMGADMEDIGLTVHPHPTLSETICFAAEVAHGSVTDIMAPKR  578
            +A+E GA+ ED++LT+H+HPTL+E +  AAE   G  T+++  K+
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNKKQ  504

807) Halsa_0788 in NC_014654


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  238 bits (889),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 191/465 (42%), Positives = 312/465 (68%), Gaps = 4/465 (0%)

Query  4    KY-DIAIVGSGPGGYVAAIRAGQMGAKTVLIEKEVLGGTCLNWGCIPTKAFVRSAELFAD  62
            KY D+ ++G+G+GGYVAAIRA+Q+G K VL++K  LGG CLN+GCIP+KA++ ++E   +
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKH  97

Query  63   IKEAESFGIKVEGA-EVDFPAVVKRKDKIVKRLVAGIDHLLKKNGVERIEGKASFIDKNY  121
            IK+A++ G+KV G  +VD P VVK+KD IV++L  GI  LLK NGVE I G A + + + 
Sbjct  98   IKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  122  LKV-VGKKttaieaeniiiatGSVPSKLPIAGADLAGILSSRDVLDLKELPESMiivggg  180
             K+ +      +   ++I+A GS+P  L     D   I+SS + L+L+E+P+ +++VGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  181  iigMEFAFIFQNFGVDVTVVEYLDQLVTGVDTEIAKELNRSAKRRKISVKTGAEVKEIKE  240
             IG+E++  + +FG  VT++E  D +++G D  ++K ++R  K   I+V T+A V+   +
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  241  TAAGYEVIFEQKGKAKSIEGEKVLMAVGRRPYHEGLKTANAGVEISEKRGAIVVNNKLET  300
            T+   +V  +  GK   I+ +  L+++GR+P    +   N GV + + +G I +NNK +T
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGV-VLDDQGFIKINNKCQT  336

Query  301  NVEGIYAVGDVTDKVLLAHVASHQGVIAVENIMGHDKEIDYTAVPGAIFTSPEIGTVGLT  360
            N+E +YA+GD ++  LLAH AS ++ IA E I G++  ID+ A+P  IF+ PE++  GLT
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  361  EEEAREKGIDYKVGAFPFAASGKVLAMGEREGKVKIIAEKETgkiiggaiigiEASDLIA  420
            E EA+EKG +   + FPF A+++ L++++ +G V+++AEK+T +++G  ++G E S LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  421  ELTLAVNLGLKAEDLIETIHAHPTTAEVIHEAALGLKDGPIHFMS  465
            E  +A++ G +AEDL  TIHAHPT +E + EAA G+ + + H ++
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLN  501

808) Fluta_2255 in NC_015321


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  238 bits (886),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 189/453 (42%), Positives = 308/453 (68%), Gaps = 5/453 (1%)

Query  5    DVAIIGSGPGGYVAALRCAQLGLNTALIEKYPTLGGTCLNVGCIPSKALLDSSEHFFNAK  64
            D+ +IG+G+GGYVAA+R AQLG +  L++K + LGG CLN GCIPSKAL+ +SE+  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFATHGIKVD-NVEADITQMIARKEEVITQTCNGIKFLMDKNKVTVYQGVGSFVDKTTI  123
            H   T G+KV  +V+ D+ +++ +K+ ++ +  +GI+ L+  N V V  G  +++  + I
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  124  AIKDEKGNStnitakntiiatGSKPNFFPGMEPDKKRIITSTEALKMTEIPKRMiviggg  183
            A     ++   ++ K+ I+A GS P  + +M  D+KRII+STEAL++ E+P++++V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  vigLELGSVYARLGTEVDVVEFAPTILPTMDLSLGKELTKILKKEGFKFHLEHKVQKVEN  243
             IGLELG+ YA++G+ V ++E + TIL+  D  L K + + LK  G+    +  VQ  EN
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  TGKGVKLTALNKKNEEVTLEADYCLVAVGRKAYTEGLGLENIGLTANNRGQIDVNDHLQT  303
            TG  V++      +EE+ ++ DYCLV++GRK+ T  +GLENIG+  +++G I +N+  QT
Sbjct  278  TGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  SVPNIYAIGDVVRGAMLAHKAEEEGVVVAEQLAGQKPHINYNLIPGVVYTWPEIASVGKT  363
            ++ ++YAIGD   G +LAHKA  E+ + AE ++GQ++ I+++ +P V+++ PE+A  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEELKAAGVEYKAGSFPMKALGRARASMDITGFVKVLADAKTDEVLGVHMIAARAADMIM  423
            E E K  G E  ++ FP +A +RA +  D  GFV+V+A+ +T  VLGV+M+++  + +I 
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  424  EAVTAMEFRASAEDISRICHAHPTFSEAIKEAA  456
            EAV A+E  A+AED+S   HAHPT++E++ EAA
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

809) Acry_1621 in NC_009484


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  238 bits (886),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 187/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  6    DVIVIGAGPGGYVCAIRAAQLGMKVACVEKRATLGGTCLNVGCIPSKALLQSSENYHELL  65
            D++VIGAG+GGYV AIRAAQLG KV  V+K A LGG CLN GCIPSKAL+ +SE   ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HGFARHGVSAENVSFDLGKMMGHKDEVVGANTKGVEFLFKKNKVTWLKGAASFKSAN--T  123
            H+ +     + +V  D+  ++  KD +V   T G+  L+K N V  + G A +  A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  124  IVVDGKE--YGARHIVIATGSESVPLPGVEVDETQIVTSTGAIALESVPKHLVVIGGGYI  181
            I +++ E  ++ +++++A GS +V L ++  D+ +I++ST A+ L+ VP+HLVV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  182  GLELGSVWRRLGAEVTVVEFLDRLVPTMDGEVATAFQKTLGKLGMKFKLGTKVTGAAKTA  241
            GLELG+   ++GA VT++E  D +++  D  ++ + ++ L  +G+    ++ V G+ +T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  242  KGVTLTLEPAKGGAAETLEADVVLVAIGRRAHTEGLGLDAVGVATDERGRVKTNGHYATS  301
              V + ++   +G  E ++ D  LV+IGR+++T  +GL+ +GV  D++G +K N    T+
Sbjct  280  DEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  302  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYGAIPGVVYTWPEVASVGKTE  361
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + +++ A+P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  362  EELKAEGVAYKVGKFPFTANGRARAMGDTDGFVkllsdkttdkllGAHIIGPDAGTIIAE  421
             E K  G     ++FPF AN+RA +++D+DGFV+++++K T ++LG +++GP+ +++IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  422  LVLAIEFGASAEDVARTSHAHPSLNEAVKEAALAVDGRALHI  463
             V+AIE GA+AED++ T HAHP+L E++ EAA +V G+A H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

810) lpd in NC_015186


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  238 bits (886),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 187/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  6    DVIVIGAGPGGYVCAIRAAQLGMKVACVEKRATLGGTCLNVGCIPSKALLQSSENYHELL  65
            D++VIGAG+GGYV AIRAAQLG KV  V+K A LGG CLN GCIPSKAL+ +SE   ++ 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HGFARHGVSAENVSFDLGKMMGHKDEVVGANTKGVEFLFKKNKVTWLKGAASFKSAN--T  123
            H+ +     + +V  D+  ++  KD +V   T G+  L+K N V  + G A +  A+   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  124  IVVDGKE--YGARHIVIATGSESVPLPGVEVDETQIVTSTGAIALESVPKHLVVIGGGYI  181
            I +++ E  ++ +++++A GS +V L ++  D+ +I++ST A+ L+ VP+HLVV+GGGYI
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  182  GLELGSVWRRLGAEVTVVEFLDRLVPTMDGEVATAFQKTLGKLGMKFKLGTKVTGAAKTA  241
            GLELG+   ++GA VT++E  D +++  D  ++ + ++ L  +G+    ++ V G+ +T+
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  242  KGVTLTLEPAKGGAAETLEADVVLVAIGRRAHTEGLGLDAVGVATDERGRVKTNGHYATS  301
              V + ++   +G  E ++ D  LV+IGR+++T  +GL+ +GV  D++G +K N    T+
Sbjct  280  DEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  302  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYGAIPGVVYTWPEVASVGKTE  361
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + +++ A+P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  362  EELKAEGVAYKVGKFPFTANGRARAMGDTDGFVkllsdkttdkllGAHIIGPDAGTIIAE  421
             E K  G     ++FPF AN+RA +++D+DGFV+++++K T ++LG +++GP+ +++IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  422  LVLAIEFGASAEDVARTSHAHPSLNEAVKEAALAVDGRALHI  463
             V+AIE GA+AED++ T HAHP+L E++ EAA +V G+A H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

811) lpda3 in NC_016812


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  238 bits (886),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 192/466 (42%), Positives = 314/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHHAA  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K +  GG CLN GCIPSKAL+ ASE   H  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLDALGVEVASP-KLNLQKMLAHKDATVKANVDGVSFLFKKNKIDGFQGTGKVLGQGKV  122
            H+ +++G+ V++  ++++  ++  KD+ V+   DG+  L+K N ++ + G +  L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHI  157

Query  123  SVTNDKGEEQVLEAKNIVIATGSDVAGIPGVEVEFDEKVIISSTGALELEKVPASMvvvg  182
            +  +  +EEQ++  K++++A GS    + ++   FD+K IISST AL+L+ VP  +VVVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMP--FDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggviglelgsvWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLAKQGIDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSAGGAKVTFEPVKGGEASTLEAEVVLIATGRKPCTDNMGLAKAGVVLDSRGRVEIDHH  302
             ++++  +V  +   +G    ++ +  L++ GRKP T+++GL + GVVLD +G + I++ 
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGIAYKVGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALSTFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

812) Halsa_0178 in NC_014654


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 183/449 (41%), Positives = 303/449 (68%), Gaps = 11/449 (2%)

Query  16   YVAAIRAAQLGLKTAVIEKDVVGGTCLNRGCIPTKAYLKHTELIHELKRMDEFGIMVDG-  74
            YVAAIRAAQLG K  +++K  +GG CLNRGCIP+KA +  +E + ++K+ +  G+ V G 
Sbjct  52   YVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKHANTMGLKVSGE  111

Query  75   YSLDWKKMRERKNKVVSKLTGGIRGLFKKNGVDLIKGMGEVINEHEIKITGEKDSKIWV-  133
              +D   +  +K+ +V+KLT+GIR L+K NGV++I G + + + H  KI  E + +I   
Sbjct  112  VQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSY  171

Query  134  ENIIIATGSAPIMPGLKGIDLPD--VISSKEALDLDELPERiviigggvigvEMASIYSS  191
             ++I+A GS P+   LK++ + +  +ISS EAL+L+E+P+++V++GGG IG+E+++ Y+ 
Sbjct  172  KDLILAIGSLPV--ELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAK  229

Query  192  LEVDVTIVEILDDILINFDKEMVKILKKSLKKHGVKLMTSSKVTEIAEQDDELIVKIESE  251
            +   VTI+E  D IL   D  + K +K+ LK  G+ ++T + V    + +DE+ V ++ +
Sbjct  230  FGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQVD  289

Query  252  -KADQIATDKVLAAVGRKPVFS--GIENLNLE-RENGFIKVDAHMETSTAGIYAVGDVTG  307
             K + I  D  L ++GRKP  +  G+EN+ +   ++GFIK++   +T+   +YA+GD +G
Sbjct  290  GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAG  349

Query  308  GMLLAHEASAEGIVAVKNIVGEQELRD-NLIPNCVYSLPEIASVGMTEAEAKKEGYEIKV  366
            G LLAH AS E+ +A   I G++ + D + +P  ++S PE+A  G+TE EAK  GYE   
Sbjct  350  GDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVS  409

Query  367  GRFPFMASGKAIAIGSEEGFVKIIADKKWDQILGAQIIGPHATDLiaeaaiaiKLESTAE  426
            +RFPF A+++A++++  +GFV+++A+K+  ++LG Q++GP+ + LIAEA +AI   + AE
Sbjct  410  SRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAE  469

Query  427  ILANTIHAHPTLSESVMEAAEDVNDLAVH  455
             L+ TIHAHPTL+E++MEAAE+V + A H
Sbjct  470  DLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

813) MICA_663 in NC_016026


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  236 bits (881),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 199/465 (43%), Positives = 311/465 (67%), Gaps = 13/465 (2%)

Query  8    DVIVIGSGPGGYVCAIRCAQLGLKTACVEKRDTLGGTCLNVGCIPSKALLQASEKFHEAE  67
            D++VIG+G+GGYV AIR AQLG K   V+K + LGG CLN GCIPSKAL+ ASE+  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  68   HALAAFGVKV-GKPELDLPTMMKHKDAVVESNTKGVEFLFKKNKID------WLkgegkv  120
            HA  + G+KV G  ++D+P ++K KD++V+  T G+  L+K N ++       L      
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  121  aaagvvevagkTYNAKNIVIATGSDVASLPGITIDEKRIVSSTGAIALESVPKHlvvigg  180
                  E    +Y  K++++A GS    L ++ +D+KRI+SST A+ L+ VP+HLVV+GG
Sbjct  159  KIKIEDEEQIFSY--KDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  181  gviglelgAVWGRLGAKVTVVEYLDRILPTMDGDLSKEAKKIFGKQGMEFKLSSKVTSVK  240
            G IGLELG+  +++GAKVT++E  D IL+  D  L+K  K+ +   G+     + V +  
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  241  DNGKGVTLSVEPAAGGAAETIEADIVLVAVGRKAYTDGLGLDAVGVERDERGRVKTDAHF  300
            + G  V + V+   +G  E I+ D  LV++GRK+ T+ +GL+ +GV  D++G +K +   
Sbjct  277  NTGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  301  QSNVKGIFAIGDVIAGPMLAHKAEDEGVILAEMIAGQTGHIDYNLVPSVVYTWPEVASVG  360
            Q+N+  ++AIGD  +G +LAHKA  E+ I AE+I+GQ + ID++ +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  361  QTEDQVKAANAQYKVGKFPFSANGRARAMNATEGFVKIIADAKTDRVLGVHIIGPEAGTL  420
             TE + K    +   ++FPF AN+RA +++ ++GFV+++A+ +T RVLGV+++GPE ++L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  421  IAEAVIAMEFGASAEDIARTCHAHPTleeavkeaalavDGRPLHM  465
            IAEAV+A+E GA+AED++ T HAHPTL E++ EAA +V G++ HM
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

814) GbCGDNIH1_2066 in NC_008343


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  236 bits (881),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 191/463 (42%), Positives = 310/463 (67%), Gaps = 9/463 (1%)

Query  6    DLIVIGAGPGGYVCAVRAAQLGLKVACVEKRETLGGTCLNIGCIPSKALLQSSENYHALL  65
            DL+VIGAG+GGYV A+RAAQLG KV  V+K E LGG CLN GCIPSKAL+ +SE    + 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HQFAEHGIQAK-DVALDLDRMQARKAEVVSANVKGIEFLFRKNGVTWLKGAASISAPG--  122
            H     G++   +V +D+  +  +K  +V+    GI  L++ NGV  + G A ++ +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  --KVEVGGQSYDARHIVIATGSESVPLPGVPVDEVRIVTSTGALSLPAVPKHlvvigggv  180
              K+E   Q +  +++++A GS +V L ++P D+ RI++ST AL L  VP+HLVV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  181  iglelgSVWRRLGAEVTVIEYLDRIVPGMDQEVAKAFQRILEKQGLAFRLGTKVTGAQVD  240
            IGLELG+   ++GA VT++E  D I++G D  ++K+ +R L   G++   ++ V G++  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  241  EGGVTLTLEPAKGGETDTLQADIVLVAIGRRPYLDGLGLDDIGVVRDERGRVRTDAHFAT  300
             + V + ++   +G  + +Q D  LV+IGR+P  + +GL++IGVV D++G ++ +    T
Sbjct  279  GDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  301  NIDGLYAIGDAIAGPMLAHKAEDEGVALAEMLAGQAGHVNYDVIPAVVYTWPEVASLGRT  360
            NI+ +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  361  EEELKAAGIAYKVGKFPFTANGRARAMGDTDGFVKILADARTDRLLGAHILGPDAGTLIA  420
            E E K  G     ++FPF AN+RA +++D+DGFV+++A+  T R+LG +++GP+ ++LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  421  ELATAMEFGASSEDVARICHAHPSLSEAVKEAALAVDGRAIHI  463
            E   A+E GA++ED++   HAHP+L+E++ EAA +V G+A H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

815) lpdA in NC_010118


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  236 bits (882),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 185/457 (41%), Positives = 308/457 (68%), Gaps = 9/457 (1%)

Query  2    NYYDVVVIGSGPGGYISAIRCSQLGFNTAIIEKYKYFGGTCLNVGCIPSKTLLSSAENYH  61
            +Y D++VIG+G+GGY++AIR +QLG +  +++K   +GG CLN GCIPSK+L+S++E   
Sbjct  38   KYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVK  96

Query  62   KAKNMFYKHGIKF-DNLLLDFTKMMSiknniinkiCEGIKYLFIKYNIKTYLGTASFKDK  120
              K+     G+K  +++ +D   ++  K+ I+NK+ +GI+ L+    +    G A + + 
Sbjct  97   HIKHA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  121  NTISI-LDSKIEIIKFTYAIIATGSKPMELPFAKIDGNKIISSTDILSLNYIPKKLSiig  179
            +   I ++   +I+ +   I+A GS P+EL    +D ++IISST+ L L+ +P+ L ++G
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVG  215

Query  180  ggvigiELGSLYNKIGSDVTIIEYEKNIISNLDLDLSKELKNILKKNGIKFYLSTKVESI  239
            GG IG+ELG+ Y K+G+ VTI+E    I+S  D  L+K +K  LK  GI     + V++ 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  240  DIIKSNVKINAKIKKNDEINIICDCCLLSIGRIPYTNNLGLENIGIKKDKKGFILVNNNL  299
            +    +V+++ ++  ++EI I CD CL+SIGR P T ++GLENIG+  D +GFI +NN+ 
Sbjct  276  ENTGDEVNVHVQVDGKEEI-IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  QTNIENIYAIGDVIGGLMLAHKAEKEGIFVSDKIYGNKNFINYNLIPSVIYTNPEVASVG  359
            QTNIE++YAIGD  GG +LAHKA  E+ + ++ I G+++ I+++ +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  KSEKELKYFNIKYKI--GKFPIKALGRAISSGEINGFVKILSDELTDEILGIHMIGPRVS  417
             +EKE K  +  Y    ++FP++A +RA+S ++ +GFV+++++  T  +LG++M+GP VS
Sbjct  395  LTEKEAK--EKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  418  DIIIEAVLAMEFKASSEDLSLISYAHPTFTEAVKEAA  454
             +I EAV+A+E  A++EDLSL   AHPT+ E++ EAA
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

816) lpdA1 in NC_012587


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  236 bits (879),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 192/466 (42%), Positives = 313/466 (68%), Gaps = 8/466 (1%)

Query  4    DLIVIGSGPGGYVCAIKAAQLGMKVAVIEKRSTYGGTCLNVGCIPSKALLHASEMFHHAA  63
            DL+VIG+G+GGYV AI+AAQLG KV +++K +  GG CLN GCIPSKAL+ ASE   H  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGLDALGVEVASP-KLNLQKMLAHKDATVKANVDGVAFLFKKNKIDGFQGIGKVLGQGKV  122
            H+ +++G+ V++  ++++  ++  KD+ V+   DG+  L+K N ++ + G    L ++ +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  123  SVTNDKGEEQVLEAKNIVIATGSDVAGIPGVEVEFDEKVIISSTGALELEKVPASMvvvg  182
            +  +  +EEQ++  K++++A GS    + ++   FD+K IISST AL+L+ VP  +VVVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMP--FDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggviglelgsvWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLAKQGIDFKLGAKVTGV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K ++R L   GI    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  VKSAGGAKVTFEPVKGGDASTLEAEVVLVATGRKPCTDNMGLAKAGVVLDSRGRVEIDHH  302
             ++++  +V  +   +G    ++ +  LV+ GRKP T+++GL + GVVLD +G + I++ 
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASV  362
             QT+I  VYAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKVGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++ ++DGFV+++A+K+T RVLG +++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

817) lpd2 in NC_017538


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (877),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 185/447 (42%), Positives = 297/447 (67%), Gaps = 10/447 (2%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNPTFGGTCLNVGCIPSKALLHASERFEEAA  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K + +GG CLN GCIPSKAL+ ASER  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HMLPKMGVGV-GTPTLDLAALMkfkddgvdgnvkgvgYLFKKNKIETFTGLGRIIGTGKV  123
            H    MG+ V G   +D++ ++K KD+ V+    G+  L+K N +E ++G + +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  EVKGADGKTETLETKNIVIATGSDVAKLKGVEIDEARIVSSTGALKLDKVPENLVVIGAG  183
             +K  ++  + +  K++++A GS    LK++ +D+ RI+SST AL+L+ VP++LVV+G+G
Sbjct  159  KIK-IEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAKVTVVEFLDRIIPGMDGEIAKSFQRILEKQGFAFKLGSKVTGVDS  243
             IGLELG+   ++GAKVT++E  D I++G D  ++K+ +R L   G++   ++ V G ++
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGKTLKVQVEPVAGGNGETLEADVVLVATGRVPYTDGLGLKEAGVELDQRGRIKTDAHLS  303
            +G  ++V+V+   +G+ E ++ D  LV+ GR P T+ +GL + GV LD++G IK +    
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TNVKGIYAIGDVIAGPMLAHKAEDEGVAVAETLVGQAGHTNYDVIPSVIYTFPEVASVGK  363
            TN+  +YAIGD  +G +LAHKA  E+   AE + GQ +  +++ +P VI++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKQAGVVYNV--GKFPFTANGRTKVNQTTDGFVKILADAKTDRVLGAHIIGAEAGE  421
            TE E K+ G  Y+   ++FPF AN+R+     +DGFV+++A+ +T RVLG +++G+E + 
Sbjct  396  TEKEAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  422  MIHECAVLMEFGGAAEDLARTCHAHPT  448
            +I E    +E G+ AEDL+ T HAHPT
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPT  480

818) lpdA in NC_011386


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (877),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 185/447 (42%), Positives = 297/447 (67%), Gaps = 10/447 (2%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNPTFGGTCLNVGCIPSKALLHASERFEEAA  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K + +GG CLN GCIPSKAL+ ASER  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HMLPKMGVGV-GTPTLDLAALMkfkddgvdgnvkgvgYLFKKNKIETFTGLGRIIGTGKV  123
            H    MG+ V G   +D++ ++K KD+ V+    G+  L+K N +E ++G + +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  EVKGADGKTETLETKNIVIATGSDVAKLKGVEIDEARIVSSTGALKLDKVPENLVVIGAG  183
             +K  ++  + +  K++++A GS    LK++ +D+ RI+SST AL+L+ VP++LVV+G+G
Sbjct  159  KIK-IEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAKVTVVEFLDRIIPGMDGEIAKSFQRILEKQGFAFKLGSKVTGVDS  243
             IGLELG+   ++GAKVT++E  D I++G D  ++K+ +R L   G++   ++ V G ++
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGKTLKVQVEPVAGGNGETLEADVVLVATGRVPYTDGLGLKEAGVELDQRGRIKTDAHLS  303
            +G  ++V+V+   +G+ E ++ D  LV+ GR P T+ +GL + GV LD++G IK +    
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TNVKGIYAIGDVIAGPMLAHKAEDEGVAVAETLVGQAGHTNYDVIPSVIYTFPEVASVGK  363
            TN+  +YAIGD  +G +LAHKA  E+   AE + GQ +  +++ +P VI++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKQAGVVYNV--GKFPFTANGRTKVNQTTDGFVKILADAKTDRVLGAHIIGAEAGE  421
            TE E K+ G  Y+   ++FPF AN+R+     +DGFV+++A+ +T RVLG +++G+E + 
Sbjct  396  TEKEAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  422  MIHECAVLMEFGGAAEDLARTCHAHPT  448
            +I E    +E G+ AEDL+ T HAHPT
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPT  480

819) lpd2 in NC_015684


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (877),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 185/447 (42%), Positives = 297/447 (67%), Gaps = 10/447 (2%)

Query  5    DLVVIGTGPGGYVCAIRAAQLGMKVAVVEKNPTFGGTCLNVGCIPSKALLHASERFEEAA  64
            DL+VIG+G+GGYV AIRAAQLG KV +V+K + +GG CLN GCIPSKAL+ ASER  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HMLPKMGVGV-GTPTLDLAALMkfkddgvdgnvkgvgYLFKKNKIETFTGLGRIIGTGKV  123
            H    MG+ V G   +D++ ++K KD+ V+    G+  L+K N +E ++G + +  +   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  EVKGADGKTETLETKNIVIATGSDVAKLKGVEIDEARIVSSTGALKLDKVPENLVVIGAG  183
             +K  ++  + +  K++++A GS    LK++ +D+ RI+SST AL+L+ VP++LVV+G+G
Sbjct  159  KIK-IEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGAKVTVVEFLDRIIPGMDGEIAKSFQRILEKQGFAFKLGSKVTGVDS  243
             IGLELG+   ++GAKVT++E  D I++G D  ++K+ +R L   G++   ++ V G ++
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  SGKTLKVQVEPVAGGNGETLEADVVLVATGRVPYTDGLGLKEAGVELDQRGRIKTDAHLS  303
            +G  ++V+V+   +G+ E ++ D  LV+ GR P T+ +GL + GV LD++G IK +    
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TNVKGIYAIGDVIAGPMLAHKAEDEGVAVAETLVGQAGHTNYDVIPSVIYTFPEVASVGK  363
            TN+  +YAIGD  +G +LAHKA  E+   AE + GQ +  +++ +P VI++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKQAGVVYNV--GKFPFTANGRTKVNQTTDGFVKILADAKTDRVLGAHIIGAEAGE  421
            TE E K+ G  Y+   ++FPF AN+R+     +DGFV+++A+ +T RVLG +++G+E + 
Sbjct  396  TEKEAKEKG--YETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  422  MIHECAVLMEFGGAAEDLARTCHAHPT  448
            +I E    +E G+ AEDL+ T HAHPT
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPT  480

820) Krodi_2977 in NC_015496


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (877),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 193/443 (44%), Positives = 300/443 (68%), Gaps = 5/443 (1%)

Query  5    DVAVIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYEDAI  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++  + I
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   KHFEDHGIDV-GEVSLNLEKMISRKQGVVDTTTKGIEFLMGKNNIDVYQGVGSFKDATHI  123
            KH +  G+ V GEV +++  ++ +K+G+V+  T GI  L+  N ++V  G + + +A   
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  NIAGEKNETI-EAKNTIIATGSKPSTLPFITLDKERIITSTEALKLPEVPKHlvvigggv  182
            +I  E +E I   K+ I+A GS P  L  + +D+ RII+STEAL+L EVP+HLVV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  183  iglelgQVYKRLGAEVTVVEYMDRIIPTMDSAQSKELLKVFKKQKMKFALSHGVTAVERN  242
            IGLELG  Y ++GA VT++E  D I++  D+  +K + + +K   +       V + E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  243  GDEVTVKATDKKGQEVEFKADYVLVAVGRHAYTDGLNLDAVGIKTDERGKVEVNEHLQTN  302
            GDEV V   +  G+E  ++ DY LV++GR + T+ + L+ +G+  D++G + +N+  QTN
Sbjct  279  GDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  303  VSNIYAIGDVIKGAMLAHKAEEEGTLVAEIMAGQKPHIDYNLIPGVVYTWPEVASVGKTE  362
            + ++YAIGD   G +LAHKA  E+ + AE+++GQ++ ID++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  363  EQLKEAGVAYKSGQFPMRALGRSRASGDTDGFVKILADKTTDEVLGVHMVGARVADLIAE  422
             + KE G    S++FP +A +R+ + +D+DGFV+++A+K T  VLGV+MVG+ V+ LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  423  AVTAMEFRASAEDIARMSHAHPT  445
            AV A+E  A+AED++   HAHPT
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPT  480

821) lpdA in NC_011989


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (876),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 195/466 (42%), Positives = 316/466 (68%), Gaps = 8/466 (1%)

Query  4    DLVVIGSGPGGYVCAIKAAQLGMKVAVVEKRATYGGTCLNIGCIPSKALLHASEMFHHAA  63
            DL+VIG+G+GGYV AI+AAQLG KV +V+K A  GG CLN GCIPSKAL+ ASE   H  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGMAELGVDVSAPV-LNLPKMMAHKDATVKANVEGVSFLFKKNKIDGVIGTGKIVAAGKV  122
            H+   +G+ VS+ V +++P ++  KD+ V+   +G+  L+K N ++ VI+    ++ + +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYLTEAHI  157

Query  123  SVTNDKGEEQILETKNIVIATGSDVAGIPGVAVDIDEKIIVSSTGGIALDkvpgkmivvg  182
            +  +  +EEQI+  K++++A GS    + +++  +D+K I+SST ++ L+ VP  ++VVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMP--FDQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggviglelgsvWARLGAKVTVVEYLDTILGGMDGEVSKQFQRMLVKQGMEFNLGAKVTAV  242
            GG IGLELG+  A++GAKVT++E  DTIL+G D  ++K  +R L   G+    +A V + 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  EKTGTGAKVTFEPAKGGEATVLEADVVLIATGRKPYTTGLGLEDVGVALDNRGRVEIDNH  302
            E+TG   +V  +   +G   +++ D  L++ GRKP T  +GLE++GV LD++G + I+N 
Sbjct  276  ENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FKTNVAGIYAIGDVVKGPMLAHKAEDEGVALAEILSGQHGHVNYDVIPGVVYTQPEVASV  362
             +TN+  +YAIGD   G +LAHKA  E+   AE++SGQ++ ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGVAYKVGKFPFTANGRARAMLATDGFVKVLADKETDRVLGVHIIGLGAGE  422
            G TE E K  G     ++FPF AN+RA ++  +DGFV+V+A+K+T RVLGV+++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEAAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFAKPIHM  468
            +I EA   +E G+++EDL+ T HAHPT++E++ EAA +  + + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

822) Theos_0131 in NC_019386


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (876),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 190/461 (42%), Positives = 309/461 (68%), Gaps = 10/461 (2%)

Query  3    DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERVYEVK  62
            DLLVIGAG+GGYVAAIRAAQLG KV +V+K   LGG CL  GCIPSKAL+ ++ERV ++K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKA-ELGGVCLNRGCIPSKALISASERVKHIK  99

Query  63   KG-LLGLKVEG-FSLDLGALLAHKDKVVQANTQGIEFLFKKNGIARHLGTARFLSEK---  117
             +  +GLKV G   +D+  ++  KD +V+  T+GI  L+K NG+   ++   +L+E    
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYLTEAHIA  158

Query  118  KVEVAETGEVLEGRYILIATGSAPLIPPWAEVDYERVVTSTEALGFPEVPERFvvvgggv  177
            K+ + +  +++  + +++A GS P+       D  R+++STEAL + EVP+++VVVGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  178  iglelgvvWHRLGAKVTVLEYMDRILPTMDAELSRAAEKIFKKEGLEIRTG--VRVVRVA  235
            IGLELG    ++GAKVT+LE  D IL+  D+ L+++  + +K  G+ + T+  V+    +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  236  PEGKGARVELEG-GEALWADRVLVAVGRRPYTEGLGLEAAGLSPDERGRIPVDAHLRTKH  294
             +    +V+++G  E +  D  LV++GR+P T  +GLE  G+  D++G I ++   +T+ 
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  295  PHIYAIGDVVRGPMLAHKASEEGIAAVEHMATGVGHVDYLAIPSVVYTHPEVAGVGYTEE  354
             H+YAIGD   G +LAHKAS E+  A E ++   + +D+ A+P V++++PEVA  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  355  ELKAQGIPYKVGRFPYSASGRARAMGETEGFVKVLAHRDTDRILGVHGIGARVGDMLAEA  414
            E K +G     +RFP+ A++RA ++++++GFV+V+A+++T R+LGV+ +G+ V+ ++AEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  415  ALAIFFKASAEDLGRAPHAHPSLSETLKEAALAAWERPIHL  455
             +AI   A+AEDL+ + HAHP+L+E L EAA +   ++ H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

823) lpdA in NC_009446


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (878),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 181/448 (41%), Positives = 297/448 (67%), Gaps = 4/448 (0%)

Query  117  VDLVVIGAGPGGYSAAFRAADLGLKVTLIERYATLGGVCLNVGCIPSKALLHVAEIMEEA  176
            VDL+VIGAG+GGY AA+RAA+LG KV L+++ A LGGVCLN GCIPSKAL+  +E + + 
Sbjct  40   VDLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHI  98

Query  177  EWAKKAGVTFA-KPSVDLDALRTHKEGVIKKLTTGLAGMAKARKVTVIQGVAQFTGSHSI  235
              A+  G+  +    VD+  +   K+G+++KLT G+  + K+  V VI G A +T +H  
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  236  HIKTVDGEQNLNFKNCIIAAGSESVKLPFMPTDP-RVIDSTGALQLQDIPERLLVigggi  294
             IK  D EQ +++K+ I+A GS +V L  MP D  R+I ST ALQLQ++P++L+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  295  igLEMATVYHALGSKIDIVEMMDGLMAGADKDLVKVWQRRNPDLFEHIYLNTKTVAAEAK  354
            IGLE++T Y  +G+K+ I+E  D +++G+D  L K  +R+  ++   +  ++   ++E  
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  355  DDGIHVTFAGDKAPKEAQRYDRVLMAVGRRPNGKTLNVEACGVTVDERGFIPVDKQMRTN  414
            +D ++V    D +  E  + D  L+++GR+PN   + +E  GV +D++GFI ++++ +TN
Sbjct  279  GDEVNVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  415  QAHIFAIGDIVGQPMLahkavheahvaaenaaghqaFFDARVIPGVAYTSPEVAWVGVTE  474
              H++AIGD  G  +LAHKA  EA +AAE  +G+++ +D + +P V ++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  475  SQAAKENIAVEKAVFPWAASGRAIANGCDEGFVKLIVDKASQRVIGGAIVGPNAGDMIGE  534
             +A         + FP  A++RA++ +  +GFV+++ +K ++RV+G  +VGP+ + +I+E
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  535  IALAIEMNAVPADIALTIHPHPTLGETI  562
              +AIE  A + D++LTIH+HPTL E +
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPL  485

824) TM1040_3504 in NC_008043


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (875),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 189/456 (42%), Positives = 300/456 (66%), Gaps = 12/456 (2%)

Query  5    DVIVIGAGPGGYVSAIRCAQLGLKTAIVEGRETLGGTCLNVGCIPSKALLHATHMLHEAE  64
            D++VIGAG+GGYV+AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ A++ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFGAMGLKGKSP-SVDWNQMKSYKDEVIGQNTGGVEFLMKKNKIDWIKGWASIPEA--G  121
            H   +MGLK  +   VD  ++   KD ++ + T+G+  L+K N ++ I G A + EA  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDDTH--EAKNIIIASGSVPSALPGVEVDNDKGLVVDSTGALELPKVPKKMVVIGA  179
            K+K+ D+ +    K++I+A GS+P  L ++  D+ +  ++ ST AL+L  VP+ +VV+G+
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKR--IISSTEALQLQEVPNHLVVVGG  216

Query  180  GVIGLELGSVYARLGAEVTVVEYMDAVCPGMDKDVQRGFKRILEKQGLSFIMGAAVKGVE  239
            G IGLELG+ YA++GA VT++E  D++ +G D  + +  KR L   G++ I +A V+G E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  240  TTKSKAKVSYEPKKGGDAEVIEADVVLVATGRKPYAEGLGLDALGVKMTERGQIATDAQW  299
             T    +V  + + +G  E+I+ D  LV+ GRKP +  +GL+ +GV + ++G I  + + 
Sbjct  277  NTGDEVNV--HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  ATNVKGIYAIGDVIEGPMLAHKAEDEGMAVAEVIAGKHGHVNYGVIPGVVYTTPEVATVG  359
             TN+  +YAIGD   G +LAHKA  E+   AEVI+G+++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  ATEDALKAEGRKIKVGKFMFMGNARAKAVHQAEGGFVKLIADKETDRilgaaiigpgagd  419
             TE   K  G     ++F F +NARA +V +A+ GFV+++A+K+T R+LG  ++GP  + 
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDAD-GFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  420  liHEICVAMEFGASAEDLALTCHAHPTYSEAVREAA  455
            LI E   A+E GA+AEDL+LT HAHPT +E++ EAA
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

825) TTHA0233 in NC_006461


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  235 bits (875),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 216/470 (46%), Positives = 327/470 (70%), Gaps = 12/470 (2%)

Query  4    MKTY-DLIVIGTGPGGYHAAIRAAQLGLKVLaveagevggvCLNVGCIPTKallhaaetl  62
            +K Y DL+VIG+G+GGY AAIRAAQLG KV+ V+ +E+GGVCLN GCIP+KAL+ A+E +
Sbjct  36   VKKYVDLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERV  95

Query  63   hhlKVAEGFGLKAKPEL--DLKKLGGWRDQvvkkltggvgtllkgNGVELLRGFARLVGP  120
             H+K A+  GLK   E+  D+  +  W+D +V+KLT+G+ TLLKGNGVE++ G A L  +
Sbjct  96   KHIKHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEA  155

Query  121  K----EVEVGGERYGAKSLILATGSEPLELKGFPFGED-VWDSTRALKVEEGLPKRLLVI  175
                  +E   + ++ K LILA GS P+ELK+ PF++  +  ST AL+++E +P++L+V+
Sbjct  156  HIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVV  214

Query  176  GGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVG  235
            GGG +GLELG  Y ++GA VT++E    IL+  DP  +  ++R L   GI V T +   G
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  236  YEKKKDGLHVRLEPAeggegeevvvdkvlvavgRKPRTEGLGLEKAGVKVDERGFIRVNA  295
             E+  D ++V+++     E  +     V ++  RKP T  +GLE+ GV +D++GFI++N 
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIG--RKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  296  RMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAFDYQ-VPSVVYTSPEWAG  354
            + +T++  VYAIGD A   LLAHKA  E+ IAAE  +G++S +D+Q +P V+++ PE A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  355  VGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQag  414
             GLTE EAK  GY    ++FP+ A++RAL++++A+G V+VV++ +T  +LGV +VGP+ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  415  eliaeaalalemgaTLTDLALTVHPHPTLSESLMEAAEAFHKQAIHILNR  464
             LIAEA +A+E GA   DL+LT+H+HPTL+E+LMEAAE+   +A H+LN+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

826) lpd in NC_018286


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  234 bits (871),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 184/456 (41%), Positives = 301/456 (67%), Gaps = 12/456 (2%)

Query  5    DVIVIGAGPGGYVCAIRCAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHSTHLLHEAE  64
            D++VIGAG+GGYV AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ +++ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFAHMGLKGKSP-SVDWSQMKSYKEEVIGQNTGGIEFLFKKNKIDWIKGWASLSET--G  121
            H    MGLK  +   VD +++   K+ ++ + T+GI  L+K N ++ I G A L+E+  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVDDDTH--EAKNIVIASGSVPSSLPGVEVDNDKGIVVDSTGALDLPKIPKKMVVIGA  179
            K+K++D+ +    K++++A GS+P  L ++  D+ +  ++ ST AL+L  +P+ +VV+G+
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKR--IISSTEALQLQEVPNHLVVVGG  216

Query  180  GVIGLELGSVYARLGSDVTVVEYMDAVCPGMDKDVQRSFKRILEKQGLNFIMGAAVQEVE  239
            G IGLELG+ YA++G+ VT++E  D++ +G D  + ++ KR L   G+  I +A VQ  E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  240  TSKTKAKVKYQPKKGGDDEVIDTDVVLVATGRKPYAEGLGLDALGIKMTERGQIATDAHW  299
             +    +V  + + +G +E+I+ D  LV+ GRKP +  +GL+ +G+ + ++G I  +   
Sbjct  277  NTGDEVNV--HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  ATNVKGVYAIGDVIEGPMLAHKAEDEGMAVAEVIAGKHGHVNYGVIPGVVYTTPEVATVG  359
             TN+  VYAIGD   G +LAHKA  E+   AEVI+G+++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  QTEDALKAEGRKIKTGKFMFMGNARAKAVHQAEGGFVKLIADKETDRilgaaiigpgagd  419
             TE   K  G    +++F F +NARA +V +A+ GFV+++A+K+T R+LG  ++GP  + 
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDAD-GFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  420  liHEICVAMEFGASAEDLALTCHAHPTYSEAVREAA  455
            LI E   A+E GA+AEDL+LT HAHPT +E++ EAA
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

827) Rru_A1215 in NC_007643


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  234 bits (873),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 180/449 (41%), Positives = 296/449 (66%), Gaps = 5/449 (1%)

Query  19   AIRAAQLGLRVACVEKRPTLGGTCLNVGCIPSKALLQSSHLFDEANHGFAAHGITV-GTL  77
            AIRAAQLG +V  V+K + LGG CLN GCIPSKAL+ +S+   + +H+  + G+ V G +
Sbjct  55   AIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIKHA-NTMGLKVSGEV  112

Query  78   GLDMKTMMARKDEVVEANTKGIVFLFKKNKVTHVVGSARIagagqvvvsgeggeqTLTTR  137
             +DM  ++ +KD +V+  T GI  L+K N V  + G A ++ A    +  E+ EQ ++ +
Sbjct  113  QVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYK  172

Query  138  AIVIATGSEVTPLPGVTIDEERIVSSTGALALAKVPKSLVVIGAGVIGLELGSVWRRLGA  197
             +++A GS    L ++ +D+ RI+SST AL L  VP+ LVV+G+G IGLELG+   ++GA
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  198  EVTVVEYLDHILPPMDGEVRKQSQRILEKQGLRFKLGRKVTAAERKGEGVSLTVEPAKGG  257
             VT++E  D IL+  D  + K  +R L   G+    +  V ++E  G+ V++ V+   +G
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV--DG  290

Query  258  EAETLEAETVLVAVGRRPFTDGLGLEEVGVEKTDRGFVKVDGDFQTAIEGIFAIGDVIGG  317
              E ++ +  LV++GR+P T+ +GLE++GV   D+GF+K++   QT IE ++AIGD  GG
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  318  MMLAHKAEDEGMALAEMLAGESAHVNYGAIPSVVYTWPEIAGVGKTEEMLKKDGVAYKVG  377
             +LAHKA  E+   AE+++G+++ +++ A+P V+++ PE+A  G TE   K  G     +
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  378  KFPFTANARAKANGDTDGFVKILSNAETGRVLGCHIIGAQAGDLIMEVVLGMEFGASSED  437
            +FPF ANARA + +D+DGFV+++++ +T RVLG +++G++ + LI E V+++E GA++ED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  438  IARTCHAHPQLGEAVKEAALAVNKRTIHM  466
            ++ T HAHP L E++ EAA +V  ++ HM
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

828) F11_06290 in NC_017584


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  234 bits (873),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 180/449 (41%), Positives = 296/449 (66%), Gaps = 5/449 (1%)

Query  19   AIRAAQLGLRVACVEKRPTLGGTCLNVGCIPSKALLQSSHLFDEANHGFAAHGITV-GTL  77
            AIRAAQLG +V  V+K + LGG CLN GCIPSKAL+ +S+   + +H+  + G+ V G +
Sbjct  55   AIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIKHA-NTMGLKVSGEV  112

Query  78   GLDMKTMMARKDEVVEANTKGIVFLFKKNKVTHVVGSARIagagqvvvsgeggeqTLTTR  137
             +DM  ++ +KD +V+  T GI  L+K N V  + G A ++ A    +  E+ EQ ++ +
Sbjct  113  QVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYK  172

Query  138  AIVIATGSEVTPLPGVTIDEERIVSSTGALALAKVPKSLVVIGAGVIGLELGSVWRRLGA  197
             +++A GS    L ++ +D+ RI+SST AL L  VP+ LVV+G+G IGLELG+   ++GA
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  198  EVTVVEYLDHILPPMDGEVRKQSQRILEKQGLRFKLGRKVTAAERKGEGVSLTVEPAKGG  257
             VT++E  D IL+  D  + K  +R L   G+    +  V ++E  G+ V++ V+   +G
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV--DG  290

Query  258  EAETLEAETVLVAVGRRPFTDGLGLEEVGVEKTDRGFVKVDGDFQTAIEGIFAIGDVIGG  317
              E ++ +  LV++GR+P T+ +GLE++GV   D+GF+K++   QT IE ++AIGD  GG
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  318  MMLAHKAEDEGMALAEMLAGESAHVNYGAIPSVVYTWPEIAGVGKTEEMLKKDGVAYKVG  377
             +LAHKA  E+   AE+++G+++ +++ A+P V+++ PE+A  G TE   K  G     +
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  378  KFPFTANARAKANGDTDGFVKILSNAETGRVLGCHIIGAQAGDLIMEVVLGMEFGASSED  437
            +FPF ANARA + +D+DGFV+++++ +T RVLG +++G++ + LI E V+++E GA++ED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  438  IARTCHAHPQLGEAVKEAALAVNKRTIHM  466
            ++ T HAHP L E++ EAA +V  ++ HM
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

829) lpdA in NC_011420


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  233 bits (868),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 191/464 (42%), Positives = 320/464 (69%), Gaps = 6/464 (1%)

Query  7    DLVVIGSGPGGYVAAIRAAQLGLKTACVEMRDTLGGTCLNIGCIPSKALLTASEKYEEAK  66
            DL+VIG+G+GGYVAAIRAAQLG K   V+ +  LGG CLN GCIPSKAL++ASE+  + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   HGLGGFGVKVTG-VELDLPAMMAHKTRVVQSNVEGVQFLFKKNKVARFHGRGVIDAPGVV  125
            H+    G+KV+G V++D+P ++  K  +V+   +G++ L+K N V  + G + +  + + 
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  126  KVVKPDGAAETLTTKNILIATGSDVMPLPGVTIDEKRIVSSTGALDLDKVPgrlvviggg  185
            K+ K ++  + ++ K++++A GS  + L ++ +D+KRI+SST AL+L+ VP +LVV+GGG
Sbjct  159  KI-KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  186  viglelgSVWQRLGAQVTVVEFLDRILPGMDAEVSKHAQRILGKQGLSFKLGTKVTGARM  245
             IGLELG+   ++GA+VT++E  D IL+G D+ ++K  +R L   G++   ++ V G+  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  246  NAESVTLTLEPAKGGGETTLEADIVLVAIGRRPYTEGLGLETVGVALDSRGRIVTDHHFR  305
             ++ V + ++   +G E  ++ D  LV+IGR+P T  +GLE +GV LD +G I  ++  +
Sbjct  278  TGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  306  TNVPGIWAIGDVIAGPMLAHKaeeegvvaaevmagQSGHINYDAIPGVVYTWPEIAAVGR  365
            TN+  + AIGD  +G +LAHKA  E+ +AAEV++GQ++ I+++A+P V+++ PE+A  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  366  TEEQLKEAGIAYKVGKFPFTANGRARAMQVTEGFVKVLADARTDTLLGAHIIGANAGDMI  425
            TE + KE G     ++FPF AN+RA ++  ++GFV+V+A+  T  +LG +++G++ + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  426  EELALALEFGASSEDVARTSHAHPTLTEAIKEACLAVDGRPIHI  469
             E  +A+E GA++ED++ T HAHPTL E++ EA  +V G++ H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

830) HYPDE_39463 in NC_021172


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  233 bits (869),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 298/466 (64%), Gaps = 10/466 (2%)

Query  6    DLIVIGTGPGGYVCAIRAAQLGMKVAVVEKRGTHGGTCLNVGCIPSKALLHASHAYDEAK  65
            DL+VIG+G+GGYV AIRAAQLG KV +V+K +  GG CLN GCIPSKAL+ AS+   + K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HAFGAMG--IDASPVLDLPKMQAFKREGVKGNVEGVAYLLKKNKIDSYFGTGRVLKSGQV  123
            HA  +MG  + +   +D+P +   K   V+   +G+  LLK N ++  ++    L  +++
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEV-ISGEAYLTEAHI  157

Query  124  AVTLPGGETQTLEAKSIVIATGSDVARLPGIEIDEKRVVSSTGALELASVPRKLLVIGAG  183
            A     +E Q +  K +++A GS    L ++ +D+KR++SST AL+L  VP  L+V+G+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  VIGLELGSVWRRLGADVLVVEFFDRILPGIDKEIARSFQRLLEKQGIAFRLASKVTGVSK  243
             IGLELG+   ++GA V ++E  D IL+G D  ++++ +R L   GI+    + V G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG---  274

Query  244  PESPGKPLGIDIESAAGGVAEAIEADVVLVAVGRVPYTEGLGLAEAGVALDAKKRVLVDG  303
             E+ G  + ++++   +G  E I+ D  LV++GR P T  +GL + GV LD +  + ++ 
Sbjct  275  GENTGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  304  HFQTSASGIFAIGDVIAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPNVIYTSPEVAS  363
              QT+   ++AIGD  +G +LAHKA  E+   AE+I+GQ + ++++ +P VI++ PEVA 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  364  VGKSEEELKAAGIAYNVGKFPFTANGRAKSIRMTDGFVKILADAATDRVLGVHiiganag  423
             G +E E K  G     ++FPF AN+RA S+  +DGFV+++A+  T RVLGV+++G++ +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  424  eiiaeaCVLMEFGGSAEDLARTCHAHPTLTEAVKEAALAVGKRAIH  469
             +IAEA   +E G++AEDL+ T HAHPTL E++ EAA +V  +A H
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

831) CA2559_06220 in NC_014230


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  232 bits (866),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 188/444 (43%), Positives = 299/444 (68%), Gaps = 4/444 (0%)

Query  5    DVAVIGSGPGGYVAAIRCAQLGLKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYHDAV  64
            D+ VIG+G+GGYVAAIR AQLG K  +++K + LGG CLN GCIPSKAL+ +S++  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKH-I  98

Query  65   AHFEEHGIEISGDVKVNLEQMMSRKEKVVNQTCDGVKFLMDKNKIEVFQGVGSFKDTTHI  124
             H +  G+ +SG+V+V++ +++ +K+ +VN+  DG++ L+  N +EV+ G  ++   +HI
Sbjct  99   KHANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  125  NIEDSEGKTQTIEAAKTIIATGSKPSSLPFIDLDKERIITSTEALKLKEIPKHliviggg  184
                 E+  Q +     I+A GS P  L  + +D+ RII+STEAL+L+E+P+HL+V+GGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  185  viglelgqvYKRLGADVTVVEYMDRIIPTMDSACSKELTKILKKQKVKIATSHKVSAVTR  244
             IGLELG  Y ++GA VT++E  D I++  D+  +K + + LK   + + T   V +   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  DGDKITVKATDKKDKEVSFEGDYVLVSVGRKAYTDGLNLDAVKIKADDRGRVEVNEHLQT  304
             GD + V   +  +KE  ++ DY LVS+GRK+ T+ + L+ + +  DD+G + +N+  QT
Sbjct  278  TGDEVNVH-VQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  305  NVENIYAIGDVVKGAMLAHKAEEEGVFVAETIAGQKPHINYNLIPGVVYTWPEVAAVGKT  364
            N+E++YAIGD   G +LAHKA  E+ + AE I+GQ++ I+++ +P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  365  EEELKEEGIKYKSGQFPMRALGRSRASGDIDGMVKILADETTDEVLGVHMVGARVADLIA  424
            E E KE G    S++FP +A +R+ + +D DG V+++A+  T  VLGV+MVG+ V+ LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  425  EAVTAMEFRASAEDIARMSHAHPT  448
            EAV A+E  A+AED++   HAHPT
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPT  480

832) lpd2 in NC_018290


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  232 bits (866),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 186/456 (41%), Positives = 301/456 (67%), Gaps = 12/456 (2%)

Query  5    DVIVIGAGPGGYVCAIRCAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHSTHLLHEAE  64
            D++VIGAG+GGYV AIR AQLG K  +V+ +  LGG CLN GCIPSKAL+ +++ + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVD-KAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFAHMGLKGKSP-SVDWSQMKSYKEEVIGQNTGGIEFLFKKNKIDWIKGWASLSEA--G  121
            H    MGLK  +   VD +++   K+ ++ + T+GI  L+K N ++ I G A L+EA  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDDTH--EAKNIVIASGSVPSSLPGVEVDNDKGIVVDSTGALDLPKIPKKMVVIGA  179
            K+K+ D+ +    K++++A GS+P  L ++  D+ +  ++ ST AL+L  +P+ +VV+G+
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKR--IISSTEALQLQEVPNHLVVVGG  216

Query  180  GVIGLELGSVYARLGSDVTVVEYMDAVCPGMDKDVQRSFKRILEKQGLNFIMGAAVQEVE  239
            G IGLELG+ YA++G+ VT++E  D++ +G D  + ++ KR L   G+  I +A VQ  E
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  240  TSKTKAKVKYQPKKGGDEEVIDADVVLVATGRKPYAEGLGLDALGVKMTERGQIATDAHW  299
             +    +V  + + +G EE+I+ D  LV+ GRKP +  +GL+ +GV + ++G I  +   
Sbjct  277  NTGDEVNV--HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  ATNVNGVYAIGDVIEGPMLAHKAEDEGMAVAEVIADKHGHVNYGVIPGVVYTTPEVATVG  359
             TN++ VYAIGD   G +LAHKA  E+   AEVI+++++ +++  +P V+++ PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  QTEDALKAEGRKIKTGKFMFMGNARAKAVHQAEGGFVKLIADKETDRilgaaiigpgagd  419
             TE   K  G    +++F F +NARA +V +A+ GFV+++A+K+T R+LG  ++GP  + 
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDAD-GFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  420  liHEICVAMEFGASAEDLALTCHAHPTYSEAVREAA  455
            LI E   A+E GA+AEDL+LT HAHPT +E++ EAA
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

833) bfmBC in NC_013791


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  231 bits (863),  Expect = 6e-62, Method: Compositional matrix adjust.
 Identities = 190/469 (41%), Positives = 319/469 (69%), Gaps = 13/469 (2%)

Query  6    DLVVLGAGTGGYVAAIRAAQHGLKVAVVEKEKLGGTCLHKGCIPSKALLRSAEVFETAKR  65
            DL+V+GAG+GGYVAAIRAAQ G KV +V+K  LGG CL++GCIPSKAL+ ++E     K+
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADDFGVQ-TGEVSLDFTKVQNRKESIVDQLHRGVQHLMKKGKIDVFEGTGRILGPSIFSP  124
            A+  G++ +GEV +D   V ++K++IV++L  G++ L+K   ++V+ G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  TPGTISVEMANGDENMMLIPQNVIVATGSSPRTLPGLEIDGTHVLTSDEALQLETLPASi  184
              + I +E    DE+ ++  +++I+A GS P  L ++ +D  ++++S EALQL+ +P  +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  livgggvigiEWASMLHDFGVDVTVIEYGAQILPTEDKDiskeaakilkkkgikiVTNAK  244
            ++VGGG IG+E ++    FG  VT++E +  IL+  D  ++K   + LK  GI ++T+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDAL  271

Query  245  VMADTIEKGDSVSIKADVNGKEETFTAEKLLVSVGRTANVKDIGLENTDIQVEN-GVILV  303
            V ++  + GD V++  +V+GKEE +  +  LVS+GR +N   IGLEN ++ +++ G I +
Sbjct  272  VQGGE-NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  304  NEFYQTKESHIYAIGDVIGGLQLAHVASHEGIIAVDHIARKNPDPIDYDTVSKCIYSHPE  363
            N+  QT+  H+YAIGD  GG  LAH AS E+ IA + I+ +N+  ID+++++  I+S+PE
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDPE  389

Query  364  MASVGITEEEAKKRGHNVKIGQFPFKAIGKALVFGETDGFVKIIADADNDDVLGVHMIGP  423
            +A  G+TE EAK +G +   ++FPF+A ++AL  +++DGFV+++A+ +   VLGV+M+GP
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  424  HVTDMISEAALAKVLDAAHFEVAHTIHPHPTLSEVIGEAALAVEGKAIH  472
            +V+ +I+EA +A   +A   +++ TIH+HPTL+E + EAA +V G A H
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

834) Cpin_7124 in NC_013132


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  231 bits (861),  Expect = 8e-62, Method: Compositional matrix adjust.
 Identities = 183/454 (41%), Positives = 304/454 (67%), Gaps = 9/454 (1%)

Query  5    DIVVIGSGPGGYVAAIRAAQLGYKTAIIEKYSTLGGTCTNVGCIPTKALLDSTHHYHDAL  64
            D++VIG+G+GGYVAAIRAAQLG K  +++K + LGG C N GCIP+KAL+ ++++  +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HKFAVQGINLQG-IQLDFKQLYKRKSEVVTKNTQGLNYLMKKNKISVIQGLASFKDNSTL  123
            H  ++ G+++ G +Q+D  ++ K+K  +V K T+G+  L+K N + VI G A + +    
Sbjct  100  HANTM-GLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  QVRGQDGVSRTIQAGKYIIATGSKPATIPGVVLDKKRIITSTEALALEERPKTMviiggg  183
            +++ +D   + +     I+A GS P  + ++ +D+KRII+STEAL L+E P+ +V++GGG
Sbjct  159  KIKIEDE-EQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  vigvEMASIFSRIGTKVTILEYADRLIPTMDSESGITLQKLLTKEGIEILLQQSVFKTEN  243
             IG+E+++ ++++G+KVTILE +D +++  D+    T+++ L   GI ++ +  V   EN
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  TVDAAKVWYKDVAGQEQSLTADYVLVAVGRKAYTDNLGLENTQVQLNPRGMIVVNEVLQT  303
            T D  +V   +V G+E+ +  DY LV++GRK+ T+++GLEN  V L+ +G I +N+  QT
Sbjct  278  TGDEVNV-HVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  304  AVPNIYAIGDVIGGAMLAHKAEEEATFVVERIHGGNPHIHYDRIPSVVYSWPEVASVGAS  363
             + ++YAIGD  GG +LAHKA  EA +  E I G N+ I+++ +P V++S PEVA  G +
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  364  EEELKKKQVAYNV--GKFPFSANARARAGMDTEGFVKVLADPKYGEILGVHIVGARAADL  421
            E E K K  +Y+   ++FPF ANARA +  D++GFV+V+A+ +   +LGV++VG+  + L
Sbjct  397  EKEAKEK--GYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  422  IAQAVTAMEFEITVNEMGKISYAHPTYAEVLKEA  455
            IA+AV A+E     ++++    AHPT +E L EA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEA  488

835) amb3963 in NC_007626


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  230 bits (858),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 185/447 (42%), Positives = 294/447 (66%), Gaps = 6/447 (1%)

Query  23   RAAQLGLKTACIEKRGSLGGTCLNVGCIPSKALLTASHHYHAAAHELGSFGIKVA-KVEM  81
            RAAQLG K   ++K + LGG CLN GCIPSKAL++AS++     H   + G+KV+  V++
Sbjct  57   RAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIKHA-NTMGLKVSGEVQV  114

Query  82   DVAGMMGHKDKVVSDNTKGIEFLFKKNKVTYIVGAGAITAPGQIEVTAKDGAKSNVAAKH  141
            D++ ++  KD +V+  T GI  L+K N V  ++++ A  + ++I     ++     + K+
Sbjct  115  DMPEVVKWKDGIVNKLTDGIRTLLKGNGVE-VISGEAYLTEAHIAKIKIEDEEQIFSYKD  173

Query  142  IVIATGSDVTPLPGVEIDEEVIISSTGALALSKTPKHMvvigggvigLELGTVWGRLGAK  201
            +++A GS    L ++ +D+  IISST AL L   P+H+VV+GGG IGLELGT  +++GAK
Sbjct  174  LILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAK  233

Query  202  VTVVEFLDRILPFNDGEVSKQMQRLLAKQGMEFKLGTKVTGIAKKGKTATVTVEPAAGGA  261
            VT++E  D IL+  D  ++K ++R L   G+    ++ V G  + G    V V+   +G 
Sbjct  234  VTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQ--VDGK  291

Query  262  AEKIEADSVLVAIGRKPYTEGLGLDKVGVALDKRGFVQIDGHFRTNVPGIYAIGDVVGGA  321
             E I+ D  LV+IGRKP T  +GL+++GV LD +GF++I+   +TN+  +YAIGD  GG 
Sbjct  292  EEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGD  351

Query  322  MLAHKAEEEGVALAEILAGQHGHVNYEAIPAVVYTWPEVASVGKTEEQLKAEGIAYKAGK  381
            +LAHKA  E+   AE+++GQ++ ++++A+P V+++ PEVA  G TE + K  G    +++
Sbjct  352  LLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSR  411

Query  382  FPFTANGRARSMNEVDGFVKVLACATTDKVLGAHIVGPNAGDLIAEVVLAMEFGAASEDI  441
            FPF AN+RA S+++ DGFV+V+A   T +VLG ++VGP+ + LIAE V+A+E GA +ED+
Sbjct  412  FPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDL  471

Query  442  ARTCHAHPGLGEAVKEACLAVDGRPLH  468
            + T HAHP L E++ EA  +V G++ H
Sbjct  472  SLTIHAHPTLPEPLMEAAEGVMGHATH  498

836) A7A1_3637 in NC_019896


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  230 bits (857),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 174/433 (41%), Positives = 292/433 (68%), Gaps = 14/433 (3%)

Query  6    DVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTARE  65
            D++++G+G+GGYVAAIRAAQLG K  +V+K  LGG CL++GCIPSKAL+ ++E  +  ++
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  66   ADQFGVETAG-VSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSP  124
            A+  G+  +G V ++   V ++K+++V+KL+ G+  L+K   ++V +G + +  + I   
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI---  157

Query  125  LPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEADGKSVLTSDEALQMEELPQSi  184
              + I +E    +E++++  K++I+A GS P  L ++  D K +++S EALQ++E+P+ +
Sbjct  158  --AKIKIE----DEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHL  211

Query  185  iivgggvigiEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAK  244
            ++VGGG IG+E ++    FG KVT++E +D IL+  D  ++K +   LK  GI  IT+A 
Sbjct  212  VVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA-  270

Query  245  VLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIV-TENGMIS  303
             L +   +T+D+++++ + DG       +  LVSIGR++N   IGLEN ++V  ++G I 
Sbjct  271  -LVQGGENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIK  329

Query  304  VNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSP  363
            +N+ CQT+  H+YAIGD  GG  LAH AS E+ IA E ++G N+  +D   +P  I+S P
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNS-VIDFQAMPFVIFSDP  388

Query  364  EAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIG  423
            E A  GLTE EAK +G +   ++FPF A ++AL  +++DGFV++VA+++T  +LGV+M+G
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  424  PHVTDMISEAGLA  436
            P+V+ +I+EA +A
Sbjct  449  PEVSSLIAEAVFA  461

837) Gdia_2120 in NC_011365


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  230 bits (857),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 189/462 (41%), Positives = 306/462 (67%), Gaps = 7/462 (1%)

Query  124  DVIVIGAGPGGYVCAIRAAQLGFKVACVEKRATLGGTCLNVGCIPSKALLQSSENyhaaa  183
            D++VIGAG+GGYV AIRAAQLG KV  V+K A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  184  hdyaghgIVLDSVKLDLARMMARKGEVVEANVKGVEFLFKKNKVTWLKGTGKLEGT--GR  241
            H  +    V + V++D++ ++ +K+ +V+    G+  L+K N V  + G + L  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  242  ITVDGKP--VTAKHIVIASGSDSAGLPGVEVDEKVIVTSTGALELSAVPKKMvvigggvi  299
            I +++     + K++++A GS +  L ++  D+K I++ST AL+L  VP+ +VV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  300  gLELGSVWHRLGAEVTVVEFLDRLVPGTDGEIAKQFQRILTKQGLQFKLGHKVTKADKTG  359
            GLELG+   ++GA VT++E  D +++GTD  ++K  +R L   G+    +  V  +++TG
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  360  KGVTLTVEPAAGGTAETLEADIVLLAIGRNAYSKGLGVEEAGVALDKRGRIITDGHFATS  419
              V + V+   +G  E ++ D  L++IGR++ +  +G+E+ GV LD +G I  +    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  420  VPGVYAIGDVIAGPMLAHKAEEEGVAIAEILAGQAGHVNYDAIPGVVYTWPEVATVGRTE  479
            +  VYAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  480  EDLKSSGVTYKVGKFPFTANGRARAIGMTDGFVKVLAEATTDRVLGVHIIGPGAGEMIAE  539
             + K  G     ++FPF AN+RA +++ +DGFV+V+AE  T RVLGV+++GP  + +IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  540  ATLAMEFGASSEDIARTCHAHPTLSEALKEAALDVEKRAIHI  581
            A +A+E GA++ED++ T HAHPTL+E+L EAA +V  +A H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

838) sucC in NC_010125


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  230 bits (857),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 189/462 (41%), Positives = 306/462 (67%), Gaps = 7/462 (1%)

Query  124  DVIVIGAGPGGYVCAIRAAQLGFKVACVEKRATLGGTCLNVGCIPSKALLQSSENyhaaa  183
            D++VIGAG+GGYV AIRAAQLG KV  V+K A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  184  hdyaghgIVLDSVKLDLARMMARKGEVVEANVKGVEFLFKKNKVTWLKGTGKLEGT--GR  241
            H  +    V + V++D++ ++ +K+ +V+    G+  L+K N V  + G + L  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  242  ITVDGKP--VTAKHIVIASGSDSAGLPGVEVDEKVIVTSTGALELSAVPKKMvvigggvi  299
            I +++     + K++++A GS +  L ++  D+K I++ST AL+L  VP+ +VV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  300  gLELGSVWHRLGAEVTVVEFLDRLVPGTDGEIAKQFQRILTKQGLQFKLGHKVTKADKTG  359
            GLELG+   ++GA VT++E  D +++GTD  ++K  +R L   G+    +  V  +++TG
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  360  KGVTLTVEPAAGGTAETLEADIVLLAIGRNAYSKGLGVEEAGVALDKRGRIITDGHFATS  419
              V + V+   +G  E ++ D  L++IGR++ +  +G+E+ GV LD +G I  +    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  420  VPGVYAIGDVIAGPMLAHKAEEEGVAIAEILAGQAGHVNYDAIPGVVYTWPEVATVGRTE  479
            +  VYAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  480  EDLKSSGVTYKVGKFPFTANGRARAIGMTDGFVKVLAEATTDRVLGVHIIGPGAGEMIAE  539
             + K  G     ++FPF AN+RA +++ +DGFV+V+AE  T RVLGV+++GP  + +IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  540  ATLAMEFGASSEDIARTCHAHPTLSEALKEAALDVEKRAIHI  581
            A +A+E GA++ED++ T HAHPTL+E+L EAA +V  +A H+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

839) GLX_19840 in NC_016027


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  230 bits (856),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 187/463 (41%), Positives = 309/463 (67%), Gaps = 9/463 (1%)

Query  122  DVIVIGAGPGGYVCAIRAAQLGFKVACVEKRATLGGTCLNVGCIPSKALLQQSENFHAAK  181
            D++VIGAG+GGYV AIRAAQLG KV  V+K A LGG CLN GCIPSKAL+  SE     K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  182  DEYGDMGIIIDS-VKLDLAKMMARKQSVVEANVKGVEFLFKKNKVTWLKGTGKVEGT--G  238
            +    MG+ + + V++D++ ++ +K+++V+    G+  L+K N V  + G + +  +  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  239  RITVDGKP--VTAKHIVIASGSDSAGLPGVEVDEKQIVTSTGALELSAVPKKMvvigggv  296
            +I +++     + K++++A GS +  L ++  D+K+I++ST AL+L  VP+ +VV+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  297  igLELGSVWHRLGADVTVIEYLDRLVPGTDNEVAKTFQRILTKQGLKMKLGHKVTKAEKS  356
            IGLELG+   ++GA VT++E  D +++GTD  ++KT +R L   G+ +  +  V  +E++
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  357  AKGVTLTVEPAKGGTAETLEADVVLLAIGRTAASKGFGLEEAGIELDKRGRIVTDAHYAT  416
            +  V + V+   +G  E ++ D  L++IGR + +  +GLE+ G+ LD +G I  +    T
Sbjct  279  GDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQT  336

Query  417  SVPGIYAIGDVIAGPMLAHKAEEEGVAIAELLAGQAGHVNYGAIPAVVYTWPEVATVGKT  476
            ++  +YAIGD  +G +LAHKA  E+   AE+++GQ + +++ A+P V+++ PEVA  G T
Sbjct  337  NIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLT  396

Query  477  EENLKEEGVSYKVGKFPFTANGRARAIGMTDGFVKVLADSTTDQVLGVHIIGPMAGELIA  536
            E + KE G     ++FPF AN+RA +++ +DGFV+V+A+  T +VLGV+++GP  + LIA
Sbjct  397  EKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIA  456

Query  537  ECTMAIEFGASSEDIARTCHAHPTLSEAVKEAALDVDKRAIHI  579
            E   AIE GA++ED++ T HAHPTL+E++ EAA +V  +A H+
Sbjct  457  EAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

840) lpdA1 in NC_016622


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  228 bits (851),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 191/449 (43%), Positives = 308/449 (69%), Gaps = 8/449 (1%)

Query  21   AIRAAQLGFKVACVEKRGTLGGTCLNVGCIPSKALLAASEKFEEAAHGLAKFGIKVGG-V  79
            AIRAAQLG KV  V+K + LGG CLN GCIPSKAL++ASE+  +  H+    G+KV+G V
Sbjct  55   AIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIKHA-NTMGLKVSGEV  112

Query  80   ELDLPGMLAHKDKVVKDNVGGIEFLFKKNKVAWLKGAGKITAPN--TVEVDGVGTITASK  137
            ++D+P ++  KD +V+   +GI  L+K N V  + G + +T ++   + +++   I + K
Sbjct  113  QVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYK  172

Query  138  AIVIATGSDVTPLPGIAIDEKRVVSSTGALSLPEVPKHlvvigggviglelgSVWGRLGA  197
             +++A GS    L ++++D+KR++SST AL L EVP+HLVV+GGG IGLELG+  +++GA
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  198  KVTVVEYLDRVLPTMDNELSKQAQRIFAKQGMDFKLSTKVTGASMTETGVALTVEPAAGG  257
            KVT++E  D +L+  D  L+K  +R +   G+     + V G+   +TG  + V+   +G
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE--NTGDEVNVHVQVDG  290

Query  258  EAQTIEADTVLVAIGRRPYTEGLGLEAVGVELE-RGRVKIDHHFQTNVPGIYAIGDVVEG  316
              + I+ D  LV+IGR+P T  +GLE +GV L+ +G +KI++  QTN+  +YAIGD   G
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  317  PMLAHKAEEEGVALAEQLAGQKSHVNHDLVPGVVYTWPEVAAVGKTEEQLKAAGVAYKTG  376
             +LAHKA  E+   AE ++GQ+S ++ + +P V+++ PEVA  G TE + K  G    ++
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  377  KFPFTANGRARAGGNTDGFVKILSDASTDQVLGVHMIGPNVSEMIGELVLAMEFSASAED  436
            +FPF AN+RA + +++DGFV+++++ +T +VLGV+M+GP+VS +I+E V+A+E +A+AED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  437  VARTCHAHPTLSEAVKEAALAVDGRPLHI  465
            ++ T HAHPTL+E++ EAA +V G++ H+
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

841) G432_03945 in NC_020561


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  228 bits (848),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 188/467 (41%), Positives = 297/467 (64%), Gaps = 17/467 (3%)

Query  7    DVLVIGSGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHSSHLYEEAH  66
            D+LVIG+G+GGYVAAIRAAQLG K      +  LGG CLN GCIPSKAL+ +S+     H
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASE--RVKH  97

Query  67   SGALAKFGVKIDGASLDLDAMHGQRLK----AVKGLTGGIEFLFKKNKVEWLKGRAAFT-  121
                   G+K+ G   +++    + +K     V+ LT+GI  L+K N VE + G A +T 
Sbjct  98   IKHANTMGLKVSG---EVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTE  154

Query  122  ---GKDTVEVAGKTYRAKNIVIATGSSVTPLPGVTVDNEVIVDSTGALELAKVPGHMvvi  178
               +K  +E   + +  K++++A GS    L ++  D+  I+ ST AL+L  VP H+VV+
Sbjct  155  AHIAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  179  gggvigLELGSVWRRLGAQVTVVEYLDQILPGMDGEVRKEAAKLFKKQGFDIKTSTKVTK  238
            GGG IGLELG+   ++GA+VT++E  D IL+G D  + K   + +K  G+ + T + V  
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  239  VERKGDGAVLTVEPAAGGEAQTIEADVVLVAIGRRPNTDGLALDKAGLAVNQRGQIDIDH  298
             E  GD   + V+   +G  + I+ D  LV+IGR+PNT+ ++L++ G+ ++++G I I++
Sbjct  275  GENTGDE--VNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  299  DFATAVPGIWAIGDVVPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTSPEIAG  358
               T +  + AIGD   G +LAHKA  E+   AE I+G  ++++ + +P V+++ PE+A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  359  VGLTEEQAKERG-EVKVGKFPMLANSRAKTIDDTAGFVKVIADAKSDRVLGVWIVASVAG  417
             GLTE +AKE+G E   ++FP  AN+RA ++ D+ GFV+V+A+ ++ RVLGV +V++  +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  418  TMIAQAAQAMEFGATSEDIAYTCHAHPTHPEALKEAAMAVQGLPIHI  464
            ++IA+A  A+E GA +ED++ T HAHPT PE+L EAA +V G + H+
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

842) SL003B_4229 in NC_015259


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  227 bits (846),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 188/454 (42%), Positives = 303/454 (67%), Gaps = 6/454 (1%)

Query  5    DLVVIGTGPGGYVCAIKAAQLGLKVAVVEKRATHGGTCLNVGCIPSKALLHASEMFEEAG  64
            DL+VIG+G+GGYV AI+AAQLG KV +V+K A  GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HGFESLGIKV-GKPKLDLAAMMAHKQATIDANVGGIAFLLKKNKIDAYHGLGRILSAGRV  123
            H+ +++G+KV G  ++D++ ++  K++ ++   +GI  LLK N ++   G    L+ +++
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISG-EAYLTEAHI  157

Query  124  ELTAEDAKVTELAAKAIVIATGSDVMPLPGVEIDEKQIVSSTGALALDKvpgrlvvvggg  183
                 +     ++ K +++A GS  + L ++ +D+K+I+SST AL L+ VP +LVVVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  viglelgsvWNRLGAKVTVVEFMDKILGPMDGDVSKQFQRLLAKQGMEFRLSSKVTGVEK  243
             IGLELG+   ++GAKVT++E  D IL+  D  ++K  +R L   G+     + V G E+
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  KGKGLAVSVEPAAGGAAETIEADIVLVAIGRRPYTAGLGLDEVGVKLDARGRVEIDDRFE  303
             G  + V V+   +G  E I+ D  LV+IGR+P T+ +GL+++GV LD +G + I+++ +
Sbjct  278  TGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQ  335

Query  304  TSVPGIYAIGDVVVGPMLAHKAEDEGVALAEILAGQAGHVNYDVIPGVVYTAPEVASVGR  363
            T++  +YAIGD   G +LAHKA  E+   AE+++GQ + ++++ +P V+++ PEVA  G 
Sbjct  336  TNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGL  395

Query  364  TEEELKAAGVAYKVGKFAFAANGRARAMNRSDGFAKVLADAETDRVLGVHIVGHGAGEMI  423
            TE E K  G     ++F+F AN+RA +++ +DGF +V+A+ +T RVLGV++VG   + +I
Sbjct  396  TEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  424  HEAAVLMEFGGSAEDLGRTCHAHPTMSEAVKEAA  457
             EA   +E G++AEDL+ T HAHPT++E++ EAA
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

843) Rvan_0653 in NC_014664


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  227 bits (847),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 194/466 (42%), Positives = 303/466 (66%), Gaps = 9/466 (1%)

Query  6    DLIVIGSGPGGYVCAIRAAQLGLKTAIVEKNPTFGGTCLNVGCIPSKALLHASELYEEAG  65
            DL+VIG+G+GGYV AIRAAQLG K  +V+K + +GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HGFAGMGIKVKPEL--DLAAMMKYKAEGIDGNVKGVEYLLKKNKIDTHRGTGRVAGAGKV  123
            H+   MG+KV  E+  D++ ++K K   ++    G+  LLK N ++   G + ++ A   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  SVTAADGAVETLATKAIVIATGSDIVRLPGIEIDEKRVVSSTGALDLDRVPEHlvviggg  183
             +   D   + ++ K +++A GS  V L ++ +D+KR++SST AL+L+ VP+HLVV+GGG
Sbjct  159  KIKIEDEE-QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  184  viglelgSVWRRLGAKVTVVEFLDRILPGMDNEVVKSFQRILEKQGVAFRVSQKVTGVKA  243
             IGLELG+   ++GAKVT++E  D IL+G D  + K+ +R L   G++      V G   
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  244  NGKGPLKVAVAPASGDGATEEFEASHVLVAVGRVPYTEGLGLEEAGVAIDNKRRIVVDDH  303
             G + ++V V     DG  E ++    LV++GR P T  +GLE+ GV +D++  I +++ 
Sbjct  278  TG-DEVNVHVQV---DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  304  FETNVPGIYAIGDVIRGPMLAHKAEDEGVAVAENLAGKAGHVNYGVIPGVIYTYPEVASV  363
             +TN+  +YAIGD   G +LAHKA  E+   AE ++G+ + +++  +P VI++ PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  364  GKTEESLKAAGVEYTVGKFPFTANGRAKVNRQTEGFVKILADAKTDRVLGVHILGPDAGN  423
            G TE   K  G E   ++FPF AN+RA    +++GFV+++A+ +T RVLGV+++GP+ ++
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  424  MIAEAAVLMEFGGSAEDLARTCHAHPTLPEAVKEAALAVGKRAIHI  469
            +IAEA   +E G++AEDL+ T HAHPTLPE++ EAA +V  +A H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

844) Ornrh_0516 in NC_018016


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  226 bits (841),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 190/452 (43%), Positives = 306/452 (68%), Gaps = 4/452 (0%)

Query  5    DVTVIGSGPGGYVAAIRAAQLGFKTALIEKYNTLGGTCLNVGCIPSKSLLDSSEHY-HNA  63
            D+ VIG+G+GGYVAAIRAAQLG K  L++K   LGG CLN GCIPSK+L+ +SE+  H  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HKNFKEHGISLDNLSIDLAKMIERKNAVVEQTTKGIDFLMDKNKIQVFKGVGSFKDKNHI  123
            H N     +S +++ +D++ ++ +K+++V++ T GI  L+  N ++V+ G + + + +  
Sbjct  100  HANTMGLKVS-GEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  124  LIQSEGGTQEIETKNTIIATGAKPASLPFIKIDKERIITSTEALSLKEIPKHlivigggv  183
             I+ E+  Q +  K+ I+A G+ P  L  + +D+ RII+STEAL L+E+P+HL+V+GGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  184  iglelgsvYQRIGAKVSVVEYADRLVPTMDGDVSKELRKILKKLGMDLHLSCKVSKVERA  243
            IGLELG+ Y ++GAKV+++E +D +++  D  ++K +++ LK +G+ +     V   E +
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  244  GEEVKVAFENKKGETEEITGDYVLVAVGRKPYTEGLGLEKVGVEVDERGRIVTNEHLETN  303
            G+EV+V  +   G  E I  DY LV++GRKP T  +GLE++GV +D++G I  N+  +TN
Sbjct  279  GDEVNVHVQVD-GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  304  IDGIYAIGDVVKGAMLAHKAEEEGVYVAERLAKQKPHIDYNLIPGVVYTWPEVAGVGKTE  363
            I+ +YAIGD   G +LAHKA  E+   AE ++ Q++ ID++ +P V+++ PEVA  G TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  364  EQLKEEKVAYKVGKFNVRALGRARASGDIDGFVKVLADEKTDEILGVHIVSARAADMIAE  423
             + KE       ++F  +A +RA + +D DGFV+V+A+ +T  +LGV++V++  + +IAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  424  AVTAMEFRASAEDLARICHAHPTYMEAVKEAA  455
            AV A+E  A+AEDL+   HAHPT  E++ EAA
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

845) pdhD in NC_013854


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  223 bits (831),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 192/449 (43%), Positives = 301/449 (68%), Gaps = 8/449 (1%)

Query  28   AIRAAQLGFKVACVEKRGTLGGTCLNVGCIPSKALLAASEKFEEAAHGLAKFGIKVGG-V  86
            AIRAAQLG KV  V+K + LGG CLN GCIPSKAL++ASE+  +  H+    G+KV+G V
Sbjct  55   AIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIKHA-NTMGLKVSGEV  112

Query  87   ELDLPGMQAHKDKVVKDNVTGIEFLFKKNKVTWLKGAGKITAAN--TVEVEGVGAITASK  144
            ++D+P +   KD +V+    GI  L+K N V  + G + +T A+   + +E+   I + K
Sbjct  113  QVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYK  172

Query  145  AIVIATGSDVAPLPGIAIDETRVVSSTGALSLPEVPKHlvvigggviglelgSVWGRLGA  204
             +++A GS    L ++++D+ R++SST AL L EVP+HLVV+GGG IGLELG+  +++GA
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  205  KVTVVEYLDRVLPTMDGELSKQAQRIFAKQGMDFKLSTKVTGAAVTEAGVTLTVEPAAGG  264
            KVT++E  D +L+  D  L+K  +R +   G+     + V G+  T   V + V+   +G
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQ--VDG  290

Query  265  EAQTIEADTVLVAIGRRPYTEGLGLEAVGVELE-RGRVKIDGHFQTNVPGIYAIGDVVEG  323
              + I+ D  LV+IGR+P T  +GLE +GV L+ +G +KI+   QTN+  +YAIGD   G
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  324  PMLAHKAEEEGVALAEQLAGQKSHVNHDLVPGVVYTWPEVAAVGKTEEQLKAAGVAYKTG  383
             +LAHKA  E+   AE ++GQ+S ++ + +P V+++ PEVA  G TE + K  G    ++
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  384  KFPFTANGRARAGGNTDGFVKILSDAATDQVLGVHMIGPNVSEMIGELVLAMEFSASAED  443
            +FPF AN+RA + +++DGFV+++++  T +VLGV+M+GP+VS +I+E V+A+E +A+AED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  444  VARTCHAHPTLSEAVKEAALAADGRALHI  472
            ++ T HAHPTL+E++ EAA +  G+A H+
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

846) TtJL18_0102 in NC_017587


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  223 bits (830),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 186/461 (41%), Positives = 305/461 (67%), Gaps = 10/461 (2%)

Query  3    DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERI--Ye  60
            DLLVIGAG+GGYVAAIRAAQLG KV +V+K   LGG CL  GCIPSKAL+ ++ER+    
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKA-ELGGVCLNRGCIPSKALISASERVKHIK  99

Query  61   akkgllgakvkgvelDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSER---  117
              + +       V++D+P ++  KD +V+  T+G+  L+K NG+    G A +L+E    
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHIA  158

Query  118  KVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEALAFPEVPKRlivvgggv  177
            K+ +E+  + +  + +++A GS P+       D  R+++STEAL + EVP++L+VVGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  178  iglelgvvWHRLGAEVIVLEYMDRILPTMDAEVSRAAERVFKKQGLTIRTG--VRVTAVV  235
            IGLELG    ++GA V +LE  D IL+  D+ ++++  R +K  G+T+ T+  V+     
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  236  PEAKGARVELEG-GEVLEADRVLVAVGRRPYTEGLSLENAGLFTDERGRIPVDEHLRTRV  294
             +    +V+++G  E+++ D  LV++GR+P T  ++LEN G+  D++G I +++  +T +
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  295  PHIYAIGDVIRGPMLAHKASEEGIAAVEHMATGFGHVDYQAIPSVVYTHPEVAGVGYTEE  354
             H+YAIGD   G +LAHKAS E+  A E ++   + +D+QA+P V++++PEVA  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  355  ELKEKGIPYKVGKFPYSASGRARAMGETEGFVKVLAHAKTDRILGVHGIGARVGDILAEA  414
            E KEKG     ++FP+ A++RA ++++++GFV+V+A+ +T R+LGV+ +G+ V+ ++AEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  415  ALAIFFKASAEDVGRAPHHHPSLSEILKEAALAAWEKPIHL  455
             +AI   A+AED++ + H HP+L+E L EAA +    + H+
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

847) Sala_2225 in NC_008048


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  222 bits (827),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 191/466 (41%), Positives = 304/466 (66%), Gaps = 14/466 (3%)

Query  7    DVLVIGAGPGGYVAAIRAAQLGLKTACAEGRATLGGTCLNVGCIPSKAMLHASEYFDAAA  66
            D+LVIGAG+GGYVAAIRAAQLG K     ++A LGG CLN GCIPSKA++ ASE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   NGSMAAMGIRVKPELDLDTMHGQR-RDA-VKGLTGGIEFLFRKNKVDWLKG--Y--ARFT  120
            +++  +MG++V  E+++D  +  + +D+ V+ LT+GI  L++ N V+ + G  Y      
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  121  SKDSVEVAGKSYRAKNIIIATGSSVTPLPGVEVDNDKGVIVDSTGALELAKVPGHMvvig  180
            +K  +E   + +  K++I+A GS    L ++  D+ +  I+ ST AL+L  VP H+VV+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKR--IISSTEALQLQEVPNHLVVVG  215

Query  181  ggvigLELGSVWRRLGAKVTCVEFLDQILPGMDGDVRKEANKIFKKQGIEFKLKTKVTKA  240
            GG IGLELG+   ++GAKVT +E  D IL+G D  + K  ++ +K  GI     + V  +
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  241  EVKGKKAVLTLEPAAGGESETLEADVVLVSIGRRPNTDGLALDKAGLEVNQRGQIEIDHD  300
            E  G    + ++   +G  E ++ D  LVSIGR+PNT+ ++L++ G+ ++++G I I++ 
Sbjct  276  ENTGDE--VNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  301  FRTAIDGIWAIGDVVPGPMLAHKAEDEGIACAENIAGQTGIVNHDVIPSVVYTWPEIAGV  360
             +T I+ + AIGD   G +LAHKA  E+   AE I+GQ ++++ + +P V+++ PE+A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  361  GLTEEQAKEKG-EVRVGKFPMLANSRAKTNHEPDGFVKVIADARTDRVLGVWCIASVAGT  419
            GLTE +AKEKG E   ++FP  AN+RA +  ++DGFV+V+A+  T RVLGV  +++  ++
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  420  MIAQAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI  465
            +IA+A  A+E GA +ED++ T HAHPT +E++ EAA +V G + H+
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

848) lpdA2 in NC_014974


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  221 bits (822),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 187/445 (43%), Positives = 303/445 (69%), Gaps = 10/445 (2%)

Query  5    DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEVK  64
            DLLVIGAG+GGYVAAIRAAQLG KV +V+K   LGG CL  GCIPSKAL+ ++ER+ ++K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKA-ELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   KG-LIGARVQG-LEVDLPALLAHKDKVVQANTQGIEFLFKKNGIARHLGRARFLSDR---  119
             +  +G +V G ++VD+P ++  KD +V+  T+GI  L+K NG+    G A +L++    
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEA-YLTEAHIA  158

Query  120  KVLVEETGEELSARYFLIATGSAPLIPPWAEVDGKRVVTSTEALSFPEvpgrlivvgggv  179
            K+ +E+  + +S + +++A GS P+       D KR+++STEAL + EVP +L+VVGGG 
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGY  218

Query  180  iglelgvvWHRLGAEVLILEYLDRILPTMDAELSRAAEKVFRKEGLEIRTGVKVKAVRPE  239
            IGLELG    ++GA V ILE  D IL+  D+ L+++  + ++  G+ + T+  V++    
Sbjct  219  IGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENT  278

Query  240  GREA--RVELEG-GEVLTADRVLLAVGRRPYTEGLDLERAGLATDEKGRIPVDEHLRTRV  296
            G E   +V+++G  E++  D  L+++GR+P T  ++LE  G+  D++G I +++  +T +
Sbjct  279  GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNI  338

Query  297  LHIYAIGDVVPGPMLAHKASEEGIAAVEHMAKGYGHVDYLAIPSVVYTHPEVAGVGYTEE  356
             H+YAIGD   G +LAHKAS E+  A E ++   + +D+ A+P V++++PEVA  G TE 
Sbjct  339  EHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEK  398

Query  357  ELKAKGIPYKVGRFPYSASGRARAMGETEGFVKVLAHAKTDRILGVHGIGARVGDVLAEA  416
            E K KG     +RFP+ A++RA ++++++GFV+V+A+ +T R+LGV+ +G+ V+ ++AEA
Sbjct  399  EAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEA  458

Query  417  ALAIFFKASAEDLGRAPHAHPSLSE  441
             +AI   A+AEDL+ + HAHP+L+E
Sbjct  459  VFAIEAGANAEDLSLTIHAHPTLPE  483

849) Meso_3400 in NC_008254


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  220 bits (821),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 189/456 (42%), Positives = 301/456 (67%), Gaps = 8/456 (1%)

Query  6    DVVVIGTGPGGYVCAIKAAQLGLKTAVVEKRTNHGGTCVNVGCIPSKALLHATEMFAEAG  65
            D++VIG+G+GGYV AI+AAQLG K  +V+K ++ GG C+N GCIPSKAL+ A+E   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   HSFADLGIDV-GTPKLDLKKMLAHKEKTVDQNVKGLDFLFKKNKIDVFRGAGRIAAAGKV  124
            H+   +G+ V G  ++D+  ++  K+  V++   G+  L+K N ++V+ G + ++ A   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  125  VVTGEDGKEQTVETKNIVIATGSDVAGIPGVDVDFDERVIVSSTGALELPAVPARMvvvg  184
             +  ED  EQ    K++++A GS    + ++   FD++ I+SST AL+L  VP ++VVVG
Sbjct  159  KIKIEDE-EQIFSYKDLILAIGSLPVELKSMP--FDQKRIISSTEALQLQEVPNHLVVVG  215

Query  185  ggviglelgsvWSRLGAKVTVIEYLDTILGGMDGEVAKQFQRMLAKQGFGFKLGAKVTGI  244
            GG IGLELG+  +++GAKVT++E  DTIL+G D  ++K  +R L   G+    +A V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  245  AKTEGGASVTFEPAKGGEAETIDADVVLVATGRKPYIDGLGLKEAGVEVDERGRVKTDGH  304
             +T  G  V  +   +G  E I+ D  LV+ GRKP  + +GL + GV +D++G +K +  
Sbjct  276  ENT--GDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  305  LRTNVPGIYAIGDVITGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPSVVYTSPEVASV  364
             +TN+  +YAIGD   G +LAHKA  E+   AE+I+GQ + ++++ +P V+++ PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  365  GKTEEELKKAGIEYNAGKFPFSANGRARSMLHTDGFVKVLADKKTDRVLGVHILGFGAGE  424
            G TE E K  G E  +++FPF AN+RA S+ ++DGFV+V+A+K+T RVLGV+++G   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  425  MIHEAAVLMEFGGSSEDLARTCHAHPTMSEAVKEAA  460
            +I EA   +E G+++EDL+ T HAHPT++E++ EAA
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

850) Swit_1296 in NC_009511


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  220 bits (821),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 189/465 (41%), Positives = 305/465 (66%), Gaps = 14/465 (3%)

Query  7    DVIVIGAGPGGYVAAIRAAQLGLRTACVESRETLGGTCLNVGCIPSKAMLHASELYDEAA  66
            D++VIGAG+GGYVAAIRAAQLG +   +  +  LGG CLN GCIPSKA++ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   SGKLAKLGIKTQVELDLDTMHGQRRDAVKGLTGGIEFLFKKNKVEWLKGHAAFT----GK  122
             ++   L +  +V++D+  +   + + V+ LT+GI  L+K N VE + G+A +T    +K
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  123  DRIDVAGKSYRARNIVVATGSSVTPLPGVEIDEKVVVSSTGALELAKVPghlvvigggvi  182
             +I+   + +  +++++A GS    L ++ +D+K ++SST AL+L  VP HLVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  183  glelgSVWKRLGAKVTVVEFLDQLLPGMDGEVRKEAAKIFKKQGIELKLSTKVTGVAVKG  242
            GLELG+   ++GAKVT++E  D +L+G D  + K   + +K  GI +     +T+  V+G
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITV-----ITDALVQG  274

Query  243  GKAT---VTVEPAAGGAAETLEADAVLVSIGRRPNTEGLALERAGLTVNKRGQIEVDHDL  299
            G  T   V V+   +G  E ++ D  LVSIGR+PNT  ++LE  G+ ++ +G I +++  
Sbjct  275  GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  ATAVPGIWAIGDVVPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPGVVYTMPEIAGVG  359
             T +  + AIGD   G +LAHKA  E+   AE I+G  ++++ + +P V+++ PE+A  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  LTEEEARERG-EVKIGKFPMLANSRAKTNHEPDGFVKVIADAKTDRVLGVHIIASVAGTM  418
            LTE EA+E+G E   ++FP  AN+RA +  ++DGFV+V+A+ +T RVLGV+++++  +++
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  419  IAQAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHM  463
            IA+A  A+E GA +ED++ T HAHPT +E++ EAA +V G + HM
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

851) Bresu_3327 in NC_014375


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  219 bits (816),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 188/464 (41%), Positives = 302/464 (66%), Gaps = 13/464 (2%)

Query  9    VLIIGAGTGGYVAGIRCgqlgldtvlvdggdglggtclnvgCIPSKAIIHAAGKFETVAK  68
            +L+IGAG+GGYVA+IR +      V++ +   LGG CLN GCIPSKA+I A+ +   +  
Sbjct  42   LLVIGAGSGGYVAAIR-AAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  69   AAGDGTLGITASSP-AIDLGQTVAWKDGIVRklnagvaallkkakvkvikGWATFEDAKT  127
            A    T+G+  S+   +D+ + V WKDGIV KL  G+ +LLK   V VI G A + +A  
Sbjct  101  AN---TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  128  CRVETADGPVTISAEHVILATGSEPVELPFLPFGGD-VISSTEALSLDAVPNRLVVVGGG  186
             ++   D    +S  ++ILA GS PVEL  +PF+   +ISSTEAL L+ VPN+LVVVGGG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGG  217

Query  187  YIGLELGIAYRKLGAQVAIVEMADRILPLYDKALTDPVMKWLTDHGVELHLGA--RAGGF  244
            YIGLELG AY K+GA+V+I+E +D IL+  D  LT  V + L + G+ +  +A  ++G  
Sbjct  218  YIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGEN  277

Query  245  GDGKLSITTK-DGEPLQLDADKVLVTVGRRPRTQGWGLENMGVAMAGP-FVKVDDRCATS  302
             ++ +++  + DG    ++ D  LV++GR+P T   GLEN+GV + +  F+K++++C T+
Sbjct  278  TGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  303  MRNVWAVGDLTGEPMLAHKGSAQGEVVAEIIAGHDKRFDPVTIAAVCFTEPEIVSAGLGP  362
            + +V A+GD +G  +LAHK+S ++ + AE+I+G++  +D  +++ V F++PE+  +GL  
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  363  LDVAGRD-DVITAVFPLAAIGRALAIEAGEDGGFVRVLASKSDHRLLGVQAVGQHVAELS  421
             +   ++ + +++ FP+ A +RAL++  ++ +GFV+V+A K+  R+LGVQ VG +V+ L 
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSV--SDADGFVQVVAEKNTKRVLGVQMVGPEVSSLI  455

Query  422  NSFAQMLEMGAVLEDVAGVIHVHPTLGEAFHEASLRALGHAIHI  465
                  +E GA  ED++  IH HPTL E++ EA+   +GHA H+
Sbjct  456  AEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

852) Theos_2095 in NC_019386


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  217 bits (809),  Expect = 9e-58, Method: Compositional matrix adjust.
 Identities = 205/465 (45%), Positives = 324/465 (70%), Gaps = 11/465 (2%)

Query  5    DLIVIGTGPGGYHAAIRGAQlglrvlaveagavggvclNVGCIPtkallhaaealhtlka  64
            DL+VIG+G+GGY AAIR+AQLG +V+ V+ + +GGVCLN GCIP+KAL+ A+E +  +K 
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIKH  100

Query  65   GEAFGLKAKAEL--DLKGLGAWRDSvvrkltggvgtllkgnkvELVQGFARLVGPKA---  119
            +++ GLK  +E+  D+  +  W+D++V KLT+G+ TLLKGN VE++ G A L  +     
Sbjct  101  ANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKI  160

Query  120  -IEVGGKRYEARSLILATGSEPAALPGFPFGED-VWDSTRALKVEEGVPGRLLVIGGGAV  177
             IE   + +  + LILA GS P  L + PF++  +  ST AL+++E VP +L+V+GGG +
Sbjct  161  KIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQE-VPNHLVVVGGGYI  219

Query  178  GLEFGQIYHRLGSQVTLIEYMPEILPQGDKETAGLLRRALMKEGLVIKTGTKAVGYEKKA  237
            GLE+G  Y ++G++VT++E    IL+  D   +  ++R L   G+ + T++   G E+ +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  238  DGLHVRLEPAEGGKGEEIVVDKILVAVGRKPRTEGLGLEAFGILRDPKGFIQVNGRLETA  297
            D ++V+++   +GK E I  D  LV++GRKP T  +GLE +G++ D +GFI++N + +T 
Sbjct  280  DEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  298  VKGVYAIGDAARPPLLAHKAMKEGLIAAENAAGRDAAFDYQ-IPSVVYTDPEWASVGLTE  356
            +  VYAIGD A   LLAHKA  E+ IAAE  +G+++ +D+Q +P V+++DPE A  GLTE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  357  EEARRAGYRVKVGRFPLSASGRALTLGKTEGLIKVVGDEETDLLLGVHILGPaasdliae  416
             EA+  GY    +RFP+ A++RAL+++ ++G+++VV++ +T  +LGV+++GP  S LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  417  aalalemgaTVTDLALTVHPHPTLSEGLMEAAEAFHKQAIHILNR  461
            A +A+E GA   DL+LT+H+HPTL+E LMEAAE+   +A H+LN+
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHMLNK  502

853) lpd in NC_009952


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  215 bits (802),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 188/455 (42%), Positives = 302/455 (67%), Gaps = 11/455 (2%)

Query  5    DVIIIGSGPGGYVGAIRCAQLGLKTACVEGRDTLGGTCLNVGCIPSKALLHASHQVHEAE  64
            D+++IG+G+GGYV+AIR AQLG K   + ++  LGG CLN GCIPSKAL+ AS++V +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNFEKMGIKVPAP-KIDWKTMLAYKDDVIGQNTKGIEFLFKKNKVDWLKGWASIPEA--G  121
            H  + MG+KV++  ++D   ++  KD+++ + T GI  L+K N V+ + G A + EA  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  122  KVKVGDETH--EAKHIIIASGSEPASIPGAEVEIDEKVVVTSTGALELGKIPKRMvvvgg  179
            K+K+ DE +    K++I+A GS P  + +  + +D+K +++ST AL+L  +P+++VVVGG
Sbjct  159  KIKIEDEEQIFSYKDLILAIGSLPVELKS--MPFDQKRIISSTEALQLQEVPNHLVVVGG  216

Query  180  gviglelgsvYARLGTEVSVIEFMDGITPGQDLEVARQFQKILTKQGLKFITGaavqkva  239
            G IGLELG+ YA++G+ V+++E  D I +G D  +++  ++ L   G+  IT+A VQ   
Sbjct  217  GYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGE  276

Query  240  atkskakvtykMRKDDSEDSLEADIVLVSTGRKPFTEGLGLDALGVKMTERGQIATDGSY  299
             T    +V  ++  D+ E+ ++ D  LVS GRKP T  +GL+ +GV + ++G I  +   
Sbjct  277  NTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKC  334

Query  300  RTNVPGVYAIGDVIEGPMLAHKAEDEGMAVAEMIAGQHPHVNYGVIPGVIYTHPEVASVG  359
            +TN+  VYAIGD   G +LAHKA  E+   AE+I+GQ++ +++  +P VI+++PEVA  G
Sbjct  335  QTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTG  394

Query  360  KTEEQLKAEGVAYKVGKFSFMGNGRAKANFAADGFVKLLADKATDRILGAHVIGPMAGDL  419
             TE + K  G     ++F+F +N+RA +   ADGFV+++A+K T R+LG +++GP  + L
Sbjct  395  LTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSL  454

Query  420  IHEVCVAMEFGAAAEDLARTCHAHPTYSEAMREAA  454
            I E   A+E GA AEDL+ T HAHPT +E++ EAA
Sbjct  455  IAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

854) TMO_3004 in NC_017956


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  215 bits (799),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 173/426 (41%), Positives = 291/426 (69%), Gaps = 6/426 (1%)

Query  27   QLGLKTACVEKRGALGGTCLNVGCIPSKALLQSSELYAETKHGLEEHGVKLSG-VELDLA  85
            QLG K   V+K + LGG CLN GCIPSKAL+ +SE   + KH+ +  G+K+SG V++D++
Sbjct  60   QLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIKHA-NTMGLKVSGEVQVDMP  117

Query  86   AMMTRKGKVVSQLTGGIEGLFKKNKVTYFKGAGRFVDATTIEVALNDGGTETIKARETII  145
             ++ +K+ +V++LT+GI  L+K N V  + G + + +A    + ++D   + +  ++ I+
Sbjct  118  EVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEE-QIFSYKDLIL  176

Query  146  ATGSTHVDLPGVEIDEKRIVSSTGALEFEKVPgrlvvigggviglelgSVWSRLGSAVTV  205
            A GS  V+L ++ +D+KRI+SST AL+++ VP +LVV+GGG IGLELG+  +++G+ VT+
Sbjct  177  AIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGAKVTI  236

Query  206  VEFMDRITPEMDGEVSKQFQRILGRQGLKFRLSTKVTGADTSGEAIRLTVEPAKGGDAET  265
            +E  D I +  D  ++K  +R L   G+     + V G++ +G+ + + V+   +G  E 
Sbjct  237  LEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQV--DGKEEI  294

Query  266  IEADAVLVAIGRKPYTEGLGLEAVGIETGPRGRIEVDDHFRTNVPNIRAIGDVIKGPMLA  325
            I+ D  LV+IGRKP T  +GLE +G+  + +G I +++  +TN+ ++ AIGD   G +LA
Sbjct  295  IQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGGDLLA  354

Query  326  HKAEEEGVIVAEMIAGQSGHIDYNLIPGVIYTWPEVASVGRTEEQLKADGIAYKPGKFPF  385
            HKA  E+ I AE+I+GQ++ ID++ +P VI++ PEVA  G TE + K  G    +++FPF
Sbjct  355  HKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSSRFPF  414

Query  386  SANSRARAVGETDGFVKILADAETDRILGAHIIGPDAGTLISELVLAMEFKASAEDIART  445
             AN+RA +V+++DGFV+++A+ +T R+LG +++GP+ ++LI+E V+A+E  A+AED++ T
Sbjct  415  QANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAEDLSLT  474

Query  446  SHAHPT  451
             HAHPT
Sbjct  475  IHAHPT  480

855) Mesau_01067 in NC_019973


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  214 bits (798),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 185/461 (41%), Positives = 308/461 (67%), Gaps = 18/461 (3%)

Query  4    DVVIIGSGPGGYVCAIKAAQLGLKVAVVEKNATFGGTCLNIGCIPSKALLYASEMFAEAG  63
            D+++IG+G+GGYV AI+AAQLG KV +V+K A +GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HSFDTLGVEIPAP-RLNLKKMMAHKDATVSSNVNGVAFLFKKNKIDAFRGTGKVVAA--G  120
            H+ +T+G+ +++  ++++  ++  KD+ V+   +G+  L+K N ++ + G + +  A  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  121  KVSVTGEDGKVDEIETKNIVIATGS---DVAGIPGVKVDFDEKIIVSSTGALSLEKAPgh  177
            K+ + +E+   + +  K++++A GS   ++ ++P     FD+K I+SST AL L+  P H
Sbjct  159  KIKIEDEE---QIFSYKDLILAIGSLPVELKSMP-----FDQKRIISSTEALQLQEVPNH  210

Query  178  lvvvgggviglelgsvWARLGAKVTVVEFLDTILGGMDGEVSKQFQRLLSKQGFEFKLGA  237
            LVVVGGG IGLELG+  A++GAKVT++E  DTIL+G D  ++K  +R L   G+    +A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  238  KVTGVATAKKGATVTFEPVKGGAAETIEADAVLISTGRRAFSDSLGLKEAGVEVDERGRV  297
             V G    + G  V  +   +G  E I+ D  L+S GR++ ++ +GL + GV +D++G +
Sbjct  271  LVQG--GENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  298  KTDGHLRTNVPGIYAIGDVIAGPMLAHKAEDEGVAVAETIAGQAGHVNYDVIPSVVYTSP  357
            K +   +TN+  +YAIGD  +G +LAHKA  E+   AE I+GQ + ++++ +P V+++ P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  358  EIASVGRTEEELKKAGIDYKVGKFPFTANGRARAMLHTDGFVKILADKQSDRVLGVHIVG  417
            E+A  G TE E K  G +   ++FPF AN+RA ++ ++DGFV+++A+K++ RVLGV++VG
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  418  FGAGEMIHEAAVLMEFGGSSEDLARTCHAHPTMSEAVKEAA  458
               + +I EA   +E G+++EDL+ T HAHPT++E++ EAA
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

856) pdhD in NC_010793


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  214 bits (798),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 185/454 (41%), Positives = 301/454 (67%), Gaps = 13/454 (2%)

Query  6    DLVVIgggpggytgairgAQLGMKVACVDNRNTLGGTCLNVGCIPSKFLLHVSKKYEDIK  65
            DL+VIG+G+GGY +AIR+AQLG KV  + ++  LGG CLN GCIPSK L+  S +  +IK
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   AGFDDLGINV-GATKLNLANMLNSKNKRVQELGNGISGLFKKNKVSHFVGTGKIINSHEI  124
             + + +G++V G  +++++++++ K+  V+ L +GI  L+K N V  + G + + ++H  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  125  SVQtssgsntsitniHAKNILIATGSEITTLPGIEIDEEYIVSSTGALSIKSVPKKMLVI  184
             ++     +        K++++A GS    L ++ +D+  I+SST AL ++ VP+ ++V+
Sbjct  159  KIKIEDEEQIFSY----KDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  185  GGGYIGLELGSVWRRLGADVTVVERSDRIASAMDNELGKLTQQALSKQGIKFKFNTKIIS  244
            GGGYIGLELG+   ++GA VT++E SD I S+ D  L K  ++ L   GI    ++ + +
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  245  AVVKNQTVDVILQSVNGDNIQEEKINVDVVLISVGRKPYVKNLGLENIGIKLDKQHGTIE  304
            +    + V+V +Q V+G   +EE I+ D  L+S+GRKP   ++GLENIG+ LD ++G I 
Sbjct  275  GENTGDEVNVHVQ-VDG---KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD-DQGFIK  329

Query  305  VDEKFTTNIKNIYAIGDVIKGPMLAHKAEEEAIAAVENMTGQAGHVNYNVMPSVIYTFPE  364
            +++K  TNI ++YAIGD   G +LAHKA  EA  A E ++GQ + ++++ MP VI++ PE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  365  VASVGYTEEQLKELGIQYVVGKFPFLANSRAKVIYNDVTGMVKILAHAKTDLILGVHIIG  424
            VA  G TE + KE G + V ++FPF AN+RA  + +D  G V+++A+ +T  +LGV+++G
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSV-SDADGFVQVVAEKNTKRVLGVQMVG  448

Query  425  PEAGTLIAEAAVAMEFHASAEDIARTCHAHPTLS  458
            PE ++LIAEA  A+E  A+AED++ T HAHPTL+
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLP  482

857) lpdA in NC_016617


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  213 bits (794),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 192/449 (43%), Positives = 304/449 (68%), Gaps = 7/449 (1%)

Query  21   AIRAAQLGFKVACVEKRSALGGTCLNVGCIPSKALLAASEKYEEAKHGLAKFGIKVDG-V  79
            AIRAAQLG KV  V+K + LGG CLN GCIPSKAL++ASE+  + KH+    G+KV G V
Sbjct  55   AIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIKHA-NTMGLKVSGEV  112

Query  80   ELDLPGMLSHKDKVVKENTGGIEFLFKKNKIAWLKGAGRITAPN--TVEVEGVGTITASK  137
            ++D+P ++  KD +V+  T+GI  L+K N +  + G + +T ++   + +E+   I + K
Sbjct  113  QVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAKIKIEDEEQIFSYK  172

Query  138  AIVIATGSEVTPLPGIEIDEQKIVSSTGALELPEVPKRlvvigggviglelgSVWGRLGA  197
             +++A GS    L ++ +D+++I+SST AL+L EVP++LVV+GGG IGLELG+  +++GA
Sbjct  173  DLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYIGLELGTAYAKFGA  232

Query  198  EVTVVEFLDRILPTMDGEVSKQMQRILGKQGMTFKLGSKVTGAKVTNTGVTLSVEPAAGG  257
             VT++E  D IL+  D  ++K ++R L   G+T   ++ V G+  T   V + V+   +G
Sbjct  233  KVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTGDEVNVHVQ--VDG  290

Query  258  TAEEIKADVVLVAIGRRAFTNGLGLDAVGVEMDNRGRVKIGKHFETNVPGIYAIGDVVEG  317
              E I+ D  LV+IGR++ T  +GL+ +GV +D++G +KI +  +TN+  +YAIGD   G
Sbjct  291  KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIEHVYAIGDCAGG  350

Query  318  PMLAHKaeeegvalaellagqagHVNHDLVPGVVYTWPEVAAVGKTEEELKAAGTAYKAG  377
             +LAHKA  E+   AE+++GQ + ++ + +P V+++ PEVA  G TE E K  G    ++
Sbjct  351  DLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKEAKEKGYETVSS  410

Query  378  KFPFTANGRARASGTTDGFVKILADARTDKVLGVHMVGPNVSEMVAELAVAMEFSASAED  437
            +FPF AN+RA + + +DGFV+++A+  T +VLGV+MVGP+VS ++AE   A+E +A+AED
Sbjct  411  RFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAVFAIEAGANAED  470

Query  438  IARTCHAHPTLSEVTKEAALAVDGRALHI  466
            ++ T HAHPTL+E   EAA +V G+A H+
Sbjct  471  LSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

858) Mesop_1035 in NC_015675


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  213 bits (792),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 185/461 (41%), Positives = 307/461 (67%), Gaps = 18/461 (3%)

Query  4    DVVIIGSGPGGYVCAIKAAQLGLKVAVVEKNATFGGTCLNIGCIPSKALLHASEMFAEAG  63
            D+++IG+G+GGYV AI+AAQLG KV +V+K A +GG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HSFDTLGVEIPAP-KLNLKKMMAHKDTTVTSNVNGVAFLFKKNKIDSFRGTGKVVAA--G  120
            H+ +T+G+ +++  ++++  ++  KD  V    +G+  L+K N ++ + G + +  A  +
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  121  KVSVTGEDGKVEEIETANLVIATGS---DVAGIPGVKVDFDEKVIVSSTGALSLAKVPDH  177
            K+ + +E+   + +   +L++A GS   ++ ++P     FD+K I+SST AL L  VP+H
Sbjct  159  KIKIEDEE---QIFSYKDLILAIGSLPVELKSMP-----FDQKRIISSTEALQLQEVPNH  210

Query  178  lvvvgggviglelgsvWARLGAKVTVVEFLDTILGGMDGEVSKQFQRLLSKQGFEFklga  237
            LVVVGGG IGLELG+  A++GAKVT++E  DTIL+G D  ++K  +R L   G+    +A
Sbjct  211  LVVVGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDA  270

Query  238  kvtgvakakkgvSVTFEPVKGGAAETIDADVVLIATGRRAYSDTLGLKEAGVEADERGRV  297
             V G  ++   V+V  +   +G  E I+ D  L++ GR++ ++ +GL + GV  D++G +
Sbjct  271  LVQGGENTGDEVNVHVQV--DGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFI  328

Query  298  KTDGHLRTNVPGIYAIGDVIAGPMLAHKAEDEGVAVAETIAGQAGHVNYDVIPSVVYTSP  357
            K +   +TN+  +YAIGD  +G +LAHKA  E+   AE I+GQ + ++++ +P V+++ P
Sbjct  329  KINNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDP  388

Query  358  EIASVGKTEEELKKAGIDYKAGKFPFTANGRARAMLHTDGFVKILADKTSDRVLGVHIVG  417
            E+A  G TE E K  G +  +++FPF AN+RA ++ ++DGFV+++A+K + RVLGV++VG
Sbjct  389  EVAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVG  448

Query  418  FGAGEMIHEAAVLMEFGGSSEDLARTCHAHPTMSEAVKEAA  458
               + +I EA   +E G+++EDL+ T HAHPT++E++ EAA
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

859) Mlg_0271 in NC_008340


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (783),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 187/460 (41%), Positives = 315/460 (69%), Gaps = 2/460 (0%)

Query  128  DVLVLGAGPGGYTAAFRAADLGLKTVLVERYPTLGGVCLNVGCIPSKALLHAAKVIDEAE  187
            D+LV+GAG+GGY AA+RAA+LG K VLV++ + LGGVCLN GCIPSKAL+ A+  + +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  188  QFADHGITF-GKPKIDIRKLADWKSSVVKKLTGGLAGLAKQRKVEVVTGKGAFKDAYHLE  246
            +    G+   G  ++D+  +  WK ++V+KLT+G+  L K   VEV++G + + +A    
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  247  VDGKEGKRTISFRHCIIAAGSrpvvppplavddprvMDSTGAleleevperllvvgggii  306
            +   +  + +S+++ I+A GS PV   +++ D+ R++ ST AL+L+EVP++L+VVGGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  307  glEMACVYDALGSKVTVVELADRLMPGADADLVKVLRKRIDKRYDAIHLNTLVKELKPNK  366
            GLE++  Y  +G+KVT++E +D +++G+D+ L K +++++     ++  ++LV+      
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  367  KSITVKFEGKDAPESDRFDRVLLSVGRRPNTDLIGLEATGLKPNDQGYIDVDEYMRTGVS  426
              + V  +  +  E  + D  L+S+GR+PNT+ IGLE  G+  +DQG+I +++  +T + 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  427  HIHAIGDIVGQPMLAHKASHEGKVAAEVIAGEKSAWDARAIPSVAYTDPEVAWVGITEEE  486
            H+ AIGD  G  +LAHKAS E+K+AAEVI+G++S  D +A+P V ++DPEVA  G+TE E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  487  AKAQGIAYEKGAFPWAANGRSLSLNYQDGISKLLFDEQSGQLIGAGIVGPNagdliaeaa  546
            AK +G     + FP  AN+R+LS++  DG+ +++ + ++ +++G  +VGP+ + LIAEA 
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  547  lalemgaeaadIGLTVHPHPTLSETVAMAAEAAEGTLTDL  586
            +A+E GA+A D++LT+H+HPTL+E +  AAE+  G  T++
Sbjct  460  FAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

860) sucC in NC_021991


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

861) APA42C_07680 in NC_017150


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

862) APA01_07680 in NC_013209


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

863) APA03_07680 in NC_017100


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

864) APA07_07680 in NC_017121


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

865) APA12_07680 in NC_017108


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

866) APA22_07680 in NC_017125


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

867) APA26_07680 in NC_017146


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

868) APA32_07680 in NC_017111


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (781),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 7/462 (1%)

Query  117  DVVVIGAGPGGYVCAIRAAQLGFKVACVEQRATLGGTCLNVGCIPSKALLQSSENYHAAG  176
            D++VIGAG+GGYV AIRAAQLG KV  + ++A LGG CLN GCIPSKAL+ +SE      
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  177  HDFAAHGVVIDSVKLDLARMQARKADIVGANVKGVEYLFKKNGITWLKGHGKVEGT--GR  234
            H  +    V + V++D++ +  +K +IV     G+  L+K NG+  + G++ +  +  ++
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  235  LSVDGKP--VTAKHIVIASGSNSANLPGIEIDEKVIVTSTGALELSEVPKRlvvigggvi  292
            + +++     + K++++A GS + +L ++ +D+K I++ST AL+L EVP++LVV+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  293  glelgSVWGRLGADVTVVEFLDRLVPGTDNEVASQFQKLLVKQGFKMKLGHKVTKAEKTK  352
            GLELG+  +++GA VT++E  D +++GTD  ++   ++ L   G+ +  +  V  +E+T 
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  353  KGVVLTVEPSAGGAAETLEADVVLVAVGRTAASKNMGLEEAGIALDKRGRVEVDAHYTTS  412
              V + V+   +G  E ++ D  LV++GR + + ++GLE+ G+ LD +G + ++    T+
Sbjct  280  DEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTN  337

Query  413  VPGIYAIGDVIAGPMLAHKaeeegvalaellagqagHVNYDAIPGVIYTWPEVASVGFTE  472
            +  +YAIGD  +G +LAHKA  E+   AE+++GQ + ++++A+P VI++ PEVA  G+TE
Sbjct  338  IEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTE  397

Query  473  EQLKDKGVAYKIGKFPFMANGRARALGMTDGFVKVLADKQTDRVLGVHIIGPCAGELIAE  532
             + K+KG     ++FPF AN+RA +++ +DGFV+V+A+K+T RVLGV+++GP  + LIAE
Sbjct  398  KEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAE  457

Query  533  ATMAIEFGASAEDIGRVCHAHPTLSEAVKEAALGADNRAINI  574
            A  AIE GA+AED++   HAHPTL+E++ EAA G   +A ++
Sbjct  458  AVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

869) lpdA in NC_011985


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  210 bits (780),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 189/466 (41%), Positives = 308/466 (67%), Gaps = 8/466 (1%)

Query  4    DVIIIGTGPGGYVCAVKAAQLGLKVAVIEKRATYGGTCLNVGCIPSKALLHASEVFHHAG  63
            D+++IG+G+GGYV A++AAQLG KV +++K A  GG CLN GCIPSKAL+ ASE   H  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  64   HGMDALGVEVSAPT-LNLPKMMAHKDATVKSNVDGVAFLFKKNKIDTFQGTGKIVSAGKV  122
            H+ +++G+ VS+   +++P ++  KD+ V+   DG+  L+K N ++ + G + +  A   
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  123  SVTAEDGKVTEIEAKNIVIATGSDVAGIPGVPLEIDEKVIISSTGGIALDKVPENlvvvg  182
             +  ED     +  K++++A GS    + ++P+  D+K IISST ++ L+ VP++LVVVG
Sbjct  159  KIKIEDEEQI-FSYKDLILAIGSLPVELKSMPF--DQKRIISSTEALQLQEVPNHLVVVG  215

Query  183  ggviglelgsvWSRLGSKVTVVEYLDNILGGMDGEVSKQFQRMLAKQGITFHLGAKVVAV  242
            GG IGLELG+  +++G+KVT++E  D IL+G D  ++K  +R L   GIT   +A V + 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  243  EKSGKGAKVTFEPvkggdkvvldadvvlvSTGRKPYTAGLGLEEAGVALDNRGRVEIDGH  302
            E++G   +V  +   +G   +++ D  LVS GRKP T+ +GLE+ GV LD++G + I+  
Sbjct  276  ENTGDEVNVHVQ--VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  303  FKTNVPGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQAGHVNYDVIPSVVYTQPEVASV  362
             +TN+  +YAIGD   G +LAHKA  E+   AE+++GQ + ++++ +P V++++PEVA  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  363  GKTEEELKAAGIAYKVGKFPFSANGRARAMLATDGFVKILADKETDRVLGGHIVGFGAGE  422
            G TE E K  G     ++FPF AN+RA ++  +DGFV+++A+K+T RVLG ++VG   + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  423  MIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM  468
            +I E    +E G+++EDL+ T HAHPT++E++ EAA +    + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

870) Saro_1178 in NC_007794


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  208 bits (774),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 188/466 (41%), Positives = 297/466 (64%), Gaps = 13/466 (2%)

Query  7    DVLFIGAGPGGYVGAIRTAQLGLKTACAEGRETLGGTCLNVGCIPSKALLHGSEKFDEAR  66
            D+L IGAG+GGYV+AIR+AQLG K     ++  LGG CLN GCIPSKAL+ +SE+  + +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   NGTFASYGIK-TGAVELDLDAMQAQKADSVKSLTGGIEFLFKKNKVTWLKGYAAFEDAHT  125
            ++   + G+K +G V++D+  +   K + V+ LT+GI  L+K N V  + G A + +AH 
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  126  VTV----AGQKVTAKNIVIATGSSVTPLPGVTVDNDAGVIVDSTGALALNRVPQHlvvig  181
              +      Q  + K++++A GS    L ++  D+    I+ ST AL L+ VP+HLVV+G
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKR--IISSTEALQLQEVPNHLVVVG  215

Query  182  ggviglelgSVWRRLGAKVTVVEFLDQLLPGMDGDVRKEAAKIFKKQGMELKLGTKVTGV  241
            GG IGLELG+   ++GAKVT++E  D +L+G D  + K   + +K  G+ +  ++ V G 
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  242  AVNGGTATLTVEPSKGGEASTIEADCVLVAIGRRPNVDGLGLDKIGLELNARGQIETDHD  301
               G+   + V+    G    I+ D  LV+IGR+PN + +GL++IG+ L+ +G I  ++ 
Sbjct  276  ENTGDEVNVHVQVD--GKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  302  FATKIPGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPGVVYTMPEFAGV  361
              T+I  V AIGD   G +LAHKA  E+   AE I+G  ++++ + +P V+++ PE A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  362  GLTEEAAKERG-EIKVGKFPMLANSRAKTNHEPDGFVKVISDAKTDRVLGVWCIASVAGT  420
            GLTE  AKE+G E   ++FP  AN+RA +  ++DGFV+V+++ +T RVLGV  +++  ++
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  421  MIAQAAQAMEFGATSEDIAYTCHAHPTHSEALKEAAMAVTGKPIHM  466
            +IA+A  A+E GA +ED++ T HAHPT +E+L EAA +V G + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

871) lpdA in NC_009488


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  204 bits (760),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 189/470 (41%), Positives = 310/470 (66%), Gaps = 13/470 (2%)

Query  6    DLVVIgggpggytgairgAQLGMKVACVDNRNTLGGTCLNVGCIPSKFLLHASKKYEDIK  65
            DL+VIG+G+GGY +AIR+AQLG KV  + ++  LGG CLN GCIPSK L+ AS +  +IK
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVV-LVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  66   AGFDDLGINV-GATKLNLATMLNSKNKRVQELGNGISGLFKKNKVSHFIGTGKIINSHEI  124
             + + +G++V G  +++++ +++ K+  V+ L +GI  L+K N V  + G + + ++H  
Sbjct  100  HA-NTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIA  158

Query  125  SVQtssgsntsitniHAKNILIATGSEITTLPGIEIDEEYIVSSTGALSIKSVPKKMLVI  184
             ++     +        K++++A GS    L ++ +D+  I+SST AL ++ VP+ ++V+
Sbjct  159  KIKIEDEEQIFSY----KDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  185  GGGYIGLELGSVWRRLGADVTVVERSDRIASAMDNELGKLTQQALLKQGMKFKFNTKIIS  244
            GGGYIGLELG+   ++GA VT++E SD I S+ D  L K  ++ L   G+    ++ + +
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  245  AVVRNQTVDVILQSVNGDNMQEEKINVDVVLISVGRKPYVRNLGLENIGIKLDKQHSTIE  304
            +    + V+V +Q V+G   +EE I+ D  L+S+GRKP   ++GLENIG+ LD +++ I 
Sbjct  275  GENTGDEVNVHVQ-VDG---KEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLD-DQGFIK  329

Query  305  VDEKFTTNIKNIYAIGDVIKGPMLAHKAEEEAIAAVENMTGQAGHVNYNVMPSVIYTFPE  364
            +++K  TNI ++YAIGD   G +LAHKA  EA  A E ++GQ + ++++ MP VI++ PE
Sbjct  330  INNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPE  389

Query  365  VASVGYTEEQLKELGIQYVVGKFPFLANSRAKVIYNDVTGMVKILAHAKTDLILGVHIIG  424
            VA  G TE + KE G + V ++FPF AN+RA  + +D  G V+++A+ +T  +LGV+++G
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSV-SDADGFVQVVAEKNTKRVLGVQMVG  448

Query  425  PEAGTLIaeaavamefhaaaeDIARTCHAHPTLSEVFKEAALAVAKRSVN  474
            PE ++LIAEA  A+E  A AED++ T HAHPTL+E + EAA +V  ++ +
Sbjct  449  PEVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATH  498

872) pdhD in NC_014006


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  203 bits (754),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 192/466 (42%), Positives = 301/466 (65%), Gaps = 13/466 (2%)

Query  7    DVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHASELYEEAA  66
            D+LVIGAG+GGYVAAIRAAQLG K      +  LGG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   NGALAKLGVKID-KMSLDLDTMQGQRKDAVKGLTGGVEFLFKKNKVDWLKGLASFTGANT  125
            ++    +G+K+   + +D+  +   + + V+ LT+G+  L+K N V+ + G A +T A+ 
Sbjct  100  HAN--TMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI  157

Query  126  VQV----AGKTVTAKNIVIATGSSVTPLPGVQVDNEGGRIVDSTGALELDKvpghlvvvg  181
             ++      +  + K++++A GS    L ++  D+   RI+ ST AL+L+ VP HLVVVG
Sbjct  158  AKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQK--RIISSTEALQLQEVPNHLVVVG  215

Query  182  ggviglelgsvWRRVGAKVTVVEYLDQILPGMDGEVRKEANKIFKKQGFEYKLGTKVTGA  241
            GG IGLELG+   + GAKVT++E  D IL+G D  + K  ++ +K  G+    ++ V G+
Sbjct  216  GGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGG  275

Query  242  EVGKKGVTLTVEPAAGGAAEKIEADVVLVSIGRRPNTEGLGLDKIGLELNARGQIETDHD  301
            E  + G  + V+   +G  E I+ D  LVSIGR+PNT  +GL++IG+ L+ +G I  ++ 
Sbjct  276  E--NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  302  FATKVPGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTKPEIAGV  361
              T++  V AIGD   G +LAHKA  E+   AE I+G  ++++ + +P V+++ PE+A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  362  GLTEEAAKEKGAIKV-GKFPMLANSRAKTNHEPDGFVKIIADAETDKVLGVWIIATVAGT  420
            GLTE  AKEKG   V ++FP  AN+RA +  ++DGFV+++A+ +T +VLGV +++   ++
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  421  MIAQAAQAMEFGASSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHM  466
            +IA+A  A+E GA++ED++ T HAHPT +E++ EAA +V G + HM
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

873) K649_14900 in NC_021081


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  202 bits (750),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 186/456 (41%), Positives = 300/456 (66%), Gaps = 17/456 (3%)

Query  5    QLVVIGAGPGGYVAAIKAAQLGLDVACVEKEQALGGTCLRVGCIPSKALLDASEKIYAAQ  64
            +L+VIGAG+GGYVAAI+AAQLG  V  V+K + LGG CL  GCIPSKAL+ ASE++   +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNQIIGAKI-GQVELDLAALMAHKDKVVKANTGGVEYLFKKNKVT-----RYLGHGTILT  118
            H + +G K+ G+V++D++ ++  KD +V+  T+G+  L+K N V       YL ++ I  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI--  157

Query  119  PNKVRVEGPEGVQELETERILIATGSKVAPLKGVQLDYEIVGTSDQAIAYPSVPERlvvi  178
              K+++E+ E  Q +    +++A GS    LK++ +D   + +S +A+    VP++LVV+
Sbjct  158  -AKIKIEDEE--QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  179  gggviglelgSVWNRLGAKVTVLEYLPHILGGMDSEVARAAEKIFKKQGLDIRTGVRVTA  238
            GGG IGLELG+   ++GAKVT+LE    IL+G D+ ++++  + +K  G+ + T+  V +
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  239  AYARDGKGV---VEYEGGEPLVA-DRVLLATGRIPNTDGLGLENVGLRTDERGRIPVNAH  294
            +    G  V   V+ +G E ++  D  L++ GR PNT+ +GLEN+G+  D++G I +N  
Sbjct  275  G-ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  295  YQTAVPNIFAIGDVIAGPMLAHKAEEEGYAAVEYMVTGYGHVDYNAIPNVVYTHPEIASV  354
             QT + +++AIGD  +G +LAHKA  E+  A E +    + +D++A+P V++++PE+A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  355  GKTEEELKSAGIPYKKGSFPFSANGRARAMNDTDGFAKILAHAETDRILGVHIIGPRagd  414
            G TE E K  G     + FPF AN+RA +++D+DGF +++A+ +T R+LGV+++GP  + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  415  liaeaavaiafhaSSEDLARASHAHPTLAEVLKEAA  450
            LIAEA  AI   A++EDL+ + HAHPTL+E L EAA
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

874) Mrub_1532 in NC_013946


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  202 bits (750),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 186/456 (41%), Positives = 300/456 (66%), Gaps = 17/456 (3%)

Query  5    QLVVIGAGPGGYVAAIKAAQLGLDVACVEKEQALGGTCLRVGCIPSKALLDASEKIYAAQ  64
            +L+VIGAG+GGYVAAI+AAQLG  V  V+K + LGG CL  GCIPSKAL+ ASE++   +
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKAE-LGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   HNQIIGAKI-GQVELDLAALMAHKDKVVKANTGGVEYLFKKNKVT-----RYLGHGTILT  118
            H + +G K+ G+V++D++ ++  KD +V+  T+G+  L+K N V       YL ++ I  
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHI--  157

Query  119  PNKVRVEGPEGVQELETERILIATGSKVAPLKGVQLDYEIVGTSDQAIAYPSVPERlvvi  178
              K+++E+ E  Q +    +++A GS    LK++ +D   + +S +A+    VP++LVV+
Sbjct  158  -AKIKIEDEE--QIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVV  214

Query  179  gggviglelgSVWNRLGAKVTVLEYLPHILGGMDSEVARAAEKIFKKQGLDIRTGVRVTA  238
            GGG IGLELG+   ++GAKVT+LE    IL+G D+ ++++  + +K  G+ + T+  V +
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  239  AYARDGKGV---VEYEGGEPLVA-DRVLLATGRIPNTDGLGLENVGLRTDERGRIPVNAH  294
            +    G  V   V+ +G E ++  D  L++ GR PNT+ +GLEN+G+  D++G I +N  
Sbjct  275  G-ENTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNK  333

Query  295  YQTAVPNIFAIGDVIAGPMLAHKAEEEGYAAVEYMVTGYGHVDYNAIPNVVYTHPEIASV  354
             QT + +++AIGD  +G +LAHKA  E+  A E +    + +D++A+P V++++PE+A  
Sbjct  334  CQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYT  393

Query  355  GKTEEELKSAGIPYKKGSFPFSANGRARAMNDTDGFAKILAHAETDRILGVHIIGPRagd  414
            G TE E K  G     + FPF AN+RA +++D+DGF +++A+ +T R+LGV+++GP  + 
Sbjct  394  GLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSS  453

Query  415  liaeaavaiafhaSSEDLARASHAHPTLAEVLKEAA  450
            LIAEA  AI   A++EDL+ + HAHPTL+E L EAA
Sbjct  454  LIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

875) lpdA in NC_016621


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  195 bits (723),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 186/460 (41%), Positives = 306/460 (67%), Gaps = 13/460 (2%)

Query  5    DVVVIGSGPGGYVSAIRSSQLGLRTAIIEKHQELGGTCLNVGCIPsksllysskyflfAK  64
            D++VIG+G+GGYV+AIR++QLG +  +++K  ELGG CLN GCIPSK+L+ +S      K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDK-AELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   KEHYLHGIFYEKLSLDFEkmmkrknniikkTNEGVKYLIKKNKIDLYQGIASFKTNHSLS  124
              + +       + +D   ++K+K+ I++K  +G++ L+K N +++  G A +   H   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH---  156

Query  125  IIDKKYLKEITKIKFQYC--IIATGSKPTCLPSLNFDIQKRIISSTEALSLKEIPKRlii  182
             I K  + +  +I F Y   I+A GS P  L S+ FD QKRIISSTEAL L+E+P++L++
Sbjct  157  -IAKIKIEDEEQI-FSYKDLILAIGSLPVELKSMPFD-QKRIISSTEALQLQEVPNHLVV  213

Query  183  igggiiglelgSIYHRLGSRVTIIETMDKIISNMDHSLSKEIQKILEKSSIQIENSLLIN  242
            +GGG IGLELG+ Y ++G++VTI+E  D I+S  D  L+K +++ L   +I +    L++
Sbjct  214  VGGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQ  273

Query  243  NIKILENTKEISVHVKKNNGKEMKYIGDYCLLSIGRYPNTKYLGLDNIGIKKDKNGFILV  302
                 +   E++VHV+  +GKE     DYCL+SIGR PNT  +GL+NIG+  D +GFI +
Sbjct  274  GGE--NTGDEVNVHVQ-VDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKI  330

Query  303  NDFLQSSINNIYAIGDVIGGKMLAHKAEEEGLYVSEYLSGQKPNKINYNLVPSVIYTYPE  362
            N+  Q++I+++YAIGD  GG +LAHKA  E+   +E +SGQ++  I+++ +P VI++ PE
Sbjct  331  NNKCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSV-IDFQAMPFVIFSDPE  389

Query  363  ISSVgktekkikeegieynigiFPMKSLGISQASGCTSGFIKILSHKKTDEILGVHMIGE  422
            ++  G TEK  KE G E   + FP ++ + + + + + GF++++++K+T  +LGV+M+G 
Sbjct  390  VAYTGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGP  449

Query  423  HVTDMIMEATVAMEFHASSEDIYRICHPHPTFSESIKEAA  462
            +V+ +I EA  A+E  A++ED+    H+HPT++E++ EAA
Sbjct  450  EVSSLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAA  489

876) Sphch_1350 in NC_015593


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  191 bits (708),  Expect = 9e-50, Method: Compositional matrix adjust.
 Identities = 194/467 (42%), Positives = 303/467 (65%), Gaps = 15/467 (3%)

Query  7    DVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHASELYEEAA  66
            D+LVIGAG+GGYVAAIRAAQLG K      +  LGG CLN GCIPSKAL+ ASE   +  
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLG-KKVVLVDKAELGGVCLNRGCIPSKALISASERVKHIK  99

Query  67   NGALAKLGVKIDKMSLDLDTMQVQR-KDA-VKGLTGGVEFLFKKNKVDWLKGLATFTGAN  124
            ++    +G+K+    +++D  +V + KD+ V+ LT+G+  L+K N V+ + G A +T A+
Sbjct  100  HAN--TMGLKVSG-EVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAH  156

Query  125  TVQV----AGKTVTAKNIVIATGSSVTPLPGVQVDNEGGRIVDSTGALELDKvpghlvvv  180
              ++      +  + K++++A GS    L ++  D+   RI+ ST AL+L+ VP HLVVV
Sbjct  157  IAKIKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQK--RIISSTEALQLQEVPNHLVVV  214

Query  181  gggviglelgsvWRRVGAKVTVVEFLDQILPGMDGEVRKEANKIFKKQGFEYKLGTKVTG  240
            GGG IGLELG+   + GAKVT++E  D IL+G D  + K  ++ +K  G+    ++ V G
Sbjct  215  GGGYIGLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQG  274

Query  241  AEVGKKGVTLTVEPAAGGEAEKIEADVVLVSIGRRPNTEGLGLDKIGLELNARGQIETDH  300
            +E  + G  + V+   +G  E I+ D  LVSIGR+PNT  +GL++IG+ L+ +G I  ++
Sbjct  275  GE--NTGDEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINN  332

Query  301  DFATKVPGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTKPEIAG  360
               T++  V AIGD   G +LAHKA  E+   AE I+G  ++++ + +P V+++ PE+A 
Sbjct  333  KCQTNIEHVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAY  392

Query  361  VGLTeeaakekg-avkvgkFPMMANSRAKTNHEPDGFVKIIADAETDKVLGVWIIATVAG  419
             GLTE  AKEKG     ++FP  AN+RA +  ++DGFV+++A+ +T +VLGV +++   +
Sbjct  393  TGLTEKEAKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVS  452

Query  420  TMIAQAAQAMEFGASSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHM  466
            ++IA+A  A+E GA++ED++ T HAHPT +E++ EAA +V G + HM
Sbjct  453  SLIAEAVFAIEAGANAEDLSLTIHAHPTLPEPLMEAAEGVMGHATHM  499

877) Mesil_1945 in NC_014212


> NC_004461_R1|55|G55|27466995|NP_763632.1|Staphylococcus_epidermidis_ATCC_12228|+|45738..47252|-|SE0077|dihydrolipoamide 
dehydrogenase 
component of pyruvate dehydrogenase E3
Length=504

 Score =  187 bits (695),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 181/441 (42%), Positives = 287/441 (66%), Gaps = 6/441 (1%)

Query  5    QVVVIGAGPGGYVAAIRAAQLGLDVACVEKERALGGTCLRVGCIPSKALLEASERFYAAK  64
            +++VIGAG+GGYVAAIRAAQLG  V  V+K   LGG CL  GCIPSKAL+ ASER    K
Sbjct  41   DLLVIGAGSGGYVAAIRAAQLGKKVVLVDKA-ELGGVCLNRGCIPSKALISASERVKHIK  99

Query  65   EGKLVGVKL-GEVQLDLAAMMAHKDKVVKASTDGIDFLFKKNKVTRYLGHGRIVGPNRvv  123
            +++ +G+K+ GEVQ+D++ ++  KD +V+  TDGI  L+K N V    G++ +  ++   
Sbjct  100  HANTMGLKVSGEVQVDMPEVVKWKDGIVNKLTDGIRTLLKGNGVEVISGEAYLTEAHIAK  159

Query  124  vegpegttelettYIIVATGSKVAMLPGVEVDYQTIVTSDQAIAFDRVPQSllvigggvi  183
            +   +    +    +I+A GS    L ++  D + I++S +A+ ++ VP+ L+V+GGG I
Sbjct  160  IKIEDEEQIFSYKDLILAIGSLPVELKSMPFDQKRIISSTEALQLQEVPNHLVVVGGGYI  219

Query  184  glelgSVWHRLGAKVTVLEYLPRILGGMDGELSKTAERIFKKQGLDIRTGMKVTRgyvkd  243
            GLELG+   ++GAKVT+LE    IL+G D  L+KT  R +K  G+ + T+  V  G   +
Sbjct  220  GLELGTAYAKFGAKVTILEGSDTILSGTDPILTKTVKRHLKEIGITVITDALVQGGENTG  279

Query  244  gkgvvevetgetfvaeKV---LLAASRIPNTDGLGLESVGISLE-QGRIPINAHWQTQVP  299
            +   V+V+ +      +    L++ +R PNT+ +GLE++G+ L+ QG I IN   QT++ 
Sbjct  280  DEVNVHVQVDGKEEIIQCDYCLVSIGRKPNTGKIGLENIGVVLDDQGFIKINNKCQTNIE  339

Query  300  NIYAIGDVVLGPMLAHKAEEEGVAVAEYIATGYGHVDYGSIPNVVYTHPEIASVGKSEEE  359
            ++YAIGD   G +LAHKA  E+   AE I+   + +D+ ++P V++++PE+A  G +E E
Sbjct  340  HVYAIGDCAGGDLLAHKASYEAKIAAEVISGQNSVIDFQAMPFVIFSDPEVAYTGLTEKE  399

Query  360  LKAEGVPYKKGSFPFSANGRARAINDTEGFVKVLAHAETDRVLGVHIIGPHAGDLIAEAA  419
             K  G     + FPF AN+RA +++D++GFV+V+A+ +T RVLGV+++GP+ + LIAEA 
Sbjct  400  AKEKGYETVSSRFPFQANARALSVSDADGFVQVVAEKNTKRVLGVQMVGPEVSSLIAEAV  459

Query  420  VAMAFKASAEDIGRASHAHPT  440
             A+   A+AED++ + HAHPT
Sbjct  460  FAIEAGANAEDLSLTIHAHPT  480