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PAthogenisity Island DataBase (PAI DB)

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Homologs of STY4577 gene of NC_003198_P9

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) STY4577
( NP_458662.1 )

hypothetical protein

NC_003198
(Salmonella enterica CT18)

0.0

100

2) t4274
( NP_807872.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

0.0

100

3) STBHUCCB_45280
( YP_005219946.1 )

Conserved uncharacterized protein

NC_016832
(Salmonella enterica P-stx-12)

0.0

100

4) SPC_4431
( YP_002639925.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

0.0

100

5) TY21A_21765
( YP_007928513.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

9e-174

6) Ser39006_1514
( YP_008521896.1 )

integrating conjugative element protein, PFL_4711 family

NC_022268
(Serratia sp. ATCC 39006)

8e-142

7) ECED1_3556
( YP_002399415.1 )

hypothetical protein

NC_011745
(Escherichia coli ED1a)

2e-137

8) PANA5342_3967
( YP_005197397.1 )

hypothetical protein

NC_016816
(Pantoea ananatis LMG 5342)

1e-136

9) PAGR_g3836
( YP_005994544.1 )

integrating conjugative element protein

NC_017554
(Pantoea ananatis PA13)

1e-136

10) ECL_00450
( YP_003610965.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-134

11) CFSAN002050_22245
( YP_008262316.1 )

integrating conjugative element protein

NC_021818
(Salmonella enterica CFSAN002050)

5e-134

12) YE3466
( YP_001007627.1 )

hypothetical protein

NC_008800
(Yersinia enterocolitica 8081)

9e-132

13) plu1088
( NP_928413.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

1e-130

14) YpsIP31758_3700
( YP_001402654.1 )

hypothetical protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-130

15) W5S_3485
( YP_006284427.1 )

Membrane protein, Tfp pilus assembly, pilus retraction ATPase PilT

NC_017845
(Pectobacterium sp. SCC3193)

3e-130

16) Pecwa_0680
( YP_003258108.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

4e-130

17) EPYR_03261
( YP_005804012.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-128

18) EpC_30220
( YP_002650003.1 )

hypothetical protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-128

19) SPAB_05392
( YP_001591498.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-127

20) EAM_2854
( YP_003539921.1 )

hypothetical protein

NC_013971
(Erwinia amylovora ATCC 49946)

6e-128

21) EAMY_0572
( YP_003529930.1 )

hypothetical protein

NC_013961
(Erwinia amylovora CFBP1430)

6e-128

22) ECA0578
( YP_048694.1 )

hypothetical protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

3e-127

23) XBJ1_1496
( YP_003467409.1 )

hypothetical protein

NC_013892
(Xenorhabdus bovienii SS-2004)

4e-127

24) EbC_pEb10200450
( YP_003739102.1 )

hypothetical protein

NC_014304
(Erwinia billingiae Eb661)

2e-126

25) XNC1_3472
( YP_003713626.1 )

hypothetical protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

4e-126

26) Spro_4163
( YP_001480385.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

1e-125

27) Spro_0350
( YP_001476588.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

1e-124

28) NT01EI_0354
( YP_002931831.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

2e-123

29) PAJ_2508
( YP_005935384.1 )

integrating conjugative element protein

NC_017531
(Pantoea ananatis AJ13355)

4e-123

30) XNC1_3574
( YP_003713714.1 )

hypothetical protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

4e-123

31) UMNK88_5045
( YP_006136684.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

2e-122

32) SerAS9_0301
( YP_004503724.1 )

integrating conjugative element protein

NC_015567
(Serratia plymuthica AS9)

2e-122

33) SerAS12_0301
( YP_004498772.1 )

integrating conjugative element protein

NC_015566
(Serratia sp. AS12)

2e-122

34) SerAS13_0300
( YP_006023187.1 )

integrating conjugative element protein

NC_017573
(Serratia sp. AS13)

2e-122

35) PMI2572
( YP_002152291.1 )

hypothetical protein

NC_010554
(Proteus mirabilis HI4320)

5e-122

36) Spro_4073
( YP_001480296.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

3e-120

37) YPZ3_0323
( YP_003566495.1 )

hypothetical protein

NC_014029
(Yersinia pestis Z176003)

4e-120

38) LF82_693
( YP_002559031.1 )

hypothetical protein

NC_011993
(Escherichia coli LF82)

6e-116

39) NRG857_20935
( YP_006122529.1 )

hypothetical protein

NC_017634
(Escherichia coli NRG 857C)

6e-116

40) KPHS_44890
( YP_005228789.1 )

hypothetical protein

NC_016845
(Klebsiella pneumoniae HS11286)

8e-114

41) N559_0816
( YP_008423886.1 )

integrating conjugative element protein, PFL_4711 family

NC_022082
(Klebsiella pneumoniae JM45)

1e-113

42) CKO_03489
( YP_001455005.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

7e-80

43) XCAW_01694
( YP_007649689.1 )

Hypothetical Protein

NC_020815
(Xanthomonas citri Aw12879)

3e-78

44) Tola_2449
( YP_002893630.1 )

hypothetical protein

NC_012691
(Tolumonas auensis DSM 9187)

2e-77

45) XC_1041
( YP_242132.1 )

hypothetical protein

NC_007086
(Xanthomonas campestris 8004)

3e-77

46) XCC3116
( NP_638463.1 )

hypothetical protein

NC_003902
(Xanthomonas campestris ATCC 33913)

3e-77

47) W5S_1485
( YP_006282451.1 )

Membrane protein, Tfp pilus assembly, pilus retraction ATPase PilT

NC_017845
(Pectobacterium sp. SCC3193)

3e-77

48) Pecwa_1620
( YP_003259017.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

6e-77

49) SARI_03143
( YP_001572125.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

4e-76

50) Bpet1503
( YP_001630110.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

8e-76

51) xccb100_2458
( YP_001903863.1 )

hypothetical protein

NC_010688
(Xanthomonas campestris B100)

2e-75

52) Bpet1376
( YP_001629981.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

2e-75

53) XC_2026
( YP_243107.1 )

hypothetical protein

NC_007086
(Xanthomonas campestris 8004)

4e-75

54) Alide_4032
( YP_004128625.1 )

integrating conjugative element protein, pfl4711

NC_014910
(Alicycliphilus denitrificans BC)

1e-74

55) NH44784_010371
( YP_008028137.1 )

FIG00715740: hypothetical protein

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

6e-74

56) PSTAB_2491
( YP_004714861.1 )

hypothetical protein

NC_015740
(Pseudomonas stutzeri ATCC 17588)

6e-74

57) Ajs_1393
( YP_985684.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

4e-73

58) XCV2362
( YP_364093.1 )

hypothetical protein

NC_007508
(Xanthomonas campestris 85-10)

4e-73

59) ST548_p5017
( YP_007389581.1 )

Tfp pilus assembly protein, pilus retraction ATPase PilT

NC_020181
(Enterobacter aerogenes EA1509E)

6e-73

60) A79E_4493
( YP_006638252.1 )

hypothetical protein

NC_018522
(Klebsiella pneumoniae 1084)

2e-72

61) KP1_0594
( YP_002917522.1 )

hypothetical protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

2e-72

62) HEAR2025
( YP_001100292.1 )

signal peptide

NC_009138
(Herminiimonas arsenicoxydans )

2e-72

63) Rmet_2358
( YP_584504.1 )

hypothetical protein

NC_007973
(Cupriavidus metallidurans CH34)

5e-70

64) Bpet4260
( YP_001632876.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

2e-69

65) Daci_4184
( YP_001565200.1 )

hypothetical protein

NC_010002
(Delftia acidovorans SPH-1)

2e-69

66) Dd1591_0430
( YP_003002796.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

3e-69

67) NCGM2_1406
( YP_005979657.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

3e-69

68) PSTAA_1244
( YP_005937896.1 )

hypothetical protein

NC_017532
(Pseudomonas stutzeri DSM 4166)

3e-69

69) AXYL_01111
( YP_003977170.1 )

hypothetical protein

NC_014640
(Achromobacter xylosoxidans A8)

4e-69

70) PLES_26481
( YP_002440241.1 )

hypothetical protein

NC_011770
(Pseudomonas aeruginosa LESB58)

2e-68

71) Plav_3429
( YP_001414689.1 )

hypothetical protein

NC_009719
(Parvibaculum lavamentivorans DS-1)

5e-68

72) Ajs_1251
( YP_985551.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

5e-66

73) PADK2_11945
( YP_006482374.1 )

hypothetical protein

NC_018080
(Pseudomonas aeruginosa DK2)

5e-66

74) NH44784_009421
( YP_008028043.1 )

FIG00959181: hypothetical protein

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

1e-65

75) SMD_1511
( YP_006184243.1 )

hypothetical protein

NC_017671
(Stenotrophomonas maltophilia D457)

1e-65

76) TMO_c0032
( YP_006373624.1 )

hypothetical protein

NC_017958
(Tistrella mobilis KA081020-065)

1e-65

77) T1E_4196
( YP_006534819.1 )

hypothetical protein

NC_018220
(Pseudomonas putida DOT-T1E)

1e-58

78) Pput_2954
( YP_001268266.1 )

hypothetical protein

NC_009512
(Pseudomonas putida F1)

1e-58

79) ebA2397
( YP_158364.1 )

hypothetical protein

NC_006513
(Aromatoleum aromaticum EbN1)

6e-57

• Sequence Alignments

1) STY4577 in NC_003198


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  711 bits (2691),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 476/476 (100%), Positives = 476/476 (100%), Gaps = 0/476 (0%)

Query  1    MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVIST  60
            MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVIST
Sbjct  1    MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVIST  60

Query  61   PGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSM  120
            PGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSM
Sbjct  61   PGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSM  120

Query  121  PAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREE  180
            PAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREE
Sbjct  121  PAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREE  180

Query  181  YKEAVSASGGDALRAEEARTKASGKEGATWVggkkaggkgQPAIQPTRDLAKAGYnmmnn  240
            YKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNN
Sbjct  181  YKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNN  240

Query  241  lsvtsnstvsAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQG  300
            LSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQG
Sbjct  241  LSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQG  300

Query  301  TTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDP  360
            TTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDP
Sbjct  301  TTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDP  360

Query  361  DAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELN  420
            DAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELN
Sbjct  361  DAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELN  420

Query  421  SLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  476
            SLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ
Sbjct  421  SLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  476

2) t4274 in NC_004631


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  711 bits (2691),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 476/476 (100%), Positives = 476/476 (100%), Gaps = 0/476 (0%)

Query  1    MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVIST  60
            MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVIST
Sbjct  1    MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVIST  60

Query  61   PGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSM  120
            PGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSM
Sbjct  61   PGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSM  120

Query  121  PAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREE  180
            PAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREE
Sbjct  121  PAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREE  180

Query  181  YKEAVSASGGDALRAEEARTKASGKEGATWVggkkaggkgQPAIQPTRDLAKAGYnmmnn  240
            YKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNN
Sbjct  181  YKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNN  240

Query  241  lsvtsnstvsAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQG  300
            LSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQG
Sbjct  241  LSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQG  300

Query  301  TTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDP  360
            TTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDP
Sbjct  301  TTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDP  360

Query  361  DAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELN  420
            DAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELN
Sbjct  361  DAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELN  420

Query  421  SLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  476
            SLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ
Sbjct  421  SLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  476

3) SPC_4431 in NC_012125


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  692 bits (2618),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 465/465 (100%), Positives = 465/465 (100%), Gaps = 0/465 (0%)

Query  1    MLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIG  60
            MLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIG
Sbjct  12   MLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIG  71

Query  61   LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPG  120
            LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPG
Sbjct  72   LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPG  131

Query  121  LYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGD  180
            LYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGD
Sbjct  132  LYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGD  191

Query  181  ALRAEEARTKASGKEGATWVggkkaggkgQPAIQPTRDLAKAGYnmmnnlsvtsnstvsA  240
            ALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSA
Sbjct  192  ALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSA  251

Query  241  GSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPM  300
            GSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPM
Sbjct  252  GSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPM  311

Query  301  LEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAG  360
            LEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAG
Sbjct  312  LEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAG  371

Query  361  ELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRRE  420
            ELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRRE
Sbjct  372  ELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRRE  431

Query  421  VAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  465
            VAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ
Sbjct  432  VAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  476

4) STBHUCCB_45280 in NC_016832


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  692 bits (2618),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 465/465 (100%), Positives = 465/465 (100%), Gaps = 0/465 (0%)

Query  1    MLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIG  60
            MLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIG
Sbjct  12   MLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIG  71

Query  61   LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPG  120
            LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPG
Sbjct  72   LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPG  131

Query  121  LYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGD  180
            LYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGD
Sbjct  132  LYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGD  191

Query  181  ALRAEEARTKASGKEGATWVggkkaggkgQPAIQPTRDLAKAGYnmmnnlsvtsnstvsA  240
            ALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSA
Sbjct  192  ALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSA  251

Query  241  GSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPM  300
            GSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPM
Sbjct  252  GSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPM  311

Query  301  LEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAG  360
            LEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAG
Sbjct  312  LEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAG  371

Query  361  ELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRRE  420
            ELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRRE
Sbjct  372  ELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRRE  431

Query  421  VAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  465
            VAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ
Sbjct  432  VAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  476

5) TY21A_21765 in NC_021176


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  602 bits (2276),  Expect = 9e-174, Method: Compositional matrix adjust.
 Identities = 409/410 (99%), Positives = 410/410 (100%), Gaps = 0/410 (0%)

Query  1    MKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQ  60
            MKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQ
Sbjct  67   MKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQ  126

Query  61   RANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVS  120
            RANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVS
Sbjct  127  RANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVS  186

Query  121  ASGGDALRAEEARTKASGKEGATWVggkkaggkgQPAIQPTRDLAKAGYnmmnnlsvtsn  180
            ASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSN
Sbjct  187  ASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSN  246

Query  181  stvsAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGT  240
            STVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGT
Sbjct  247  STVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGT  306

Query  241  GFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALV  300
            GFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALV
Sbjct  307  GFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALV  366

Query  301  QRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEM  360
            QRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEM
Sbjct  367  QRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEM  426

Query  361  ELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKSGDSQ  410
            ELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRK+GDSQ
Sbjct  427  ELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDSQ  476

6) Ser39006_1514 in NC_022268


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  497 bits (1873),  Expect = 8e-142, Method: Compositional matrix adjust.
 Identities = 299/440 (68%), Positives = 384/440 (88%), Gaps = 3/440 (0%)

Query  36   GVSANGAISDGLFYSIGGGSVISPPASRNSMTRLGMSGGLSSDLMCGNFDIKTTVGNQLN  95
            G S NGA+SD LFYSIGGGSVIS P++  +M R+G+ +GLSSDLMCGNFDIKTTVGNQLN
Sbjct  37   GKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLN  96

Query  96   GVTSGFKDLMGTVIQGATGAVASMPAMVIQRANPGLYEMLTNGVLQAGLSFDKAKLNCQN  155
            GVT+GFKDLMG VI GATGAV+SMPAM++QRANPGLYEM+TNGVLQAGL+FDK+KLNC++
Sbjct  97   GVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCES  156

Query  156  LANKMADYTMGNK--WTQAAVTEEYKNIvassdgdavssdQKLQKATGEDGATWIGGQKR  213
            +ANK+ADYT+G+K  WT++AV EEYK+ V++S+GDA+ +++   KA+G +GATW+GG+K 
Sbjct  157  MANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKA  216

Query  214  GGKGQPSIKPTHDLAKAGYNMMNNLPVTSNSTVGASSCNGSVCQRYSNSEDAAAAVVKVL  273
            GGKGQP+I+PT+DLAKAGYNMMNNL+VTSNSTV+A+SC+GS CQ++ NSE+AAAAVVKVL
Sbjct  217  GGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVL  276

Query  274  GDRSIRTCREASECGSGGDENAAGSTVAGTGFSPMLEDATKENLEQLDKLVGGSEAPTAD  333
            GDRSIRTC++A+ECGSGG +NA G+T+AGTGF+PMLED+TKENLEQL KLV G+EAPT  
Sbjct  277  GDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQA  336

Query  334  NLAKLKTGSLVVTRGVIQSLKDDPDSAALVQRLAGELAMSDTVEQALTMRRMLTTGQSEP  393
            NL K+K+GSL VTRGVI++LK DPD++ALVQRLAGELAMSDT+E +L+MRRMLTTGQSEP
Sbjct  337  NLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEP  396

Query  394  NAADQPEALAEGDRRIDALDRELAALSNEMALRKSISNNSLLTTLERQGARNQDSRLQQH  453
            NAADQP+A+AE+DRRI+ALDREL +L  EM LR+ +++N+ L  + R+  R+  +  ++ 
Sbjct  397  NAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKES  456

Query  454  SGSQDQGFSSM-SQKSGEQQ  472
              + D  +S + ++K+G+ Q
Sbjct  457  QTNADTRLSELETRKPGDSQ  476

7) ECED1_3556 in NC_011745


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  482 bits (1819),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 275/455 (61%), Positives = 378/455 (84%), Gaps = 4/455 (0%)

Query  37   STPVMADSILSLPKLNDSTFGYGKSVDGAVSDKLFYTLGGGSVISQPATRSNMQKLGLDL  96
            S+  ++ ++L  P L++   GYGKSV+GAVSDKLFY++GGGSVIS P+T   M+++GLD 
Sbjct  17   SSGPLSAALLDAPTLSGD--GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDA  74

Query  97   GWSSDLMCGNFDLKTTVGNQLNGITDGFKNLMGDVIQGASGAVASLPAMVIQRANPGLYD  156
            G SSDLMCGNFD+KTTVGNQLNG+T+GFK+LMGDVI GA+GAV+S+PAM++QRANPGLY+
Sbjct  75   GLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYE  134

Query  157  MLTNGVLQANVAFDKAQLNCQNMAKRMMDFS--DRSKWTQAAMMEEYKKVVNTSDGDAVK  214
            M+TNGVLQA +AFDK++LNC++MA+++ D++  D+S WT++A+ EEYK  V++S+GDA++
Sbjct  135  MITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALR  194

Query  215  GDDAGRQATGKEGQKWIggqqrggagqPAIRPVHDMTAAGFNMMNSLPVTSTSGVGAGSC  274
            +++A  +A+GKEG  W+GG++ GG GQPAI+P +D++ AG+NMMN+L+VTS S V+AGSC
Sbjct  195  AEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSC  254

Query  275  NGSACEKFRNAEEAASAVVKVLGDRSMRTCTDAKECTSGDSDQQPGTAVAGTGFSPMLEE  334
            +GSAC+KF+N+EEAA+AVVKVLGDRS+RTC DA EC SG+ D+  GT++AGTGF+PMLE+
Sbjct  255  KGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLED  314

Query  335  ATRINTEQLVRLVNGQDKPTAENLAKLKTGSLAVSAGVIHALRRDPDNMSLTSRLAGELA  394
            +T+ N EQLV+LVNG + PT  NL K+K+GSL V+ GVI+AL+RDPD  +L  RLAGELA
Sbjct  315  TTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELA  374

Query  395  MADTVETALVMRRMLLTGMSEPYAAAQPAALEEGDRRIASLDREIIALKSEMELKRDLAR  454
            M+DT+ET+L MRRML TG SEP AA QP A+ E+DRRI +LDRE+ +LK EMEL+R++A+
Sbjct  375  MSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAK  434

Query  455  NSVLTIIERDNERVSNNPMIQQTDNADSRVRSLEV  489
            N+ L ++ R+++R   NP  +   NAD+R+  LE 
Sbjct  435  NTALVVVAREENRSVTNPQKESQTNADTRLSELET  469

8) PAGR_g3836 in NC_017554


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  479 bits (1807),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 294/447 (66%), Positives = 380/447 (86%), Gaps = 4/447 (0%)

Query  29   TTLSSQGAG--VSGAINDGLFYsigggsvisppsTRSNMSRLGLDGGWSSDLMCGNFDLK  86
             TLS++G G  V+GA++D LFYSIGGGSVIS P+T   M R+GLD+G SSDLMCGNFD+K
Sbjct  29   PTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIK  88

Query  87   TTVGNQLNGITSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLNFD  146
            TTVGNQLNG+T+GFKDLMG+VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAGL FD
Sbjct  89   TTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFD  148

Query  147  KAQLNCQNMSKKLADYTLGSK--WQQAAVSEEYKDIVASSGGDAVSSDQKLQKATGEEGV  204
            K++LNC++M++KLADYTLG K  W ++AV EEYK+ V++SGGDA+ +++   KA+G EG 
Sbjct  149  KSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGA  208

Query  205  TWVGGQKRGGKGQPAIQPTRDLAKAGYNMMNSLPVNSNSSVGSASCNGTVCQRYKSSDEA  264
            TWVGG+K GGKGQPAIQPTRDLAKAGYNMMN+L+V SNS+V+++SC+G+ CQ++K+S+EA
Sbjct  209  TWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEA  268

Query  265  AAAVVKVLGDRSIRTCRETSECTSGGADNQPGSTVAGTGFSPVLEDATKTNLEQLSKLVN  324
            AAAVVKVLGDRSIRTC++++EC SGG DN  G+T+AGTGF+P+LED+TK NLEQL KLVN
Sbjct  269  AAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVN  328

Query  325  GQLQPTADNLAALKTGSLVVTRGVIQALRDDPDRAALVQRLAGELAMSDTVEAALTMRRM  384
            G   PT  NL  +K+GSL VTRGVI+AL+ DPD +ALVQRLAGELAMSDT+E++L+MRRM
Sbjct  329  GTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRM  388

Query  385  LTTGESEPNAAEQPEAIAEGDRRVDALDRELNALRNEMELRKSISSNSLLTTLERQGERN  444
            LTTG+SEPNAA+QP+A+AE+DRR++ALDRELN+L+ EMELR+ ++ N+ L  + R+ +R+
Sbjct  389  LTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRS  448

Query  445  QDNQLQQKTGNQDQGFSQMSQPQPGGN  471
              N  ++   N D  +S++   +PG++
Sbjct  449  VTNPQKESQTNADTRLSELETRKPGDS  475

9) PANA5342_3967 in NC_016816


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  479 bits (1807),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 293/445 (66%), Positives = 379/445 (86%), Gaps = 4/445 (0%)

Query  29   TTLSSQGAG--VSGAINDGLFYsigggsvisppsTRSNMSRLGLDGGWSSDLMCGNFDLK  86
             TLS++G G  V+GA++D LFYSIGGGSVIS P+T   M R+GLD+G SSDLMCGNFD+K
Sbjct  29   PTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIK  88

Query  87   TTVGNQLNGITSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLNFD  146
            TTVGNQLNG+T+GFKDLMG+VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAGL FD
Sbjct  89   TTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFD  148

Query  147  KAQLNCQNMSKKLADYTLGSK--WQQAAVSEEYKDIVASSGGDAVSSDQKLQKATGEEGV  204
            K++LNC++M++KLADYTLG K  W ++AV EEYK+ V++SGGDA+ +++   KA+G EG 
Sbjct  149  KSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGA  208

Query  205  TWVGGQKRGGKGQPAIQPTRDLAKAGYNMMTSLPVTSNSSVGSASCNGTVCQRYKSSDEA  264
            TWVGG+K GGKGQPAIQPTRDLAKAGYNMM +L+VTSNS+V+++SC+G+ CQ++K+S+EA
Sbjct  209  TWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEA  268

Query  265  AAAVVKVLGDRSIRTCRETSECTSGGADNQPGSTVAGTGFSPVLEDATKTNLEQLSKLVN  324
            AAAVVKVLGDRSIRTC++++EC SGG DN  G+T+AGTGF+P+LED+TK NLEQL KLVN
Sbjct  269  AAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVN  328

Query  325  GQLQPTADNLAALKTGSLVVTRSVIQALRDDPDRAALVQRLAGELAMADTVEAALTMRRM  384
            G   PT  NL  +K+GSL VTR+VI+AL+ DPD +ALVQRLAGELAM+DT+E++L+MRRM
Sbjct  329  GTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRM  388

Query  385  LTTGESEPNAAEQPEAIAEGDRRIDALDRELNALRNEMELRKSISSNSLLTTLERQGERN  444
            LTTG+SEPNAA+QP+A+AE+DRRI+ALDRELN+L+ EMELR+ ++ N+ L  + R+ +R+
Sbjct  389  LTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRS  448

Query  445  QDNQLQQKAGNQDQGFSQMNQPQPG  469
              N  ++   N D  +S+++  +PG
Sbjct  449  VTNPQKESQTNADTRLSELETRKPG  473

10) ECL_00450 in NC_014121


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  473 bits (1781),  Expect = 2e-134, Method: Compositional matrix adjust.
 Identities = 286/449 (64%), Positives = 379/449 (85%), Gaps = 4/449 (0%)

Query  30   NTSLSSDG--ASVSGAINDGLFYSIGGGSVISPPPSRSNMSRLGLNDGWSSDLMCGNFDL  87
              +LS+DG   SV+GA++D LFYSIGGGSVIS P +   M R+GL+ G SSDLMCGNFD+
Sbjct  28   APTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDI  87

Query  88   KTTVGNQLNGITSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLSY  147
            KTTVGNQLNG+T+GFKDLMG+VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAGL++
Sbjct  88   KTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAF  147

Query  148  DKALLNCQNMSKKLADYTVGSK--WQQAAVSEEYKDIVASSGGDAVSSDQQLQKATGEEG  205
            DK+ LNC++M++KLADYT+G K  W ++AV EEYK+ V++SGGDA+ +++   KA+G EG
Sbjct  148  DKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEG  207

Query  206  VTWVggqkrggkgqqAIQPTRDLAKAGYNMMNSLPVTSNSSVGSASCNGTACQRWPssdd  265
             TWVGG+K GGKGQ AIQPTRDLAKAGYNMMN+L+VTSNS+V+++SC+G+ACQ+  +S++
Sbjct  208  ATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEE  267

Query  266  aaaavvKVLGDRSIRTCRETSECTSGGTDNQPGSTVAGTGFSPVLEDATKTNLEQLDKLV  325
            AAAAVVKVLGDRSIRTC++++EC SGG DN  G+T+AGTGF+P+LED+TK NLEQL KLV
Sbjct  268  AAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLV  327

Query  326  GGQIQPTAENLGALKTGSLVVTRGVIQSLRDDPDKAALVQRLAGELAMADTVETALTMRR  385
             G   PT  NL+ +K+GSL VTRGVI++L+ DPD +ALVQRLAGELAM+DT+ET+L+MRR
Sbjct  328  NGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRR  387

Query  386  MLTTGESEPNAAEQPEAIAEGDRRIDALDRELNALRNEMELRKAISNNSLLTTLERQGAR  445
            MLTTG+SEPNAA+QP+A+AE+DRRI+ALDRELN+L+ EMELR+ +++N+ L  + R+  R
Sbjct  388  MLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENR  447

Query  446  NQDNQLQQKAGNQDQGFSQMNQTQSSGAK  474
            +  N  ++   N D  +S+++  ++++++
Sbjct  448  SVTNPQKESQTNADTRLSELETRKPGDSQ  476

11) CFSAN002050_22245 in NC_021818


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  471 bits (1775),  Expect = 5e-134, Method: Compositional matrix adjust.
 Identities = 276/440 (63%), Positives = 375/440 (86%), Gaps = 2/440 (0%)

Query  54   GYGKSVDGAVSDKLFYTLGGGSVISQPATRGNMQKLGLNTGWSSDLMCGNFDLKTTVGNQ  113
            GYGKSV+GAVSDKLFY++GGGSVIS P+T   M+++GL++G SSDLMCGNFD+KTTVGNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  114  LNGVTSGFKNLMGDVIQGATGAVASLPAMVIQRANPGLYDMLTNGVLQANVSFDKAQLNC  173
            LNGVT+GFK+LMGDVI GATGAV+S+PAM++QRANPGLY+M+TNGVLQA ++FDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  174  QNMAKKMMDFS--DSSNWTQQAMMDEYKSIVNSgdadavrvddagrkaSGASGSNWVGGQ  231
            ++MA+K+ D++  D S+WT+ A+ +EYK  V+++++DA+R ++A  KASG  G+ WVGG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  232  KRGGAGQPAIRVTHDLVAAGYNMMNGLPVTSDSTVGESSCNGGACSKFGSAEEAAAMTVK  291
            K GG GQPAI+ T+DL  AGYNMMN L+VTS+STV+ +SC+G+AC KF ++EEAAA  VK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  292  VLGDRSMRTCANASECTSGDADDQPGTTVAGTGFAPLLEEATKANAEQLVRLVNGTEKPT  351
            VLGDRS+RTC +A+EC SG+ D+  GTT+AGTGFAP+LE++TK N EQLV+LVNGTE PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  352  AANLAKLKTGGLPVTAGVIKALQRDPDNAALTARLAGELAMSDTVETALLMRRMMVTGMS  411
             ANL K+K+G+L VT GVI AL+RDPD +AL  RLAGELAMSDT+ET+L MRRM+ TG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  412  EPNAAAQPKAIDTAGQRIEALDREIAALKNEMEMKRELSRNSVLTIIDRENQRVETNPQT  471
            EPNAA QP+A+  A++RIEALDRE+ +LK EME++RE+++N+ L ++ RE++R  TNPQ 
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  472  QSDDNTDSRFNQMAAPQSAE  491
            +S+ N+D+R++++ + ++++
Sbjct  455  ESQTNADTRLSELETRKPGD  474

12) YE3466 in NC_008800


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  463 bits (1746),  Expect = 9e-132, Method: Compositional matrix adjust.
 Identities = 270/405 (67%), Positives = 359/405 (89%), Gaps = 2/405 (0%)

Query  40   ISDGLFYSIGGGTVISPSSSRNNMTRLGMTGSWNSDLMCGNFDLKTTVGNQLNGVTSGFK  99
            +SD LFYSIGGG+VIS +++   M R+G+ ++ +SDLMCGNFD+KTTVGNQLNGVT+GFK
Sbjct  44   VSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFK  103

Query  100  DLMSDVIQGATGAVASMPAMVIQRANPGLYEMLTNGMLQAGLSFDKSKLNCQNLAKKMAD  159
            DLM+DVI GATGAV+SMPAM++QRANPGLYEM+TNG+LQAGL+FDKSKLNC+++A+K+AD
Sbjct  104  DLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLAD  163

Query  160  YTLGNK--WTQAAVTEEYKsivassdgdavssdHQLHKATGEEGTTWIGGRKRGGKGQPA  217
            YTLG+K  WT++AV EEYK  V++S+GDA+ +++   KA+G EG+TW+GG+K GGKGQPA
Sbjct  164  YTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPA  223

Query  218  IKPTHDLAKAGYNMMNNLPVTSNHLIGSANCNGAACLRYKNSEEAATAVVKVLGDRSIRT  277
            I+PT+DLAKAGYNMMNNL+VTSN  +++++C+G+AC ++KNSEEAA+AVVKVLGDRSIRT
Sbjct  224  IQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRT  283

Query  278  CREASACSSGGGENRSGSTVAGSGFSPMIEETTKENLEQLIKLVGGREKPTTESLAKLKT  337
            C++A+ C+SGG +N  G+T+AG+GF+PM+E+TTKENLEQL+KLV G E PT  +L K+K+
Sbjct  284  CKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKS  343

Query  338  GGLVVTRGVIQSLKDDPDNSALIQRLAGELAMADTVENALTMRRMLTTGQAEPNAADQPE  397
            G+L VTRGVI++LK DPD +AL+QRLAGELAM+DT+E +L+MRRMLTTGQ+EPNAADQP+
Sbjct  344  GSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQ  403

Query  398  ALAEGDRRIEALDRELAALRNEMELRKAISNNSLLTTLERQGRRN  442
            A+AE+DRRIEALDREL +L+ EMELR+ +++N+ L  + R+  R+
Sbjct  404  AMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRS  448

13) plu1088 in NC_005126


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  460 bits (1733),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 287/468 (62%), Positives = 384/468 (83%), Gaps = 4/468 (0%)

Query  1    MRQRLFLPVLIALAFMTVPVVRAAGFAIAD-SPIGYGKSLNGAVSDKLFYNIGGGSVISQ  59
            MR + +L+V + L++++   + AA +  +  S  GYGKS+NGAVSDKLFY+IGGGSVIS 
Sbjct  1    MRSQSILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVIST  60

Query  60   PATRSHLQHLGGLNLGWSSDLMCGNFDLKTTVGNQLNGLTSGFKNLMGEVIQGATGAVAS  119
            P+T   ++++G L+ G SSDLMCGNFD+KTTVGNQLNG+T+GFK+LMG+VI GATGAV+S
Sbjct  61   PGTMYGMKRIG-LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSS  119

Query  120  LPAMVIQRANPGLYEMLTNGVLQAGIAFDKSQLSCQNMSQRMMDFS--DSSKWTKAALME  177
            +PAM++QRANPGLYEM+TNGVLQAG+AFDKS+L+C++M++++ D++  D S WT +A+ E
Sbjct  120  MPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVRE  179

Query  178  EYKTLVNTGNGDAVGTTQKMEVADGTQGSNWIGGEKRGGKGQKAIQPIRDLAKAGFNMMN  237
            EYK  V+++ GDA+ + +    A G +G+ W+GG K GGKGQ AIQP RDLAKAG+NMMN
Sbjct  180  EYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMN  239

Query  238  NLPANSHANVNRTQCNGAACQKFKNSEEAADAVVKVLGDRSVRTCTDSRQCTSGDTKDQP  297
            NL+  S++ V+   C+G+ACQKFKNSEEAA AVVKVLGDRS+RTC D+ +C SG+  +  
Sbjct  240  NLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQ  299

Query  298  GASVAGTGFAPMLEEATRTNIEQLMKLVSGENAPTIVNLAKLKTGSLMVTRGVIQALKRD  357
            G+++AGTGFAPMLE++T+ N+EQL+KLV+G +APT  NL K+K+GSL VTRGVI+ALKRD
Sbjct  300  GTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRD  359

Query  358  PDSGALVSRLASELAMADTVETALTMRRMLMTGqaepnaaaqaqamaESDRRIATLDREI  417
            PD+GALV RLA+ELAM+DT+ET+L+MRRML TGQ+EPNAA Q+QAMAE+DRRI +LDRE+
Sbjct  360  PDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDREL  419

Query  418  TALKNEMELRRAIAQNTALTTLEREQNRVEMNLQRQSTDNTDSRIHTL  465
             +LK EMELRR +A+NTAL  + RE+NR   N Q++S  N+D+R+  L
Sbjct  420  NSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSEL  467

14) YpsIP31758_3700 in NC_009708


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  459 bits (1731),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 270/405 (67%), Positives = 356/405 (88%), Gaps = 2/405 (0%)

Query  40   ISDGLFYSIGGGTVISPSSSRNNMTRLGMTGSWNSDLMCGNFDLKTTVGNQLNGVTSGFK  99
            +SD LFYSIGGG+VIS +++   M R+G+ ++ +SDLMCGNFD+KTTVGNQLNGVT+GFK
Sbjct  44   VSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFK  103

Query  100  DLMSDVIQGATGAVASMPAMVIQRANPGLYEMLTNGMLQAGLSFDKSKLNCQNLAKKMAD  159
            DLM+DVI GATGAV+SMPAM++QRANPGLYEM+TNG+LQAGL+FDKSKLNC+++A+K+AD
Sbjct  104  DLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLAD  163

Query  160  YTLGNK--WTQAAVAEEYKsivassdgdavssdHQLHKATGEEGTTWIGGRKRGGKGQPA  217
            YTLG+K  WT++AV EEYK  V++S+GDA+ +++   KA+G EG+TW+GG+K GGKGQPA
Sbjct  164  YTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPA  223

Query  218  IKPTYDLAKAGYNMMNNLPVTSNHSIVAVNCNGAVCLRYKNSEEAATAVVKVLGDRSIRT  277
            I+PT DLAKAGYNMMNNL+VTSN ++ A +C+G+ C ++KNSEEAA+AVVKVLGDRSIRT
Sbjct  224  IQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRT  283

Query  278  CREASACSSGGGENRSGSTVAGSGFSPMIEETTKENLEQLIKLVGGREKPTTESLAKLKT  337
            C++A+ C+SGG +N  G+T+AG+GF+PM+E+TTKENLEQL+KLV G E PT  +L K+K+
Sbjct  284  CKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKS  343

Query  338  GGLVVTRGVIQSLKDDPDNSALIQRLAGELAMADTVENALTMRRMLTTGQAEPNAADQPE  397
            G+L VTRGVI++LK DPD +AL+QRLAGELAM+DT+E +L+MRRMLTTGQ+EPNAADQP+
Sbjct  344  GSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQ  403

Query  398  ALAEGDRRIEALDRELAALRNEMELRKAISNNSLLTTLERQGRRN  442
            A+AE+DRRIEALDREL +L+ EMELR+ +++N+ L  + R+  R+
Sbjct  404  AMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRS  448

15) W5S_3485 in NC_017845


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  458 bits (1727),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 291/467 (63%), Positives = 396/467 (85%), Gaps = 2/467 (0%)

Query  11   SVSILSGILAITILGTAPHAEAEVNTSPsgasvsgavsDGLFYSIGGGTVISPPSSRNSM  70
            SV ++ GI++   L++A    + ++    G SV+GAVSD LFYSIGGG+VIS P++  +M
Sbjct  8    SVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGM  67

Query  71   TRLGVTGGWSSDLMCGNFDMKTTVGNQLNGITSGFKDLMGTVIQGATGAVASMPAMVIQR  130
             R+G+ +G SSDLMCGNFD+KTTVGNQLNG+T+GFKDLMG VI GATGAV+SMPAM++QR
Sbjct  68   KRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQR  127

Query  131  ANPALYEMLTNGVLQAGLSFDKAKLSCQSMANKMADYTVGNK--WTQAAVVEEYKDIVAS  188
            ANP+LYEM+TNGVLQAGL+FDK+KL+C+SMANK+ADYT+G+K  WT++AV EEYK+ V++
Sbjct  128  ANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSA  187

Query  189  SNGDAVSSDQKLQKATGEDGATWiggqkrggkgqaaiRPTRDLAKAGFNMMNNLPvtsns  248
            S GDA+ +++   KA+G +GATW+GG+K GGKGQ+AI+PTRDLAKAG+NMMNNL+VTSNS
Sbjct  188  SGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNS  247

Query  249  svsssscngtscQRFPSSEKAAEAVVKVLGDRSIRTCRDASQCSSGGVENEPGSSVAGTG  308
            +VS++SC+G++CQ+F +SE AA AVVKVLGDRSIRTC+DA++C+SGG++N  G+++AGTG
Sbjct  248  TVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTG  307

Query  309  FSPMLEEATKENTEQLVKLVGGAEAPTASNLAKLKTGSMVVTRSVIQSLKDDPDNSALIQ  368
            F+PMLE++TKEN EQLVKLV G+EAPT +NL K+K+GS+ VTR+VI++LK DPD +AL+Q
Sbjct  308  FAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQ  367

Query  369  RLAGELAMSDTVETALTMRRMLTTGQSEPNAADQPEALSEGDRRIDALDRELAALKNEMD  428
            RLAGELAMSDT+ET+L+MRRMLTTGQSEPNAADQP+A++E+DRRI+ALDREL +LK EM+
Sbjct  368  RLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEME  427

Query  429  IRKAISNNSLLTTLERQGVRNQGNRFQQKSGSQDQGFNGLSQNQGGQ  475
            +R+ +++N+ L  + R+  R+  N  ++   + D  ++ L   + G+
Sbjct  428  LRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGD  474

16) Pecwa_0680 in NC_013421


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  458 bits (1726),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 292/467 (63%), Positives = 397/467 (86%), Gaps = 2/467 (0%)

Query  11   SVSILSGILAITILGTATHVGAEINTSPsgasvsgavsDGLFYSIGGGTVISPPSSRNSM  70
            SV ++ GI++   L++A   ++ ++    G SV+GAVSD LFYSIGGG+VIS P++  +M
Sbjct  8    SVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGM  67

Query  71   TRLGVTGGWSSDLMCGNFDMKTTVGNQLNGITSGFKDLMGTVIQGATGAVASMPAMVIQR  130
             R+G+ +G SSDLMCGNFD+KTTVGNQLNG+T+GFKDLMG VI GATGAV+SMPAM++QR
Sbjct  68   KRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQR  127

Query  131  ANPALYEMLTNGVLQAGLSFDKAKLSCQSMANKMADYTVGNK--WTQAAVVEEYKDIVAS  188
            ANP+LYEM+TNGVLQAGL+FDK+KL+C+SMANK+ADYT+G+K  WT++AV EEYK+ V++
Sbjct  128  ANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSA  187

Query  189  SNGDAVSSDQKLQKATGEEGATWiggqkrggkgqaaiRPTRDLAKAGFNMMNNLPvtsns  248
            S GDA+ +++   KA+G EGATW+GG+K GGKGQ+AI+PTRDLAKAG+NMMNNL+VTSNS
Sbjct  188  SGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNS  247

Query  249  svsssscngtscQRFPSSEKAAEAVVKVLGDRSIRTCRDASQCSSGGVENEPGSSVAGTG  308
            +VS++SC+G++CQ+F +SE AA AVVKVLGDRSIRTC+DA++C+SGG++N  G+++AGTG
Sbjct  248  TVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTG  307

Query  309  FSPMLEEATKENTEQLVKLVGGAEAPTASNLAKLKTGSMVVTRSVIQSLKDDPDNSALIQ  368
            F+PMLE++TKEN EQLVKLV G+EAPT +NL K+K+GS+ VTR+VI++LK DPD +AL+Q
Sbjct  308  FAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQ  367

Query  369  RLAGELAMSDTVETALTMRRMLTTGQSEPNAADQPEALSEGDRRIDALDRELAALKNEMD  428
            RLAGELAMSDT+ET+L+MRRMLTTGQSEPNAADQP+A++E+DRRI+ALDREL +LK EM+
Sbjct  368  RLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEME  427

Query  429  IRKAISNNSLLTTLERQGVRNQGNRFQQKSGSQDQGFNGLSQNQGGQ  475
            +R+ +++N+ L  + R+  R+  N  ++   + D  ++ L   + G+
Sbjct  428  LRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGD  474

17) EPYR_03261 in NC_017390


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  452 bits (1702),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 275/428 (65%), Positives = 360/428 (85%), Gaps = 2/428 (0%)

Query  42   FYSIGGGSVTSPPPSRSNMSRLGLNGGWSSDLMCGNFDLKTTVGNQLNGITSGFKDLMGN  101
            FYSIGGGSV S P +   M R+GL++G SSDLMCGNFD+KTTVGNQLNG+T+GFKDLMG+
Sbjct  49   FYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGD  108

Query  102  VIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGINFDKGQLNCQNMSKKLADYTMGS  161
            VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAG+ FDK++LNC++M++KLADYT+G 
Sbjct  109  VITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGD  168

Query  162  K--WQQAAVSEEYKDIVAGSGGDAVSSDQKLQKAtgeegvtwvggeKRGGKGQRAIQPTR  219
            K  W ++AV EEYK+ V++SGGDA+ +++   KA+G EG TWVGG K GGKGQ AIQPTR
Sbjct  169  KSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTR  228

Query  220  DLAKAGYNMMNGLPVTSNNSVAAASCNGSACQRYKTSDEASAAVVKVLGDRSIRTCRETS  279
            DLAKAGYNMMN L+VTSN++V+A+SC+GSACQ++K S+EA+AAVVKVLGDRSIRTC++++
Sbjct  229  DLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDAT  288

Query  280  ECASGGSENQPGSTIAGSGFSPLLEDATKENLEQLGKLVNGQLPPTADNLAGIRTGSLVV  339
            EC+SGG +N  G+TIAG+GF+P+LED+TKENLEQL KLVNG  +PT  NL  I++GSL V
Sbjct  289  ECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKV  348

Query  340  TRGVIQALRDDQDKAALVQRLAGELAMADTVETALTMRRMLTTGQSEPNAAGQTEAIAEG  399
            TRGVI+AL+ D D +ALVQRLAGELAM+DT+ET+L+MRRMLTTGQSEPNAA+Q +A+AE+
Sbjct  349  TRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEA  408

Query  400  DRRIDALDREIAALRNEMELRKSISSNSLLTTLERQGARNQDNRLQQTSGSEDQGFGRMG  459
            DRRI+ALDRE+ +L+ EMELR+ ++ N+ L  + R+  R+  N  +++  + D  ++ + 
Sbjct  409  DRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELE  468

Query  460  QTQPTGAN  467
              +P +++
Sbjct  469  TRKPGDSQ  476

18) EpC_30220 in NC_012214


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  452 bits (1702),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 275/428 (65%), Positives = 360/428 (85%), Gaps = 2/428 (0%)

Query  42   FYSIGGGSVTSPPPSRSNMSRLGLNGGWSSDLMCGNFDLKTTVGNQLNGITSGFKDLMGN  101
            FYSIGGGSV S P +   M R+GL++G SSDLMCGNFD+KTTVGNQLNG+T+GFKDLMG+
Sbjct  49   FYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGD  108

Query  102  VIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGINFDKGQLNCQNMSKKLADYTMGS  161
            VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAG+ FDK++LNC++M++KLADYT+G 
Sbjct  109  VITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGD  168

Query  162  K--WQQAAVSEEYKDIVAGSGGDAVSSDQKLQKAtgeegvtwvggeKRGGKGQRAIQPTR  219
            K  W ++AV EEYK+ V++SGGDA+ +++   KA+G EG TWVGG K GGKGQ AIQPTR
Sbjct  169  KSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTR  228

Query  220  DLAKAGYNMMNGLPVTSNNSVAAASCNGSACQRYKTSDEASAAVVKVLGDRSIRTCRETS  279
            DLAKAGYNMMN L+VTSN++V+A+SC+GSACQ++K S+EA+AAVVKVLGDRSIRTC++++
Sbjct  229  DLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDAT  288

Query  280  ECASGGSENQPGSTIAGSGFSPLLEDATKENLEQLGKLVNGQLPPTADNLAGIRTGSLVV  339
            EC+SGG +N  G+TIAG+GF+P+LED+TKENLEQL KLVNG  +PT  NL  I++GSL V
Sbjct  289  ECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKV  348

Query  340  TRGVIQALRDDQDKAALVQRLAGELAMADTVETALTMRRMLTTGQSEPNAAGQTEAIAEG  399
            TRGVI+AL+ D D +ALVQRLAGELAM+DT+ET+L+MRRMLTTGQSEPNAA+Q +A+AE+
Sbjct  349  TRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEA  408

Query  400  DRRIDALDREIAALRNEMELRKSISSNSLLTTLERQGARNQDNRLQQTSGSEDQGFGRMG  459
            DRRI+ALDRE+ +L+ EMELR+ ++ N+ L  + R+  R+  N  +++  + D  ++ + 
Sbjct  409  DRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELE  468

Query  460  QTQPTGAN  467
              +P +++
Sbjct  469  TRKPGDSQ  476

19) SPAB_05392 in NC_010102


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  450 bits (1695),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 287/416 (69%), Positives = 360/416 (87%), Gaps = 2/416 (0%)

Query  36   DGLFYSIGGGSVISPPPSRNNMSRIGINGGLSSDLMCGNFDIKTTVGNQLNGITSGFKDL  95
            D LFYSIGGGSVIS P +   M RIG+++GLSSDLMCGNFDIKTTVGNQLNG+T+GFKDL
Sbjct  46   DKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDL  105

Query  96   MGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLSFDKAMLNCQSMSKKLADYT  155
            MG+VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAGL+FDK+ LNC+SM++KLADYT
Sbjct  106  MGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYT  165

Query  156  IGNK--WQQVAVSEEYKDIVATSGGDAVSSDQKLQKATGEEGVTWVGGQKRGGKGQPAIQ  213
            +G+K  W + AV EEYK+ V++SGGDA+ +++   KA+G EG TWVGG+K GGKGQPAIQ
Sbjct  166  LGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQ  225

Query  214  PTRDLAKAGYNMMNNLPvtsnssvgssscngtACQRYksseeaaaavvkvLGDRSIRTCR  273
            PTRDLAKAGYNMMNNL+VTSNS+V+++SC+G+ACQ++K+SEEAAAAVVKVLGDRSIRTC+
Sbjct  226  PTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCK  285

Query  274  ETSECTSGGTDNQPGSAVAGTGFSPILEDATKENLEQLSKLVSGELQPTTDNLSALKTGS  333
            +++EC SGG DN  G+++AGTGF+P+LED+TKENLEQL KLV+G   PT  NL  +K+GS
Sbjct  286  DATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGS  345

Query  334  LVVTRGVIQALRDDPDKAALVQRLAGELAMSDTVETALTMRRMLTTGESEPNAAEQPEAI  393
            L VTRGVI+AL+ DPD +ALVQRLAGELAMSDT+ET+L+MRRMLTTG+SEPNAA+QP+A+
Sbjct  346  LKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAM  405

Query  394  AEGDRRIDALDRELTALRNEMELRKSISNNSLLTALERQGTRNQDNRLQQKAGNED  449
            AE+DRRI+ALDREL +L+ EMELR+ +++N+ L  + R+  R+  N  ++   N D
Sbjct  406  AEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNAD  461

20) EAM_2854 in NC_013971


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  450 bits (1697),  Expect = 6e-128, Method: Compositional matrix adjust.
 Identities = 275/428 (65%), Positives = 358/428 (84%), Gaps = 2/428 (0%)

Query  42   FYSIGGGSVTSPPPGRSNMSRLGLNGGWSSDLMCGNFDLKTTVGNQLNGITSGFKDLMGN  101
            FYSIGGGSV S P     M R+GL++G SSDLMCGNFD+KTTVGNQLNG+T+GFKDLMG+
Sbjct  49   FYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGD  108

Query  102  VIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLNFDKGQLNCQNMSKKLADYTMGS  161
            VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAGL FDK++LNC++M++KLADYT+G 
Sbjct  109  VITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGD  168

Query  162  K--WQQAAVSEEYKDIVAGSGGDVVSSDQKLQKAtgeegvtwvggeKRGGKGQRAIQPTR  219
            K  W ++AV EEYK+ V++SGGD + +++   KA+G EG TWVGG K GGKGQ AIQPTR
Sbjct  169  KSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTR  228

Query  220  DLAKAGYNMMNGLPVTSNNSVAAASCNGSACQRYKTSDEASAAVVKVLGDRSIRTCRETS  279
            DLAKAGYNMMN L+VTSN++V+A+SC+GSACQ++K S+EA+AAVVKVLGDRSIRTC++++
Sbjct  229  DLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDAT  288

Query  280  ECASGGSENQPGSTIAGSGFSPLLEDATKENLEQLGKLVNGQLPPTADNLAGIRTGSLVV  339
            EC+SGG +N  G+TIAG+GF+P+LED+TKENLEQL KLVNG  +PT  NL  I++GSL V
Sbjct  289  ECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKV  348

Query  340  TRGVIQALRDDRDKAALVQRLAGELAMADTVETALTMRRMLTTGQSEPNAAGQTEAIAEG  399
            TRGVI+AL+ D D +ALVQRLAGELAM+DT+ET+L+MRRMLTTGQSEPNAA+Q +A+AE+
Sbjct  349  TRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEA  408

Query  400  DRRIDALDREIAALRNEMELRKSISSNSLLTTLERQGARNQDNRLQQTSGSEDQGFGRMG  459
            DRRI+ALDRE+ +L+ EMELR+ ++ N+ L  + R+  R+  N  +++  + D  ++ + 
Sbjct  409  DRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELE  468

Query  460  QTQPTGAN  467
              +P +++
Sbjct  469  TRKPGDSQ  476

21) EAMY_0572 in NC_013961


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  450 bits (1697),  Expect = 6e-128, Method: Compositional matrix adjust.
 Identities = 275/428 (65%), Positives = 358/428 (84%), Gaps = 2/428 (0%)

Query  42   FYSIGGGSVTSPPPGRSNMSRLGLNGGWSSDLMCGNFDLKTTVGNQLNGITSGFKDLMGN  101
            FYSIGGGSV S P     M R+GL++G SSDLMCGNFD+KTTVGNQLNG+T+GFKDLMG+
Sbjct  49   FYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGD  108

Query  102  VIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLNFDKGQLNCQNMSKKLADYTMGS  161
            VI GATGAV SMPAM +QRANPGLYEM+TNGVLQAGL FDK++LNC++M++KLADYT+G 
Sbjct  109  VITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGD  168

Query  162  K--WQQAAVSEEYKDIVAGSGGDVVSSDQKLQKAtgeegvtwvggeKRGGKGQRAIQPTR  219
            K  W ++AV EEYK+ V++SGGD + +++   KA+G EG TWVGG K GGKGQ AIQPTR
Sbjct  169  KSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTR  228

Query  220  DLAKAGYNMMNGLPVTSNNSVAAASCNGSACQRYKTSDEASAAVVKVLGDRSIRTCRETS  279
            DLAKAGYNMMN L+VTSN++V+A+SC+GSACQ++K S+EA+AAVVKVLGDRSIRTC++++
Sbjct  229  DLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDAT  288

Query  280  ECASGGSENQPGSTIAGSGFSPLLEDATKENLEQLGKLVNGQLPPTADNLAGIRTGSLVV  339
            EC+SGG +N  G+TIAG+GF+P+LED+TKENLEQL KLVNG  +PT  NL  I++GSL V
Sbjct  289  ECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKV  348

Query  340  TRGVIQALRDDRDKAALVQRLAGELAMADTVETALTMRRMLTTGQSEPNAAGQTEAIAEG  399
            TRGVI+AL+ D D +ALVQRLAGELAM+DT+ET+L+MRRMLTTGQSEPNAA+Q +A+AE+
Sbjct  349  TRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEA  408

Query  400  DRRIDALDREIAALRNEMELRKSISSNSLLTTLERQGARNQDNRLQQTSGSEDQGFGRMG  459
            DRRI+ALDRE+ +L+ EMELR+ ++ N+ L  + R+  R+  N  +++  + D  ++ + 
Sbjct  409  DRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELE  468

Query  460  QTQPTGAN  467
              +P +++
Sbjct  469  TRKPGDSQ  476

22) ECA0578 in NC_004547


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  449 bits (1690),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 270/439 (62%), Positives = 366/439 (84%), Gaps = 2/439 (0%)

Query  37   GYGADVSGAVSDKLFYTLGGGSVISQPATRISMQKLGVDLGWSSDLQCGNFDLKTTVGNQ  96
            GYG  V+GAVSDKLFY++GGGSVIS P+T  +M+++G+D G SSDL CGNFD+KTTVGNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  97   LNGVTSGYKNLMGEVIQGATGAVSSLPGAIIQRASPGLYDMLTNGVLQANVAFDKAMFNC  156
            LNGVT+G+K+LMG+VI GATGAVSS+P+ I+QRA+PGLY+M+TNGVLQA +AFDK+ +NC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  157  QNMTKRMMDFS--DSSKWTQSAQADEYKQLVNSGKADAIQTDNDSQKLTGNNGQNWIGGQ  214
            ++M++++ D++  D S WT+SA  +EYK+ V+++ +DA+++++   K +G++G  W+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  215  RRGGKGQPAIRPTHDLAAAGYNMMNSQPALSTSSVSTSNCTGSVCQKFPNSEEAAKAVVQ  274
            + GGKGQPAI+PT+DLA AGYNMMN+ +  S S+VS+++C GS CQKF NSEEAA AVV+
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  275  VLGDRSMRTCKVATDCTSGDEgqqpgttqagtgFAPMLEEATKANLEQLVKMVNGAEKPT  334
            VLGDRS+RTCK AT+C SG+ ++  GTT AGTGFAPMLE++TK NLEQLVK+VNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  335  AANLGKLKAGSLTITSGVIRALQRDPDNAALTGRLASELAMADTVETALLMRRMLMTGMS  394
             ANL+K+K+GSL +T GVI AL+RDPD +AL  RLA+ELAM+DT+ET+L MRRML TG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  395  EPNAAAQEAAVDEGTRRIESLDREINALKNEMELKRELARNSVLTIIERENSRVETNPQK  454
            EPNAA Q  A+ E+ RRIE+LDRE+N+LK EMEL+RE+A+N+ L ++ RE++R  TNPQK
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  455  QIQDNTDMRVNQMTTPVQG  473
            + Q N+D R++++ T   G
Sbjct  455  ESQTNADTRLSELETRKPG  473

23) XBJ1_1496 in NC_013892


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  448 bits (1687),  Expect = 4e-127, Method: Compositional matrix adjust.
 Identities = 274/473 (58%), Positives = 382/473 (81%), Gaps = 6/473 (1%)

Query  1    MRRKSVLLIAGGLVVASVQGQTSGLSVALPAVSHSALGYGAQSSGAVSDTLFYTLGGGSV  60
            MR +S+L +   L + S    +++L   L A + S+ GYG   +GAVSD LFY++GGGSV
Sbjct  1    MRSQSILSVCLMLGIVSSGPLSAAL---LDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSV  57

Query  61   ISEPASRAGSTRLAGLELGWSSDLMCGNFDLKTTVSNQLNGITAGMKNLMSEVIQGATGA  120
            IS P++  G  R+ GL+ G SSDLMCGNFD+KTTV+NQLNG+T G K+LM++VI GATGA
Sbjct  58   ISTPGTMYGMKRI-GLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGA  116

Query  121  VASLPAMIIQRANPGLYDMLTNGVLQANVAFDKAQFNCQNMAKRMMDFAQNNK--WSQSA  178
            V+S+PAMI+QRANPGLY+M+TNGVLQA +AFDK+++NC++MA+++ D++  +K  W++SA
Sbjct  117  VSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESA  176

Query  179  ALQEYKNQVNGGDGDAVRVNNagtkatgaggHSWIGGQRQGGKGQNAIRPTRDLASAGFN  238
              +EYK+ V++++GDA+R ++A TKA+G  G +W+GG++ GGKGQ AI+PTRDLA AG+N
Sbjct  177  VREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYN  236

Query  239  MMNQLPVLSQSSVSTFNCEGSACRKFSTAREAAEAVVSVLGDRAIRTCAHAAECSSGGEQ  298
            MMN+L+V S+S+VS+ +C GSAC+KF  + EAA AVV VLGDR+IRTC +A+EC+SGG +
Sbjct  237  MMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGID  296

Query  299  HQPGTTVAGTGFAPMLEAHTKTNAEHLVKLISGTEKPTRVNLTKLKTGSLAVTQGVIQAL  358
            +  GTT+AGTGFAPMLE  TK N E+LVKL++GTE PT+ NL K+K+GSL VT+GVI+AL
Sbjct  297  NAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDAL  356

Query  359  QRDPDKAALTARLAGELAMSETIETALLMRRMLITGMSEPNAAAQSEALAEGDRRIAALD  418
            +RDPD +AL  RLAGELAMS+TIET+L MRRML TG SEPNAA Q++A+AE+DRRI ALD
Sbjct  357  KRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALD  416

Query  419  REINALKNEMELKQALSRNSILTIIERDTQRIHAHPQKQVADSQDARFYQLEA  471
            RE+N+LK EMEL++ +++N+ L ++ R+ +R  ++PQK+   + D+R+ +LE+
Sbjct  417  RELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELET  469

24) EbC_pEb10200450 in NC_014304


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  445 bits (1678),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 257/441 (59%), Positives = 362/441 (83%), Gaps = 2/441 (0%)

Query  46   GYGKDVSGAVSDKLYYTLGGGSVISQPATRSNMRKVGMSAGWSSDLMCGNFDLKTTVGNQ  105
            GYGK V+GAVSDKL+Y++GGGSVIS P+T   M+++G+ AG SSDLMCGNFD+KTTVGNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  106  LNGVTNGFKNLMGDVVQNATGAVASLPAMIIQRANPGLYDMLTNGVLQANVSFDKAQLNC  165
            LNGVTNGFK+LMGDV+  ATGAV+S+PAMI+QRANPGLY+M+TNGVLQA ++FDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  166  QNMSKRMMDFAGNNK--WTQGAVMDEYRSLVNSGDADAVRVNNSADKLQGNSGQNWIggq  223
            ++M++++ D++  +K  WT++AV +EY+  V+++++DA+R +++  K  G+ G  W+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  224  krggqgqqAIRPTHDLTAAGFNMMNSLPVLSADTVSSNSCNGGACGKYasaeeaakavvq  283
            K GG+GQ AI+PT+DL+ AG+NMMN+L+V S  TVS+ SC+G+AC K+ ++EEAA AVV+
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  284  vvGDSSLRTCTDASQCTSGDDEQQPGATQAGTGFAPILEETTKENTEQLVKLVNGTEQPN  343
            V+GD S+RTC DA++C SG+ ++  G+T AGTGFAP+LE+TTKEN EQLVKLVNGTE P 
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  344  AANLAKLKTGSLPITAGVIRALQRDPDNAALTARLAGELSMADTVETALIMRRMIVTGMS  403
             ANL K+K+GSL +T GVI AL+RDPD +AL  RLAGEL+M+DT+ET+L MRRM+ TG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  404  EPNAAAQNAAIEEGDRRVAAIDREITALRNEMELKRELSRNSVLTIIERENGRVNSNPQT  463
            EPNAA Q  A+ E+DRR+ A+DRE+ +L+ EMEL+RE+++N+ L ++ RE+ R  +NPQ 
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  464  QSDDSTDSRVNRLAVPETENN  484
            +S+ ++D+R++ L      ++
Sbjct  455  ESQTNADTRLSELETRKPGDS  475

25) XNC1_3472 in NC_014228


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  444 bits (1674),  Expect = 4e-126, Method: Compositional matrix adjust.
 Identities = 261/436 (60%), Positives = 354/436 (82%), Gaps = 3/436 (0%)

Query  38   GYGAQSSGAVSDTLFYTLGGGSVISEPASRGGSTRLAGLELGWSSDLMCGNFDLKTTVSN  97
            GYG   +GAVSD LFY++GGGSVIS P++  G  R+ GL+ G SSDLMCGNFD+KTTV+N
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRI-GLDAGLSSDLMCGNFDIKTTVGN  93

Query  98   QLNGITAGMKNLMSEVIQGATGAVASLPAMIIQRANPGLYDMLTNGVLQANVAFDKAQFN  157
            QLNG+T G K+LM++VI GATGAV+S+PAMI+QRANPGLY+M+TNGVLQA +AFDK+++N
Sbjct  94   QLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLN  153

Query  158  CQNMARRMVDFAQNNK--WTQSAAMQEYKTQVNSGDADAVRVNNagtratgtggHPWIGG  215
            C++MA ++ D++  +K  WT+SA  +EYK  V+++++DA+R ++A T+A+G  G  W+GG
Sbjct  154  CESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGG  213

Query  216  RKQGGKGQSAIRPTRDLASAGFNMMNHQPVLSTAAIRHQDCSGSSCTKFSSAREAAEAVV  275
            +K GGKGQ+AI+PTRDLA AG+NMMN+ +V S +++    C GS+C KF ++ EAA AVV
Sbjct  214  KKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVV  273

Query  276  NVLGDRAIRTCANAAECISGGEAHQPGTTVAGTGFAPMLEAQTQANMEQLVKLVNGTEKP  335
            +VLGDR+IRTC +A+EC SGG  +  GTT+AGTGFAPMLE  T+ N+EQLVKLVNGTE P
Sbjct  274  KVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAP  333

Query  336  TAANLARLKTGSLTVTRGVIQALQRDPDNAALTARLAGELAMAETTETALLMRRMLITGM  395
            T ANL ++K+GSL VTRGVI+AL+RDPD +AL  RLAGELAM++T ET+L MRRML TG 
Sbjct  334  TQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQ  393

Query  396  SEPNAAAQAEALNEGERRIAALDREINALKNEMTLKRELARNAILTIIERENHRIEAHPQ  455
            SEPNAA Q++A+ E++RRI ALDRE+N+LK EM L+RE+A+N+ L ++ RE++R  ++PQ
Sbjct  394  SEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQ  453

Query  456  KHVTESSDKRFYQLEN  471
            K+   ++D R+ +LE 
Sbjct  454  KESQTNADTRLSELET  469

26) Spro_4163 in NC_009832


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  443 bits (1670),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 273/440 (63%), Positives = 369/440 (84%), Gaps = 2/440 (0%)

Query  57   GYGKNASGAVSDKLFYSLGGGSVISQPATRGNMKRLGMNLGWSSDLMCGNFDLKTTIGNQ  116
            GYGK+ +GAVSDKLFYS+GGGSVIS P+T   MKR+G++ G SSDLMCGNFD+KTT+GNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  117  LNGVTDGFKNLMGSVIQGATGAVASLPAMAIQRANPGLYEMLTNGVLQGGVAFDKAQLNC  176
            LNGVT+GFK+LMG VI GATGAV+S+PAM +QRANPGLYEM+TNGVLQ+G+AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  177  QNLSKRMMD--MADTGGWSQAAAMEEAKSLVNNGDADAVRSMNATEKVTGQSGQTWIGGQ  234
            +++++++ D  ++D ++W+++A  EE K  V+ +++DA+R+ +A  K +G+ G TW+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  235  KRGGSGQPAIKPTHDLTAAGYNMMNALPVTSTSNVSGSSCTGGacakyasseeaaaavvk  294
            K GG GQPAI+PT+DL+ AGYNMMN L+VTS S VS++SC G+AC K+ +SEEAAAAVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  295  VLGDTSLRTCKDASQCTSGEGSEQPGSTVAGTGFAPMLEEATKANNEQLAKLVNGAEKPT  354
            VLGD S+RTCKDA++C SG   +  G+T+AGTGFAPMLE++TK N EQL KLVNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  355  TANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIETAFIMRRMITTGMS  414
             ANL K+K+GSL VT GVI AL+RDPD +ALV RLA+ELAM+DTIET++ MRRM+TTG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  415  EPNASAQKVAMEEGDRRIEALDREITALKNEMEMKREISRNAVLTIIVRENNRAETNPQR  474
            EPNA+ Q  AM E+DRRIEALDRE+ +LK EME++RE+++N+ L ++ RE+NR+ TNPQ+
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  475  QSVDSPDTKFNQLAVPESDQ  494
            +S  ++DT++++L    +++
Sbjct  455  ESQTNADTRLSELETRKPGD  474

27) Spro_0350 in NC_009832


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  440 bits (1657),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 271/433 (63%), Positives = 366/433 (85%), Gaps = 2/433 (0%)

Query  57   GYGKNASGAVSDKLFYSLGGGSVISQPATRGNMQRLGMNLGWSSDLMCGNFDLKTTIGNQ  116
            GYGK+ +GAVSDKLFYS+GGGSVIS P+T   M+R+G++ G SSDLMCGNFD+KTT+GNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  117  LNGVTDGFKNLMGSVIQGATGAVASLPAMAIQRANPGLYEMLTNGVLQGGVAFDKAQLNC  176
            LNGVT+GFK+LMG VI GATGAV+S+PAM +QRANPGLYEM+TNGVLQ+G+AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  177  QNLSKRMMD--MADTGGWSQAAAMEEAKSLVNNGDADAVRSMNATEKVTGQSGQTWIGGQ  234
            +++++++ D  ++D ++W+++A  EE K  V+ +++DA+R+ +A  K +G+ G TW+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  235  KRGGAGQPAIKPTHDLAAAGYNMMNAMPVTSTSSVSGSNCTGGacakyasseeaaaavvk  294
            K GG GQPAI+PT+DLA AGYNMMN ++VTS S+VS+++C G+AC K+ +SEEAAAAVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  295  VLGDTSLRTCKDASQCTSGEGAEQPGSTVAGTGFAPMLEEATKANNEQLAKLVNGAEKPT  354
            VLGD S+RTCKDA++C SG   +  G+T+AGTGFAPMLE++TK N EQL KLVNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  355  TANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIETAFIMRRMITTGMS  414
             ANL K+K+GSL VT GVI AL+RDPD +ALV RLA+ELAM+DTIET++ MRRM+TTG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  415  EPNASAQKVAMEEGDRRIEALDREITALKNEMEMKREISRNAVLTIIDRENNRAETNPQR  474
            EPNA+ Q  AM E+DRRIEALDRE+ +LK EME++RE+++N+ L ++ RE+NR+ TNPQ+
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  475  QSVDSLDTKFNQL  487
            +S  + DT++++L
Sbjct  455  ESQTNADTRLSEL  467

28) NT01EI_0354 in NC_012779


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  435 bits (1640),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 263/430 (62%), Positives = 351/430 (82%), Gaps = 2/430 (0%)

Query  1    MDGAVSDKLFYTLGGGSVISQPATRSNMKKLGMDIGWSSDLMCGNFDLKTTVGNQLNGVT  60
            ++GAVSDKLFY++GGGSVIS P+T   MK++G+D G SSDLMCGNFD+KTTVGNQLNGVT
Sbjct  40   VNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVT  99

Query  61   DGFKNLMGDVIQGATGAVASLPAMLIQRANPGLYDMLTNGVLQANVSFDKAQLNCQNMAK  120
            +GFK+LMGDVI GATGAV+S+PAM++QRANPGLY+M+TNGVLQA ++FDK++LNC++MA+
Sbjct  100  NGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMAN  159

Query  121  KMMDFS--DTSKWTQAAMAEEYKSLVNNGETDAIRADQKYQDADGTSgkkwiggqirggk  178
            K+ D++  D S WT++A+ EEYK  V+ +  DA+RA++    A G  G  W+GG+  GGK
Sbjct  160  KLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGK  219

Query  179  gqkAIRPTYDLVSAGYNMMNSLNVLSSETVSGASCNGGACSKFSNAEEAAQAVVRVLGDR  238
            GQ AI+PT DL  AGYNMMN+L+V S+ TVS++SC+G+AC KF N+EEAA AVV+VLGDR
Sbjct  220  GQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDR  279

Query  239  SMRTCSNALQCTSGDTDDQPGLSVAGTGFAPMLEEATKNNTEQLVKLVNGTVKPTATELA  298
            S+RTC +A +C SG+ D+  G ++AGTGFAPMLE++TK+N EQLVKLVNGT  PT ++L 
Sbjct  280  SIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLD  339

Query  299  KLKTGGLPVTANVIRALQRDPDNTALTVRLASELAMSDAVETALLMRRMLTTGMSEPNAQ  358
            K+K+G+L VT  VI AL+RDPD  AL  RLA+ELAMSD++ET+L MRRMLTTG SEPNA 
Sbjct  340  KIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAA  399

Query  359  DQPLALEDGVHRIDALDREIMALKNEMDLKRELARNSVLTIIERDNERVGTNPMIQQTDN  418
            DQP A+ ++ +RI+ALDRE+ +LK EM+L+RE+A+N+ L ++ R+++R  TNP  +   N
Sbjct  400  DQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTN  459

Query  419  ADSRFQKLDT  428
            AD+R+  L+T
Sbjct  460  ADTRLSELET  469

29) PAJ_2508 in NC_017531


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  435 bits (1637),  Expect = 4e-123, Method: Compositional matrix adjust.
 Identities = 296/453 (66%), Positives = 383/453 (85%), Gaps = 4/453 (0%)

Query  23   PALAIDTTLSSQGAG--VSGAINDGLFYsigggsvisppsTRSNMSRLGLDGGWSSDLMC  80
            +AL    TLS++G G  V+GA++D LFYSIGGGSVIS P+T   M R+GLD+G SSDLMC
Sbjct  23   AALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMC  82

Query  81   GNFDLKTTVGNQLNGVTSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQ  140
            GNFD+KTTVGNQLNGVT+GFKDLMG+VI GATGAV SMPAM +QRANPGLYEM+TNGVLQ
Sbjct  83   GNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQ  142

Query  141  AGLNFDKAQMNCQNMSKKLADYTLGSK--WQQAAVSEEYKDIvsssggdavssdQKLQKA  198
            AGL FDK+++NC++M++KLADYTLG K  W ++AV EEYK+ VS+SGGDA+ +++   KA
Sbjct  143  AGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKA  202

Query  199  TGEEGVTWVggqkrggkgqqAIQPTRDLAKAGYNMMNSLPvtsnssvgssgcngtvcQRY  258
            +G EG TWVGG+K GGKGQ AIQPTRDLAKAGYNMMN+L+VTSNS+V++++C+G+ CQ++
Sbjct  203  SGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKF  262

Query  259  KSSDEAAAAVVKVLGDRSIRTCRETSECTSGGADNQPGSTVAGTGFSPVLEDATKTNLEQ  318
            K+S+EAAAAVVKVLGDRSIRTC++++EC SGG DN  G+T+AGTGF+P+LED+TK NLEQ
Sbjct  263  KNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQ  322

Query  319  LSKLVNGQLQPTADNLAALKTGSLVVTRGVIQALRDDPDRAALVQRLAGELAMSDTVEAA  378
            L KLVNG   PT  NL  +K+GSL VTRGVI+AL+ DPD +ALVQRLAGELAMSDT+E++
Sbjct  323  LVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETG  382

Query  379  LTMRRMLTTGESEPNAAEQPEAIAEGDRRVDALDRELNALRNEMELRKSISSNSLLTTLE  438
            L+MRRMLTTG+SEPNAA+QP+A+AE+DRR++ALDRELN+L+ EMELR+ ++ N+ L  + 
Sbjct  383  LAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVA  442

Query  439  RQGERNQDNQLQQKAGNQDQGFSQMGQPQPGGN  471
            R+ +R+  N  ++   N D  +S++   +PG++
Sbjct  443  REENRSVTNPQKESQTNADTRLSELETRKPGDS  475

30) XNC1_3574 in NC_014228


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  435 bits (1637),  Expect = 4e-123, Method: Compositional matrix adjust.
 Identities = 257/436 (59%), Positives = 356/436 (82%), Gaps = 3/436 (0%)

Query  38   GYGAQSSGAVSDTLFYTLGGGPVISEPASRGGSTRLAGLELGWRSDLMCGNFDLKTTVSN  97
            GYG   +GAVSD LFY++GGG+VIS P++  G  R+ GL+ G  SDLMCGNFD+KTTV+N
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRI-GLDAGLSSDLMCGNFDIKTTVGN  93

Query  98   QLNGITAGMKNLMSEVIQGATGAVASLPAMIIQRANPGLYDMLTNGVLQANVAFDKAQFN  157
            QLNG+T G K+LM++VI GATGAV+S+PAMI+QRANPGLY+M+TNGVLQA +AFDK+++N
Sbjct  94   QLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLN  153

Query  158  CQNMARRMGDFAQNNK--WSQSASLQEYKNQVNGGDADAVrannagtratgtggHPWIGG  215
            C++MA +++D++  +K  W++SA  +EYK+ V+++++DA+RA++A T+A+G  G  W+GG
Sbjct  154  CESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGG  213

Query  216  RKQGGKGQSAIRPTRDLASAGFNMMNHQPVLSTAAIRHQDCSGSSCTKFSSAREAAEAVV  275
            +K GGKGQ+AI+PTRDLA AG+NMMN+ +V S +++    C GS+C KF ++ EAA AVV
Sbjct  214  KKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVV  273

Query  276  NVLGDRAIRTCANAAECISGGEAHQPGTTVAGTGFAPMLEAQTQANMEQLVKLVNGTEKP  335
            +VLGDR+IRTC +A+EC SGG  +  GTT+AGTGFAPMLE  T+ N+EQLVKLVNGTE P
Sbjct  274  KVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAP  333

Query  336  TAPNLAKLKTGSLTITRGVIQALQRDPDNAALTARLAGELAMAETTETALLMRRMLITGM  395
            T +NL K+K+GSL +TRGVI+AL+RDPD +AL  RLAGELAM++T ET+L MRRML TG 
Sbjct  334  TQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQ  393

Query  396  SEPNAAAQAEALNEGERRIAALDREITALKNEMTLKQELARNSILTIIARENHRIEAHPQ  455
            SEPNAA Q++A+ E++RRI ALDRE+ +LK EM L++E+A+N+ L ++ARE++R  ++PQ
Sbjct  394  SEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQ  453

Query  456  KHVTESSDKRFYQLEN  471
            K+   ++D R+ +LE 
Sbjct  454  KESQTNADTRLSELET  469

31) UMNK88_5045 in NC_017641


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  432 bits (1628),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 274/434 (64%), Positives = 362/434 (84%), Gaps = 3/434 (0%)

Query  48   GYGKSIDGAISDKLFYTLGGGSVISQPATRSNMKKLGVDIGWSSNLMCGNFDLKTTVSNQ  107
            GYGKS++GA+SDKLFY++GGGSVIS P+T   MK++G+D G SS+LMCGNFD+KTTV+NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  108  LNGVTDGFKNLMGDVIQGATGAVASLPAMVIQRANPGLYDALTNGVLQANVAFDKAQLNC  167
            LNGVT+GFK+LMGDVI GATGAV+S+PAM++QRANPGLY+ +TNGVLQA +AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  168  QNMAKRMMEFS--DSSKWTQAAVMEEYKSLVNSGEADAIRIDHQAQNFKGNSGRSWIGGQ  225
            ++MA+++ +++  D S WT++AV EEYK  V+++ +DA+R ++   +  G+ G +W+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  226  KRGGAGQPAIRPTHDLAAAGFNMMNNLPvtststvgstsctgsvcsKFSNaeeaakavvk  285
            K GG GQPAI+PT+DLA AG+NMMNNL+VTS STV++ SC GS C KF N+EEAA AVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  286  vLGDRTMRTCSKANECTSGG-EEQQSGAIAGTGFTPMLEEAVKVNTEQLVKLVNGTEKPT  344
            VLGDR++RTC  A EC SGG ++ Q+ +IAGTGF+PMLE++ K N EQLVKLVNGTE PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  345  AANLAKLRSGSLTVTAGVIKALQRDPDNAALTGRLAGELAMADTVETALLMRRMIVTGMS  404
             ANL K++SGSL VT GVI AL+RDPD +AL  RLAGELAM+DT+ET+L MRRM+ TG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  405  EPNAMLQDDALAEGERRIEALDREIAALKNEMELKRELARNSVLTIIERENQRVGVNPQT  464
            EPNA  Q +A+AE++RRIEALDRE+ +LK EMEL+RE+A+N+ L ++ RE++R   NPQ 
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  465  ESADSSDTRINQLE  478
            ES  ++DTR+++LE
Sbjct  455  ESQTNADTRLSELE  468

32) SerAS12_0301 in NC_015566


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  432 bits (1628),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 273/433 (64%), Positives = 367/433 (85%), Gaps = 2/433 (0%)

Query  57   GYGKSASGAVSDKLFYSLGGGSVISQPATRGNMQRLGMNLGWSSDLMCGNFDLKTTIGNQ  116
            GYGKS +GAVSDKLFYS+GGGSVIS P+T   M+R+G++ G SSDLMCGNFD+KTT+GNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  117  LNGVTDGFKNLMGSVIQGATGAVASLPAMAIQRANPGLYEMLTNGVLQGGVAFDKAQLNC  176
            LNGVT+GFK+LMG VI GATGAV+S+PAM +QRANPGLYEM+TNGVLQ+G+AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  177  QNLSKRMMD--MADTGGWSQAAAMEEAKSLVNNGDADAVRSMNATEKVTGQSGQTWIGGQ  234
            +++++++ D  ++D ++W+++A  EE K  V+ +++DA+R+ +A  K +G+ G TW+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  235  KRGGAGQPAIKPTHDLAAAGYNMMNALPvtstssvsgssctggscAKYasseeaaaavvK  294
            K GG GQPAI+PT+DLA AGYNMMN L+VTS S+VS++SC G++C K+ +SEEAAAAVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  295  VLGDSSLRTCKDAAQCTSGEGSEQPGSTVAGTGFAPMLEEATKANNEQLAKLVNGAEKPT  354
            VLGD S+RTCKDA++C SG   +  G+T+AGTGFAPMLE++TK N EQL KLVNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  355  TANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIETAFIMRRMITTGMS  414
             ANL K+K+GSL VT GVI AL+RDPD +ALV RLA+ELAM+DTIET++ MRRM+TTG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  415  EPNASAQKVAMEEGDRRIEALDREITALKNEMEMKREISRNAVLTIIDRENNRAETNPQR  474
            EPNA+ Q  AM E+DRRIEALDRE+ +LK EME++RE+++N+ L ++ RE+NR+ TNPQ+
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  475  QSVDSPDTKFNQL  487
            +S  ++DT++++L
Sbjct  455  ESQTNADTRLSEL  467

33) SerAS13_0300 in NC_017573


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  432 bits (1628),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 273/433 (64%), Positives = 367/433 (85%), Gaps = 2/433 (0%)

Query  57   GYGKSASGAVSDKLFYSLGGGSVISQPATRGNMQRLGMNLGWSSDLMCGNFDLKTTIGNQ  116
            GYGKS +GAVSDKLFYS+GGGSVIS P+T   M+R+G++ G SSDLMCGNFD+KTT+GNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  117  LNGVTDGFKNLMGSVIQGATGAVASLPAMAIQRANPGLYEMLTNGVLQGGVAFDKAQLNC  176
            LNGVT+GFK+LMG VI GATGAV+S+PAM +QRANPGLYEM+TNGVLQ+G+AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  177  QNLSKRMMD--MADTGGWSQAAAMEEAKSLVNNGDADAVRSMNATEKVTGQSGQTWIGGQ  234
            +++++++ D  ++D ++W+++A  EE K  V+ +++DA+R+ +A  K +G+ G TW+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  235  KRGGAGQPAIKPTHDLAAAGYNMMNALPvtstssvsgssctggscAKYasseeaaaavvK  294
            K GG GQPAI+PT+DLA AGYNMMN L+VTS S+VS++SC G++C K+ +SEEAAAAVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  295  VLGDSSLRTCKDAAQCTSGEGSEQPGSTVAGTGFAPMLEEATKANNEQLAKLVNGAEKPT  354
            VLGD S+RTCKDA++C SG   +  G+T+AGTGFAPMLE++TK N EQL KLVNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  355  TANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIETAFIMRRMITTGMS  414
             ANL K+K+GSL VT GVI AL+RDPD +ALV RLA+ELAM+DTIET++ MRRM+TTG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  415  EPNASAQKVAMEEGDRRIEALDREITALKNEMEMKREISRNAVLTIIDRENNRAETNPQR  474
            EPNA+ Q  AM E+DRRIEALDRE+ +LK EME++RE+++N+ L ++ RE+NR+ TNPQ+
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  475  QSVDSPDTKFNQL  487
            +S  ++DT++++L
Sbjct  455  ESQTNADTRLSEL  467

34) SerAS9_0301 in NC_015567


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  432 bits (1628),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 273/433 (64%), Positives = 367/433 (85%), Gaps = 2/433 (0%)

Query  57   GYGKSASGAVSDKLFYSLGGGSVISQPATRGNMQRLGMNLGWSSDLMCGNFDLKTTIGNQ  116
            GYGKS +GAVSDKLFYS+GGGSVIS P+T   M+R+G++ G SSDLMCGNFD+KTT+GNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  117  LNGVTDGFKNLMGSVIQGATGAVASLPAMAIQRANPGLYEMLTNGVLQGGVAFDKAQLNC  176
            LNGVT+GFK+LMG VI GATGAV+S+PAM +QRANPGLYEM+TNGVLQ+G+AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  177  QNLSKRMMD--MADTGGWSQAAAMEEAKSLVNNGDADAVRSMNATEKVTGQSGQTWIGGQ  234
            +++++++ D  ++D ++W+++A  EE K  V+ +++DA+R+ +A  K +G+ G TW+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  235  KRGGAGQPAIKPTHDLAAAGYNMMNALPvtstssvsgssctggscAKYasseeaaaavvK  294
            K GG GQPAI+PT+DLA AGYNMMN L+VTS S+VS++SC G++C K+ +SEEAAAAVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  295  VLGDSSLRTCKDAAQCTSGEGSEQPGSTVAGTGFAPMLEEATKANNEQLAKLVNGAEKPT  354
            VLGD S+RTCKDA++C SG   +  G+T+AGTGFAPMLE++TK N EQL KLVNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  355  TANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIETAFIMRRMITTGMS  414
             ANL K+K+GSL VT GVI AL+RDPD +ALV RLA+ELAM+DTIET++ MRRM+TTG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  415  EPNASAQKVAMEEGDRRIEALDREITALKNEMEMKREISRNAVLTIIDRENNRAETNPQR  474
            EPNA+ Q  AM E+DRRIEALDRE+ +LK EME++RE+++N+ L ++ RE+NR+ TNPQ+
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  475  QSVDSPDTKFNQL  487
            +S  ++DT++++L
Sbjct  455  ESQTNADTRLSEL  467

35) PMI2572 in NC_010554


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  431 bits (1622),  Expect = 5e-122, Method: Compositional matrix adjust.
 Identities = 238/434 (55%), Positives = 350/434 (81%), Gaps = 2/434 (0%)

Query  40   GYGANVSGAVSDKLYYNLGGGTVLSQPPGRSNLQRLGMSMGWNSDLMCGNFDIKTTVGNQ  99
            GYG +V+GAVSDKL+Y++GGG+V+S P     ++R+G+  G +SDLMCGNFDIKTTVGNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  100  LNGVTAGFKNLMSEVIQNATGAVASLPAMAIQRANPGLYEMLTNGVLQANVAFDKAQLNC  159
            LNGVT GFK+LM++VI  ATGAV+S+PAM +QRANPGLYEM+TNGVLQA +AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  160  QNMAKRMMDFS--ENNQWTQAAILEEAKNIINNSDGDAVKTDQQIQQSSGDKGVVWIGGK  217
            ++MA+++ D++  +++ WT++A+ EE K+ ++ S+GDA+++++   ++SG  G  W+GGK
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  218  QRGGVGQPAIQPAQDFAQAGFNIMNGLPATSTAPVPAGQCNGAACRRFANSEEAAQVVTQ  277
            + GG GQPAIQP++D+A+AG+N+MN L+ TS + V+AG C+G+AC++F NSEEAA  V +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  278  VLGSKSVRTCTNPADCQSGGEAEQPGSSQPGTGLAPVLETTTRENLEQLHKLVNSRGAVG  337
            VLG +S+RTC ++++C SGG  +  G++ +GTG+AP+LE TT+ENLEQL KLVN+  A  
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  338  AAELAKLKTGSLTVSRGVIEALRRDPDKTALTQRLAGELAMADTMELALTMRRMLITGQG  397
             A+L K+K+GSL V+RGVI+AL+RDPD  AL QRLAGELAM+DT+E +L+MRRML TGQ+
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  398  EPNAGNFPKAQEIGNQSVDQLDREIGMLQTEMEVRKSIANNAMLTVIERDQQRTQANPAT  457
            EPNA++ P+A   +++ ++ LDRE+  L+ EME+R+ +A+N+ L V+ R+++R+ +NP  
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  458  QTPDNTDVRVQGLE  471
            ++  N+D R+  LE
Sbjct  455  ESQTNADTRLSELE  468

36) Spro_4073 in NC_009832


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  425 bits (1600),  Expect = 3e-120, Method: Compositional matrix adjust.
 Identities = 275/440 (63%), Positives = 371/440 (85%), Gaps = 2/440 (0%)

Query  56   GYGKSASGAVSDKLFYSLGGGSVISQPATRGNMQRLGMNLGWSSDLMCGNFDLKTTIGNQ  115
            GYGKS +GAVSDKLFYS+GGGSVIS P+T   M+R+G++ G SSDLMCGNFD+KTT+GNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  116  LNGVTDGFKNLMGSVIQGATGAVASLPAMAIQRANPGLYEMLTNGVLQGGVAFDKAQLNC  175
            LNGVT+GFK+LMG VI GATGAV+S+PAM +QRANPGLYEM+TNGVLQ+G+AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  176  QNLSKRMMD--MADSGGWSQAAAMEEAKSLINNGDADAVRSMNATEKVTGQSGQTWIGGQ  233
            +++++++ D  ++D ++W+++A  EE K  ++ +++DA+R+ +A  K +G+ G TW+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  234  KRGGAGQPAIKPTHDLAAAGYNMMNALPvtstssvsgssctggacakyasseeaaaavvk  293
            K GG GQPAI+PT+DLA AGYNMMN L+VTS S+VS++SC G+AC K+ +SEEAAAAVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  294  VLGDSSLRTCKDAAQCTSGEGSEQPGSTVAGTGFAPMLEEATKENNQQLAKLVNGAEKPT  353
            VLGD S+RTCKDA++C SG   +  G+T+AGTGFAPMLE++TKEN +QL KLVNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  354  AANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIETAFIMRRMVTTGMS  413
             ANL K+K+GSL VT GVI AL+RDPD +ALV RLA+ELAM+DTIET++ MRRM+TTG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  414  EPNAAVQKMAMEEGDRRIEALDREITALKNEMEMKREIARNAVLTIIDRENNRAETNPQR  473
            EPNAA Q  AM E+DRRIEALDRE+ +LK EME++RE+A+N+ L ++ RE+NR+ TNPQ+
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  474  QSVDSPDTKFNQLAVPESDQ  493
            +S  ++DT++++L    +++
Sbjct  455  ESQTNADTRLSELETRKPGD  474

37) YPZ3_0323 in NC_014029


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  425 bits (1599),  Expect = 4e-120, Method: Compositional matrix adjust.
 Identities = 275/440 (63%), Positives = 371/440 (85%), Gaps = 2/440 (0%)

Query  56   GYGKSASGAVSDKLFYSLGGGSVISQPATRGNMQRLGMNLGWSSDLMCGNFDLKTTIGNQ  115
            GYGKS +GAVSDKLFYS+GGGSVIS P+T   M+R+G++ G SSDLMCGNFD+KTT+GNQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  116  LNGVTDGFKNLMGSVIQGATGAVGSLPAMAIQRANPGLYEMLTNGVLQGGVAFDKAQLNC  175
            LNGVT+GFK+LMG VI GATGAV+S+PAM +QRANPGLYEM+TNGVLQ+G+AFDK++LNC
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  176  QNLSKRMMD--MADSGGWSQAAAMEEAKSLINNGDADAVRSMNATEKVTGQSGQTWIGGQ  233
            +++++++ D  ++D ++W+++A  EE K  ++ +++DA+R+ +A  K +G+ G TW+GG+
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  234  KRGGAGQPAIKPTHDLAAAGYNMMNALPvtstssvsgssctggacakyasseeaaaavvk  293
            K GG GQPAI+PT+DLA AGYNMMN L+VTS S+VS++SC G+AC K+ +SEEAAAAVVK
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  294  VLGDSSLRTCKDAAQCTSGEGSEQPGSTVAGTGFAPMLEEATKENNEQLAKLVNGAEKPT  353
            VLGD S+RTCKDA++C SG   +  G+T+AGTGFAPMLE++TKEN EQL KLVNG+E PT
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  354  AANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIETAFIMRRMVTTGMS  413
             ANL K+K+GSL VT GVI AL+RDPD +ALV RLA+ELAM+DTIET++ MRRM+TTG S
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  414  EPNAAVQKMAMEEGDRRIEALDREITALKNEMEMKREISRNAVLTIIDRENNRAETNPQR  473
            EPNAA Q  AM E+DRRIEALDRE+ +LK EME++RE+++N+ L ++ RE+NR+ TNPQ+
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  474  QSVDSPDTKFNQLAVPESDQ  493
            +S  ++DT++++L    +++
Sbjct  455  ESQTNADTRLSELETRKPGD  474

38) LF82_693 in NC_011993


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  411 bits (1546),  Expect = 6e-116, Method: Compositional matrix adjust.
 Identities = 262/466 (57%), Positives = 381/466 (82%), Gaps = 7/466 (1%)

Query  10   GVLVGCFALSLPAQAVFD---LDNDVINTDS-SKGVKGAVNDNLFYTIGGGTVISQPPSN  65
            ++L  C+ L++ + + +    LD   ++ D+ +K+V+GAV+D+LFY+IGGG+VIS P + 
Sbjct  5    SILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTM  64

Query  66   NNMEKLGMGIGWNSDLMCGNFDINTTVKNQLNGVTSGFKDMMSNVISSATGAVASLPAMI  125
              M ++G++ G +SDLMCGNFDI+TTV NQLNGVT+GFKD+M++VI++ATGAV+S+PAMI
Sbjct  65   YGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMI  124

Query  126  IQRANPGLYELLTNGVLQANVSFDKAQLNCQNMSKKMADYTMS--SQWTQAAIGEEFKNI  183
            +QRANPGLYE++TNGVLQA ++FDK++LNC++M++K+ADYT++  S WT++A+ EE+K+ 
Sbjct  125  LQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEA  184

Query  184  VSTTP-DAVAADNQLKTSTGKEGVKWIGGQKRGGSGQPAIKPTHDLAKAGFNILNKQPVT  242
            VS++  DA+ A++    ++GKEG  W+GG+K GG GQPAI+PT+DLAKAG+N++N+ +VT
Sbjct  185  VSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVT  244

Query  243  snggvsgsscngsLCKKYKTSEEAAEAVVKVLGDRAIRTCSEASECSSGGLENEPGASSA  302
            SN+ VS++SC+GS C+K+K SEEAA AVVKVLGDR+IRTC +A+EC+SGG++N  G++ A
Sbjct  245  SNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIA  304

Query  303  GVGFSPMLEETTKENMEALVKLVNGSLEPNATNLAILKTGDLAVSRGVIQALKDDPDNVA  362
            G GF+PMLE+TTKEN+E LVKLVNG+  P  +NL  +K+G L V+RGVI+ALK DPD  A
Sbjct  305  GTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGA  364

Query  363  LVQRLASELAMSETITTALGMRRMLMAGQSEPNAADQTMAldesdrrlefldrellalKN  422
            LVQRLA+ELAMS+TI T+L+MRRML +GQSEPNAADQ  A+ E+DRR+E LDREL +LK 
Sbjct  365  LVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKL  424

Query  423  EMEIRKEISNNSILMALTRQESREADHGLRQSTQQNDDAVQNLNEK  468
            EME+R+E+++N+ L+ ++R+E+R   +  ++S  + D  + +L+ +
Sbjct  425  EMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETR  470

39) NRG857_20935 in NC_017634


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  411 bits (1546),  Expect = 6e-116, Method: Compositional matrix adjust.
 Identities = 262/466 (57%), Positives = 381/466 (82%), Gaps = 7/466 (1%)

Query  10   GVLVGCFALSLPAQAVFD---LDNDVINTDS-SKGVKGAVNDNLFYTIGGGTVISQPPSN  65
            ++L  C+ L++ + + +    LD   ++ D+ +K+V+GAV+D+LFY+IGGG+VIS P + 
Sbjct  5    SILSVCLMLGIVSSGPLSAALLDAPTLSGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTM  64

Query  66   NNMEKLGMGIGWNSDLMCGNFDINTTVKNQLNGVTSGFKDMMSNVISSATGAVASLPAMI  125
              M ++G++ G +SDLMCGNFDI+TTV NQLNGVT+GFKD+M++VI++ATGAV+S+PAMI
Sbjct  65   YGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMI  124

Query  126  IQRANPGLYELLTNGVLQANVSFDKAQLNCQNMSKKMADYTMS--SQWTQAAIGEEFKNI  183
            +QRANPGLYE++TNGVLQA ++FDK++LNC++M++K+ADYT++  S WT++A+ EE+K+ 
Sbjct  125  LQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEA  184

Query  184  VSTTP-DAVAADNQLKTSTGKEGVKWIGGQKRGGSGQPAIKPTHDLAKAGFNILNKQPVT  242
            VS++  DA+ A++    ++GKEG  W+GG+K GG GQPAI+PT+DLAKAG+N++N+ +VT
Sbjct  185  VSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVT  244

Query  243  snggvsgsscngsLCKKYKTSEEAAEAVVKVLGDRAIRTCSEASECSSGGLENEPGASSA  302
            SN+ VS++SC+GS C+K+K SEEAA AVVKVLGDR+IRTC +A+EC+SGG++N  G++ A
Sbjct  245  SNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIA  304

Query  303  GVGFSPMLEETTKENMEALVKLVNGSLEPNATNLAILKTGDLAVSRGVIQALKDDPDNVA  362
            G GF+PMLE+TTKEN+E LVKLVNG+  P  +NL  +K+G L V+RGVI+ALK DPD  A
Sbjct  305  GTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGA  364

Query  363  LVQRLASELAMSETITTALGMRRMLMAGQSEPNAADQTMAldesdrrlefldrellalKN  422
            LVQRLA+ELAMS+TI T+L+MRRML +GQSEPNAADQ  A+ E+DRR+E LDREL +LK 
Sbjct  365  LVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKL  424

Query  423  EMEIRKEISNNSILMALTRQESREADHGLRQSTQQNDDAVQNLNEK  468
            EME+R+E+++N+ L+ ++R+E+R   +  ++S  + D  + +L+ +
Sbjct  425  EMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETR  470

40) KPHS_44890 in NC_016845


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  404 bits (1519),  Expect = 8e-114, Method: Compositional matrix adjust.
 Identities = 238/438 (55%), Positives = 366/438 (84%), Gaps = 3/438 (0%)

Query  35   SGNDTSRQVQGGINDDLYYAIGGGTVVSNPPSGNRLNKIGMGVGWNADLMCGNFDVKTTV  94
            SG++ ++ V+G+++D L+Y+IGGG+V+S P +   +++IG++ G ++DLMCGNFD+KTTV
Sbjct  32   SGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTV  91

Query  95   KNQLNGLTSGFKDMMGDVISSATGAVASLPAMVIQRANPGLYELLTNGTLQANAYFDKAQ  154
             NQLNG+T+GFKD+MGDVI++ATGAV+S+PAM++QRANPGLYE++TNG LQA   FDK++
Sbjct  92   GNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSK  151

Query  155  LNCQAMSKKLADHTLS--GPWVQAAVGEEYQNALSGTS-DAVKADQQLSKSTGTEGVSWV  211
            LNC++M++KLAD TL+  ++W ++AV EEY++A+S+++ DA++A++  +K++G EG +WV
Sbjct  152  LNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWV  211

Query  212  ggkkrggkgQAAIRPTHDIARAGYNILNKQaadssasisesaCNGALCRKYKNGDEAAQV  271
            GGKK GGKGQ+AI+PT+D+A+AGYN++N+ +  S++++S ++C+G+ C+K+KN++EAA  
Sbjct  212  GGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAA  271

Query  272  VASVLGDRSIRTCKSGNECASGGLENEpgtttpgtgftpMLDETTQKNYEVLVELVNGSL  331
            V  VLGDRSIRTCK + EC+SGG++N  GTT +GTGF+PML++TT+ N E LV LVNG+ 
Sbjct  272  VVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTE  331

Query  332  PVNAANLAKLKTGDLTVTRGVVQALKDDPDNTALVQRLASELAMADTVATAFGMRRMLTA  391
            +   ANL K+K+G L VTRGV++ALK DPD  ALVQRLA+ELAM+DT+ T+++MRRMLT+
Sbjct  332  APTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTT  391

Query  392  GQSEPHVAEQQEALTEAERRLEFLDREIVALKNEMELRKQISNNTIVTALSRQTQRGLEN  451
            GQSEP+ A+Q +A++EA+RR+E LDRE+ +LK EMELR+++++NT +  ++R+ +R++ N
Sbjct  392  GQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTN  451

Query  452  SARQKNPDADEAVQQLGT  469
            + ++ + +AD  + +L T
Sbjct  452  PQKESQTNADTRLSELET  469

41) N559_0816 in NC_022082


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  403 bits (1517),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 238/438 (55%), Positives = 366/438 (84%), Gaps = 3/438 (0%)

Query  37   SGNDTSRQVQGGINDDLYYAIGGGTVVSNPPSGNRLNKIGMGVGWNADLMCGNFDVKTTV  96
            SG++ ++ V+G+++D L+Y+IGGG+V+S P +   +++IG++ G ++DLMCGNFD+KTTV
Sbjct  32   SGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTV  91

Query  97   KNQLNGLTSGFKDMMGDVISSATGAVASLPAMVIQRANPGLYELLTNGTLQANAYFDKAQ  156
             NQLNG+T+GFKD+MGDVI++ATGAV+S+PAM++QRANPGLYE++TNG LQA   FDK++
Sbjct  92   GNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSK  151

Query  157  LNCQAMSKKLADHTLS--GPWVQAAVGEEYQNALSGTS-DAVKADQQLSKSTGTEGVSWV  213
            LNC++M++KLAD TL+  ++W ++AV EEY++A+S+++ DA++A++  +K++G EG +WV
Sbjct  152  LNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWV  211

Query  214  ggkkrggkgQAAIRPTHDIARAGYNILNKQaadssasisesaCNGALCRKYKNGDEAAQV  273
            GGKK GGKGQ+AI+PT+D+A+AGYN++N+ +  S++++S ++C+G+ C+K+KN++EAA  
Sbjct  212  GGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAA  271

Query  274  VASVLGDRSIRTCKSGNECASGGLENEpgtttpgtgftpMLDETTQKNYEVLVELVNGSL  333
            V  VLGDRSIRTCK + EC+SGG++N  GTT +GTGF+PML++TT+ N E LV LVNG+ 
Sbjct  272  VVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTE  331

Query  334  PVNAANLAKLKTGDLTVTRGVVQALKDDPDNTALVQRLASELAMADTVATAFGMRRMLTA  393
            +   ANL K+K+G L VTRGV++ALK DPD  ALVQRLA+ELAM+DT+ T+++MRRMLT+
Sbjct  332  APTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTT  391

Query  394  GQSEPHVAEQQEALTEAERRLEFLDREIVALKNEMELRKQISNNTIVTALSRQTQRGLEN  453
            GQSEP+ A+Q +A++EA+RR+E LDRE+ +LK EMELR+++++NT +  ++R+ +R++ N
Sbjct  392  GQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTN  451

Query  454  SARQKNPDADEAVQQLGT  471
            + ++ + +AD  + +L T
Sbjct  452  PQKESQTNADTRLSELET  469

42) CKO_03489 in NC_009792


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  291 bits (1089),  Expect = 7e-80, Method: Compositional matrix adjust.
 Identities = 191/449 (43%), Positives = 317/449 (71%), Gaps = 13/449 (2%)

Query  16   ADDKYQYKQQGAISDWMYYRIGGGAAISPPPTR--RNTFPLTAGVSWNSDMMCGNFDIDT  73
            ++D Y    +GA+SD ++Y IGGG+ IS P T    + + L AG+S  SD+MCGNFDI T
Sbjct  32   SGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLS--SDLMCGNFDIKT  89

Query  74   TVRNQLNGVTDGFQQLMGEVIESATSAVASLPAMVIQRANPQLYDLLTNGVLQGRLDFDK  133
            TV NQLNGVT+GF++LMG+VI +AT+AV+S+PAM++QRANP LY+++TNGVLQ+ L FDK
Sbjct  90   TVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDK  149

Query  134  SLLSCQNMAGKMTDYALG--PAWTQSAQAENY-QGIAASEKDAVRADQRaaeeaaeKGKR  190
            S L+C++MA K++DY+LG  ++WT+SA  E+Y ++++AS  DA+RA++  +  ++  G  
Sbjct  150  SKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGAT  209

Query  191  WVGGEHRGGKGQPPIKLIRDTTVAGYNILNNRSATSTGSVSGSDCQGELCQVWSKPDDAA  250
            WVGG   GGKGQP+I+  RD + AGYN++NN S TS ++VS++ C+G  CQ   ++++AA
Sbjct  210  WVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAA  269

Query  251  QWLTRVVGEQTINVAPDNDQSGGT---DQQSGAQSGVGLTPLIQE-EKDKIQPLIIDMVN  306
              + +V+G+++I    D  + G+    + Q+ + +G G++P++++  K++++ L + +VN
Sbjct  270  AAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQL-VKLVN  328

Query  307  RSQPVNDDTLAQASGGELHLTRGVIEALRDDPDAAVLIQRLSGELALSRVMEQALMARRT  366
             +++  +  L +  +G L +TRGVI+AL+ DPDA+ L+QRL+GELA+S  +E +L  RR 
Sbjct  329  GTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRM  388

Query  367  LLAGMREPNVSGekeaqtaltqttaqldqelSQLKLELDMRQALADNAALTILERQTMRA  426
            L +G  EPN +++ +A +   +    LD+EL+ LKLE+++R+ +A N+AL ++ R+  R+
Sbjct  389  LTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRS  448

Query  427  KTKGQAVGVEDDTDKRVDDLSKPTGGEAQ  455
             T+ Q  + + ++D R+ +L     G++Q
Sbjct  449  VTNPQKES-QTNADTRLSELETRKPGDSQ  476

43) XCAW_01694 in NC_020815


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  285 bits (1068),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 181/440 (42%), Positives = 301/440 (69%), Gaps = 15/440 (3%)

Query  37   NGF-QANGPVIGDEVMYSIGGGSAVSM-GRAAGMRSIGVGAGWNSNLICGDMNIQTTLKN  94
            +G+ ++    ++D + YSIGGGS +S  G   GM+ IG++AG +S+L+CG+ +I+TT+ N
Sbjct  34   DGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGN  93

Query  95   QLNGVTNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLT  154
            QLNGVTNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL 
Sbjct  94   QLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLN  153

Query  155  CRAMAEKMAE-TAGGQLGWSQMAQGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVGG  211
            C +MA+K+A+ T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG
Sbjct  154  CESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGG  213

Query  212  SNAGGAGQPAIRVVGDVTRAGYNLVNGRSVTDTSSIAQASCASLSCQTWTSPQQAVEWAT  271
             +AGG GQPAI+   D+++AGYN++N  SVT  S+++ +SC + +CQ   ++++A     
Sbjct  214  KKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVV  273

Query  272  RVLGEKEQRTCDA---C-------TKTETVPGVGLTPLIQEEYEAKLEALQELISGTRNT  321
            +VLG++  RTC     C       ++  T++G G++P++++    +LE L  L++GT   
Sbjct  274  KVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAP  333

Query  322  TFENLRVAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGK  381
            T  NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+
Sbjct  334  TQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQ  393

Query  382  KEPNVAANELAVETVNHESDTLDREIQNLKTELELRRELANNSPMAIIQRHGTRAAGSRG  441
             EPN A +  A+   ++  ++LDRE+++LK E+ELRRE+A+N+++ ++ R+  R+  +  
Sbjct  394  SEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQ  453

Query  442  IYEGDPVPDRLDQLQKGNPG  461
                     RL +L+  +PG
Sbjct  454  KESQTNADTRLSELETRKPG  473

44) Tola_2449 in NC_012691


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  283 bits (1058),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 182/438 (42%), Positives = 301/438 (69%), Gaps = 14/438 (3%)

Query  41   QTSGSVIGDEVMYSIGGGNAVSMSGAA-GMRSIGVGAGWNSNLICGDMSISTTIQNQLNG  99
            ++  + ++D + YSIGGG+ +S +G+  GM+ IG++AG +S+L+CG+  I TT+ NQLNG
Sbjct  38   KSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNG  97

Query  100  LTNGFQNIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRSM  159
            +TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C SM
Sbjct  98   VTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESM  157

Query  160  AERMADMA-GGQLGWSQMAEGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVggnnag  216
            A+++AD + G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG++AG
Sbjct  158  ANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAG  217

Query  217  gagQPAIRVVSDVTRAGYNLVNGRSVTDASAIDAASCNSLACQTWTSPQEAIDWATRVLG  276
            G GQPAI+   D+++AGYN++N  SVT  S++ A+SC++ ACQ   +++EA     +VLG
Sbjct  218  GKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLG  277

Query  277  EQEQRTCDA---C-------TKTETVPGVGLTPLIQEEYDTKLQTLQELIDGTRNTTFEN  326
            ++  RTC     C       ++  T++G G++P++++    +L+ L  L++GT   T  N
Sbjct  278  DRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQAN  337

Query  327  LRDAGSVSLPITRGVIEALRDEPDQHVLAQRLASEVALASVLEKALLLQRTLLTGRKEPn  386
            L    S SL +TRGVI+AL+ +PD   L QRLA+E+A++  +E +L ++R L TG+ EPN
Sbjct  338  LDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPN  397

Query  387  vaanqlavaavDQESGALDREISNLKTELELRRTLANNSPMAIIQRHSTRAAGSRGIYEG  446
             A +  A+A  D+   ALDRE+++LK E+ELRR +A+N+++ ++ R+  R+  +      
Sbjct  398  AADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQ  457

Query  447  DPVPDRLDQLQRPNPGGT  464
                 RL +L+  +PG++
Sbjct  458  TNADTRLSELETRKPGDS  475

45) XC_1041 in NC_007086


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 176/428 (42%), Positives = 293/428 (69%), Gaps = 14/428 (3%)

Query  1    MYSIGGGNAVSMSGAA-GMRSIGVGAGWNSNLVCGDMNISTTIQNQLNGLTNGFQNIMGN  59
             YSIGGG+ +S +G+  GM+ IG++AG +S+L+CG+ +I TT+ NQLNG+TNGF+++MG+
Sbjct  49   FYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGD  108

Query  60   VIQSATSAVASLPALIIQRADHGLYNLLTNGVLQARLDFDRSKLTCRAMAERMAQ-TAGG  118
            VI +AT+AV+S+PA+I+QRA+ GLY+++TNGVLQA L FD+SKL C +MA+++A+ T G+
Sbjct  109  VITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGD  168

Query  119  QLGWNQIAEGMALRQAVTST--DAVSAIEKAETTRGNDGVPWVggnnaggagQSSIKVVA  176
            + +W + A     ++AV+++  DA+ A E    + G++G  WVGG++AGG GQ++I+   
Sbjct  169  KSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTR  228

Query  177  DVTRAGYNLVNGRSVTDTSSIDATSCNSLACQTWPTPQAATEWATRVLGEQEQRTCED--  234
            D+++AGYN++N  SVT  S++ A SC++ ACQ    ++ A+    +VLG++  RTC D  
Sbjct  229  DLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDAT  288

Query  235  -C-------TKTQTMPGVGLTPLIQEEYEAKLQSLQELIDGTRNTTFENLRAAGSTSLPI  286
             C       ++  T++G G++P++++    +L+ L  L++GT   T  NL    S SL +
Sbjct  289  ECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKV  348

Query  287  TRGVIEALRDEPDQDILARRLASEVALSSVLEKALLLQRTLLTGQKEPNVSANQLAVEAI  346
            TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TGQ EPN + +  A+   
Sbjct  349  TRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEA  408

Query  347  NHESNTLDREIQNLKTELELRRELANNSPMAIIQRHGTRASGSRGVYEGDPVPDRLDQLQ  406
            ++  ++LDRE+++LK E+ELRRE+A+N+++ ++ R+  R+  +           RL +L+
Sbjct  409  DRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELE  468

Query  407  RPSPGRVQ  414
               PG  Q
Sbjct  469  TRKPGDSQ  476

46) XCC3116 in NC_003902


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 176/428 (42%), Positives = 293/428 (69%), Gaps = 14/428 (3%)

Query  1    MYSIGGGNAVSMSGAA-GMRSIGVGAGWNSNLVCGDMNISTTIQNQLNGLTNGFQNIMGN  59
             YSIGGG+ +S +G+  GM+ IG++AG +S+L+CG+ +I TT+ NQLNG+TNGF+++MG+
Sbjct  49   FYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGD  108

Query  60   VIQSATSAVASLPALIIQRADHGLYNLLTNGVLQARLDFDRSKLTCRAMAERMAQ-TAGG  118
            VI +AT+AV+S+PA+I+QRA+ GLY+++TNGVLQA L FD+SKL C +MA+++A+ T G+
Sbjct  109  VITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGD  168

Query  119  QLGWNQIAEGMALRQAVTST--DAVSAIEKAETTRGNDGVPWVggnnaggagQSSIKVVA  176
            + +W + A     ++AV+++  DA+ A E    + G++G  WVGG++AGG GQ++I+   
Sbjct  169  KSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTR  228

Query  177  DVTRAGYNLVNGRSVTDTSSIDATSCNSLACQTWPTPQAATEWATRVLGEQEQRTCED--  234
            D+++AGYN++N  SVT  S++ A SC++ ACQ    ++ A+    +VLG++  RTC D  
Sbjct  229  DLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDAT  288

Query  235  -C-------TKTQTMPGVGLTPLIQEEYEAKLQSLQELIDGTRNTTFENLRAAGSTSLPI  286
             C       ++  T++G G++P++++    +L+ L  L++GT   T  NL    S SL +
Sbjct  289  ECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKV  348

Query  287  TRGVIEALRDEPDQDILARRLASEVALSSVLEKALLLQRTLLTGQKEPNVSANQLAVEAI  346
            TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TGQ EPN + +  A+   
Sbjct  349  TRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEA  408

Query  347  NHESNTLDREIQNLKTELELRRELANNSPMAIIQRHGTRASGSRGVYEGDPVPDRLDQLQ  406
            ++  ++LDRE+++LK E+ELRRE+A+N+++ ++ R+  R+  +           RL +L+
Sbjct  409  DRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELE  468

Query  407  RPSPGRVQ  414
               PG  Q
Sbjct  469  TRKPGDSQ  476

47) W5S_1485 in NC_017845


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  282 bits (1056),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 178/441 (41%), Positives = 305/441 (70%), Gaps = 15/441 (3%)

Query  39   GFQNS-GAVIGDEVMYSIGGGNAVSMSGAA-GMRSMGVGVGWNSNLICGDMNISTTIQNQ  96
            G+ +S  + ++D + YSIGGG+ +S +G+  GM+ +G++ G +S+L+CG+ +I TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  97   LNGLTNGFQNIMSNVIQNATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLSC  156
            LNG+TNGF+++M++VI  AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL+C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  157  QAMAERMAD-TAGGQLGWNQIAQGMALRQAVSST--DAVSAIEQAEKNRGNDGVPWVGGS  213
            ++MA+++AD T G++ +W + A     ++AVS++  DA+ A E   K  G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  214  NAGGAGQRSIKVVSDVTRAGYNLVNGRNVADTSSIDTANCQSLSCQTWASPQQAIDFATR  273
            +AGG GQ +I+   D+++AGYN++N  +V+  S++ +++C++ +CQ   ++++A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  274  VLGEQEQRTCED---C-------TKTETVPGVGLTPVIQDEYDTKLEALQALVNGTRNTT  323
            VLG++  RTC D   C       ++  T++G G++P+++D    +LE L  LVNGT   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  324  FENLREAGSASLPITRSVIEALRDEPDQDILARRLASEVALASVLEKALLLQRTLLTGKK  383
              NL    S+SL +TR+VI+AL+ +PD + L +RLA+E+A++  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  384  EPnvaanqlavaavDQESNTLDREILNLKTELELRRELANNSPMAIIQRHSARAADSRGI  443
            EPN A +  A+A  D+  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  444  YEGDPVPNRLDQLQRPSPGGT  464
                    RL +L+   PG++
Sbjct  455  ESQTNADTRLSELETRKPGDS  475

48) Pecwa_1620 in NC_013421


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  281 bits (1052),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 180/441 (41%), Positives = 303/441 (69%), Gaps = 15/441 (3%)

Query  40   GFQNS-GAVIGDEVMYSIGGGNAVSMSGAA-GMRSIGVGVGWNSNLICGDMNISTTIQNQ  97
            G+ +S  + ++D + YSIGGG+ +S +G+  GM+ IG++ G +S+L+CG+ +I TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  98   LNGLTNGFQNIMGNVIQNATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  157
            LNG+TNGF+++MG+VI  AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  158  RAMAEKMAD-TAGGQLGWSQIAEGMALRQAVGSS--DAVSAIEQAEKNRGNAGVPWVGGS  214
             +MA+K+AD T G++ +W++ A     ++AV++S  DA+ A E   K  G+ G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  215  NAGGTGQRSIKVVGDVTRAGYNLVNGRGVTDTAPIDPANCQSLSCQTWASPQQAIDFATR  274
            +AGG GQ +I+   D+++AGYN++N  +VT  + + +++C++ +CQ   ++++A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  275  VLGEQEQRTCEG---C-------TKTETLPGVGLTPVIQDEYDAKLEALQELVSGARHTT  324
            VLG++  RTC +   C       ++  T++G G++P+++D    +LE L  LV+G+   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  325  FENLRKAGSTSLPITRGVIEALRDEPDQDILARRLASEVALASVLEKALLLQRTLLTGRK  384
              NL K  S SL +TRGVI+AL+ +PD + L +RLA+E+A++  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  385  EPnvaanqlavaavDQESNTLDREILNLKTELELRRELANNSPMAIIQRHSARAAGSRGI  444
            EPN A +  A+A  D+  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  445  YEGDPEPNRLDQLQRPNPGGT  465
                    RL +L+  +PG++
Sbjct  455  ESQTNADTRLSELETRKPGDS  475

49) SARI_03143 in NC_010067


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  278 bits (1042),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 190/449 (43%), Positives = 316/449 (71%), Gaps = 13/449 (2%)

Query  16   AADKYQYQQQGAISDWMYYRIGGGAAIPPSATR--RNTFPLTAGVSWNSDMMCGNFDIDT  73
            ++D Y    +GA+SD ++Y IGGG+ I+ ++T    + + L AG+S  SD+MCGNFDI T
Sbjct  32   SGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLS--SDLMCGNFDIKT  89

Query  74   TVRNQLNGVTDGFQQLMGEVIESATSAVASLPAMVIQRANPQLYDLLTNGVLQGRLDFDK  133
            TV NQLNGVT+GF++LMG+VI +AT+AV+S+PAM++QRANP LY+++TNGVLQ+ L FDK
Sbjct  90   TVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDK  149

Query  134  SLLSCQKMAGKMTDYALG--PAWTQSAQAENY-QGIAASEKDAVRADQRaaeeaaeKGKR  190
            S L+C+ MA K++DY+LG  ++WT+SA  E+Y ++++AS  DA+RA++  +  ++  G  
Sbjct  150  SKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGAT  209

Query  191  WVGGEHRGGKGQPPIKLVRDTTVAGYNILNNRsatstssvssNDCQGELCQVWSKPDDAA  250
            WVGG   GGKGQP+I+  RD + AGYN++NN S TS S+VS+  C+G  CQ   ++++AA
Sbjct  210  WVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAA  269

Query  251  QWLTRVVGEQTINVAPDNDQSGDTS---QQSGAQSGVGLTPLIQE-EQDKIQPLIIDMVN  306
              + +V+G+++I    D  + G  +    Q+ + +G G++P++++  +++++ L + +VN
Sbjct  270  AAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQL-VKLVN  328

Query  307  RSQPVNDDTLAQASGGELHLTRGVIEALRDDPDAAVLIQRLSGELALSRVMEQALMARRT  366
             +++  +  L +  +G L +TRGVI+AL+ DPDA+ L+QRL+GELA+S  +E +L  RR 
Sbjct  329  GTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRM  388

Query  367  LLAGMREPNISGekeaqtaltqttaqldqelSQLKLELDMRQALADNAALTILERQTMRA  426
            L +G  EPN +++ +A +   +    LD+EL+ LKLE+++R+ +A N+AL ++ R+  R+
Sbjct  389  LTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRS  448

Query  427  KTKGRAVGVEDDADKRVADLSKPTGGDTQ  455
             T+ +  + + +AD R+++L     GD+Q
Sbjct  449  VTNPQKES-QTNADTRLSELETRKPGDSQ  476

50) Bpet1503 in NC_010170


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  277 bits (1038),  Expect = 8e-76, Method: Compositional matrix adjust.
 Identities = 179/442 (41%), Positives = 295/442 (67%), Gaps = 15/442 (3%)

Query  39   GY-QTGGSVIGDDVMYSIGGGSAVSM-GRAAGMQSIGVGVGWNSNLVCGDMSLQTTLRNQ  96
            GY ++  + ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  ++TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  97   LNGITNGFQQIMGNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  156
            LNG+TNGF+++MG+VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  157  RAMAEKMAD-TAGGQLGWSRMAEGLALRDAVSST--DAVSAIEQAETRRGNDGVPWVGGS  213
             +MA+K+AD T G++ +W+  A     ++AVS++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  214  NAGGSGQPAIKVVGDVTRAGYNLVNGRGVTDTSSIAPTSCSSLSCQTWTSPQAAVEWATR  273
            +AGG GQPAI+   D+++AGYN++N  +VT  S++++ SC + +CQ   +++ A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  274  VLGEKEQRTCDA---C-------TKTETTPGVGLTPLIQEEYDAKLQALQDLVSKAKNTT  323
            VLG++  RTC     C       ++  T +G G++P++++    +L+ L  LV+ +   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  324  PENLREAGSASLPITRGVIEALRDEPDQHLLSQRLASEVALSSVLEKALLLQRTLLTGKK  383
              NL    S+SL +TRGVI+AL+ +PD   L QRLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  384  EPNVAANELAVESVNKESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  443
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  444  YEGDPIPDRLDRLQKGNPGGNP  465
                    RL  L+  +PG++ 
Sbjct  455  ESQTNADTRLSELETRKPGDSQ  476

51) Bxe_A1179 in NC_007951


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  277 bits (1038),  Expect = 8e-76, Method: Compositional matrix adjust.
 Identities = 179/442 (41%), Positives = 295/442 (67%), Gaps = 15/442 (3%)

Query  39   GY-QTGGSVIGDDVMYSIGGGSAVSM-GRAAGMQSIGVGVGWNSNLVCGDMSLQTTLRNQ  96
            GY ++  + ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  ++TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  97   LNGITNGFQQIMGNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  156
            LNG+TNGF+++MG+VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  157  RAMAEKMAD-TAGGQLGWSRMAEGLALRDAVSST--DAVSAIEQAETRRGNDGVPWVGGS  213
             +MA+K+AD T G++ +W+  A     ++AVS++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  214  NAGGSGQPAIKVVGDVTRAGYNLVNGRGVTDTSSIAPTSCSSLSCQTWTSPQAAVEWATR  273
            +AGG GQPAI+   D+++AGYN++N  +VT  S++++ SC + +CQ   +++ A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  274  VLGEKEQRTCDA---C-------TKTETTPGVGLTPLIQEEYDAKLQALQDLVSKAKNTT  323
            VLG++  RTC     C       ++  T +G G++P++++    +L+ L  LV+ +   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  324  PENLREAGSASLPITRGVIEALRDEPDQHLLSQRLASEVALSSVLEKALLLQRTLLTGKK  383
              NL    S+SL +TRGVI+AL+ +PD   L QRLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  384  EPNVAANELAVESVNKESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  443
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  444  YEGDPIPDRLDRLQKGNPGGNP  465
                    RL  L+  +PG++ 
Sbjct  455  ESQTNADTRLSELETRKPGDSQ  476

52) xccb100_2458 in NC_010688


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  276 bits (1033),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 181/440 (42%), Positives = 301/440 (69%), Gaps = 15/440 (3%)

Query  37   NGF-QASGPVIGDEVMYSIGGGSAVSM-GRAAGMRSIGVGAGWNSNLICGDMNIQTTLKN  94
            +G+ ++    ++D + YSIGGGS +S  G   GM+ IG++AG +S+L+CG+ +I+TT+ N
Sbjct  34   DGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGN  93

Query  95   QLNGVTNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLT  154
            QLNGVTNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL 
Sbjct  94   QLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLN  153

Query  155  CRAMAEKMAE-TAGGQLGWSQMAQGMALRDAVSST--DAVSAIEQAETKRGNDGVPWVGG  211
            C +MA+K+A+ T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG
Sbjct  154  CESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGG  213

Query  212  SNAGGAGQPAIRVVGDVTRAGYNLVNGRSVTDTSSIAQASCASLSCQTWTSPQQAVEWAT  271
             +AGG GQPAI+   D+++AGYN++N  SVT  S+++ +SC + +CQ   ++++A     
Sbjct  214  KKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVV  273

Query  272  RVLGEKEQRTCDA---C-------TKTETVPGVGLTPLIQEEYEAKLEALQELISGTRNT  321
            +VLG++  RTC     C       ++  T++G G++P++++    +LE L  L++GT   
Sbjct  274  KVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAP  333

Query  322  TFENLRVAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGK  381
            T  NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+
Sbjct  334  TQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQ  393

Query  382  KepnvaanelaveavnHESDTLDREIQNLKTELELRRELANNSPMAIIQRHGTRAAGSRG  441
             EPN A +  A+   ++  ++LDRE+++LK E+ELRRE+A+N+++ ++ R+  R+  +  
Sbjct  394  SEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQ  453

Query  442  IYEGDPVPDRLDQLQKGNPG  461
                     RL +L+  +PG
Sbjct  454  KESQTNADTRLSELETRKPG  473

53) Bpet1376 in NC_010170


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  276 bits (1034),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 179/445 (41%), Positives = 297/445 (67%), Gaps = 16/445 (3%)

Query  37   NEYGLQHRGSVIGDDVLYSIGGGRAVSMTGAA-NMRSIGVGVGWNSNLICGDMSLTTTLQ  95
            + YG    G+V +D ++YSIGGG  +S  G+   M+ IG++ G +S+L+CG+  + TT+ 
Sbjct  34   DGYGKSVNGAV-SDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVG  92

Query  96   NQLNGITNGFQTIMSNVIQNATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKL  155
            NQLNG+TNGF+ +M++VI  AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL
Sbjct  93   NQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKL  152

Query  156  TCRAIANRMAD-TAGGQLGWDQLAEGMALKKAVAST--DAVSAIEEAESSKGNEGVPWVG  212
             C ++AN++AD T G++ +W + A     K AV+++  DA+ A E    + G+EG  WVG
Sbjct  153  NCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVG  212

Query  213  GDNAGGSGQAPIRVVADVTRAGYNLVNGRSVDDTSSIDSGSCGDRLTCQTWSSPQAAVTW  272
            G +AGG GQ++I+   D+++AGYN++N  SV   S++ +GSC +  +CQ   +++ A + 
Sbjct  213  GKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGS-ACQKFKNSEEAAAA  271

Query  273  ATRVLGEQEQRTCES---C-------TKTQTTPGVGLTPLIQEEYETKLESLQELISGSQ  322
              +VLG++  RTC     C       ++  T +G G++P++++    +LE L  L++G++
Sbjct  272  VVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTE  331

Query  323  SMSFDNLQKASSTSLPITRGVIEALRDEPDQDILARRLASEVALASVLEKALLLQRTLLT  382
            + +  NL+K  S SL +TRGVI+AL+ +PD + L +RLA+E+A++  +E +L ++R L T
Sbjct  332  APTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTT  391

Query  383  GRMEPNVAANEMAQEAVTQESDILDREINNLKTELELRRELANNSPMQIIQRHSTRAAGS  442
            G+ EPN A +  A     +  + LDRE+N+LK E+ELRRE+A+N+++ ++ R+  R+  +
Sbjct  392  GQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTN  451

Query  443  RGVYQGDPIPNRLDELQRSQPGGSN  467
                       RL EL+  +PG+S+
Sbjct  452  PQKESQTNADTRLSELETRKPGDSQ  476

54) XC_2026 in NC_007086


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  275 bits (1029),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 180/440 (41%), Positives = 300/440 (69%), Gaps = 15/440 (3%)

Query  37   NGF-QASGPVIGDEVMYSIGGGSAVSM-GRAAGMRSIGVGAGWNSNLICGDMNIQTTLKN  94
            +G+ ++    ++D + YSIGGGS +S  G   GM+ IG++AG +S+L+CG+ +I+TT+ N
Sbjct  34   DGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGN  93

Query  95   QLNGVTNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLT  154
            QLNGVTNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL 
Sbjct  94   QLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLN  153

Query  155  CRAMAEKMAE-TAGGQLGWSQMAQGMALRDAVSST--DAVSAIEQAETKRGNDGVPWVGG  211
            C +MA+K+A+ T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG
Sbjct  154  CESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGG  213

Query  212  SNAGGAGQPAIRVVGDVTRAGYNLVNGRSVTDTSSIAQASCASLSCQTWTSPQQAVEWAT  271
             +AGG GQPAI+   D+++AGYN++N  SVT  S+++ +SC + +CQ   ++++A     
Sbjct  214  KKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVV  273

Query  272  RVLGEKEQRICDA---C-------TKTETVPGVGLTPLIQEEYEAKLEALQELISGTRNT  321
            +VLG++  R C     C       ++  T++G G++P++++    +LE L  L++GT   
Sbjct  274  KVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAP  333

Query  322  TFENLRVAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGK  381
            T  NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+
Sbjct  334  TQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQ  393

Query  382  KepnvaanelaveavnHESDTLDREIQNLKTELELRRELANNSPMAIIQRHGTRAAGSRG  441
             EPN A +  A+   ++  ++LDRE+++LK E+ELRRE+A+N+++ ++ R+  R+  +  
Sbjct  394  SEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQ  453

Query  442  IYEGDPVPDRLDQLQKGNPG  461
                     RL +L+  +PG
Sbjct  454  KESQTNADTRLSELETRKPG  473

55) Alide_4032 in NC_014910


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  273 bits (1023),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 178/441 (41%), Positives = 301/441 (69%), Gaps = 15/441 (3%)

Query  38   GF-QTSGPVIGDEVMYSIGGGSAVSM-GRAAGMRSIGVGLGWNSNLICGDMSIQTTLRNQ  95
            G+ ++    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRSVTDTSSIAPASCASLSCQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  SVT  S+++++SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  VLGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYETKLEALQELVSGTRNTT  322
            VLG++  RTC     C       ++  T++G G++P++++    +LE L  LV+GT   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLHAAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL+   S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  EPNVAANQLAVEAVNHESDTLDQEIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LD+E+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDRLQRGNPGGT  463
                    RL  L+  +PG++
Sbjct  455  ESQTNADTRLSELETRKPGDS  475

56) NH44784_010371 in NC_021285


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  271 bits (1014),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 176/439 (41%), Positives = 295/439 (68%), Gaps = 15/439 (3%)

Query  19   GY-QTGGSVIGDDVMYSIGGGNAVSM-GRAAGMRSLGVGVGWNSNLICGDMSIQTTLKNQ  76
            GY ++  + ++D + YSIGGG+ +S  G   GM+ +G++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  77   LNGVTNGFQQIMSSVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  136
            LNGVTNGF+++M+ VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  137  RAMAERMAE-TAGGQLGWSQMAEGLALRDAVSST--DAVSAVEQAETRRGNDGVPWVGGS  193
             +MA+++A+ T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  194  NAGGSGQPAIKVVGDVTRAGYNLVNGRGVTDTSSIAPTSCSSLSCQTWTSPQAAVEWATR  253
            +AGG GQPAI+   D+++AGYN++N  +VT  S++++ SC + +CQ   +++ A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  254  VLGEKEQRTCD---AC-------TKTETTPGVGLTPLIQEEYDAKLQALQDLVSKAKNTT  303
            VLG++  RTC     C       ++  T +G G++P++++    +L+ L  LV+ +   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  304  PENLREAGSASLPITRGVIEALRDEPDQHLLSQRLASEVALSSVLEKALLLQRTLLTGKK  363
              NL    S+SL +TRGVI+AL+ +PD   L QRLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  364  epnvaanelaveavnKESDTLDREIQNLKTELELRRELANNSPMAIIQRHSTRASGSRGI  423
            EPN A +  A+   ++  ++LDRE+++LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  424  YEGDPVPDRLDQLQKGNPG  442
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

57) PSTAB_2491 in NC_015740


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  271 bits (1014),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 177/436 (41%), Positives = 293/436 (68%), Gaps = 18/436 (4%)

Query  23   SVIGDDVLYSIGGGQAVSMTPAP--NMRSIGVGVGWNSNLICGDMSISTTIQNQLNGVTN  80
            + ++D ++YSIGGG  +S TP+    M+ IG++ G +S+L+CG+  I TT+ NQLNGVTN
Sbjct  42   GAVSDKLFYSIGGGSVIS-TPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTN  100

Query  81   GFQTIMSSVIQNATAAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAEK  140
            GF+ +M+ VI  AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C +MA+K
Sbjct  101  GFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANK  160

Query  141  MGDMA-GGQIGWSQLADGMVLKQAVSST--DAVSAIEQTEASRGNEGVAWVGGENAGGTG  197
            ++D + G++ +W++ A     K+AVS++  DA+ A E    + G+EG +WVGG +AGG G
Sbjct  161  LADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKG  220

Query  198  QRPIRVVSDVTRAGYNLVNGRDVDDTSSIDPSSCGGNLTCQTWNSPAAASAWAVRVLGEQ  257
            Q +I+   D+++AGYN++N   V   S++ ++SC G+ +CQ  +++  A+A  V+VLG++
Sbjct  221  QPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGS-ACQKFKNSEEAAAAVVKVLGDR  279

Query  258  EQRTCEA---C-------TKTMATPGVGLTPLIQEEYEERLEVLQGLIAGSQPLSFDNLQ  307
              RTC     C       ++  + +G G++P++++   E LE L  L+ G+++ +  NL+
Sbjct  280  SIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLD  339

Query  308  TAGSASLPITRGVVEALRDEPDQDILARRLASEIALSSVLEKALLLQRTLLTGRKEPNVA  367
               S+SL +TRGV++AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ EPN A
Sbjct  340  KIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAA  399

Query  368  ANELAQKAVSHESDLLDREIHNLKTELELRRELASNSPTAIIQRHSARSAGSRGIYQGDP  427
             +  A     +  + LDRE+++LK E+ELRRE+A N++  ++ R+  RS  +        
Sbjct  400  DQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTN  459

Query  428  ARDRLDQLQ-RPPSSG  442
            A  RL +L+ R P+ +
Sbjct  460  ADTRLSELETRKPGDS  475

58) Ajs_1393 in NC_008782


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  269 bits (1004),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 177/439 (41%), Positives = 295/439 (68%), Gaps = 15/439 (3%)

Query  39   GY-QTSGSVIGDDVMYSIGGGSAVSM-GRAAGMRSLGVGVGWNSNLICGDMSIQTTLKNQ  96
            GY ++  + ++D + YSIGGGS +S  G   GM+ +G++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  97   LNGITNGFQQIMSSVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  156
            LNG+TNGF+++M+ VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  157  RAMAEKMAD-TAGGQLGWSQMAEGLALRDAVSST--DAVSAIEQAETRRGNDGVPWIGGS  213
             +MA+K+AD T G++ +W++ A     ++AVS++  DA+ A E      G++G  W+GG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  214  NAGGSGQPAIKVVGDVTRAGYNLVNGRGVTDTssiapsscsslsCQTWASPQAAVEWATR  273
            +AGG GQPAI+   D+++AGYN++N  +VT  S+++++SC + +CQ   +++ A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  274  VLGEKEQRTCDA---C-------TKTETTPGVGLTPLIQEEYDAKLQALQGLVSKAKNTT  323
            VLG++  RTC     C       ++  T +G G++P++++    +L+ L  LV+ +   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  324  PENLREAGSASLPITRGVIEALRDEPDQHLLSQRLASEVALSSVLEKALLLQRTLLTGKK  383
              NL    S+SL +TRGVI+AL+ +PD   L QRLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  384  EPNVAANELAVDAVNKESDTLDREIRNLKTELELRRELANNSPMAIIQRHGARATGSRGI  443
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  444  YEGDPVPDRLDQLQKGNPG  462
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

59) XCV2362 in NC_007508


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  269 bits (1004),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 177/439 (41%), Positives = 295/439 (68%), Gaps = 15/439 (3%)

Query  39   GY-QTSGSVIGDDVMYSIGGGSAVSM-GRAAGMRSLGVGVGWNSNLICGDMSIQTTLKNQ  96
            GY ++  + ++D + YSIGGGS +S  G   GM+ +G++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  97   LNGITNGFQQIMSSVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  156
            LNG+TNGF+++M+ VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  157  RAMAEKMAD-TAGGQLGWSQMAEGLALRDAVSST--DAVSAIEQAETRRGNDGVPWIGGS  213
             +MA+K+AD T G++ +W++ A     ++AVS++  DA+ A E      G++G  W+GG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  214  NAGGSGQPAIKVVGDVTRAGYNLVNGRGVTDTssiapsscsslsCQTWASPQAAVEWATR  273
            +AGG GQPAI+   D+++AGYN++N  +VT  S+++++SC + +CQ   +++ A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  274  VLGEKEQRTCDA---C-------TKTETTPGVGLTPLIQEEYDAKLQALQGLVSKAKNTT  323
            VLG++  RTC     C       ++  T +G G++P++++    +L+ L  LV+ +   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  324  PENLREAGSASLPITRGVIEALRDEPDQHLLSQRLASEVALSSVLEKALLLQRTLLTGKK  383
              NL    S+SL +TRGVI+AL+ +PD   L QRLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  384  EPNVAANELAVDAVNKESDTLDREIRNLKTELELRRELANNSPMAIIQRHGARATGSRGI  443
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  444  YEGDPVPDRLDQLQKGNPG  462
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

60) ST548_p5017 in NC_020181


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  268 bits (1001),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 175/409 (43%), Positives = 290/409 (71%), Gaps = 11/409 (2%)

Query  20   LTAGISWNSDMMCGNFDIDTTVRNQLNGVTDGFQQLMGEVIESATSAVASLPAMVIQRAN  79
            L AG+S  SD+MCGNFDI TTV NQLNGVT+GF++LMG+VI +AT+AV+S+PAM++QRAN
Sbjct  72   LDAGLS--SDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRAN  129

Query  80   PQLYDLLTNGVLQGRLDFDKSLLSCQKMAGKMTDYALG--PAWTQSAQAENY-QGIAASE  136
            P LY+++TNGVLQ+ L FDKS L+C+ MA K++DY+LG  ++WT+SA  E+Y ++++AS 
Sbjct  130  PGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASG  189

Query  137  KDAVRADQRaaeeaaeKGKRWVGGEHRGGKGQSPIKLVRDTTVAGYNILNNRNATSTSSV  196
             DA+RA++  +  ++  G  WVGG   GGKGQ++I+  RD + AGYN++NN + TS S+V
Sbjct  190  GDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTV  249

Query  197  SSNDCQGELCQVWSKPDDAAQWLTRVVGEQTINVAPDNDQSGDT---DQQSGAQSGVGLT  253
            S+  C+G  CQ   ++++AA  + +V+G+++I    D  + G     + Q+ + +G G++
Sbjct  250  SAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFA  309

Query  254  PLIQE-EQDKIQPLIIDMVNRSQPINDDTLAQASGGELHLTRGVIEALRDDPDAAVLIQR  312
            P++++  +++++ L + +VN +++  +  L +  +G L +TRGVI+AL+ DPDA+ L+QR
Sbjct  310  PMLEDTTKENLEQL-VKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQR  368

Query  313  LSGELALSRVMEQALMARRTLLAGMREPNVSGekeaqtaltqttaqldqelSQLKLELDM  372
            L+GELA+S  +E +L  RR L +G  EPN +++ +A +   +    LD+EL+ LKLE+++
Sbjct  369  LAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMEL  428

Query  373  RQALADNAALTILERQTMRAKTKGQAVGVEDDTDKRVDDLSKPTGGDTQ  421
            R+ +A N+AL ++ R+  R+ T+ Q  + + ++D R+ +L     GD+Q
Sbjct  429  RREVAKNTALVVVAREENRSVTNPQKES-QTNADTRLSELETRKPGDSQ  476

61) A79E_4493 in NC_018522


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  266 bits (995),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 174/406 (43%), Positives = 283/406 (70%), Gaps = 9/406 (2%)

Query  36   AADDYSFRTRGAVDDLLYYQIGGGEAVMpppvrrspsplsvGIGWNADMMCGNFDIGTTV  95
            ++D+Y+    GAV D L+Y IGGG  +  P    +   ++++ G ++D+MCGNFDI TTV
Sbjct  32   SGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTV  91

Query  96   RNQLNGITDGFQQLMGNVIQSATGAVASLPAMIIQRANPQLYDLLTNGVLQGRLDFDKSL  155
             NQLNG+T+GF++LMG+VI +ATGAV+S+PAMI+QRANP LY+++TNGVLQ+ L FDKS 
Sbjct  92   GNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSK  151

Query  156  LNCQKMAEKMTD--LAADSAWFSGAKAENY-QTLAASDSDAIRTDQkaakeaaekgkRWV  212
            LNC+ MA+K++D  L+  S+W  +A  E+Y ++++AS++DA+R+++  +K ++  G  WV
Sbjct  152  LNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWV  211

Query  213  GGEKRGGKGQPPIKVVHDATAAGWNILNQQPATSTTSLTSSECDGELCSTWKSPEEAAGW  272
            GG K GGKGQP+I+  +D + AG N++N+ + TS ++++++ C G  C   K++EEAA+ 
Sbjct  212  GGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAA  271

Query  273  MTRVVGEQTISVAQATDD------PDARSGAQAGIGLHPLIDEEKAKILLVLTALVNGNQ  326
            + +V+G+++I   + + +       +A++ + AG G+ P++++     L  L  LVNG +
Sbjct  272  VVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTE  331

Query  327  KPGFDNLAKASGGSMQLTRGVVEALRDDPDAAVLTERLAGELALARVTEQALLARRTLLA  386
             P   NL K  +GS+++TRGV++AL+ DPDA+ L +RLAGELA++   E +L  RR L +
Sbjct  332  APTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTT  391

Query  387  GMREPNIANVKEAQESLGKTTIQLDEELSQLKLELDFRQALTRNTA  432
            G  EPN A+  +A    ++    LD EL+ LKLE+++R+ +++NTA
Sbjct  392  GQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTA  437

62) KP1_0594 in NC_012731


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  266 bits (995),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 174/406 (43%), Positives = 283/406 (70%), Gaps = 9/406 (2%)

Query  41   AADDYSFRTRGAVDDLLYYQIGGGEAVMpppvrrspsplsvGIGWNADMMCGNFDIGTTV  100
            ++D+Y+    GAV D L+Y IGGG  +  P    +   ++++ G ++D+MCGNFDI TTV
Sbjct  32   SGDGYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTV  91

Query  101  RNQLNGITDGFQQLMGNVIQSATGAVASLPAMIIQRANPQLYDLLTNGVLQGRLDFDKSL  160
             NQLNG+T+GF++LMG+VI +ATGAV+S+PAMI+QRANP LY+++TNGVLQ+ L FDKS 
Sbjct  92   GNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSK  151

Query  161  LNCQKMAEKMTD--LAADSAWFSGAKAENY-QTLAASDSDAIRTDQkaakeaaekgkRWV  217
            LNC+ MA+K++D  L+  S+W  +A  E+Y ++++AS++DA+R+++  +K ++  G  WV
Sbjct  152  LNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWV  211

Query  218  GGEKRGGKGQPPIKVVHDATAAGWNILNQQPATSTTSLTSSECDGELCSTWKSPEEAAGW  277
            GG K GGKGQP+I+  +D + AG N++N+ + TS ++++++ C G  C   K++EEAA+ 
Sbjct  212  GGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAA  271

Query  278  MTRVVGEQTISVAQATDD------PDARSGAQAGIGLHPLIDEEKAKILLVLTALVNGNQ  331
            + +V+G+++I   + + +       +A++ + AG G+ P++++     L  L  LVNG +
Sbjct  272  VVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTE  331

Query  332  KPGFDNLAKASGGSMQLTRGVVEALRDDPDAAVLTERLAGELALARVTEQALLARRTLLA  391
             P   NL K  +GS+++TRGV++AL+ DPDA+ L +RLAGELA++   E +L  RR L +
Sbjct  332  APTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTT  391

Query  392  GMREPNIANVKEAQESLGKTTIQLDEELSQLKLELDFRQALTRNTA  437
            G  EPN A+  +A    ++    LD EL+ LKLE+++R+ +++NTA
Sbjct  392  GQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTA  437

63) HEAR2025 in NC_009138


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 173/425 (41%), Positives = 286/425 (68%), Gaps = 14/425 (3%)

Query  1    MYSIGGGNAVSM-GRAAGMRSLGVGVGWNSNLICGDMSIQTTLKNQLNGVTNGFQQIMSS  59
             YSIGGG+ +S  G   GM+ +G++ G +S+L+CG+  I+TT+ NQLNGVTNGF+++M+ 
Sbjct  49   FYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGD  108

Query  60   VIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAERMAE-TAGG  118
            VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C +MA+++A+ T G+
Sbjct  109  VITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGD  168

Query  119  QLGWSQMAEGLALRDAVSST--DAVSAVEQAETRRGNDGVPWVGGSNAGGSGQPAIKVVG  176
            + +W++ A     ++AVS++  DA+ A E      G++G  WVGG +AGG GQPAI+   
Sbjct  169  KSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTR  228

Query  177  DVTRAGYNLVNGRGVTDTSSIAPTSCSSLSCQTWTSPQAAVEWATRVLGEKEQRTCD---  233
            D+++AGYN++N  +VT  S++++ SC + +CQ   +++ A     +VLG++  RTC    
Sbjct  229  DLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDAT  288

Query  234  AC-------TKTETTPGVGLTPLIQEEYDAKLQALQDLVSKAKNTTPENLREAGSASLPI  286
             C       ++  T +G G++P++++    +L+ L  LV+ +   T  NL    S+SL +
Sbjct  289  ECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKV  348

Query  287  TRGVIEALRDEPDQHLLSQRLASEVALSSVLEKALLLQRTLLTGKKepnvaanelaveav  346
            TRGVI+AL+ +PD   L QRLA+E+A+S  +E +L ++R L TG+ EPN A +  A+   
Sbjct  349  TRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEA  408

Query  347  nKESDTLDREIQNLKTELELRRELANNSPMAIIQRHSTRASGSRGIYEGDPVPDRLDQLQ  406
            ++  ++LDRE+++LK E+ELRRE+A+N+++ ++ R+  R+  +           RL +L+
Sbjct  409  DRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTRLSELE  468

Query  407  KGNPG  411
              +PG
Sbjct  469  TRKPG  473

64) Rmet_2358 in NC_007973


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  258 bits (964),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 179/439 (41%), Positives = 300/439 (69%), Gaps = 15/439 (3%)

Query  38   GYQNS-GPVIGDDVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQ  95
            GY +S    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVGSN--DAVSAVEQAETRRGNDGVPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AV+++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRGVTDTssiasascaslscQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  +VT  S+++++SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  VLGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYEAKLEVLQELVSGTRTTT  322
            VLG++  RTC     C       ++  T++G G++P++++    +LE L  LV+GT + T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  EPNVAANELAVKAVNHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDQLQKGNPG  461
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

65) Bpet4260 in NC_010170


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  257 bits (959),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 179/434 (42%), Positives = 298/434 (69%), Gaps = 14/434 (3%)

Query  48   SVIGDEVMYSIGGGSAVSM-GRVAGMRSIGVGVGWNSNLICGDMSIQTTLRNQLNGVTNG  106
            + ++D + YSIGGGS +S  G + GM+ IG++ G +S+L+CG+  I+TT+ NQLNGVTNG
Sbjct  42   GAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNG  101

Query  107  FQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAEKM  166
            F+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C +MA+K+
Sbjct  102  FKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKL  161

Query  167  AD-TAGGQLGWSQMAEGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVggsnaggagq  223
            AD T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG +AGG GQ
Sbjct  162  ADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQ  221

Query  224  saIRVVGDVTRAGYNLVNGRSVTDTssiaaascaslscQTWTSPQQATEWATRVLGEQVQ  283
            +AI+   D+++AGYN++N  SVT  S+++A+SC + +CQ   ++++A+    +VLG++  
Sbjct  222  PAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSI  281

Query  284  RTCDA---C-------TKTETVPGVGLTPLIQEEYEAKLEALQELVSGTRNTTFENLRAA  333
            RTC     C       ++  T++G G++P++++    +LE L  LV+GT   T  NL   
Sbjct  282  RTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKI  341

Query  334  GSTSLPITRGVIEALRDEPDQDLLARRLASEVALASVLEKALLLQRTLLTGKKEPNVAAN  393
             S SL +TRGVI+AL+ +PD + L +RLA+E+A++  +E +L ++R L TG+ EPN A +
Sbjct  342  KSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQ  401

Query  394  QLAVEAVNHESDTLDQEIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGIYEGDPIP  453
              A+   ++  ++LD+E+ +LK E+ELRRE+A+N+++ ++ R+  R+  +          
Sbjct  402  PQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNAD  461

Query  454  DRLDRLQKGNPGGN  467
             RL  L+  +PG++
Sbjct  462  TRLSELETRKPGDS  475

66) Daci_4184 in NC_010002


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  257 bits (959),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 179/434 (42%), Positives = 298/434 (69%), Gaps = 14/434 (3%)

Query  48   SVIGDEVMYSIGGGSAVSM-GRVAGMRSIGVGVGWNSNLICGDMSIQTTLRNQLNGVTNG  106
            + ++D + YSIGGGS +S  G + GM+ IG++ G +S+L+CG+  I+TT+ NQLNGVTNG
Sbjct  42   GAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNG  101

Query  107  FQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAEKM  166
            F+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C +MA+K+
Sbjct  102  FKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKL  161

Query  167  AD-TAGGQLGWSQMAEGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVggsnaggagq  223
            AD T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG +AGG GQ
Sbjct  162  ADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQ  221

Query  224  saIRVVGDVTRAGYNLVNGRSVTDTssiaaascaslscQTWTSPQQATEWATRVLGEQVQ  283
            +AI+   D+++AGYN++N  SVT  S+++A+SC + +CQ   ++++A+    +VLG++  
Sbjct  222  PAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSI  281

Query  284  RTCDA---C-------TKTETVPGVGLTPLIQEEYEAKLEALQELVSGTRNTTFENLRAA  333
            RTC     C       ++  T++G G++P++++    +LE L  LV+GT   T  NL   
Sbjct  282  RTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKI  341

Query  334  GSTSLPITRGVIEALRDEPDQDLLARRLASEVALASVLEKALLLQRTLLTGKKEPNVAAN  393
             S SL +TRGVI+AL+ +PD + L +RLA+E+A++  +E +L ++R L TG+ EPN A +
Sbjct  342  KSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQ  401

Query  394  QLAVEAVNHESDTLDQEIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGIYEGDPIP  453
              A+   ++  ++LD+E+ +LK E+ELRRE+A+N+++ ++ R+  R+  +          
Sbjct  402  PQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNAD  461

Query  454  DRLDRLQKGNPGGN  467
             RL  L+  +PG++
Sbjct  462  TRLSELETRKPGDS  475

67) Dd1591_0430 in NC_012912


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  256 bits (955),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 163/404 (41%), Positives = 274/404 (68%), Gaps = 13/404 (3%)

Query  75   VGVGWNSNLICGDMNISTTIQNQLNGLTNGFQNIMSSVIQNATSAVASLPALIIQRADPG  134
            ++ G +S+L+CG+ +I TT+ NQLNG+TNGF+++M+ VI  AT+AV+S+PA+I+QRA+PG
Sbjct  72   LDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPG  131

Query  135  LYNLLTNGILQARLDFDRSKLTCRAMAERMAD-TAGGQLGWSQIAEGMALRQAVSST--D  191
            LY+++TNG+LQA L FD+SKL C +MA+++AD T G++ +W++ A     ++AVS++  D
Sbjct  132  LYEMITNGVLQAGLAFDKSKLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGD  191

Query  192  AVSAIEQAEKNRGNDGVPWVGGDNAGGVGQHSIKVIGDVTRAGYNLVNGRNVADTSSIDT  251
            A+ A E   K  G++G  WVGG +AGG GQ +I+   D+++AGYN++N  +V+  S++ +
Sbjct  192  ALRAEEARTKASGKEGATWVGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSA  251

Query  252  ASCQSLSCQTWASPQQAIDFATRVLGEQEQRTCEG---C-------IRTETVPGVGLTPV  301
            +SC++ +CQ   ++++A     +VLG++  RTC +   C        +  T++G G++P+
Sbjct  252  GSCKGSACQKFKNSEEAAAAVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPM  311

Query  302  IQEEYDTKLKVLQELVRGTRNTTFENLHDAGSTSLPITRGVIEALRDEPDQDILARRLAS  361
            +++    +L  L  LV GT   T  NL+   S SL +TRGVI+AL+ +PD + L +RLA+
Sbjct  312  LEDTTKENLEQLVKLVNGTEAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAG  371

Query  362  EVALASVLEKALLLQRTLLTGQKEPnvaanrlavaavTQESNTLDREILNLKTELELRRE  421
            E+A++  +E +L ++R L TGQ EPN A +  A+A   +  ++LDRE+ +LK E+ELRRE
Sbjct  372  ELAMSDTIETGLAMRRMLTTGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRRE  431

Query  422  LASNSPMAIIQRHSVRSAGSRGIYEGDPVPNRLDQLQRRNPGGT  465
            +A N+++ ++ R+  RS  +           RL +L+ R+PG++
Sbjct  432  VAKNTALVVVAREENRSVTNPQKESQTNADTRLSELETRKPGDS  475

68) NCGM2_1406 in NC_017549


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 179/434 (42%), Positives = 297/434 (69%), Gaps = 14/434 (3%)

Query  48   SVIGDEVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQLNGVTNG  106
            + ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQLNGVTNG
Sbjct  42   GAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNG  101

Query  107  FQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAEKM  166
            F+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C +MA+K+
Sbjct  102  FKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKL  161

Query  167  AD-TAGGQLGWSQMAEGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVggsnaggagq  223
            AD T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG +AGG GQ
Sbjct  162  ADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQ  221

Query  224  saIRVVGDVTRAGYNLVNGRSVTDTssiaaascaslscQTWTSPQQATEWATRVLGEQVQ  283
            +AI+   D+++AGYN++N  SVT  S+++A+SC + +CQ   ++++A+    +VLG++  
Sbjct  222  PAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSI  281

Query  284  RTCDA---C-------TKTETVPGVGLTPLIQEEYEAKLEALQELVSGTRNTTFENLRAA  333
            RTC     C       ++  T++G G++P++++    +LE L  LV+GT   T  NL   
Sbjct  282  RTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKI  341

Query  334  GSTSLPITRGVIEALRDEPDQDLLARRLASEVALASVLEKALLLQRTLLTGKKEPNVAAN  393
             S SL +TRGVI+AL+ +PD + L +RLA+E+A++  +E +L ++R L TG+ EPN A +
Sbjct  342  KSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQ  401

Query  394  QLAVEAVNHESDTLDQEIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGIYEGDPIP  453
              A+   ++  ++LD+E+ +LK E+ELRRE+A+N+++ ++ R+  R+  +          
Sbjct  402  PQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNAD  461

Query  454  DRLDRLQKGNPGGN  467
             RL  L+  +PG++
Sbjct  462  TRLSELETRKPGDS  475

69) PSTAA_1244 in NC_017532


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  255 bits (954),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 178/434 (42%), Positives = 297/434 (69%), Gaps = 14/434 (3%)

Query  48   SVIGDEVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQLNGVTNG  106
            + ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQLNGVTNG
Sbjct  42   GAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNG  101

Query  107  FQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAEKM  166
            F+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C +MA+K+
Sbjct  102  FKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKL  161

Query  167  AD-TAGGQLGWSQMAEGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVggsnsggagq  223
            AD T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG ++GG GQ
Sbjct  162  ADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQ  221

Query  224  saIRVVGDVTRAGYNLVNGRSVTDTssiaaascaslscQTWTSPQQATEWATRVLGEQVQ  283
            +AI+   D+++AGYN++N  SVT  S+++A+SC + +CQ   ++++A+    +VLG++  
Sbjct  222  PAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSI  281

Query  284  RTCDA---C-------TKTETVPGVGLTPLIQEEYEAKLEALQELVSGTRNTTFENLRAA  333
            RTC     C       ++  T++G G++P++++    +LE L  LV+GT   T  NL   
Sbjct  282  RTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKI  341

Query  334  GSTSLPITRGVIEALRDEPDQDLLARRLASEVALASVLEKALLLQRTLLTGKKEPNVAAN  393
             S SL +TRGVI+AL+ +PD + L +RLA+E+A++  +E +L ++R L TG+ EPN A +
Sbjct  342  KSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQ  401

Query  394  QLAVEAVNHESDTLDQEIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGIYEGDPIP  453
              A+   ++  ++LD+E+ +LK E+ELRRE+A+N+++ ++ R+  R+  +          
Sbjct  402  PQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNAD  461

Query  454  DRLDRLQKGNPGGN  467
             RL  L+  +PG++
Sbjct  462  TRLSELETRKPGDS  475

70) AXYL_01111 in NC_014640


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  255 bits (953),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 178/439 (41%), Positives = 297/439 (68%), Gaps = 15/439 (3%)

Query  38   GYQNS-GPVLGDDVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQ  95
            GY +S    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVGSN--DAVSAVEQAETRRGNDGVPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AV+++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRGVTDtssiastscaslscQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  +VT  S++++ SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  ALGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYEAKLEVLQELVSGTRNTT  322
             LG++  RTC     C       ++  T++G G++P++++    +LE L  LV+GT   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  EPNVAANELAVQAVNHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDQLQKGNPG  461
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

71) PLES_26481 in NC_011770


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 176/439 (41%), Positives = 294/439 (67%), Gaps = 15/439 (3%)

Query  39   GY-QTSGSVIGDDVMYSIGGGNAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLKNQ  96
            GY ++  + ++D + YSIGGG+ +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  97   LNGITNGFQQIMSSVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  156
            LNG+TNGF+++M+ VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  157  RAMAEKMAE-TAGGQLGWSQMAEGLALRDAVSST--DAVSAIEQAETRRGNDGVPWVGGS  213
             +MA+K+A+ T G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  214  NAGGSGQPAIKVVGDVTRAGYNLVNGRGVTDTssiapascsslscQTWTSPQAAVEWATR  273
            +AGG GQPAI+   D+++AGYN++N  +VT  S+++++SC + +CQ   +++ A     +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  274  VLGEKEQRTCD---AC-------TKTETTPGVGLTPLIQEEYDAKLQALQDLVTKAKNTT  323
            VLG++  RTC     C       ++  T +G G++P++++    +L+ L  LV  +   T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  324  PENLREAGSASLPITRGVIEALRDEPDQHLLSQRLASEVALASVLEKALLLQRTLLTGKK  383
              NL    S+SL +TRGVI+AL+ +PD   L QRLA+E+A++  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  384  epnvaanelaveavnHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGARAAGSRGI  443
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  444  YEGDPVPDRLDQLQKGNPG  462
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

72) Plav_3429 in NC_009719


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  251 bits (939),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 177/430 (42%), Positives = 293/430 (69%), Gaps = 14/430 (3%)

Query  46   VGDDVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSLQTTLRNQLNGITNGFQ  104
            V+D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  ++TT+ NQLNG+TNGF+
Sbjct  44   VSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQLNGVTNGFK  103

Query  105  QIMGNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRamaekmae  164
            ++MG+VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C +MA+K+A+
Sbjct  104  DLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCESMANKLAD  163

Query  165  -maGGQLGWSQMAEGMALRDAVSST--DAVSAIEQAETRRGNDGVPWVGGSNAGGAGQPA  221
               G++ +W++ A     ++AVS++  DA+ A E      G++G  WVGG +AGG GQPA
Sbjct  164  YTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKKAGGKGQPA  223

Query  222  IRVVGDVTRAGYNLVNGRGVTDTssiasascvslscQTWTSPQQAIEWATRVLGEQEQRT  281
            I+   D+++AGYN++N  +VT  S+++++SC + +CQ   ++++A     +VLG++  RT
Sbjct  224  IQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVKVLGDRSIRT  283

Query  282  CDA---C-------TKTETVPGVGLTPLIQEEYEVKLETLQELISGTRNTTFENLREAGS  331
            C     C       ++  T++G G++P++++    +LE L  L++GT   T  NL    S
Sbjct  284  CKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPTQANLDKIKS  343

Query  332  TSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKKEPNVAANQL  391
             SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ EPN A +  
Sbjct  344  GSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQSEPNAADQPQ  403

Query  392  AVEAVNHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGVYEGDPVPDR  451
            A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +           R
Sbjct  404  AMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQKESQTNADTR  463

Query  452  LDQLQKGNPG  461
            L +L+  +PG
Sbjct  464  LSELETRKPG  473

73) Ajs_1251 in NC_008782


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  245 bits (915),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 178/439 (41%), Positives = 297/439 (68%), Gaps = 15/439 (3%)

Query  38   GYQNS-GPVIGDDVMYSIGGGSAVSM-GRAAGMRSIGVGLGWNSNLICGDMSIQTTLRNQ  95
            GY +S    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVGSN--DAVSAVEQAETRRGNDGVPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AV+++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRGVTDTssialascaslscQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  +VT  S+++ +SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  VLGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYEAKLEVLQELVSGVRNTT  322
            VLG++  RTC     C       ++  T++G G++P++++    +LE L  LV+G    T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  epnvaanelaveavnHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDQLQKGNPG  461
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

74) PADK2_11945 in NC_018080


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  245 bits (914),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 178/439 (41%), Positives = 297/439 (68%), Gaps = 15/439 (3%)

Query  38   GYQNS-GPVLGDDVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQ  95
            GY +S    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVGSN--DAVSAVEQAETRRGNDGVPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AV+++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRGVTDtssiastscaslscQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  +VT  S++++ SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  VLGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYEAKLEVLQELVSGVRNTT  322
            VLG++  RTC     C       ++  T++G G++P++++    +LE L  LV+G    T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  epnvaanelaveavnHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDQLQKGNPG  461
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

75) NH44784_009421 in NC_021285


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  244 bits (910),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 178/439 (41%), Positives = 297/439 (68%), Gaps = 15/439 (3%)

Query  38   GYQNS-GPVLGDDVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQ  95
            GY +S    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVGSN--DAVSAVEQAETRRGNDGLPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AV+++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRGVTDtssiastscaslscQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  +VT  S++++ SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  VLGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYEAKLEVLQELVSGVRNTT  322
            VLG++  RTC     C       ++  T++G G++P++++    +LE L  LV+G    T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  epnvaanelaveavnHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDQLQKGNPG  461
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

76) SMD_1511 in NC_017671


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  244 bits (910),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 178/439 (41%), Positives = 297/439 (68%), Gaps = 15/439 (3%)

Query  38   GYQNS-GPVLGDDVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQ  95
            GY +S    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVGSN--DAVSAVEQAETRRGNDGLPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AV+++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRGVTDtssiastscaslscQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  +VT  S++++ SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  VLGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYEAKLEVLQELVSGVRNTT  322
            VLG++  RTC     C       ++  T++G G++P++++    +LE L  LV+G    T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  epnvaanelaveavnHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDQLQKGNPG  461
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

77) TMO_c0032 in NC_017958


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  244 bits (910),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 178/439 (41%), Positives = 297/439 (68%), Gaps = 15/439 (3%)

Query  38   GYQNS-GPVLGDDVMYSIGGGSAVSM-GRAAGMRSIGVGVGWNSNLICGDMSIQTTLRNQ  95
            GY +S    ++D + YSIGGGS +S  G   GM+ IG++ G +S+L+CG+  I+TT+ NQ
Sbjct  35   GYGKSVNGAVSDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQ  94

Query  96   LNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTC  155
            LNG+TNGF+++M++VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SKL C
Sbjct  95   LNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNC  154

Query  156  RAMAEKMAE-TAGGQLGWSQMAEGMALRDAVGSN--DAVSAVEQAETRRGNDGLPWVggs  212
             +MA+K+A+ T G++ +W++ A     ++AV+++  DA+ A E      G++G  WVGG 
Sbjct  155  ESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGK  214

Query  213  naggagqsaIRVVGDVTRAGYNLVNGRGVTDtssiastscaslscQTWTSPQQATEWATR  272
            +AGG GQ+AI+   D+++AGYN++N  +VT  S++++ SC + +CQ   ++++A+    +
Sbjct  215  KAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAAAVVK  274

Query  273  VLGEQVQRTCDS---C-------TKTETVPGVGLTPLIQEEYEAKLEVLQELVSGVRNTT  322
            VLG++  RTC     C       ++  T++G G++P++++    +LE L  LV+G    T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  323  FENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKK  382
              NL    S SL +TRGVI+AL+ +PD + L +RLA+E+A+S  +E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  383  epnvaanelaveavnHESDTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGI  442
            EPN A +  A+   ++  ++LDRE+ +LK E+ELRRE+A+N+++ ++ R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  443  YEGDPVPDRLDQLQKGNPG  461
                    RL +L+  +PG
Sbjct  455  ESQTNADTRLSELETRKPG  473

78) T1E_4196 in NC_018220


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  220 bits (820),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 277/414 (67%), Gaps = 13/414 (3%)

Query  20   AENGYHLGDQAQVLDDRVMYTIgggsaagapssLYRPNGLGVGMSWRANMMCGNMNLSNT  79
            + +GY  + ++ V  D++ Y+IGGGS  ++P+++Y  + +G++ +  +++MCGN ++  T
Sbjct  32   SGDGYGKSVNGAV-SDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTT  90

Query  80   LQNQLNGATQGFQQIMGNVIQNATQAVMSLPAMIIQRANPGLYELLSNGVLQGRIDFDRS  139
            + NQLNG T+GF+++MG+VI  AT AV S+PAMI+QRANPGLYE+++NGVLQ+ + FD+S
Sbjct  91   VGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKS  150

Query  140  KLTCQAMAAKMADKV--DQAGWGALAQNQEMQHNLEQSGGDAVMAVKDTEsnngnngvsw  197
            KL C++MA K+AD    D+++W   A  +E ++ +  SGGDA+ A       +G++G +W
Sbjct  151  KLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATW  210

Query  198  vggQKAGGNGQQPIRVTSDVVKAGYNLLHNRSVEDTSAVGSGCQNGAICQAWSSPEEASE  257
            VGG+KAGG+GQ +I+ T D+ KAGYN+++N SV   S+V++G  +G+ CQ   ++EEA+ 
Sbjct  211  VGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAA  270

Query  258  WATRVLGetev----------etcddcetLRVTAGTGLSPLIQETYTEHLEGLQHMVSRA  307
               +VLG+  +              D       AGTG++P++++T  E+LE L  +V+ +
Sbjct  271  AVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGT  330

Query  308  DQPTPENLSKVSSPLLQVSRGVIEGLRDDPDQNLLARRLASETALSSVIYKAMLLQRTLF  367
            + PT  NL K+ S  L+V+RGVI++L+ DPD   L +RLA+E A+S  I  ++ ++R L 
Sbjct  331  EAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLT  390

Query  368  AGSHEPNVASAQPATTALNSNVETLEREIRLLQTELQVRQSLATNTASLVLDRH  421
            +G  EPN A    A +  +  +E+L+RE+  L+ E+++R+ +A NTA +V+ R+
Sbjct  391  TGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVARE  444

79) Pput_2954 in NC_009512


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  220 bits (820),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 277/414 (67%), Gaps = 13/414 (3%)

Query  20   AENGYHLGDQAQVLDDRVMYTIgggsaagapssLYRPNGLGVGMSWRANMMCGNMNLSNT  79
            + +GY  + ++ V  D++ Y+IGGGS  ++P+++Y  + +G++ +  +++MCGN ++  T
Sbjct  32   SGDGYGKSVNGAV-SDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTT  90

Query  80   LQNQLNGATQGFQQIMGNVIQNATQAVMSLPAMIIQRANPGLYELLSNGVLQGRIDFDRS  139
            + NQLNG T+GF+++MG+VI  AT AV S+PAMI+QRANPGLYE+++NGVLQ+ + FD+S
Sbjct  91   VGNQLNGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKS  150

Query  140  KLTCQAMAAKMADKV--DQAGWGALAQNQEMQHNLEQSGGDAVMAVKDTEsnngnngvsw  197
            KL C++MA K+AD    D+++W   A  +E ++ +  SGGDA+ A       +G++G +W
Sbjct  151  KLNCESMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATW  210

Query  198  vggQKAGGNGQQPIRVTSDVVKAGYNLLHNRSVEDTSAVGSGCQNGAICQAWSSPEEASE  257
            VGG+KAGG+GQ +I+ T D+ KAGYN+++N SV   S+V++G  +G+ CQ   ++EEA+ 
Sbjct  211  VGGKKAGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGSACQKFKNSEEAAA  270

Query  258  WATRVLGetev----------etcddcetLRVTAGTGLSPLIQETYTEHLEGLQHMVSRA  307
               +VLG+  +              D       AGTG++P++++T  E+LE L  +V+ +
Sbjct  271  AVVKVLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGT  330

Query  308  DQPTPENLSKVSSPLLQVSRGVIEGLRDDPDQNLLARRLASETALSSVIYKAMLLQRTLF  367
            + PT  NL K+ S  L+V+RGVI++L+ DPD   L +RLA+E A+S  I  ++ ++R L 
Sbjct  331  EAPTQANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLT  390

Query  368  AGSHEPNVASAQPATTALNSNVETLEREIRLLQTELQVRQSLATNTASLVLDRH  421
            +G  EPN A    A +  +  +E+L+RE+  L+ E+++R+ +A NTA +V+ R+
Sbjct  391  TGQSEPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVARE  444

80) ebA2397 in NC_006513


> NC_003198_P9|54|G47|16763045|NP_458662.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|45319..46749|STY4577|-|hypothetical 
protein
Length=476

 Score =  215 bits (799),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 177/437 (41%), Positives = 289/437 (67%), Gaps = 16/437 (3%)

Query  42   GASVSGSVIGDDVLYSIgggravsmggag-NMQSIGVGIGWNSNLICGDMSITTTLQNQL  100
            G SV+G+V +D ++YSIGGG  +S  G+   M+ IG++ G +S+L+CG+  I TT+ NQL
Sbjct  37   GKSVNGAV-SDKLFYSIGGGSVISTPGTMYGMKRIGLDAGLSSDLMCGNFDIKTTVGNQL  95

Query  101  NGITNGFQAIMSSVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKMTCR  160
            NG+TNGF+ +M+ VI +AT+AV+S+PA+I+QRA+PGLY+++TNGVLQA L FD+SK+ C 
Sbjct  96   NGVTNGFKDLMGDVITGATGAVSSMPAMILQRANPGLYEMITNGVLQAGLAFDKSKLNCE  155

Query  161  AIANRLADMA-GGQAGWDQLAEGMALRdavssadavsaIEQAESNK--GNSGVPWVggsn  217
            ++AN+LAD + G++++W + A     ++AVS++++ +   +    K  G+ G  WVGG +
Sbjct  156  SMANKLADYTLGDKSSWTESAVREEYKEAVSASGGDALRAEEARTKASGKEGATWVGGKK  215

Query  218  aggsgqgsIKVVGDVTRAGYNLLNGRSATDTSSIPRTSCGNRLTCQTwsspsaaaawaTR  277
            AGG GQ +I+   D+++AGYN++N  S T  S+++  SC    +CQ   ++  AAA   +
Sbjct  216  AGGKGQPAIQPTRDLAKAGYNMMNNLSVTSNSTVSAGSCKGS-ACQKFKNSEEAAAAVVK  274

Query  278  VLGEREQRTCES---C-------TKTQTTPGVGLTPVIQEEYETKLQALQELVTGAKPTT  327
            VLG+R  RTC     C       ++  T +G G++P++++    +L+ L  LV G+ + T
Sbjct  275  VLGDRSIRTCKDATECGSGGIDNAQGTTIAGTGFAPMLEDTTKENLEQLVKLVNGTEAPT  334

Query  328  VANLEAAGSNSLPITRGVIEALRDEPDQDLLGKRlaseaalssalekalllQRTLLTGKK  387
             ANL+   S SL +TRGVI+AL+ +PD + L +RLA+E A+S ++E +L ++R L TG+ 
Sbjct  335  QANLDKIKSGSLKVTRGVIDALKRDPDAGALVQRLAGELAMSDTIETGLAMRRMLTTGQS  394

Query  388  EPNVAANELAVKAVDQENSALEQEINNLKTELELRRTLAGNSAMAIVQRHGTRAGGSRGI  447
            EPN A +  A+   D+   AL++E+N+LK E+ELRR +A N+A+ +V R+  R+  +   
Sbjct  395  EPNAADQPQAMAEADRRIEALDRELNSLKLEMELRREVAKNTALVVVAREENRSVTNPQK  454

Query  448  FEGDTTRDRLKEVQKPR  464
                 +  RL E++  +
Sbjct  455  ESQTNADTRLSELETRK  471