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Homologs of SSU98_0960 gene of NC_009443_P1

113

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SSU05_0953
( YP_001198319.1 )

DNA recombinase

NC_009442
(Streptococcus suis 05ZYH33)

0.0

100

2) SSU98_0960
( YP_001200518.1 )

DNA recombinase

NC_009443
(Streptococcus suis 98HAH33)

0.0

100

3) SSUSC84_0859
( YP_003024869.1 )

DNA recombinase

NC_012924
(Streptococcus suis SC84)

0.0

100

4) Amet_4005
( YP_001321746.1 )

resolvase domain-containing protein

NC_009633
(Alkaliphilus metalliredigens QYMF)

0.0

5) Clo1100_3560
( YP_005149490.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

0.0

6) Desdi_1292
( YP_007220199.1 )

site-specific recombinase, DNA invertase Pin

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

0.0

7) DET1067
( YP_181782.1 )

phage integrase site specific recombinase

NC_002936
(Dehalococcoides ethenogenes 195)

5e-160

8) BCE_0419
( NP_976747.1 )

DNA recombinase, putative

NC_003909
(Bacillus cereus ATCC 10987)

8e-159

9) HM1_2862
( YP_001681382.1 )

DNA recombinase

NC_010337
(Heliobacterium modesticaldum Ice1)

5e-158

10) CKL_2620
( YP_001396003.1 )

hypothetical protein

NC_009706
(Clostridium kluyveri DSM 555)

7e-158

11) CKR_2321
( YP_002472786.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

7e-158

12) EFAU004_01597
( YP_005354799.1 )

resolvase family site-specific recombinase

NC_017022
(Enterococcus faecium Aus0004)

8e-158

13) Tthe_0815
( YP_003851447.1 )

Resolvase domain

NC_014410
(Thermoanaerobacterium thermosaccharolyticum DSM 571)

2e-157

14) smi_1713
( YP_003446815.1 )

site-specific recombinase

NC_013853
(Streptococcus mitis B6)

3e-157

15) Pmob_0430
( YP_001567492.1 )

resolvase domain-containing protein

NC_010003
(Petrotoga mobilis SJ95)

8e-156

16) Tph_c22970
( YP_006920986.1 )

resolvase

NC_018870
(Thermacetogenium phaeum DSM 12270)

3e-155

17) Ccel_2814
( YP_002507088.1 )

resolvase

NC_011898
(Clostridium cellulolyticum H10)

4e-155

18) Clocl_3656
( YP_005048041.1 )

site-specific recombinase, DNA invertase Pin

NC_016627
(Clostridium clariflavum DSM 19732)

4e-155

19) Clo1313_2376
( YP_005688844.1 )

resolvase domain-containing protein

NC_017304
(Clostridium thermocellum DSM 1313)

9e-155

20) Thet_1635
( YP_003904509.1 )

Resolvase domain-containing protein

NC_014538
(Thermoanaerobacter sp. X513)

1e-151

21) Teth514_1274
( YP_001662903.1 )

resolvase domain-containing protein

NC_010320
(Thermoanaerobacter sp. X514)

1e-151

22) Tph_c23370
( YP_006921026.1 )

resolvase

NC_018870
(Thermacetogenium phaeum DSM 12270)

1e-151

23) Clocl_3697
( YP_005048075.1 )

site-specific recombinase, DNA invertase Pin

NC_016627
(Clostridium clariflavum DSM 19732)

2e-151

24) Cthe_1671
( YP_001038087.1 )

recombinase

NC_009012
(Clostridium thermocellum ATCC 27405)

3e-151

25) Fnod_1612
( YP_001411109.1 )

resolvase domain-containing protein

NC_009718
(Fervidobacterium nodosum Rt17-B1)

3e-150

26) Ferpe_0670
( YP_005470916.1 )

site-specific recombinase, DNA invertase Pin

NC_017095
(Fervidobacterium pennivorans DSM 9078)

3e-150

27) Mahau_2800
( YP_004464747.1 )

resolvase domain-containing protein

NC_015520
(Mahella australiensis 50-1 BON)

3e-150

28) SpiGrapes_2876
( YP_005063638.1 )

site-specific recombinase, DNA invertase Pin

NC_016633
(Sphaerochaeta pleomorpha Grapes)

4e-150

29) LRC_05140
( YP_004831754.1 )

recombinase/Resolvase

NC_015975
(Lactobacillus ruminis ATCC 27782)

1e-146

30) HM1_2980
( YP_001681500.1 )

DNA recombinase

NC_010337
(Heliobacterium modesticaldum Ice1)

8e-147

31) SCI_1214
( YP_008499141.1 )

hypothetical protein

NC_022238
(Streptococcus constellatus C1050)

3e-145

32) SCRE_1155
( YP_008495551.1 )

hypothetical protein

NC_022236
(Streptococcus constellatus C232)

3e-145

33) SCR2_1155
( YP_008511313.1 )

hypothetical protein

NC_022245
(Streptococcus constellatus C818)

3e-145

34) MELS_2017
( YP_004767062.1 )

site-specific recombinase

NC_015873
(Megasphaera elsdenii DSM 20460)

1e-141

35) M643_03560
( YP_008280281.1 )

serine recombinase

NC_021826
(Listeria monocytogenes N1-011A)

5e-131

36) LMOSLCC2755_1716
( YP_006682166.1 )

recombinase/resolvase family protein

NC_018587
(Listeria monocytogenes SLCC2755)

3e-128

37) HM1_0629
( YP_001679245.1 )

hypothetical protein

NC_010337
(Heliobacterium modesticaldum Ice1)

5e-123

38) HMPREF0538_20498
( YP_004649000.1 )

phage integrase family site-specific recombinase

NC_015697
(Lactobacillus reuteri SD2112)

2e-121

39) LJP_1443
( YP_005862715.1 )

Site-specific recombinase, DNA invertase Pin related protein

NC_017477
(Lactobacillus johnsonii DPC 6026)

4e-121

40) Ccel_2729
( YP_002507018.1 )

resolvase

NC_011898
(Clostridium cellulolyticum H10)

7e-119

41) HMPREF0538_20542
( YP_004649044.1 )

phage integrase family site-specific recombinase

NC_015697
(Lactobacillus reuteri SD2112)

3e-115

42) Dtox_1526
( YP_003191013.1 )

resolvase domain-containing protein

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

2e-114

43) Csac_0475
( YP_001179304.2 )

recombinase

NC_009437
(Caldicellulosiruptor saccharolyticus DSM 8903)

8e-114

44) Desgi_3517
( YP_007946519.1 )

site-specific recombinase, DNA invertase Pin

NC_021184
(Desulfotomaculum gibsoniae DSM 7213)

3e-113

45) DSY3426
( YP_519659.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

4e-113

46) CLJU_c03770
( YP_003778561.1 )

recombinase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

3e-112

47) LGAS_1491
( YP_815285.1 )

site-specific recombinase, DNA invertase Pin related protein

NC_008530
(Lactobacillus gasseri ATCC 33323)

4e-112

48) DHBDCA_p1321
( YP_006910335.1 )

Site-specific recombinase

NC_018866
(Dehalobacter sp. DCA)

4e-112

49) Desdi_1399
( YP_007220298.1 )

site-specific recombinase, DNA invertase Pin

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

6e-112

50) Desaci_1341
( YP_006465699.1 )

site-specific recombinase, DNA invertase Pin

NC_018068
(Desulfosporosinus acidiphilus SJ4)

1e-110

51) LM5578_1855
( YP_003413965.1 )

DNA recombinase

NC_013766
(Listeria monocytogenes 08-5578)

2e-110

52) LM5923_1807
( YP_003417010.1 )

DNA recombinase, putative

NC_013768
(Listeria monocytogenes 08-5923)

2e-110

53) Clo1100_3475
( YP_005149411.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

3e-109

54) Clo1100_3409
( YP_005149348.1 )

site-specific recombinase, DNA invertase Pin

NC_016791
(Clostridium sp. BNL1100)

5e-109

55) Closa_2762
( YP_003822927.1 )

resolvase domain-containing protein

NC_014376
(Clostridium saccharolyticum WM1)

6e-108

56) DSY4590
( YP_520823.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

8e-108

57) ROI_03000
( YP_007830661.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021040
(Roseburia intestinalis M50/1)

1e-107

58) EUR_11320
( YP_007772381.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021010
(Eubacterium rectale DSM 17629)

8e-107

59) PPE_00831
( YP_003869219.1 )

Site-specific recombinase

NC_014483
(Paenibacillus polymyxa E681)

9e-104

60) HPL003_12150
( YP_005075410.1 )

Site-specific recombinase

NC_016641
(Paenibacillus terrae HPL-003)

1e-101

61) Tph_c07870
( YP_006919518.1 )

resolvase

NC_018870
(Thermacetogenium phaeum DSM 12270)

3e-100

62) HM1_0131
( YP_001678761.1 )

resolvase, n-terminal:recombinase

NC_010337
(Heliobacterium modesticaldum Ice1)

7e-100

63) DCF50_p1382
( YP_006913373.1 )

putative site-specific recombinase

NC_018867
(Dehalobacter sp. CF)

1e-95

64) TepRe1_0923
( YP_004460397.1 )

recombinase

NC_015519
(Tepidanaerobacter acetatoxydans Re1)

4e-95

65) TepiRe1_1004
( YP_008618783.1 )

Recombinase

NC_019954
(Tepidanaerobacter acetatoxydans Re1)

4e-95

66) Closa_2757
( YP_003822922.1 )

resolvase domain-containing protein

NC_014376
(Clostridium saccharolyticum WM1)

9e-95

67) ES1_13620
( YP_007839871.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021043
(Eubacterium siraeum V10Sc8a)

2e-93

68) Bsel_2979
( YP_003701028.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

8e-92

69) Bsel_2961
( YP_003701012.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

1e-91

70) Dtox_1527
( YP_003191014.1 )

resolvase domain-containing protein

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

3e-91

71) Bsel_2989
( YP_003701036.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

3e-90

72) OBV_44390
( YP_004884143.1 )

putative recombinase

NC_016048
(Oscillibacter valericigenes Sjm18-20)

1e-89

73) Dhaf_2440
( YP_002458904.1 )

resolvase

NC_011830
(Desulfitobacterium hafniense DCB-2)

4e-89

74) Cthe_1700
( YP_001038114.1 )

recombinase

NC_009012
(Clostridium thermocellum ATCC 27405)

5e-89

75) Rumal_3915
( YP_004090224.1 )

Resolvase domain

NC_014825
(Ruminococcus albus 7)

6e-89

76) Rumal_2253
( YP_004105372.1 )

resolvase domain-containing protein

NC_014833
(Ruminococcus albus 7)

6e-89

77) SANR_0787
( YP_008500522.1 )

site specific recombinase

NC_022239
(Streptococcus anginosus C238)

9e-89

78) Desdi_1761
( YP_007220632.1 )

site-specific recombinase, DNA invertase Pin

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

1e-87

79) SDSE_1359
( YP_006904911.1 )

hypothetical protein

NC_019042
(Streptococcus dysgalactiae AC-2713)

2e-87

80) SAK_0764
( YP_329391.1 )

prophage LambdaSa04, site-specific recombinase resolvase

NC_007432
(Streptococcus agalactiae A909)

5e-87

81) Closa_3176
( YP_003823329.1 )

resolvase domain-containing protein

NC_014376
(Clostridium saccharolyticum WM1)

1e-85

82) Ethha_1857
( YP_004092112.1 )

Resolvase domain

NC_014828
(Ethanoligenens harbinense YUAN-3)

4e-85

83) CKL_3840
( YP_001397188.1 )

hypothetical protein

NC_009706
(Clostridium kluyveri DSM 555)

4e-85

84) HMPREF0573_11203
( YP_003719016.1 )

site-specific recombinase

NC_014246
(Mobiluncus curtisii ATCC 43063)

7e-84

85) Acin_1875
( YP_004897224.1 )

Site-specific recombinase

NC_016077
(Acidaminococcus intestini RyC-MR95)

7e-84

86) btf_176
( YP_007484627.1 )

site-specific recombinase, resolvase family

NC_020387
(Dehalococcoides mccartyi BTF08)

1e-82

87) Rumal_3820
( YP_004090136.1 )

Resolvase domain

NC_014825
(Ruminococcus albus 7)

7e-83

88) CKR_3390
( YP_002473855.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

7e-82

89) ES1_04570
( YP_007839127.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021043
(Eubacterium siraeum V10Sc8a)

2e-81

90) ACL_0580
( YP_001620573.1 )

serine recombinase

NC_010163
(Acholeplasma laidlawii PG-8A)

4e-81

91) SSUJS14_0687
( YP_006076047.1 )

hypothetical protein

NC_017618
(Streptococcus suis JS14)

8e-81

92) NJAUSS_0662
( YP_007570617.1 )

Putative DNA recombinase

NC_020526
(Streptococcus suis SC070731)

8e-81

93) Arch_1214
( YP_003697538.1 )

resolvase

NC_014218
(Arcanobacterium haemolyticum DSM 20595)

4e-80

94) CXIVA_07110
( YP_004707780.1 )

hypothetical protein

NC_015737
(Clostridium sp. SY8519)

4e-80

95) Acin_1311
( YP_004896675.1 )

site-specific recombinase

NC_016077
(Acidaminococcus intestini RyC-MR95)

3e-79

96) SeseC_00920
( YP_006042664.1 )

hypothetical protein

NC_017582
(Streptococcus equi ATCC 35246)

5e-78

97) Acin_1945
( YP_004897293.1 )

site-specific recombinase

NC_016077
(Acidaminococcus intestini RyC-MR95)

1e-77

98) SANR_1327
( YP_008501033.1 )

putative recombinase

NC_022239
(Streptococcus anginosus C238)

1e-74

99) SDSE_1493
( YP_006905045.1 )

hypothetical protein

NC_019042
(Streptococcus dysgalactiae AC-2713)

2e-74

100) Arch_1578
( YP_003697886.1 )

resolvase

NC_014218
(Arcanobacterium haemolyticum DSM 20595)

7e-74

101) PALO_09295
( YP_007871819.1 )

resolvase

NC_021064
(Propionibacterium avidum 44067)

8e-69

102) EUR_11340
( YP_007772383.1 )

Site-specific recombinases, DNA invertase Pin homologs

NC_021010
(Eubacterium rectale DSM 17629)

2e-67

103) Tthe_0813
( YP_003851446.1 )

Resolvase domain

NC_014410
(Thermoanaerobacterium thermosaccharolyticum DSM 571)

8e-64

104) Cthe_1609
( YP_001038026.1 )

recombinase

NC_009012
(Clostridium thermocellum ATCC 27405)

9e-64

105) Tph_c22990
( YP_006920988.1 )

recombinase

NC_018870
(Thermacetogenium phaeum DSM 12270)

2e-63

106) Pmob_0428
( YP_001567491.1 )

resolvase domain-containing protein

NC_010003
(Petrotoga mobilis SJ95)

2e-63

107) SpiGrapes_2795
( YP_005063561.1 )

site-specific recombinase, DNA invertase Pin

NC_016633
(Sphaerochaeta pleomorpha Grapes)

3e-63

108) Mahau_2802
( YP_004464749.1 )

resolvase domain-containing protein

NC_015520
(Mahella australiensis 50-1 BON)

5e-63

109) Bsel_2980
( YP_003701029.1 )

resolvase domain-containing protein

NC_014219
(Bacillus selenitireducens MLS10)

2e-61

110) Apre_1776
( YP_003142358.1 )

resolvase domain-containing protein

NC_013164
(Anaerococcus prevotii DSM 20548)

3e-60

111) Apre_0693
( YP_003152453.1 )

resolvase domain-containing protein

NC_013171
(Anaerococcus prevotii DSM 20548)

3e-60

112) MGAS2096_Spy1103
( YP_600699.1 )

site-specific recombinase

NC_008023
(Streptococcus pyogenes MGAS2096)

5e-60

113) Desde_1454
( YP_006429667.1 )

site-specific recombinase, DNA invertase Pin

NC_018017
(Desulfitobacterium dehalogenans ATCC 51507)

2e-55

• Sequence Alignments

1) SSU05_0953 in NC_009442


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  815 bits (3084),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 520/520 (100%), Positives = 520/520 (100%), Gaps = 0/520 (0%)

Query  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60
            MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120
            NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQV  180
            QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240
            NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300
            RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360
            AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420
            RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480
            NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520
            KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

2) SSU98_0960 in NC_009443


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  815 bits (3084),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 520/520 (100%), Positives = 520/520 (100%), Gaps = 0/520 (0%)

Query  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60
            MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120
            NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQV  180
            QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240
            NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300
            RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360
            AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420
            RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480
            NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520
            KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

3) SSUSC84_0859 in NC_012924


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  815 bits (3084),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 520/520 (100%), Positives = 520/520 (100%), Gaps = 0/520 (0%)

Query  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60
            MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120
            NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQV  180
            QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240
            NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300
            RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360
            AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420
            RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480
            NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520
            KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

4) Amet_4005 in NC_009633


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  749 bits (2834),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 463/520 (90%), Positives = 498/520 (96%), Gaps = 0/520 (0%)

Query  1    MAGKNITVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNLSYEVQVAHYTEYIKKN  60
            M+ KNI VIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQN SYEVQV+HYTE+IKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   TEWEFAGIFADDGISGTNTKKREEFNRMIEECMEGNIDLVITKSISRFARNTLDCLKYIR  120
             EWEFAGIFADDGISGTNTKKR+EFNRMI ECM+GNID+VITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNIAVYFEKENINTMDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQV  180
            QLK+KNI+VYFEKENINT DAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFMGYTKDEEGNLIIVPEEAEIIKRIYREYLEGKSLVGIGRDLEKDGILTAAGKPRW  240
            NH+RFMGYTKDE+GNL IVPEEAEIIKRIYREYLEG+SLVGIGR LEKDGILTAAGKPRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  RPETIKKILLNEKYIGDALLQKTFTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300
            RPE++KKIL NEKYIGDALLQKT TVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  AQEELHRRSNIYTGADKNKRIYSSKYALSTITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360
            AQEE+HRRSNIYTG +KNKRIYSSKYALS+ITFCGDCGDIYRRVYWNIHGRKEFVWRCVT
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RIEQGPEVCKNRTVKETELYDAVMTAINRLLAGGDNMIRILEENIYAVIGDTTEYKISEI  420
            RIEQGPEVCKNRTVKE ELY+AVMTAIN+LLAGG+NMI+ LEENI AVIG+TTEY+ISEI
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  NTLLEEKQKEVINLANKGKDYDFLADEIDKLREKRQTLLVEDASLSGENERINELIDFIR  480
            N  LEEKQKE+I+LANKG+DYD LADEID LR+KRQ LLVEDASLSGENERINELI+FIR
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  NNKYRTLLYDDTLVRKIIQNVTVYDDHFVICFKSGIEIEV  520
            +NK+RTL YDD LVRKIIQ+VTVY++HFVI FKSGIE+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

5) Clo1100_3560 in NC_016791


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  748 bits (2830),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 457/520 (88%), Positives = 499/520 (96%), Gaps = 0/520 (0%)

Query  1    MAEKNITVIPARKRVGSTAAKEIIKKLRVAAYCRVSTETEEQNSSYEVQVAHYTEFIKKN  60
            M+EKNI VIPARKRVGSTAAKE IKKLRVAAYCRVSTETEEQNSSYEVQV+HYTEFIKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   TEWEFAGIFADDGISGTNTKKREEFNRMIDECMEGKIDLVISKSISRFARNTLDCLKYIR  120
             EWEFAGIFADDGISGTNTKKR+EFNRMI ECM+G+ID+VI+KSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNISVFFEKENINTMDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQV  180
            QLK+KNISV+FEKENINT DAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHKRFMGYTKDEDGNLIIVPGEAKIIKRIYREYLEGKSLAGIGRDLEKDGILTAAGKPKW  240
            NHKRFMGYTKDEDGNL IVP EA IIKRIYREYLEG+SL GIGR LEKDGILTAAGKP+W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  RPETLKKILTNEKYIGDALLQKTTTVDFLTKKRVKNEGHLPQYYVENNHDAIIPKELFLQ  300
            RPE++KKIL NEKYIGDALLQKT TVDFLTKKRVKNEGH+PQYYVEN+H+AIIPKELFLQ
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  AQEELHRRNNIYTGEDKNKRIYSSKYALSSITFCGDCGDIYRRVYWNIHGRKEIVWRCVT  360
            AQEE+HRR+NIYTGE+KNKRIYSSKYALS+ITFCGDCGDIYRRVYWNIHGRKE+VWRCVT
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RIEQGPEVCKSRTVKEGDLYDAVMTAINRLLAGGDNMIKTLEENIHAVIGDATEYQISEI  420
            RIEQGPEVCK+RTVKE++LY+AVMTAIN+LLAGG+NMIKTLEENIHAVIG++TEYQISEI
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  NTLLEEKQKELISLANKGKDYEPLADEIDNLREKRQNLLVEDASLSGENERINELIEFIR  480
            N  LEEKQKELI LANKG+DY+ LADEID+LR+KRQ LLVEDASLSGENERINELIEFIR
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  NNKYRTQRYDDALVRKLIQNVTVYNDHFVICFKSGIEVEV  520
            +NK+RT  YDD LVRK+IQ+VTVY++HFVI FKSGIE+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

6) Desdi_1292 in NC_019903


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  740 bits (2798),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 450/520 (87%), Positives = 497/520 (96%), Gaps = 0/520 (0%)

Query  1    MAEKNITVIPARKRVGSTAAKEKVKKLRVAAYCRVSTETEEQNSSYEVQVAHYTEFIKKN  60
            M+EKNI VIPARKRVGSTAAKEK+KKLRVAAYCRVSTETEEQNSSYEVQV+HYTEFIKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   AEWEFAGIFADDGISGTNTKKREEFNRMIDGCMEGNIDLVITKSISRFARNTLDCLKYIR  120
             EWEFAGIFADDGISGTNTKKR+EFNRMI  CM+GNID+VITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKDKNISVFFEKENINTMDAKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGKVQV  180
            QLKDKNISV+FEKENINT DAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFMGYTKDDEGNLIIVPEEAEIIKRIYREYLEGKSLAGIGRDLEKDDILTAAGKPRW  240
            NH+RFMGYTKD++GNL IVPEEAEIIKRIYREYLEG+SL GIGR LEKD+ILTAAGKPRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  RPETIKKILMNEKYIGDALLQKTFTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300
            RPE++KKIL NEKYIGDALLQKT TVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  AQEELHRRNNIYTGADKNKRLYSSKYALSTITFCGDCGDIYRRVYWNIRGRKEFVWRCVT  360
            AQEE+HRR+NIYTG +KNKR+YSSKYALS+ITFCGDCGDIYRRVYWNI+GRKEFVWRCVT
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RIEQGPETCKNRTVKEGDLYDAVMTAINKLLAGGDNMMRTLEENIHAIIGDTTEYRISEI  420
            RIEQGPE CKNRTVKE++LY+AVMTAINKLLAGG+NM++TLEENIHA+IG+TTEY+ISEI
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  NTLLEEKQKEIISLANNGKDFEFLSEEVDKLREERQRLLVEDASLSGENERINELIGFIC  480
            N  LEEKQKE+I LAN+G+D++ L++E+D LR+ RQ LLVEDASLSGENERINELI FI 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  RNKYRTLLYDDTLVRKLIQNVTVYEDHFVISFKSGIEIEV  520
            +NK+RTL YDD LVRK+IQ+VTVYE+HFVI+FKSGIE+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

7) DET1067 in NC_002936


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  558 bits (2105),  Expect = 5e-160, Method: Compositional matrix adjust.
 Identities = 319/516 (62%), Positives = 407/516 (79%), Gaps = 2/516 (0%)

Query  1    MVIPAKRQVGNTVKQSEQKKLRVAAYCRVSTDSDEQESSYEAQVTHYTEYIQKNPDWELA  60
            MVIPA+++VG+T  +   KKLRVAAYCRVST+++EQ+SSYE QV+HYTE+I+KN +WE+A
Sbjct  7    MVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFA  66

Query  61   GIFADDGISGTNTKKRDEFNRMIDECMSGNIDMIITKSISRFARNTLDCLQYIRQLKDKN  120
            GIFADDGISGTNTKKRDEFNRMI ECM GNIDM+ITKSISRFARNTLDCLQYIRQLKDKN
Sbjct  67   GIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKN  126

Query  121  IPVYFEKESINTLDAKGEVLLTIMASLAQQESQSMSENIKLGLQYRYQQGKVQVNHNRFL  180
            I+VYFEKE+INT DAKGEVLLTIMASLAQQESQS+S+N+KLGLQYRYQQGKVQVNH+RF+
Sbjct  127  ISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFM  186

Query  181  GYTKDENGNLVIDPEQAEIVKRIYREYLEGSSMDKIASGLMADGILTGAGKEKWHTSTIN  240
            GYTKDE+GNL I PE+AEI+KRIYREYLEG S+  I+ +L  DGILT+AGK +W+  +++
Sbjct  187  GYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVK  246

Query  241  KILRNEKYMGDALLQKTYTTDFLTKKRIKNNGTVPQYYVEGDHEAIIPKDLFMQVQAELV  300
            KIL+NEKY+GDALLQKT T DFLTKKR+KN+G VPQYYVE  HEAIIPK+LF+Q Q E+ 
Sbjct  247  KILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIH  306

Query  301  RRRVVHVSPTGKKRSFSCNHCFAQMVFCGDCGELYRRVHWNNHGCKSIVWRCISRLEPGS  360
            RR  +  +   +KR +S +  ++ + FCGDCG++YRRV WN HG K +VWRC++R+E G+
Sbjct  307  RRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGP  366

Query  361  ADTNCTNRTVNELLLQEVTVTVINQILTERGTFLKQLQANIAKAVVSADTLSPDGIQARL  420
                C NRTV+E  L    +T IN++L+     +K L+ NI   +  +       I+  L
Sbjct  367  E--VCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNSL  424

Query  421  EELQKELIKKANNKQDYDAIADEILRLREQKEQSEVDSHHREEAMNRIKELQDFIFKQKT  480
            EE QKELIK AN+ QDYD +ADEI  LR++++   V+        +RI+EL +FI K+K 
Sbjct  425  EEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNKF  484

Query  481  DITEFDEALVKKLIEKITVFADHFTVEFKSGITIDI  516
               E+D+ LV+K+I+ +TV+ +HF + FKSGI ++I
Sbjct  485  RTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

8) BCE_0419 in NC_003909


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  553 bits (2089),  Expect = 8e-159, Method: Compositional matrix adjust.
 Identities = 331/517 (65%), Positives = 426/517 (83%), Gaps = 0/517 (0%)

Query  5    RNVTVIPAIKRIGNNKNSESKPKIRVAAYCRVSTDSEEQASSYDIQIEHYTNYIKKNKEW  64
            +N+ VIPA KR+G+    E   K+RVAAYCRVST++EEQ SSY++Q+ HYT++IKKN+EW
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  65   ELAGIFADDGITGTNTKKRDEFNRMIEECMAGNIDMIITKSISRFARNTLDCLKYIRQLK  124
            E+AGIFADDGI+GTNTKKRDEFNRMI ECM GNIDM+ITKSISRFARNTLDCL+YIRQLK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  125  DKNIAVFFEKENINTLDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEVQVNHK  184
            DKNI+V+FEKENINT D+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNHK
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKAKWRPE  244
            RF+GYTKDE+ +L I PE AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++WRPE
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRDLFMQVQE  304
            ++KKILQNEKYIGDALLQKT TVDFL+KKRVKN+G VPQYYVENSHE+IIP++LF+Q QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  305  EMVRRANLRGGKGGKKRVYSSKYALSSIVYCGQCGDIYRRVHWNNRGYKSIVWRCVSRLE  364
            E+ RR+N+  G G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+R+E
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  365  EKDSECTAPTINEETLQTAVVKAINELLANKEPFLSTLQKNIATIFNEENDHTTDDIDGK  424
            +    C   T++E+ L  AV+ AIN LLA  +  + TL+ NI +++ E  +    +I+  
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423

Query  425  leelqqqlliqAKSKNDYEDVADEIYHLRELKQNALVENAEREGKRQRIADMTDFLNEQS  484
            LEE Q++L+  A+  +DY+++ADEI +LR+ +Q  LVE+A   G  +RI ++ +F+  + 
Sbjct  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483

Query  485  CELEEYDEQLVRRLIEKVTIYEDKLTVEFKSGIEIGI  521
                EYD++LVR++I+ VT+YE+ + + FKSGIE+ I
Sbjct  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

9) HM1_2862 in NC_010337


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  551 bits (2079),  Expect = 5e-158, Method: Compositional matrix adjust.
 Identities = 323/519 (63%), Positives = 417/519 (81%), Gaps = 0/519 (0%)

Query  3    AAKTVSVIPAKPKQNRTAEANARQKLRVAAYCRVSTDNEEQASSYEVQIEHYTRYIQSNP  62
            + K + VIPA+ +   TA  +  +KLRVAAYCRVST+ EEQ SSYEVQ+ HYT +I+ N 
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   EWELAGIFADEGITGTNTKKRAEFNRMIEECMAGRIDMVITKSISRFARNTLDCLKYIRQ  122
            EWE+AGIFAD+GI+GTNTKKR EFNRMI ECM G IDMVITKSISRFARNTLDCL+YIRQ
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKDKGIPVFFEKENINTMDSKGEILLTIMaslaqqesqslsqNVRMGIAFRFQNGEIQVN  182
            LKDK I+V+FEKENINT D+KGE+LLTIMASLAQQESQSLSQNV++G+ +R+Q+G +QVN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  HNRFLGYTKDENKRLVIVPEEAEIVKRIYREFLEGASLLQIGRGLEADGILTAAGKPKWR  242
            H+RF+GYTKDE+  L IVPEEAEI+KRIYRE+LEG SL+ IGR+LE DGILTAAGKP+WR
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  PETIRKILKNEKYIGDALLQKTYTVDFLSKKRVINNGIVPQYYVENSHEPIIPRELFLQV  302
            PE+++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+ELFLQ 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEELARRANLRSGEKGGKRVYSSKYALSSIVFCGECGEIYRRVHWNNRGKKSIVWRCVSR  362
            QEE+ RR+N+ +GE   KR+YSSKYALS+I FCG+CG+IYRRV WN +G+K +VWRCV+R
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  363  LEEKGSDCGSPTVSEEDLQKAVLKAINSIIAGRDEFIETLRRNIETALGGEFDESTEAID  422
            +E+    C + TV E++L  AV+ AIN ++AG ++ I TL  NI++ +G   +     I+
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  423  KKLEELQHELLRLASTKAAYDSVANEIYRLRELRQETLASNSERQNKRQRIAEMMDFLES  482
            + LEE Q EL++LA+    YD +A+EI  LR+ RQ  L  ++      +RI E+++F+  
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  483  QSGVIFEYDEKLVRWLVEKVTVFEGGIVVKFKTGISVEL  521
            +    +EYD+KLVR +++ VTV+EG +V+ FK+GI +E+
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

10) CKL_2620 in NC_009706


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  550 bits (2077),  Expect = 7e-158, Method: Compositional matrix adjust.
 Identities = 328/519 (64%), Positives = 425/519 (82%), Gaps = 0/519 (0%)

Query  2    VVSRNVTVIPAIKRVGNNKNSESKPKIRVAAYCRVSTDSEEQASSYDIQIEHYTNYIKKN  61
            +  +N+ VIPA KRVG+    E   K+RVAAYCRVST++EEQ SSY++Q+ HYT++IKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121
            +EWE+AGIFADDGI+GTNTKKR+EFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEIQV  181
            QLKDKNI+V+FEKENINT D+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG +QV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  182  NHKRFLGYTKDENKQLVIDPKGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKAKW  241
            NHKRF+GYTKDE+ +L I P  AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHDPIIPRDLFMQ  301
            RPE++KKILQNEKYIGDALLQKT TVDFL+KKRVKN+G VPQYYVENSH++IIP++LF+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  302  VQEEMVRRANLRGGKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361
             QEE+ RR+N+  G G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  362  RLEEKGSECTASTINEEILQTAVVKAINELLANKEPFLSTLQKNIATVLNEENDNATVDI  421
            R+E+    C   T++E+ L  AV+ AIN LLA  +  + TL+ NI +V+ E  +    +I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  422  DGKleelqqqlliqAKSKNDYEDVADEIYRLRELKQNALVENAEREGKRQRIAEMTDFLN  481
            +  LEE Q++L+  A+  +DY+++ADEI  LR+ +Q  LVE+A   G  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  482  EQSCELEEYDEQLVRRLIEKVTIYEDKLTVEFKSGIEID  520
             +     EYD++LVR++I+ VT+YE+ + + FKSGIE++
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEME  519

11) CKR_2321 in NC_011837


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  550 bits (2077),  Expect = 7e-158, Method: Compositional matrix adjust.
 Identities = 328/519 (64%), Positives = 425/519 (82%), Gaps = 0/519 (0%)

Query  2    VVSRNVTVIPAIKRVGNNKNSESKPKIRVAAYCRVSTDSEEQASSYDIQIEHYTNYIKKN  61
            +  +N+ VIPA KRVG+    E   K+RVAAYCRVST++EEQ SSY++Q+ HYT++IKKN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  62   KEWELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIR  121
            +EWE+AGIFADDGI+GTNTKKR+EFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  122  QLKDKNIAVFFEKENINTMDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEIQV  181
            QLKDKNI+V+FEKENINT D+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG +QV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  182  NHKRFLGYTKDENKQLVIDPKGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKAKW  241
            NHKRF+GYTKDE+ +L I P  AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  242  RPETLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHDPIIPRDLFMQ  301
            RPE++KKILQNEKYIGDALLQKT TVDFL+KKRVKN+G VPQYYVENSH++IIP++LF+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  302  VQEEMVRRANLRGGKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVS  361
             QEE+ RR+N+  G G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  362  RLEEKGSECTASTINEEILQTAVVKAINELLANKEPFLSTLQKNIATVLNEENDNATVDI  421
            R+E+    C   T++E+ L  AV+ AIN LLA  +  + TL+ NI +V+ E  +    +I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  422  DGKleelqqqlliqAKSKNDYEDVADEIYRLRELKQNALVENAEREGKRQRIAEMTDFLN  481
            +  LEE Q++L+  A+  +DY+++ADEI  LR+ +Q  LVE+A   G  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  482  EQSCELEEYDEQLVRRLIEKVTIYEDKLTVEFKSGIEID  520
             +     EYD++LVR++I+ VT+YE+ + + FKSGIE++
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEME  519

12) EFAU004_01597 in NC_017022


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  550 bits (2077),  Expect = 8e-158, Method: Compositional matrix adjust.
 Identities = 335/516 (65%), Positives = 428/516 (83%), Gaps = 0/516 (0%)

Query  5    RNITVIPARKRVGNTAAAEQRPKLKVAAYCRVSTDSEEQASSYEVQVAHYTQFIQKNPEW  64
            +NI VIPARKRVG+TAA E+  KL+VAAYCRVST++EEQ SSYEVQV+HYT+FI+KN EW
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  65   ELAGIYADDGITGTNTKKREEFNRMIQDCMDGNIDMIITKSISRFARNTLDCLKYIRELK  124
            E+AGI+ADDGI+GTNTKKR+EFNRMI +CMDGNIDM+ITKSISRFARNTLDCL+YIR+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  125  EKNIPVFFEKENINTMDSKGEVLLTIMaslaqqesqslsqNIKLGLQYRFQNGEVRVNHS  184
            +KNI+V+FEKENINT D+KGEVLLTIMASLAQQESQSLSQN+KLGLQYR+Q+G V+VNH 
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  185  RFLGYTKDEEGNLIIEPAEAEVVKRIYREYLEGASLLQIGRGLEADGILTGAGKTKWRPE  244
            RF+GYTKDE+GNL I P EAE++KRIYREYLEG SL+ IGR+LE DGILT+AGK +WRPE
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  245  TLKKILQNEKYIGDALLQKTYTIDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304
            ++KKILQNEKYIGDALLQKT T+DFL+KKRVKN+G VPQYYVENSHE+IIP+ELF+Q QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  305  EMVRRANLRGGKGGKKRVYSSKYALSSIVYCGQCGDIYRRVHWNNRGYKSIVWRCVSRLE  364
            E+ RR+N+  G G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+R+E
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  365  EKGSECTAPTINEETLQAAVVKAINELLTKKEPFLSTLQKNIATVLneendnttddIDRK  424
            +    C   T++E+ L +AV+ AIN LL+  +  + TL+ NI +V+ E  +    +I+  
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423

Query  425  leelqqqlliqAKSKNDYEDVADEIYRLRELKQNALVENAEREGKRQRIAEMTDFLNEQS  484
            LEE Q++L+  A+  +DY+++ADEI  LR+ +Q  LVE+A   G  +RI E+ +F+  + 
Sbjct  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483

Query  485  CELEEYDEQLVRRLIEKVTVFDEKMTIEFKSGVTIE  520
                EYD++LVR++I+ VTV++    I FKSG+ +E
Sbjct  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEME  519

13) Tthe_0815 in NC_014410


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  549 bits (2071),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 317/520 (61%), Positives = 423/520 (82%), Gaps = 0/520 (0%)

Query  1    MTTRNVTVIPARKRIGNSANAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSN  60
            MT +N+ VIPARKR+G++A  E + KLRVAAYCRVST++EEQ +SYE Q+ HYT++IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIR  120
             EWE+AGIFAD+GI+GTNTKKR+EFNRMI ECM+G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHI  180
            QLK+KNI+VYFEKENINT D+KGE+LLTIMASLAQQESQSLSQNVKLG+QYRYQQGK+++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRW  240
            NH+RF+GYTKD DGNL IVPEEAEI+KRIYREYLEG S++ I+R+LE DGILT+AG+PRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQ  300
            +  +++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+E+F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEQLVKRRCVHISKNGKKRNYSNKHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCIS  360
             QE++ +R  +  +   +KR YS+K +LS + FCG+C +I+RRV WN +G+K +VWRC++
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RLENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAILKKNIETVLSEDLDESTADI  420
            R+E+    C   T+ ED L   ++ AIN  ++G N+ +  L  NI++V++E  +   ++I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  DKRLEELQTELIQLANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFFN  480
            ++ LEE Q ELI+LAN  + YD++ +EI  LRD RQ  L  +A   +  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  TQTGDITEFDDKLVRKLVEKATVYNDRLVVEFKSGLEIEI  520
             +     E+DDKLVRK+++  TVY++++V+ FKSG+E+EI
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

14) smi_1713 in NC_013853


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  548 bits (2068),  Expect = 3e-157, Method: Compositional matrix adjust.
 Identities = 330/517 (64%), Positives = 424/517 (83%), Gaps = 0/517 (0%)

Query  5    RNVTVIPAIKRVGNNKTSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64
            +N+ VIPA KRVG+  + E   K+RVAAYCRVST++EEQ SSYE+Q+ HYT++IKKN+EW
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDMIITKSISRFARNTLDCLKYIRQLK  124
            E+AGIFADDGI+GTNTKKR+EFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIRQLK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  125  DKNIAVFFEKENINTMDSKGEIMLTIMaslaqqesqslsqNVKLGIQYRYQQGEVQVNHK  184
            DKNI+V+FEKENINT D+KGE++LTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNHK
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQISRGLEADGILTAAGKAKWRPE  244
            RF+GYTKDE+ +L I PE AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++WRPE
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  245  TLKKILQNEKYIGDALLQKTYTVDFLSKKRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304
            ++KKILQNEKYIGDALLQKT TVDFL+KKRVKN+G VPQYYVENSHE+IIP+ELF+Q QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  305  EMVRRANLRGRKGGKKRVYSSKYALSSIVYCGHCGDIYRRVHWNNRGYKSIVWRCVSRLE  364
            E+ RR+N+    G +KR+YSSKYALS+I +CG+CGDIYRRV WN +G K +VWRCV+R+E
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  365  EKGSECTAPTINEETLQTAVVKAINELLANKEPFLSTLKKNIATVFNEENDNATDDIEGK  424
            +    C   T++E+ L  AV+ AIN LLA  +  + TL  NI +V+ E  +    +I+  
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423

Query  425  leelqqqlliqAKSKNDYEDVADEIYRLRELKQNALAENAEREGKRQRIAEMTDFLNEQS  484
            LEE Q++L+  A+  +DY+++ADEI  LR+ +Q  L E+A   G  +RI E+ +F+  + 
Sbjct  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483

Query  485  CELEEYDEQLVRRLIEKVTVFDDKLTVEFKSGVEIDI  521
                EYD++LVR++I+ VTV+++ + + FKSG+E++I
Sbjct  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

15) Pmob_0430 in NC_010003


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  543 bits (2051),  Expect = 8e-156, Method: Compositional matrix adjust.
 Identities = 316/520 (61%), Positives = 421/520 (81%), Gaps = 0/520 (0%)

Query  1    MTTRNVTVIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSN  60
            MT +N+ VIPARKR+G++A  E + KLRVAAYCRVST++EEQ +SYE Q+ HYT++IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIR  120
             EWE+AGIFAD+GI+GTNTKKR+EFNRMI ECM+G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHI  180
            QLK+KNI+VYFEKENINT D+KGE+LLTIMASLAQQESQSLSQNVKLG+QYRYQQGK+++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRW  240
            NH+RF+GYTKD DGNL IVPEEAEI+KRIYREYLEG S++ I+R+LE DGILT+AG+PRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVANNGIVPQYYVENSHEPIIPREIFMQ  300
            +  +++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+E+F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGKCHEIFRRVHWNNRGKKSIVWRCVS  360
             QE++ +R  +  +   +KR YS++ +LS + FCG C +I+RRV WN +G+K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RLENTGLFCTASTILEDTLKEKIVDAINVAVSGKNSFLAILKKNIETVLSEDLDESTADI  420
            R+E+    C   T+ ED L   ++ AIN  ++G N+ +  L  NI++V++E  +   ++I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  DKRLEELQTELIQKANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLN  480
            ++ LEE Q ELI+ AN  + YD++ +EI  LRD RQ  L  +A   +  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  MQTGGITEFDDKLVRKLIEKATVYNDRLVVEFKSGLEIEV  520
             +     E+DDKLVRK+I+  TVY++++V+ FKSG+E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

16) Tph_c22970 in NC_018870


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  542 bits (2045),  Expect = 3e-155, Method: Compositional matrix adjust.
 Identities = 313/520 (61%), Positives = 420/520 (81%), Gaps = 0/520 (0%)

Query  1    MTTRNVTIIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSN  60
            MT +N+ +IPARKR+G++A  E + KLRVAAYCRVST++EEQ +SYE Q+ HYT++IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIR  120
             EWE+AGIFAD+GI+GTNTKKR+EFNRMI ECM+G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHI  180
            QLK+KNI+VYFEKENINT D+KGE+LLTIMASLAQQESQSLSQNVKLG+QYRYQQGK+++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNHRW  240
            NH+RF+GYTKD DGNL IVPEEAEI+KRIYREYLEG S++ I+R+LE DGILT+AG+ RW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQ  300
            +  +++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+E+F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVS  360
             QE++ +R  +  +   +KR YS++ +LS + FCG+C +I+RRV WN +G+K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RLENTGLFCTASTILEDTLKEKIIEAINVAVSGKNSFLAILKKNIETVLSADLDESTADI  420
            R+E+    C   T+ ED L   ++ AIN  ++G N+ +  L  NI++V++   +   ++I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  DKRLEELQTELIQKANSKESYDNIVNEIYRLRDLRQETLSRNALRKDKRDRIAEMTDFLN  480
            ++ LEE Q ELI+ AN  + YD++ +EI  LRD RQ  L  +A   +  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  TQTGDITEFDDKLVRKLIEKVIVYDDRLVVEFKSGLEIEV  520
             +     E+DDKLVRK+I+ V VY++++V+ FKSG+E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

17) Ccel_2814 in NC_011898


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  541 bits (2042),  Expect = 4e-155, Method: Compositional matrix adjust.
 Identities = 326/517 (64%), Positives = 420/517 (82%), Gaps = 0/517 (0%)

Query  5    RNVTVIPAIKRVGNNKNSESKPKIRVAAYCRVSTDSEEQASSYEIQIEHYTNYIKKNKEW  64
            +N+ VIPA KRVG+    E   K+RVAAYCRVST++EEQ SSYE+Q+ HYT++IKKN+EW
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  65   ELAGIFADDGITGTNTKKREEFNRMIEECMAGKIDLIITKSISRFARNTLDCLKYIRQLK  124
            E+AGIFADDGI+GTNTKKR+EFNRMI ECM G+ID++ITKSISRFARNTLDCL+YIRQLK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  125  DKNIAVFFEKENINTMDSKGEVLLTIMaslaqqesqslsqNVKLGIQYRYQQGEVQVNHK  184
            DKNI+V+FEKENINT D+KGEVLLTIMASLAQQESQSLSQNVKLG+QYRYQQG VQVNHK
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  185  RFLGYTKDENKQLVIDPEGAEVVKRIYREYLEGASLLQIARGLEADGILTAAGKSKWRPE  244
            RF+GYTKDE+ +L I PE AE++KRIYREYLEG SL+ I+R+LE DGILTAAGK++WRPE
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  245  TLKKILQNEKYIGDALLQKTYTIDFLSKRRVKNNGIVPQYYVENSHEPIIPRELFMQVQE  304
            ++KKILQNEKYIGDALLQKT T+DFL+K+RVKN+G VPQYYVENSHE+IIP+ELF+Q QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  305  EMVRRANLRGGKGGKKRVYSSKYALSSIVYCGQCGNIYRRVHWNNRGYKSIVWRCVSRLE  364
            E+ RR+N+  G G +KR+YSSKYALS+I +CG+CG+IYRRV WN +G K +VWRCV+R+E
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  365  EKGSECTAPTINEEILQTAVVKAINELLANKEPFLSTLQKNIAAILNEGNDNATDDIDSK  424
            +    C   T++E+ L  AV+ AIN LLA  +  + TL+ NI A++ E  +    +I++ 
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423

Query  425  leelqqqlliqAKSKNDYEDVADKIYRLRELKQNALVESAEREGKRQRIAEMTDFLNEQS  484
            LEE Q++L+  A+  +DY+++AD I  LR+ +Q  LVE A   G  +RI E+ +F+  + 
Sbjct  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483

Query  485  CELEEYDEQLVRWLIEKVTIHANRVEVEFKAGISIDV  521
                EYD++LVR +I+ VT+   +  + FK+GI +++
Sbjct  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

18) Clocl_3656 in NC_016627


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  541 bits (2043),  Expect = 4e-155, Method: Compositional matrix adjust.
 Identities = 314/520 (61%), Positives = 422/520 (82%), Gaps = 0/520 (0%)

Query  1    MTNRNVTVIPARKRIGNSAKAEEMPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSN  60
            MT++N+ VIPARKR+G++A  E + KLRVAAYCRVST++EEQ +SYE Q+ HYT++IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIR  120
             EWE+AGIFAD+GI+GTNTKKR+EFNRMI ECM+G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKDKNIPVYFEKENINTLDTKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHI  180
            QLKDKNI+VYFEKENINT D+KGE+LLTIMASLAQQESQSLSQNVKLG+QYRYQQGK+++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRW  240
            NH+RF+GYTKD DGNL IVPEEAEI+KRIYREYLEG S++ I+R+LE DGILT+AG+PRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQ  300
            +  +++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+E+F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVS  360
             QE++ +R  +  +   +KR YS++ +LS + FCG+C +I+RRV WN +G+K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RLENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAILKKNIETVLSEDLDESTANI  420
            R+E+    C   T+ ED L   ++ AIN  ++G N+ +  L  NI++V++E  +   ++I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  DKRLEELQTELIQKANSKEVYNNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLD  480
            ++ LEE Q ELI+ AN  + Y+++ +EI  LRD RQ  L  +A   +  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  MQTGDITEFDDKLVRKLVEKAIVYDDRIMIEFKSGLEIEV  520
             +     E+DDKLVRK+++   VY+++++I FKSG+E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

19) Clo1313_2376 in NC_017304


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  540 bits (2038),  Expect = 9e-155, Method: Compositional matrix adjust.
 Identities = 311/520 (60%), Positives = 419/520 (81%), Gaps = 0/520 (0%)

Query  1    MTTRNVTVIPARKRIGNSANAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSN  60
            MT +N+ VIPARKR+G++A  E + KLRVAAYCRVST++EEQ +SYE Q+ HYT++IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIR  120
             EWE+AGIFAD+GI+GTNTKKR+EFNRMI ECM+G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHI  180
            QLK+KNI+VYFEKENINT D+KGE+LLTIMASLAQQESQSLSQNVKLG+QYRYQQGK+++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFLGYTKDKDGNLVIVPEEAEIVKRIYKEYLEGSSMLQIARGLEADGILTGAGNPRW  240
            NH+RF+GYTKD DGNL IVPEEAEI+KRIY+EYLEG S++ I+R+LE DGILT+AG+PRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQ  300
            +  +++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+E+F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVS  360
             QE++ +R  +  +   +KR YS++ +LS + FCG+C +I+RRV WN +G+K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RLENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAILKKNIETVLSVDLDETTADI  420
            R+E+    C   T+ ED L   ++ AIN  ++G N+ +  L  NI++V++   +   ++I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  DKRLEELQTELIQKANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLN  480
            ++ LEE Q ELI+ AN  + YD++ +EI  LRD RQ  L  +A   +  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  TQTGDITEFDDKLVRKLVEKAIAYDDRIVVEFKSGLEIEV  520
             +     E+DDKLVRK+++    Y++++V+ FKSG+E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

20) Thet_1635 in NC_014538


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  530 bits (1999),  Expect = 1e-151, Method: Compositional matrix adjust.
 Identities = 330/519 (64%), Positives = 426/519 (83%), Gaps = 0/519 (0%)

Query  3    VSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKKNS  62
              KN+M+IPA KR+G+    +   KLRVAAYCRVST+++EQ SSYEVQ+ HYTEFIKKN+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   EWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMIITKSISRFARNTLDCLHYIRK  122
            EWEFAGIFADDGISGTNTK+RDEFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKDKNIAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVMVN  182
            LKDKNI+VYFEKENINT DAKGE++LTIMASLAQQESQSLSQNVKLG QYRYQQG V VN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  CSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLEADGILTGAGKKRWH  242
              RF+GYTKDE+  L IVPEEAEI+KRIYREYLEG S+  I ++LE DGILT+AGK RW+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  TSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENSHEAIIPREIFMQV  302
              +++KIL NEKYIGDALLQKT TVDFLTKKRV N+G VPQYYVENSHEAIIP+E+F+Q 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEELVRRSKGHISTSGKKRNFSANHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCVSR  362
            QEE+ RRS+   + + +KR +S++  +S I FCG+CG+IYRRV WN +G+K +VWRCV+R
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  363  LENTGLACHSRTVQEDMIGLATVDAINKLLGQKDDFLITLKENIETVISETDNNIVSeid  422
            +E+    C +RTV+ED +  A + AINKLL+  ++ + TL ENI++VI+ET +  +SEI+
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  423  kkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFINE  482
            + LEE QK+L++LAN  +DY+++ADEI  LR+ R+  L E+A+  G ++R++++  FI  
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  483  QSILLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDI  521
            + +   EYD++LVR++I+ +TVY++ + I FKSG+E++I
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

21) Teth514_1274 in NC_010320


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  530 bits (1999),  Expect = 1e-151, Method: Compositional matrix adjust.
 Identities = 330/519 (64%), Positives = 426/519 (83%), Gaps = 0/519 (0%)

Query  3    VSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKKNS  62
              KN+M+IPA KR+G+    +   KLRVAAYCRVST+++EQ SSYEVQ+ HYTEFIKKN+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   EWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMIITKSISRFARNTLDCLHYIRK  122
            EWEFAGIFADDGISGTNTK+RDEFNRMI ECM G+IDM+ITKSISRFARNTLDCL+YIR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKDKNIAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVMVN  182
            LKDKNI+VYFEKENINT DAKGE++LTIMASLAQQESQSLSQNVKLG QYRYQQG V VN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  CSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLEADGILTGAGKKRWH  242
              RF+GYTKDE+  L IVPEEAEI+KRIYREYLEG S+  I ++LE DGILT+AGK RW+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  TSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENSHEAIIPREIFMQV  302
              +++KIL NEKYIGDALLQKT TVDFLTKKRV N+G VPQYYVENSHEAIIP+E+F+Q 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEELVRRSKGHISTSGKKRNFSANHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCVSR  362
            QEE+ RRS+   + + +KR +S++  +S I FCG+CG+IYRRV WN +G+K +VWRCV+R
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  363  LENTGLACHSRTVQEDMIGLATVDAINKLLGQKDDFLITLKENIETVISETDNNIVSeid  422
            +E+    C +RTV+ED +  A + AINKLL+  ++ + TL ENI++VI+ET +  +SEI+
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  423  kkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFINE  482
            + LEE QK+L++LAN  +DY+++ADEI  LR+ R+  L E+A+  G ++R++++  FI  
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  483  QSILLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDI  521
            + +   EYD++LVR++I+ +TVY++ + I FKSG+E++I
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

22) Tph_c23370 in NC_018870


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  529 bits (1998),  Expect = 1e-151, Method: Compositional matrix adjust.
 Identities = 308/519 (60%), Positives = 412/519 (80%), Gaps = 1/519 (0%)

Query  3    VSKNVTVIPARKHTRKSKDEEK-PKLRVAAYCRVSTDSEEQATSYDTQIEHYTAYIQGHP  61
              KN+ VIPARK+   +   EK  KLRVAAYCRVST++EEQ +SY+ Q+ HYT +I+ + 
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  62   DWMLAGIFADDGISGTNTKKREEFNRMIDECMAGNIDMIITKSISRFARNTLDCLKYIRQ  121
            +W +AGIFADDGISGTNTKKR+EFNRMI ECM GNIDM+ITKSISRFARNTLDCL+YIRQ
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  122  LKDKNIPVYFEKENINTMDSKGEVMITIMaslaqqesqslsqNVKLGLQYRYQQGEIQIN  181
            LKDKNI+VYFEKENINT D+KGEV++TIMASLAQQESQSLSQNVKLGLQYRYQQG +Q+N
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  182  CARFLGYTKDENKHLVIVPEEAEIVKRIYREYLEGASMLKIARGLEADGILNGAGNERWH  241
              RF+GYTKDE+ +L IVPEEAEI+KRIYREYLEG S++ I+R+LE DGIL +AG+ RW+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  242  TSNINHILRNEKYIGDALLQKTYTVDFLTKKRVKNNGIVPQYYVENSHEAIIPREIFMQV  301
              +++ IL+NEKYIGDALLQKT TVDFLTKKRVKN+G VPQYYVENSHEAIIP+E+F+Q 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  302  QEELIRRRIVHTSPNGKTRTFSSNHVFAQIVICGKCGEVFRRVHWNNRGKKSIVWRCVSR  361
            QEE+ RR  + T+   + R +SS+  ++ I +CG CG+++RRV WN +G+K +VWRCV+R
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  362  LENTGLFCDARTVLESTIEQVLVTAINQTLCDKDSFLTTLRDNIATVINRESDKALADID  421
            +E+    C  RTV E  +   ++TAIN+ L + ++ + TL +NI +VI   ++  +++I+
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  422  KRLEELQTELLKLATSNADYDKVGDEIHRLRDQKQKLLLENANRDELKKRMADMSTFLKK  481
            + LEE Q EL+KLA    DYD ++DEI+ LRD++Q LL+E+A+    + R+ ++  F++K
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  482  QSTALAEYDEKLVRRLIEKVSIHEDKFTVEFKSGLTVDV  520
            +     EYD+KLVR++I+ V++ E+ F + FKSG+ +++
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

23) Clocl_3697 in NC_016627


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  529 bits (1997),  Expect = 2e-151, Method: Compositional matrix adjust.
 Identities = 316/520 (61%), Positives = 421/520 (81%), Gaps = 0/520 (0%)

Query  1    MTTRNVTVIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSN  60
            MT +N+ VIPARKR+G++A  E + KLRVAAYCRVST++EEQ +SYE Q+ HYT++IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIR  120
             EWE+AGIFAD+GI+GTNTKKR+EFNRMI ECM+G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHI  180
            QLK+KNI+VYFEKENINT D+KGE+LLTIMASLAQQESQSLSQNVKLG+QYRYQQGK+++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNPRW  240
            NH+RF+GYTKD DGNL IVPEEAEI+KRIYREYLEG S++ I+R+LE DGILT+AG+PRW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQ  300
            +  +++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+E+F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEQLVKRRCVHISKNGKKRNYSNNHPLSQMVFCGKCHEVFRRVHWNNRGKKSIVWRCVS  360
             QE++ +R  +  +   +KR YS++ +LS + FCG C +++RRV WN +G+K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RLENTGLFCTASTILEDTLKEKIVEAINIAVSGKNSFLAILKKNIETVLNEDLDESTADI  420
            R+E+    C   T+ ED L   ++ AIN  ++G N+ +  L  NI++V+ E  +   ++I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  DKRleelqaeliqlaNSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLN  480
            ++ LEE Q ELI+LAN  + YD++ +EI  LRD RQ  L  +A   +  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  MQTGGITEFDDKLVRKLIEKATVYNDRLVVEFKSGLEIEV  520
             +     E+DDKLVRK+I+  TVY++++V+ FKSG+E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

24) Cthe_1671 in NC_009012


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  528 bits (1992),  Expect = 3e-151, Method: Compositional matrix adjust.
 Identities = 308/517 (60%), Positives = 411/517 (80%), Gaps = 1/517 (0%)

Query  5    KNVTVIPARKHTRKSKDEEK-PKLRVAAYCRVSTDSEEQATSYDTQIEHYTAYIQGHPDW  63
            KN+ VIPARK+   +   EK  KLRVAAYCRVST++EEQ +SY+ Q+ HYT +I+ + +W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  64   MLAGIFADDGISGTNTKKREEFNRMIDECMAGNIDMIITKSISRFARNTLDCLKYIRQLK  123
             +AGIFADDGISGTNTKKR+EFNRMI ECM GNIDM+ITKSISRFARNTLDCL+YIRQLK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  124  DKNIPVYFEKENINTMDSKGEVMLTIMaslaqqesqslsqNVKLGLQYRYQQGEIQVNCA  183
            DKNI+VYFEKENINT D+KGEV+LTIMASLAQQESQSLSQNVKLGLQYRYQQG +QVN  
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  184  RFLGYTKDENKRLVVVPEEAEIVKRIYREYLEGASMLKIARGLEADGILNGAGNERWHTS  243
            RF+GYTKDE+  L +VPEEAEI+KRIYREYLEG S++ I+R+LE DGIL +AG+ RW+  
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  244  NINNILRNEKYIGDALLQKTYTVDFLTKKRVKNNGIVPQYYVENSHEAIIPREVFMQVQE  303
            ++++IL+NEKYIGDALLQKT TVDFLTKKRVKN+G VPQYYVENSHEAIIP+E+F+Q QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  304  ELIRRRIVHTSPNGKTRTFSSNHVFAQIIICGKCGEVFRRVHWNNRGKKSIVWRCVSRLE  363
            E+ RR  + T+   + R +SS+  ++ I +CG CG+++RRV WN +G+K +VWRCV+R+E
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  364  NTGLFCDARTVLESTIEQVLVTAINQTLCDKDSFLTTLRDNIATIINRESDKALADIDKR  423
            +    C  RTV E  +   ++TAIN+ L + ++ + TL +NI ++I   ++  +++I++ 
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNS  423

Query  424  LEELQTELLKLATSNADYEKVGDEIHSLRDQKQKLQVENANRDELKKQIADMSTFLKKQS  483
            LEE Q EL+KLA    DY+ ++DEI+ LRD++Q L VE+A+    + +I ++  F++K+ 
Sbjct  424  LEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNK  483

Query  484  TALAEYDKQLVRRLIDKVTVFEDKFTVEFKSGVTVDV  520
                EYD +LVR++I+ VTV+E+ F + FKSG+ +++
Sbjct  484  FRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

25) Fnod_1612 in NC_009718


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  525 bits (1980),  Expect = 3e-150, Method: Compositional matrix adjust.
 Identities = 328/519 (64%), Positives = 421/519 (82%), Gaps = 0/519 (0%)

Query  3    VSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKKNS  62
              KN+M+IPA KR+G+    +   KLRVAAYCRVST+++EQ SSYEVQ+ HYTEFIKKN+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   EWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMVITKSISRFARNTLDCLQYIRK  122
            EWEFAGIFADDGISGTNTK+RDEFNRMI ECM G+IDMVITKSISRFARNTLDCLQYIR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKDKNVAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVMVN  182
            LKDKN++VYFEKENINT DAKGE++LTIMASLAQQESQSLSQNVKLG QYRYQQG V VN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  CSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLETDGILTGAGKKRWH  242
              RF+GYTKDE+  L IVPEEAEI+KRIYREYLEG S+  I ++LE DGILT+AGK RW+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  TSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENNHEAIIPREIFMQV  302
              +++KIL NEKYIGDALLQKT TVDFLTKKRV N+G VPQYYVEN+HEAIIP+E+F+Q 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEELVRRSRGHISTSGKKRNFSSNHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCVSR  362
            QEE+ RRS    + + +KR +SS+  +S I FCG+CG+IYRRV WN +G+K +VWRCV+R
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  363  LENTGLTCHSRTVLEDMIGIATVEAINKLIGQKDGFLTILKENIETVISETGNNVVSeid  422
            +E+    C +RTV ED +  A + AINKL++  +  +  L ENI++VI+ET +  +SEI+
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  423  kkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFLNE  482
            + LEE QK+L++LAN  +DY+++ADEI  LR+ R+  L E+A+  G ++R++++  F+  
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  483  QSTLLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDI  521
            +     EYD++LVR++I+ +TVY++ + I FKSG+E++I
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

26) Ferpe_0670 in NC_017095


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  525 bits (1980),  Expect = 3e-150, Method: Compositional matrix adjust.
 Identities = 328/519 (64%), Positives = 421/519 (82%), Gaps = 0/519 (0%)

Query  3    VSKNVMIIPAIKRMGNNRKEDETPKLRVAAYCRVSTDSDEQASSYEVQIEHYTEFIKKNS  62
              KN+M+IPA KR+G+    +   KLRVAAYCRVST+++EQ SSYEVQ+ HYTEFIKKN+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   EWEFAGIFADDGISGTNTKNRDEFNRMIDECMAGKIDMVITKSISRFARNTLDCLQYIRK  122
            EWEFAGIFADDGISGTNTK+RDEFNRMI ECM G+IDMVITKSISRFARNTLDCLQYIR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKDKNVAVYFEKENINTLDAKGEIMLTIMaslaqqesqslsqNVKLGYQYRYQQGEVMVN  182
            LKDKN++VYFEKENINT DAKGE++LTIMASLAQQESQSLSQNVKLG QYRYQQG V VN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  CSRFLGYTKDENKRLVIVPEEAEIVKRIYREYLEGSSMDKIKKGLETDGILTGAGKKRWH  242
              RF+GYTKDE+  L IVPEEAEI+KRIYREYLEG S+  I ++LE DGILT+AGK RW+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  TSTIRKILSNEKYIGDALLQKTYTVDFLTKKRVVNNGIVPQYYVENNHEAIIPREIFMQV  302
              +++KIL NEKYIGDALLQKT TVDFLTKKRV N+G VPQYYVEN+HEAIIP+E+F+Q 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEELVRRSRGHISTSGKKRNFSSNHVFSQIIFCGECGEIYRRVHWNNRGKKSIVWRCVSR  362
            QEE+ RRS    + + +KR +SS+  +S I FCG+CG+IYRRV WN +G+K +VWRCV+R
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  363  LENTGLTCHSRTVLEDMIGIATVEAINKLIGQKDGFLTILKENIETVISETGNNVVSeid  422
            +E+    C +RTV ED +  A + AINKL++  +  +  L ENI++VI+ET +  +SEI+
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  423  kkleelqkdllrlANSKEDYNDIADEIYRLREERHKALAEEAGKKGSKQRLEDMEKFLNE  482
            + LEE QK+L++LAN  +DY+++ADEI  LR+ R+  L E+A+  G ++R++++  F+  
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  483  QSTLLEEYDEQLVRRLIEKITVYDDKLTIEFKSGVEIDI  521
            +     EYD++LVR++I+ +TVY++ + I FKSG+E++I
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

27) Mahau_2800 in NC_015520


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  525 bits (1980),  Expect = 3e-150, Method: Compositional matrix adjust.
 Identities = 315/520 (61%), Positives = 420/520 (81%), Gaps = 0/520 (0%)

Query  1    MAIRNVTVIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSN  60
            M+ +N+ VIPARKR+G++A  E + KLRVAAYCRVST++EEQ +SYE Q+ HYT++IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWELAGIFADEGITGTNTKKREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIR  120
             EWE+AGIFAD+GI+GTNTKKR+EFNRMI ECM+G+IDM+ITKSISRFARNTLDCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKEKNIPVYFEKENINTLDSKGEILLTIMaslaqqesqslsqNVKLGIQYRYQQGKIHI  180
            QLK+KNI+VYFEKENINT D+KGE+LLTIMASLAQQESQSLSQNVKLG+QYRYQQGK+++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNHRW  240
            NH+RF+GYTKD DGNL IVPEEAEI+KRIYREYLEG S++ I+R+LE DGILT+AG+ RW
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVANNGIVPQYYVENSHEPIIPREIYMQ  300
            +  +++KIL+NEKYIGDALLQKT TVDFL+KKRV N+G VPQYYVENSHE+IIP+E+++Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEELVRRRCVHISKNGKKRNYSNNHPLSQMVFCGKCHEVFRRVHWNNRGKKSIVWRCVS  360
             QEE+ RR  +  +   +KR YS++ +LS + FCG C +++RRV WN +G+K +VWRCV+
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  361  RLENTGLFCTASTILEDTLKEKIVEAINIAVSGKNSFLAILKKNIETVLNEDLDESTADI  420
            R+E+    C   T+ ED L   ++ AIN  ++G N+ +  L  NI++V+ E  +   ++I
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  421  DKRleelqaeliqlaNSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLN  480
            ++ LEE Q ELI+LAN  + YD++ +EI  LRD RQ  L  +A   +  +RI E+ +F+ 
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  481  MQTGGITEFDDKLVRKLIEKATVYNDRLVVEFKSGLEIEV  520
             +     E+DDKLVRK+I+  TVY++++V+ FKSG+E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

28) SpiGrapes_2876 in NC_016633


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  525 bits (1979),  Expect = 4e-150, Method: Compositional matrix adjust.
 Identities = 295/516 (58%), Positives = 404/516 (79%), Gaps = 0/516 (0%)

Query  7    NVTVIPAKKTIGTQKTTDKVQKTRVAAYCRVSTDSDEQETSYETQIEHYTSFINSHPDWV  66
            N+ VIPA+K +G+  + +K++K RVAAYCRVST+++EQ++SYE Q+ HYT FI+ + +W 
Sbjct  5    NIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWE  64

Query  67   LAGIYADDGISGMNTKKRDEFQRMINDCNEGKIDMVITKSISRFARNTVDCLNYTRALKN  126
            +AGI+ADDGISG NTKKRDEF+RMI +C +G+IDMVITKSISRFARNT+DCL+Y R LK+
Sbjct  65   FAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKD  124

Query  127  KNIGVYFEKENINTLDAKGEVLMTIMASLAQQESESLSANVRLGLQFRYQQGKVQVNHNW  186
            KNI+VYFEKENINT DAKGEVL+TIMASLAQQES+SLS NV+LGLQ+RYQQGKVQVNH++
Sbjct  125  KNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKR  184

Query  187  FLGYTKDADGHLIIDPEQAEVVKRIYREYLSGKSFLQIKRSLEADGILNGAGNAKWHESN  246
            F+GYTKD DG+L I PE+AE++KRIYREYL G+S++ I R+LE DGIL +AG+++W+  +
Sbjct  185  FMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPES  244

Query  247  IKQILTNEKYIGDALLQKTYTVDILEKKREANKGQVPKYYVEDSHEAIIPKDIFLKVQEE  306
            +K+IL NEKYIGDALLQKT TVD+L KKR  N G+VP+YYVE+SHEAIIPK++FL+ QEE
Sbjct  245  VKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEE  304

Query  307  IARRANLTKGTTKRKRIYSGRYALSGIVFCAHCGDIFRRIKWNNRGCKSTVWRCVSRVEK  366
            I RR+N+  G  K KRIYS++YALS+I FC++CGDI+RR+ WN +G K  VWRCV+R+E+
Sbjct  305  IHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQ  364

Query  367  DGPDCTARTVHEEFLHEVVIKAINEAFREKKAILPLLRENIESSLEEVTSNQIAAIDEQM  426
            +   C  RTV E+ L   V+ AIN  +   + ++  L ENI++ + E T  QI+ I++ +
Sbjct  365  GPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNSL  424

Query  427  KSMQQELLATVNSKNTGDELGMEIRRLRDEKQALQNEQASRQDLRTRLDEMMRFLNDLPC  486
               Q+EL+   N  +  D+L+ EI  LRD +Q L  E+AS  +   R++E++ F+     
Sbjct  425  EEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNKF  484

Query  487  ELTEYEEDYVRTLLEKITVYDDYFIVEFKSGIEIQI  522
               EY++  VR +++ +TVY++ F++ FKSGIE++I
Sbjct  485  RTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

29) LRC_05140 in NC_015975


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  513 bits (1935),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 304/518 (59%), Positives = 412/518 (80%), Gaps = 2/518 (0%)

Query  3    KVTFIPARRQVGNNIKKQEKPKLRVAAYCRVSTDSDEQETSYETQVSHYKEYIQKNPEWQ  62
            ++  IPAR++VG+   K+   KLRVAAYCRVST+++EQ++SYE QVSHY E+I+KN EW+
Sbjct  5    NIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWE  64

Query  63   LAGVFADDGISGTNTKKRDEFNRMINECMAGNIDMIITKSISRFARNTLDCLKYVRQLKN  122
            +AG+FADDGISGTNTKKRDEFNRMI ECM GNIDM+ITKSISRFARNTLDCL+Y+RQLK+
Sbjct  65   FAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKD  124

Query  123  KNIPIYFEKESINTMDAKGEVLITIMaslaqqesqslsqNVKLGLQYRYQQGKVMVNHNH  182
            KNI++YFEKE+INT DAKGEVL+TIMASLAQQESQSLSQNVKLGLQYRYQQGKV VNH++
Sbjct  125  KNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKR  184

Query  183  FLGYTKDENGNLVIDPVQAEVVKRIYREYLEGYSMKKICQHLEADGALTGAGNTKWYDST  242
            F+GYTKDE+GNL I P +AE++KRIYREYLEG S+  I + LE DG LT+AG+ +W   +
Sbjct  185  FMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPES  244

Query  243  INKILRNEKYMGDALLQKTYTTDFLTKKRVKNTGIVPQYYVENNHEAIIPKDIFMQVQAE  302
            ++KIL+NEKY+GDALLQKT T DFLTKKRVKN G VPQYYVEN+HEAIIPK++F+Q Q E
Sbjct  245  VKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEE  304

Query  303  LARRRNVRTGKSGKKRCFSGNNCFSQIVCCGHCGELYRRIHWNNHGKKSIVWRCISRLEP  362
            + RR N+ TG + +KR +S++  +S I  CG+CG++YRR+ WN HG+K +VWRC++R+E 
Sbjct  305  IHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQ  364

Query  363  SFAKENCTNRTVHEETLKEISLKAINQICNDSDSFINQIQENVAKAIVNADSLSPEVIDK  422
              + E C NRTV E+ L    + AIN++  ++++ I+ ++EN+   I ++       I++
Sbjct  365  --GPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINN  422

Query  423  RLEELQKELIHKVNNKQEYDAIADEIFRLRDQKQQSLMDAETQKKNLRRVKDIQDFIKDQ  482
             LEE QKELI   N+ Q+YD +ADEI  LRD++Q  L++  +   +  R++++ +FI+ +
Sbjct  423  SLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKN  482

Query  483  STEITEFDESLVRRLVESITVFNDHFTVEFKSGIKVDI  520
                 E+D+ LVR++++S+TV+++HF + FKSGI ++I
Sbjct  483  KFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

30) HM1_2980 in NC_010337


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  513 bits (1937),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 307/519 (60%), Positives = 413/519 (80%), Gaps = 1/519 (0%)

Query  3    VSKNVTVIPARKHIRKSKDEEK-PKLRVAAYCRVSTDSDEQATSYETQIEHYTAYINGHP  61
              KN+ VIPARK++  +   EK  KLRVAAYCRVST+++EQ +SYE Q+ HYT +I+ + 
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  62   DWVLAGIFADDGISGTNTKKRDEFNRMIDECMAGNIDMVITKSISRFARNTLDCLKYIRQ  121
            +W +AGIFADDGISGTNTKKRDEFNRMI ECM GNIDMVITKSISRFARNTLDCL+YIRQ
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  122  LKEKNIPVYFEKENINTMDSKGEVLLTIMaslaqqesqslsqNVKLGLQYRYQQGEIQVN  181
            LK+KNI+VYFEKENINT D+KGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQG +QVN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  182  CARFLGYTKDENKHLVVVPEEAEVVKRIYREYLEGASMLKIARGLEADGILNGAGKERWH  241
              RF+GYTKDE+ +L +VPEEAE++KRIYREYLEG S++ I+R+LE DGIL +AGK RW+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  242  TSNINQILRNEKYIGDALLQKTYTVDFLTKKRVKNNGLVPQYYVENSHEAIIPREIFMQV  301
              ++++IL+NEKYIGDALLQKT TVDFLTKKRVKN+G VPQYYVENSHEAIIP+E+F+Q 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  302  QEELVRRRLIHKSPNGKNRVFSSSHCLANIVYCGVCGEFYRRIHWYNRGKKSIVWRCISR  361
            QEE+ RR  I  +   ++R++SS   L+ I +CG CG++YRR+ W  +G+K +VWRC++R
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  362  LENTGLFCDARTVPESQIEQVLVKAINQTLCDRDTFLTTLQNNIETVLSHGNDQVLADID  421
            +E+    C  RTV E ++   ++ AIN+ L + +  + TL++NI++V+++  +  +++I+
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  422  KRlkelqaellklaTSNADYEKVGNEIYHLREEKQKLQLESAGRDEQKKRISDMGTFLRE  481
            + L E Q EL+KLA    DY+ +++EI +LR+ +Q L +E A+   ++ RI+++  F+R 
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  482  QPTALTEYDESLIRRLIEKVTVYEDKFTVEFKSGVNVEI  520
            +     EYD+ L+R++I+ VTVYE+ F + FKSG+++EI
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

31) SCI_1214 in NC_022238


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  508 bits (1917),  Expect = 3e-145, Method: Compositional matrix adjust.
 Identities = 291/520 (56%), Positives = 414/520 (80%), Gaps = 2/520 (0%)

Query  2    NENVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNK  61
            + N+ +IPAR R G+  +++  K KLRVAAYCRVST+++EQ +SY+VQV HYTE+I +N+
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  62   EWELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRK  121
            EWE+AGI+ADDGISGTN KKR+ F  MI +CM+G++DM+ITKSISRFARNT+DCL+Y+R+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  122  LKEKNIAIIFEKENINTLEASGELLLTIMaslaqqesaslsqNIKLGLQFRYQEGKVQPN  181
            LK+KNI++ FEKENINT +A GE+LLTIMASLAQQES SLSQN+KLGLQ+RYQ+GKVQ N
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  182  HEHFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWH  241
            H +F+GYTKDEDG+L +  +EA I++RI+REYLEG S+ +I+ +LEKD I T++ + +W+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  242  LSTIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLV  301
              +++ IL+NEKY+GDALLQKT+T DF+ K R+KN+G VPQYYV +S+E+II++++F+  
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  302  QEEMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCT  361
            QEE+ RR+N+ +G +GK+KR+YSSKYALS+I  C  CGDIYRR+ WN +G+K  VWRC T
Sbjct  302  QEEIHRRSNIYTG-EGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  362  RVEHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKL  421
            R+E+GP  C+  T++E EL +A + AINK+L  ++ M++ L +NI+  I++    ++  +
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  422  NGILKGKQKELVKLAHAKKDYTALADEIDILRDKKKELQVQRAETEGVKKRIEELTDFLK  481
            N  L  KQKEL+KLA+  +DY  LADEID LRDK++ L V+ A   G + RI+EL +F++
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  482  GENHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEV  521
             ++ + +EYD+ +VRK I+ + VYE+ F I FK+ +E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

32) SCRE_1155 in NC_022236


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  508 bits (1917),  Expect = 3e-145, Method: Compositional matrix adjust.
 Identities = 291/520 (56%), Positives = 414/520 (80%), Gaps = 2/520 (0%)

Query  2    NENVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNK  61
            + N+ +IPAR R G+  +++  K KLRVAAYCRVST+++EQ +SY+VQV HYTE+I +N+
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  62   EWELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRK  121
            EWE+AGI+ADDGISGTN KKR+ F  MI +CM+G++DM+ITKSISRFARNT+DCL+Y+R+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  122  LKEKNIAIIFEKENINTLEASGELLLTIMaslaqqesaslsqNIKLGLQFRYQEGKVQPN  181
            LK+KNI++ FEKENINT +A GE+LLTIMASLAQQES SLSQN+KLGLQ+RYQ+GKVQ N
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  182  HEHFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWH  241
            H +F+GYTKDEDG+L +  +EA I++RI+REYLEG S+ +I+ +LEKD I T++ + +W+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  242  LSTIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLV  301
              +++ IL+NEKY+GDALLQKT+T DF+ K R+KN+G VPQYYV +S+E+II++++F+  
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  302  QEEMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCT  361
            QEE+ RR+N+ +G +GK+KR+YSSKYALS+I  C  CGDIYRR+ WN +G+K  VWRC T
Sbjct  302  QEEIHRRSNIYTG-EGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  362  RVEHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKL  421
            R+E+GP  C+  T++E EL +A + AINK+L  ++ M++ L +NI+  I++    ++  +
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  422  NGILKGKQKELVKLAHAKKDYTALADEIDILRDKKKELQVQRAETEGVKKRIEELTDFLK  481
            N  L  KQKEL+KLA+  +DY  LADEID LRDK++ L V+ A   G + RI+EL +F++
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  482  GENHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEV  521
             ++ + +EYD+ +VRK I+ + VYE+ F I FK+ +E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

33) SCR2_1155 in NC_022245


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  508 bits (1917),  Expect = 3e-145, Method: Compositional matrix adjust.
 Identities = 291/520 (56%), Positives = 414/520 (80%), Gaps = 2/520 (0%)

Query  2    NENVTLIPARIRAGNRITRQENKPKLRVAAYCRVSTDSDEQAGSYDVQVKHYTEYIGRNK  61
            + N+ +IPAR R G+  +++  K KLRVAAYCRVST+++EQ +SY+VQV HYTE+I +N+
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  62   EWELAGIYADDGISGTNIKKREGFIEMIDDCMEGKVDMIITKSISRFARNTIDCLKYVRK  121
            EWE+AGI+ADDGISGTN KKR+ F  MI +CM+G++DM+ITKSISRFARNT+DCL+Y+R+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  122  LKEKNIAIIFEKENINTLEASGELLLTIMaslaqqesaslsqNIKLGLQFRYQEGKVQPN  181
            LK+KNI++ FEKENINT +A GE+LLTIMASLAQQES SLSQN+KLGLQ+RYQ+GKVQ N
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  182  HEHFLGYTKDEDGKLIVDENEAKIVRRIFREYLEGASFRDIANGLEKDKIRTGGKRYKWH  241
            H +F+GYTKDEDG+L +  +EA I++RI+REYLEG S+ +I+ +LEKD I T++ + +W+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  242  LSTIRGILRNEKYMGDALLQKTITTDFIEKIRIKNDGTVPQYYVKDSQEPIIARDIFMLV  301
              +++ IL+NEKY+GDALLQKT+T DF+ K R+KN+G VPQYYV +S+E+II++++F+  
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  302  QEEMIRRANLTSGVDGKKKRVYSSKYALSSICTCTKCGDIYRRIAWNNRGKKSTVWRCCT  361
            QEE+ RR+N+ +G +GK+KR+YSSKYALS+I  C  CGDIYRR+ WN +G+K  VWRC T
Sbjct  302  QEEIHRRSNIYTG-EGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  362  RVEHGPSACNALTIQESELQDATVKAINKILICSDRMLQILSDNIEMAIADDNSVEMEKL  421
            R+E+GP  C+  T++E EL +A + AINK+L  ++ M++ L +NI+  I++    ++  +
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  422  NGILKGKQKELVKLAHAKKDYTALADEIDILRDKKKELQVQRAETEGVKKRIEELTDFLK  481
            N  L  KQKEL+KLA+  +DY  LADEID LRDK++ L V+ A   G + RI+EL +F++
Sbjct  421  NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  482  GENHQLIEYDECMVRKYIEEIKVYEDKFTICFKAKVEIEV  521
             ++ + +EYD+ +VRK I+ + VYE+ F I FK+ +E+E+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

34) MELS_2017 in NC_015873


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  497 bits (1873),  Expect = 1e-141, Method: Compositional matrix adjust.
 Identities = 301/519 (58%), Positives = 414/519 (80%), Gaps = 2/519 (0%)

Query  2    KKVMIIPARKRMGNIEKEPEQKKLRVAAYCRVSTDSDEQETSYETQVSHYKEFISSHPDW  61
            K++M+IPARKR+G+       KKLRVAAYCRVST+++EQ++SYE QVSHY EFI  + +W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  62   VLAGIFADDGISGTNTKKRNEFNRMIQECMAGNIDMIITKSISRFARNTLDCLKYIRQLK  121
             +AGIFADDGISGTNTKKR+EFNRMI ECM GNIDM+ITKSISRFARNTLDCL+YIRQLK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  122  EKNIPVLFEKESINTMDAKGEVLITIMaslaqqeseslsqNVKLGLQYRYQQGKVQVNHK  181
            +KNI+V FEKE+INT DAKGEVL+TIMASLAQQES+SLSQNVKLGLQYRYQQGKVQVNHK
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  182  HFLGYTKDENGHLIIDPEQAEVVKRIYREYLEGYSMKKIGKHLEADGILTGAGRKKWHDS  241
            +F+GYTKDE+G+L I PE+AE++KRIYREYLEG S+  IG+ LE DGILT+AG+ +W+  
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  242  TINKILRNEKYMGDALLQKTYTVDFLTKKRVKNNGFVPQYYVENDHEAIIPKDIFLQVQA  301
            +++KIL+NEKY+GDALLQKT TVDFLTKKRVKN+G VPQYYVEN HEAIIPK++FLQ Q 
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  302  ELVRRRIVHISPSGQRHSFSSNNCFAQITYCGVCGELYRRVHWNNRGHKSIVWRCISRLD  361
            E+ RR  +  + + +++ +SS+  ++ IT+CG CG++YRRV WN +G+K +VWRC++R++
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  362  PRGAEINCTNRTVNENLLKEITMKAMNHILSDSHTFLLQMQKNITKTIIKNDTLSPECIQ  421
             +G+E+ C NRTV+E+ L    M A+N +L++++  +  ++ NI   I          I+
Sbjct  364  -QGPEV-CKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  422  KRLDELQQELIQHATNRQNYNAIANEIFRLREQQEEAEQNNLSQQANIKRLEDLKKFIRE  481
            + L+E Q+ELI+ A + Q+Y+ +A+EI  LR++++    ++ S  ++  R+++L  FIR 
Sbjct  422  NSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRK  481

Query  482  HPTQITEFNeitirkiiekitiFPDHFLVKFKSGIEVTV  520
            +  +  E+++  +RKII+ +T++ +HF++ FKSGIE+ +
Sbjct  482  NKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

35) M643_03560 in NC_021826


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  461 bits (1737),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 283/521 (55%), Positives = 400/521 (77%), Gaps = 8/521 (1%)

Query  1    MAGKKVTVIPMKPRQWAAENTEEKPKLKVAAYCRVSTEMEEQASSYEAQVQHYTDYIQRN  60
            M+ K++ VIP + R  ++   E   KL+VAAYCRVSTE EEQ SSYE QV HYT++I++N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PDWELAGIFADEGISGTGTKKRDGFNRMIEACQKGDVEYIITKSISRFARNTVDCLQYIR  120
             +WE+AGIFAD+GISGT TKKRD FNRMI  C  G+++ +ITKSISRFARNT+DCLQYIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKDLHIAVFFEKENINTMDAKGEVLLTIMaslaqqesqslsqNTKMGVQYRFQQGQLRI  180
            QLKD +I+V+FEKENINT DAKGEVLLTIMASLAQQESQSLSQN K+G+QYR+QQG++++
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHNHFLGYTKDEDGNLVIEPKEAEVIKRIFREYLEGSSLQEIANGLMSDGILTGGKRKLW  240
            NH++F+GYTKDEDGNL I P EAE+IKRI+REYLEG SL  I+ +L  DGILT++ +  W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  RGEGVRLILRNEKYMGDALLQKTYTTDFLTKKRVKNDGSYAQQYYVENSHPAIIPRDIFM  300
            R E+V+ IL+NEKY+GDALLQKT T DFLTKKRVKN+G    QYYVENSH AIIP+++F+
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGH-VPQYYVENSHEAIIPKELFL  299

Query  301  QVQQELDRRKSM---KNKHSQCFSGKYALSGITVCGDCGNAYRRVHWKNRGT---VWRCK  354
            Q Q+E++RR ++     K+ + +S+KYALS+IT CGDCG+ YRRV W+ +G    VWRC 
Sbjct  300  QAQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCV  359

Query  355  SRVDKREHNCSGRTIYEKDLHEAIIKAINETVVDREDFLQQLSENINSVLTDGLTGRlee  414
            +R+++  + C  RT+ E +L  A++ AIN  + + ++ ++ L ENI++V+ +    ++ E
Sbjct  360  TRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISE  419

Query  415  ldsklkeleseIISMAIGGQGYDELASQIFSLRDERDAVAKQIAANTNLQQRVDEMVVFV  474
            +++ L E + E+I +A  GQ+YD+LA +I  LRD R+ +  + A+ +  ++R++E++ F+
Sbjct  420  INNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFI  479

Query  475  KEHDVIN-EYSEVLVRRLIEKVTIFEKNIVVDFKSGVRVTV  514
            + +     EY + LVR++I+ VT++E ++V+ FKSG+ + +
Sbjct  480  RKNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520

36) LMOSLCC2755_1716 in NC_018587


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  452 bits (1702),  Expect = 3e-128, Method: Compositional matrix adjust.
 Identities = 277/505 (55%), Positives = 390/505 (78%), Gaps = 8/505 (1%)

Query  7    AAENTEEKPKLKVAAYCRVSTEMEEQASSYEAQVQHYTDYIQRNPDWELAGIFADEGISG  66
            ++   E   KL+VAAYCRVSTE EEQ SSYE QV HYT++I++N +WE+AGIFAD+GISG
Sbjct  17   STAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISG  76

Query  67   TGTKKRDGFNRMIEACQKGDVEYIITKSISRFARNTVDCLQYIRQLKDLHIAVFFEKENI  126
            T TKKRD FNRMI  C  G+++ +ITKSISRFARNT+DCLQYIRQLKD +I+V+FEKENI
Sbjct  77   TNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENI  136

Query  127  NTMDAKGEVLLTIMaslaqqesqslsqNTKMGVQYRFQQGQLRINHNHFLGYTKDEDGNL  186
            NT DAKGEVLLTIMASLAQQESQSLSQN K+G+QYR+QQG++++NH++F+GYTKDEDGNL
Sbjct  137  NTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNL  196

Query  187  VIEPKEAEVIKRIFREYLEGSSLQEIANGLMSDGILTGGKRKLWRGEGVRLILRNEKYMG  246
             I P EAE+IKRI+REYLEG SL  I+ +L  DGILT++ +  WR E+V+ IL+NEKY+G
Sbjct  197  TIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIG  256

Query  247  DALLQKTYTTDFLTKKRVKNDGSYAQQYYVENSHPAIIPRDIFMQVQQELDRRKSM---K  303
            DALLQKT T DFLTKKRVKN+G    QYYVENSH AIIP+++F+Q Q+E++RR ++    
Sbjct  257  DALLQKTVTVDFLTKKRVKNEGH-VPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGE  315

Query  304  NKHSQCFSGKYALSGITVCGDCGNAYRRVHWKNRGT---VWRCKSRVDKREHNCSGRTIY  360
             K+ + +S+KYALS+IT CGDCG+ YRRV W+ +G    VWRC +R+++  + C  RT+ 
Sbjct  316  GKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKNRTVK  375

Query  361  EKDLHEAIIKAINETVVDREDFLQQLSENINSVLTDGLTGRleeldsklkeleseIISMA  420
            E +L  A++ AIN  + + ++ ++ L ENI++V+ +    ++ E+++ L E + E+I +A
Sbjct  376  EDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNSLEEKQKELIKLA  435

Query  421  IGGQGYDELASQIFSLRDERDAVAKQIAANTNLQQRVDEMVVFVKEHDVIN-EYSEVLVR  479
              GQ+YD+LA +I  LRD R+ +  + A+ +  ++R++E++ F++ +     EY + LVR
Sbjct  436  NKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNKFRTLEYDDKLVR  495

Query  480  RLIEKVTIFEKNIVVDFKSGVRVTV  504
            ++I+ VT++E ++V+ FKSG+ + +
Sbjct  496  KIIQSVTVYEGHFVIAFKSGIEMEI  520

37) HM1_0629 in NC_010337


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  434 bits (1635),  Expect = 5e-123, Method: Compositional matrix adjust.
 Identities = 254/433 (59%), Positives = 342/433 (79%), Gaps = 0/433 (0%)

Query  1    MIEECMAGKIDMVITKSISRFARNTLNCLKYIRQLKDKGIPVFFEKENINTMDSKGEVML  60
            MI ECM G+IDMVITKSISRFARNTL+CL+YIRQLKDK I+V+FEKENINT D+KGEV+L
Sbjct  88   MIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLL  147

Query  61   TIMaslaqqeseslsqNVKLGIQYRYQQGEIQVNHTRFLGYTKDANKQLVVVPEEAEIVK  120
            TIMASLAQQES+SLSQNVKLG+QYRYQQG +QVNH RF+GYTKD + +L +VPEEAEI+K
Sbjct  148  TIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIK  207

Query  121  RIFREFLEGSSLLQIGKGLEADGILTAAGKPKWRPETIRKILKNEKYMEDAPLQKTYTVD  180
            RI+RE+LEG SL+ IG++LE DGILTAAGKP+WRPE+++KIL+NEKY+ DA LQKT TVD
Sbjct  208  RIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVD  267

Query  181  CLTKKRVINNGIVPQYYVENSHEAIIPREIYMQVQEELARRAKPFTDVGGKMRCYSCKYA  240
             LTKKRV N+G VPQYYVENSHEAIIP+E+++Q QEE+ RR++ +T+ G + R YS KYA
Sbjct  268  FLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKRIYSSKYA  327

Query  241  LSSIVFCGDCGELYRRITWYYGNRPTVVWRCVRKIECRTPECHSQSVKEADLKRGVVKAI  300
            LS+I FCGDCG++YRR+ W    R   VWRCV +IE     C +++VKE +L  +V+ AI
Sbjct  328  LSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKNRTVKEDELYGAVMTAI  387

Query  301  NKLVLGKEEFISAMRKNVEAVIGGGAGQGVDEIEEKLAQLQDELVRLASGGQNYEAVVEE  360
            NKL+ G ++ I ++  N++AVIG  +   + EI++ L + Q EL++LA+ GQ+Y+ + +E
Sbjct  388  NKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNSLEEKQKELIKLANKGQDYDHLADE  447

Query  361  IYRLREIKGKILSGSADIHGKRRSVAEMEEFLNSQSGIFFEFDDKLVRRIVNRVTVYDGR  420
            I  LR+ +  +L   A + G    + E+ EF+  +    +E+DDKLVR+I++ VTVY+G+
Sbjct  448  IDELRDKRQILLVEDASLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGH  507

Query  421  LTVEFKTGTEVNV  433
            + + FK+G E+++
Sbjct  508  FVIAFKSGIEMEI  520

38) HMPREF0538_20498 in NC_015697


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  429 bits (1617),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 268/518 (52%), Positives = 385/518 (75%), Gaps = 9/518 (1%)

Query  3    KVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVIHYKELIQKE  62
            ++ +IPA+++ G++   +K +    +LRVAAYCRVST+ +EQ SSYE QV HY E+I+K+
Sbjct  5    NIMVIPARKRVGSTAAKEKIK----KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  63   PTWKFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIR  122
              W FAGI+ADDGISGTNTKKR++FN+MIA C  G+ID+++TKSISRFARNT+DCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  123  DLKAINVAIFFEKENINTMDAKGEVLITIMaslaqqeseslsqNVKMGIQYRYQQGKVFV  182
            +LK  N++++FEKENINT DAKGEVL+TIMASLAQQES+SLSQNVK+G+QYRYQQGKV V
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  183  NHNHFLGYTKDAQGNLVIEPAEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTKNW  242
            NH++F+GYTKD +GNL I P EA +IKRI+  YL+G S+  I+ +L  DGILT++    W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  243  RSSSVAKILKNEKYMGDALLQKTYTVDFLNKKRVKNEGIMPQYYVENDHPAIIPKSVFMQ  302
            R+ SV KIL+NEKY+GDALLQKT TVDFL KKRVKNEG +PQYYVEN H AIIPK +F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  303  VQQLIKQRRNGITTKNGKHRRL-NGKYCFSQIVFCGKCGDIFQRNMW-YRPEKVAVWRCA  360
             Q+ I +RR+ I T +GK++R+ ++KY +S I FCG CGDI++R  W  +  K  VWRC 
Sbjct  301  AQEEI-HRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCV  359

Query  361  SRVRRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELASKQIKANIMQVIKDSQGPTL  420
            +R+ ++     C  R VKE  L  A + A+N+L+ G +   K +  NI  VI ++    +
Sbjct  360  TRIEQGPEV--CKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQI  417

Query  421  DQLDKQLEEVQMKLIQAANQHQDCNALTQQIMDLRKQKEKVQSRETNQQVKLHSLEEINE  480
             ++++ LEE Q  LI+ AN+ QD + L+++I +LR +++ +   +++     + ++E+ E
Sbjct  418  SEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIE  477

Query  481  LVEFHKYGLVDFDEGLVRRLIEKITIYQRYMEFTFKDG  518
            ++  +K+  +++D+ LVR++I+ +T+Y+    ++FK G
Sbjct  478  FIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSG  515

39) LJP_1443 in NC_017477


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  428 bits (1612),  Expect = 4e-121, Method: Compositional matrix adjust.
 Identities = 267/518 (52%), Positives = 387/518 (75%), Gaps = 9/518 (1%)

Query  3    KVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVAHYKELIQKE  62
            ++ +IPA+++ G++   +K +    +LRVAAYCRVST+ +EQ SSYE QV+HY E+I+K+
Sbjct  5    NIMVIPARKRVGSTAAKEKIK----KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  63   PTWEFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIR  122
              WEFAGI+ADDGISGTNTKKR++FN+MIA C  G+ID+++TKSISRFARNT+DCL+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  123  DLKAINVAIFFEKENINTMDAKGEVLITIMaslaqqeseslsqNVKMGIQYRYQQGKVFV  182
            +LK  N++++FEKENINT DAKGEVL+TIMASLAQQES+SLSQNVK+G+QYRYQQGKV V
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  183  NHNHFLGYTKDDQGNLVIEPEEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTKNW  242
            NH++F+GYTKD++GNL I PEEA +IKRI+  YL+G S+  I+ +L  DGILT++    W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  243  QSSGVSKILKNEKYMGDALLQKTYTIDFLSKKRVKNNGIMPQYYVENDHPAIIPKPVFMQ  302
            ++ +V KIL+NEKY+GDALLQKT T+DFL+KKRVKN+G +PQYYVEN H AIIPK +F+Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  303  VQQLIKQRQNGITTKNGKHRRL-NGKYCFSQIVFCGKCGDIFQRNMW-YRPEKVAVWRCA  360
             Q+ I +R++ I T +GK++R+ ++KY +S I FCG CGDI++R  W  +  K  VWRC 
Sbjct  301  AQEEI-HRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCV  359

Query  361  SRIKRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELAGKQIKANIMKVIKNSKGPTL  420
            +RI ++     C  R VKE  L  A + A+N+L+ G +   K +  NI  VI ++    +
Sbjct  360  TRIEQGPEV--CKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQI  417

Query  421  DQLDKQLEEAQMQLIQAANQHQNCDVLTQQIMDLRKQRAKVQSREAKQQAKLHSIDEINK  480
             ++++ LEE Q +LI+ AN+ Q+ D L+++I +LR +R  +   +A   +  + I+E+  
Sbjct  418  SEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIE  477

Query  481  LIEFHKYGLVDFDEGLVRRLVEKITIFKRYMEFKFKDG  518
            +I  +K+  +++D+ LVR++++ +T++     + FK G
Sbjct  478  FIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSG  515

40) Ccel_2729 in NC_011898


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  421 bits (1584),  Expect = 7e-119, Method: Compositional matrix adjust.
 Identities = 240/412 (59%), Positives = 317/412 (77%), Gaps = 3/412 (0%)

Query  6    RTVSVIPADPTYNIHSRTEEIK-LRVAAYCRVSTELEEQQSSYQAQVDHYTRAIQTNPKW  64
            + + VIPA       +  E IK LRVAAYCRVSTE EEQ+SSY+ QV HYT  I+ N  W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  65   IFAGIYADEGISGTNTKKRVEFNRMIEDCMAGRIDMIITKSISRFARNTLDCISYIRQLR  124
             FAGI+AD+GISGTNTKKR EFNRMI +CM G IDM+ITKSISRFARNTLDC+ YIRQL+
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  125  EKNIAVYFEKENINTLDGAGELLITILGSLAQEESRSLSTNTRWGVVHRFQQGKIYVNHN  184
            +KNI+VYFEKENINT D+ GE+L+TI++SLAQ+ES+SLS N + G+  R+QQGK+ VNH+
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  185  KFLGYTKNENGDLVIVPEEAALVKRIFRQYLEGESIINIKKGLEEEGITTVTGRQKWSTS  244
            +F+GYTK+E+G+L IVPEEA ++KRI+R+YLEG+S++ I ++LE +GI T +G+ +W   
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  245  VIDKMLSNEKYMGDALLQKTYTVDYLTKKRVKNNGIVPQYYVEDSHEAIIPKPLFYRVQE  304
             + K+L NEKY+GDALLQKT TVD+LTKKRVKN+G VPQYYVE+SHEAIIPK LF + QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  305  EKARRAELHKGKAGTSK-YSSQFALTEILICAECGSHYRRTTWAKNGKKKIVWRCINRLE  363
            E  RR+++  G +   + YSS++AL+ I +C++CG  YRR  W  +G+K +VWRC+ R+E
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  364  HGTKVCQYSPTLKEENIEMAVMEVINSVIYGHRGFADTLKGNILTAIKENTE  415
            +G  VC+ + T+KE+++  AVM  IN ++ G      TL  NI + I E TE
Sbjct  364  QGPEVCK-NRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTE  414

41) HMPREF0538_20542 in NC_015697


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  409 bits (1538),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 249/520 (48%), Positives = 374/520 (72%), Gaps = 10/520 (1%)

Query  3    KVRIIPAQVKQGNRNRQIEESEAKLKVAAYCRVSTLYEDQASSYETQVAHYKEFITKNPK  62
            ++ +IPA+ + G+      E   KL+VAAYCRVST  E+Q SSYE QV+HY EFI KN  
Sbjct  5    NIMVIPARKRVGSTA--AKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  63   WELAGIYADDGISGTDTKKRNQFNQMIDDAKQGKIDLIVTKSISRFARNTIDCLQYIREL  122
            WE+AGI+ADDGISGT+TKKR++FN+MI +  +G+ID+++TKSISRFARNT+DCLQYIR+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  123  KELHVAVFFEKENINTMDAKGEVLITIMASLAQQESESISRNIKIGLQYRYQRGQVIVNT  182
            K+ +++V+FEKENINT DAKGEVL+TIMASLAQQES+S+S+N+K+GLQYRYQ+G+V VN 
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  183  ARFLGYDKDDDGNLVINPEQAKVVKRIFYECLTGKSAIEIARELTKEGIKNGIGRTQWHS  242
             RF+GY KD+DGNL I PE+A ++KRI+ E L G+S + I+R L K+GI  + G+ +W++
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  243  SGIIKILRNEKYIGDALLQKTYTVDFLTKKRVKNDGQVPQYYVENNHPAIISRAVFYQVQ  302
             ++ KIL+NEKYIGDALLQKT TVDFLTKKRVKN+G+VPQYYVEN+H AII++ +F Q Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  303  KLLDMRREGFTTEgghhhgYTNAYCFSSIVYCGRCKDIYTRCVW-YRPRIGEVEKVNVWR  361
              ++ R + +T EG + + Y++ Y +S+I +CG C DIY R  W  + R     K  VWR
Sbjct  303  EEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-----KEFVWR  357

Query  362  CYSRLHWNHKGKRCMGRTITEADLEEASLKAMNELIQQHQLADKQIAANILKVTKGTTGP  421
            C +R+  ++    C  RT+ E +L  A + A+N L+   +   K +  NI  V   TT  
Sbjct  358  CVTRI--EQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEY  415

Query  422  SldeldqqledqqllllNMSTHNKNVEQLTEQVQALRKQREQLIQQEIDHDIKRSNLKNI  481
             + E+++ LE++Q  L++++   ++ ++L+++++ LR +R+ L+ ++         ++++
Sbjct  416  QISEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINEL  475

Query  482  QSFFQTYQGGLTKFDEKLVRLLIEKITIFKSKIDFTFKDG  521
              F++  +     +D+KLVR +I+ +T++ + + ++FK G
Sbjct  476  IEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSG  515

42) Dtox_1526 in NC_013216


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  406 bits (1529),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 248/523 (48%), Positives = 376/523 (72%), Gaps = 24/523 (4%)

Query  23   SIKPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSATN  82
            + K ++K LRVAAYCRVST  E+Q++SYE QVS YTE IK N +W +AGI+ADDG S+TN
Sbjct  19   AAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTN  78

Query  83   TKKREDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNIAVFFEKEGVNT  142
            TKKR++FN MI +CM G+IDMVITKS+SRFARNT+D LQ IR+LK+KNI+V+FEKE +NT
Sbjct  79   TKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINT  138

Query  143  LEGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGVVSVNHNKFLGYTKDKNGELVI  202
             ++ GE+L+TI++S AQ+ES++LS+N + GL  R+++G V VNH++F+GYTKD +G+L I
Sbjct  139  TDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTI  198

Query  203  VPEEAELVRRIFRLYLEGSSSIQIAKILESEGVLTVTGKSKWCSTVIDKMLLNEKYMGDV  262
            VPEEAE+++RI+R YLEG S + I++ LE +G+LT +GK++W +  + K+L NEKY+GD 
Sbjct  199  VPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDA  258

Query  263  LQQKTYTIDFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLCKQAMSR  322
            L QKT T+DFLTKKRVKN G VPQYY+E+ HEAIIPKEL+ Q QEE  RR+++       
Sbjct  259  LLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTG----  314

Query  323  KAKRDEKEKSRYSSKFALSDIMVCRECGQPYRRQVWSKYGQKNAVWRCENRLKNGTKNCK  382
                + K+K  YSSK+ALS I  C +CG+ YRR  W+  G+K+ VWRC  R+ +G   CK
Sbjct  315  ----EGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCK  370

Query  383  HSPTYKEVMLYEAIMAAINSVVENRGEFVGAFRENVIRVIGSYSTKNLSTEYDMQIEKLQ  442
            +    KE  LY A+M+AIN ++    + + ++ EN+  VIG       +TEY++      
Sbjct  371  NRTV-KEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE------TTEYQI------  417

Query  443  TEMLALIEENAKQGVVTEDFDERYKGISERINDMKQKK-LDQVRELKMAENYQQRLNDMD  501
            +E+   +EE+ K+ +   + ++ Y  +++ I+++++K+ +  V +  ++ + ++R+N++ 
Sbjct  418  SEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGE-NERINELI  476

Query  502  ACLKKTTCDVRDFDHDLVRRLLQSVKAIRDDEIEIQFKSGIVM  544
              ++K      ++D+ LVR+++QSV ++ ++++ I FKSGI M
Sbjct  477  EFIRKNKFRTLEYDDKLVRKIIQSV-TVYEGHFVIAFKSGIEM  518

43) Csac_0475 in NC_009437


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  403 bits (1518),  Expect = 8e-114, Method: Compositional matrix adjust.
 Identities = 248/428 (58%), Positives = 339/428 (80%), Gaps = 0/428 (0%)

Query  1    MQGKIDMIITKSISRFARNTLDCLKYIRQLKEKNIPVYFEKENINTLDSKGEILLTIMas  60
            M+G+IDM+ITKSISRFARNTLDCL+YIRQLK+KNI+VYFEKENINT D+KGE+LLTIMAS
Sbjct  93   MDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMAS  152

Query  61   laqqesqslsqNVKLGIQYRYQQGKIHINHNRFLGYTKDKDGNLVIVPEEAEIVKRIYRE  120
            LAQQESQSLSQNVKLG+QYRYQQGK+++NH+RF+GYTKD DGNL IVPEEAEI+KRIYRE
Sbjct  153  LAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYRE  212

Query  121  YLEGSSMLQIARGLKADGILTGAGNHRWHTSTINKILRNEKYIGDALLQKTYTVDFLSKK  180
            YLEG S++ I+R+L  DGILT+AG+ RW+  +++KIL+NEKYIGDALLQKT TVDFL+KK
Sbjct  213  YLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKK  272

Query  181  RVPNNGIVPQYYVENSHEPIIPREIYMQVQEQLVKRRCVHISKNGKKRNYSNNHPLSQIV  240
            RV N+G VPQYYVENSHE+IIP+E+++Q QE++ +R  +  +   +KR YS++ +LS I 
Sbjct  273  RVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKRIYSSKYALSAIT  332

Query  241  FCGNCHEIFRRVHWNNRGKKSIVWRCVSRLENTGLFCTASTILEDTLKEKIVEAINVAVS  300
            FCG+C +I+RRV WN +G+K +VWRCV+R+E+    C   T+ ED L   ++ AIN  ++
Sbjct  333  FCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLA  392

Query  301  GKNSFLAILKKNIETVLSVDLDETTADIDKRleelqaeliqlaNSKEAYDNIVNEIYRLR  360
            G N+ +  L  NI++V++   +   ++I++ LEE Q ELI+LAN  + YD++ +EI  LR
Sbjct  393  GGNNMIKTLEENIHAVIGETTEYQISEINNSLEEKQKELIKLANKGQDYDHLADEIDELR  452

Query  361  DLRQETLSRNALRQDKRDRIAEMTDFLNTQTGDITEFDDKLVRKLVEKAIVYDDRLVVEF  420
            D RQ  L  +A   +  +RI E+ +F+  +     E+DDKLVRK+++   VY++++V+ F
Sbjct  453  DKRQILLVEDASLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAF  512

Query  421  KSGLEIEV  428
            KSG+E+E+
Sbjct  513  KSGIEMEI  520

44) Desgi_3517 in NC_021184


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  402 bits (1513),  Expect = 3e-113, Method: Compositional matrix adjust.
 Identities = 247/524 (48%), Positives = 373/524 (72%), Gaps = 23/524 (4%)

Query  24   SIKPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSATN  83
            + K ++K LRVAAYCRVST  E+Q++SYE QVS YTE IK N +W +AGI+ADDG S+TN
Sbjct  19   AAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTN  78

Query  84   TKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLMNIRKLKEKNVAVFFEKEGVNT  143
            TKKRD+FN MI +CM G+IDMVITKS+SRFARNT+D L  IR+LK+KN++V+FEKE +NT
Sbjct  79   TKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINT  138

Query  144  LEGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNGELVI  203
             ++ GE+L+TI++S AQ+ES++LS+N + GL  R+++G V VNH++F+GYTKD +G+L I
Sbjct  139  TDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTI  198

Query  204  VPEEAELVRRIFRLYLEGSSVIQIAKLLESEGITTVTGGTKWWDSTINKMLSNEKYMGDV  263
            VPEEAE+++RI+R YLEG S++ I++ LE +GI T +G  +W+  +++K+L NEKY+GD 
Sbjct  199  VPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDA  258

Query  264  LQQKTYTIDFLTKKRVKNDGIVPQYYIEDDHEAIIPKELFYQVQEEKARRASLSKTAATR  323
            L QKT T+DFLTKKRVKN+G VPQYY+E+ HEAIIPKELF Q QEE  RR+++    +  
Sbjct  259  LLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGK-  317

Query  324  kakqeqekkkskysskFALSDIMVCKECGQPYRRQVWSKYGQKSAVWRCENRLKNGTKNC  383
                    +K  YSSK+ALS I  C +CG+ YRR  W+  G+K  VWRC  R+ +G   C
Sbjct  318  --------NKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVC  369

Query  384  KHSPTFKEAVLHEAVMTAINSVVENRGEFVGAFRENVIRVIGSYSTKNVPTEYDEQIQKL  443
            K+  T KE  L  AVMTAIN ++    + + ++ EN+  VIG        TEY  QI  +
Sbjct  370  KN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE------TTEY--QISEI  420

Query  444  QGEMLALIEENAKQGSITEDFDEQYHRIAEQINDLKQKKLEMVRDQKMAENFQQRLDDMD  503
            +  +    EE+ K+     + +++Y+++A++I++L++K+  ++ ++      ++R++++ 
Sbjct  421  NNSL----EEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELI  476

Query  504  ACLKKTTYEVRDFDNDLVRRLLQSIKAVKDDLIELQFKSGIVMN  547
              ++K  +   ++D+ LVR+++QS+    ++++ + FKSGI M+
Sbjct  477  EFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEME  519

45) DSY3426 in NC_007907


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  402 bits (1511),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 253/539 (47%), Positives = 378/539 (71%), Gaps = 22/539 (4%)

Query  21   VKKKNISMIPPQPEYDRSI-RPQFKALRVAAYCRVSTTQEQQETSYEAQISYYTEKIKSN  79
            +  KNI +IP++   + +  + ++K LRVAAYCRVST  E+Q++SYE Q+S YTE IK N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  80   PNWKFAGIYADDGKSATNTKKRNDFNTMIEDCLAGKIDMVITKSVSRFARNTVDSLQNIR  139
             +W FAGI+ADDG S+TNTKKR++FN MI +C+ G+IDMVITKS+SRFARNT+D LQ IR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  140  KLKEKNIAVFFEKEGINTLEGSGELLITILSSQAQEESRNLSENTRWGLVRRFEKGIVSI  199
            +LK+KNI+V+FEKE INT ++ GE+L+TI++S AQ+ES++LS+N + GL  R+++G V +
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  200  NHNKFLGYTKDENGELVIVPEEAKLVRRIFLLYLEGKSLAKICKILESEGIRTVTGLKKW  259
            NH++F+GYTKDE+G+L IVPEEA +++RI+  YLEG+SL  I + LE +GI T +G  +W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  260  CSGVIYKMLSNEKYMGDVLQQKSYTIDYLNKKRVKNDGIVPQYYIEDDHEAIIPKELFYR  319
             +  + K+L NEKY+GD L QK+ T+D+L KKRVKN+G VPQYY+E+ HEAIIPKELF +
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  320  VQEEKARRAGLRKTTATRRAKQEKEKSKYSSIYALSDIMICKECGLPYRRQIWSKYGRKS  379
             QEE  RR+ +          + K+K  YSS YALS I +C +CG  YRR  W+  GRK 
Sbjct  301  AQEEIHRRSNIYTG-------EGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKE  353

Query  380  AVWRCENRLKNGTKHCKHSPTLKEEVLQGAVMTAINSVVENQGEFVGAFRENVIRVIGSY  439
             VWRC  R+ +G   CK+  T+KE+ L GAVMTAIN ++    + + ++ EN+  VIG  
Sbjct  354  FVWRCVTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGET  412

Query  440  STKNIPTPYDGEIEKLQNQMLALIEENARKGSVTEEFDQQYQGIAMQIKDLKQKKLELAR  499
            +  +I+   +  +E  Q++++ L    A KG       Q+Y+ +A +I +L++K+  L  
Sbjct  413  TEYQISEI-NNSLEEKQKELIKL----ANKG-------QDYDHLADEIDELRDKRQILLV  460

Query  500  ERKQAESIQQRVVDMDAYLKRTTCEVREFDDDLVRRLLQNIRVINDELLEIQFRSGIVM  558
            E     + ++R+ ++  ++++      E+DD LVR+++Q++ V +++++ I F+SGI M
Sbjct  461  EDASLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEM  518

46) CLJU_c03770 in NC_014328


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  399 bits (1500),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 232/433 (54%), Positives = 327/433 (76%), Gaps = 3/433 (0%)

Query  3    KVSVIPAKQVQVINGIKDKKKK-RVCAYCRVSTDTDEQLTSYEAQVTYYESYIRGKPEYE  61
            ++ VIPA++     + K+K KK RV AYCRVST+T+EQ +SYE QV+ Y  +I+ + E E
Sbjct  5    NIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWE  64

Query  62   FAGIFADEGITGTNTKHRTEFKRMIDEALAGKFDMIITKSISRFARNTLDCLKYVRLLRD  121
            FAGIFAD+GI+GTNTK R EF+RMI E + G++DM+ITKSISRFARNTLDCL+Y+R L+D
Sbjct  65   FAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKD  124

Query  122  KGIGVYFEKENIDTLDSKGEVLLTILSSLAQDESRNISENSRWGIVRRFQQGKVRVNHKR  181
            K I+VYFEKENI+T D+KGEVLLTI++SLAQ+ES+++S+N + G+  R+QQGKV+VNHKR
Sbjct  125  KNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKR  184

Query  182  FLGYDKDENGELIIDEEQAKIVRRIYKEYLEGKGIRAIGKDLERDNILTGAGGRKWHDST  241
            F+GY KDE+G+L I  E+A I++RIY+EYLEG+++ +IG+ LE+D ILT+AG  +W+  +
Sbjct  185  FMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPES  244

Query  242  IQKILRNEKYSGDALLQKTITTDFLTHKRVKNKGEVQQYYVEDSHPAIISKEMFRMVQEE  301
            ++KIL+NEKY GDALLQKT+T DFLT KRVKN G+V QYYVE+SH AII+KE+F   QEE
Sbjct  245  VKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEE  304

Query  302  IKRRASLIGYSEKTKSRYTNKYAFSGRIVCGNCGSKFRRKRWGPGEKYKKYVWLCANHID  361
            I RR+++     K K  Y++KYA+S+   CG+CG  +RR  W    + K +VW C  +I+
Sbjct  305  IHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTRIE  363

Query  362  NGLKACSMKAVSEEKLKAAFVRSINKIIENKEAFIKTMMENISRVSESKEDRSELKIINE  421
            +G   C  ++V E+ L +A + +INK++   +  IKT+ ENI  V     +  ++  IN+
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTE-YQISEINN  422

Query  422  SLEELKEQMMNLV  434
            SLEE + ++++L 
Sbjct  423  SLEEKQKELIKLA  435

47) LGAS_1491 in NC_008530


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  398 bits (1498),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 249/471 (53%), Positives = 352/471 (75%), Gaps = 5/471 (1%)

Query  31   VQVDHYKELIQKEPPWEFAGIYADDGISGTNTKKREQFNKMIAACKVGKIDLIVTKSISR  90
            VQV HY E+I+K+  WEFAGI+ADDGISGTNTKKR++FN+MIA C  G+ID+++TKSISR
Sbjct  48   VQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISR  107

Query  91   FARNTIDCLKYIRDLKAINVAIFFEKENINTMDAKGEVLITIMaslaqqeseslsqNVKM  150
            FARNT+DCL+YIR+LK  N++++FEKENINT DAKGEVL+TIMASLAQQES+SLSQNVK+
Sbjct  108  FARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKL  167

Query  151  GIQYRYQQGKVFVNHNHFLGYTKDAQGNLVIEPEEAKVIKRIFYSYLNGMTMKQIADSLK  210
            G+QYRYQQGKV VNH++F+GYTKD +GNL I PEEA +IKRI+  YL+G ++  I+ +L 
Sbjct  168  GLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALE  227

Query  211  ADGILTGGKTKNWRSSSVAKILKNEKYMGDALLQKTYTVDFLNKKRVKNEGIMPQYYVEN  270
             DGILT++    WR+ SV KIL+NEKY+GDALLQKT TVDFL KKRVKNEG +PQYYVEN
Sbjct  228  KDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVEN  287

Query  271  DHPAIIPKSVFMQVQQIIKQRRNGITTKNGKHRRI-NGKYCFSQKVFCGKCGDILQRNMW  329
             H AIIPK +F+Q Q+ I +RR+ I T +GK++RI ++KY +S   FCG CGDI +R  W
Sbjct  288  SHEAIIPKELFLQAQEEI-HRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYW  346

Query  330  -YRPEKVAVWRCASRVRRNKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELASKQIKAN  388
              +  K  VWRC +R+  ++    C  R VKE  L  A + A+N+L+ G +   K +  N
Sbjct  347  NIHGRKEFVWRCVTRI--EQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEEN  404

Query  389  IMKVIKNSKGPTLDQIDQQLEEVQMKLIQAANQHQDCDALTQQIMDLRRQKEKVQSRETD  448
            I  VI ++    + +I++ LEE Q  LI+ AN+ QD D L+++I +LR +++ +   ++ 
Sbjct  405  IHAVIGETTEYQISEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDAS  464

Query  449  QQAKLHSIDEINELVNLHKYGLVDFDEQLVRRLVEKITIFQRYMEFTFKDG  499
              +  + I+E+ E++  +K+  +++D++LVR++++ +T+++    ++FK G
Sbjct  465  LSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSG  515

48) DHBDCA_p1321 in NC_018866


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  398 bits (1499),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 251/520 (49%), Positives = 369/520 (71%), Gaps = 19/520 (3%)

Query  24   SIKPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIFADDGKSATN  83
            + K ++K LRVAAYCRVST  E+Q++SYE QVS YTE IK N +W +AGIFADDG S+TN
Sbjct  19   AAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTN  78

Query  84   TKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNVAVFFEKEGVNT  143
            TKKRD+FN MI +CM G+IDMVITKS+SRFARNT+D LQ IR+LK+KN++V+FEKE +NT
Sbjct  79   TKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINT  138

Query  144  LDGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNNELVI  203
             D+ GE+L+TI++S AQ+ES++LS+N + GL  R+++G V VNH++F+GYTKD + +L I
Sbjct  139  TDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTI  198

Query  204  VPEEAELVRRIFRLYLEGSSIVQITKILESEGITTVTGLDKWCPGTINKMLSNEKYMGDV  263
            VPEEAE+++RI+R YLEG S+V I + LE +GI T +G  +W P +++K+L NEKY+GD 
Sbjct  199  VPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDA  258

Query  264  LQQKTYTIDFLTKKRVLNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLHKPSVAR  323
            L QKT T+DFLTKKRV N G VPQYY+E+ HEAIIPKEL+ Q QEE  RR+++       
Sbjct  259  LLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGE---  315

Query  324  kekkekskysskFALTDIMVCKECGQPYRRQIWSKYGQKTAVWRCDNRLKNGTKNCKHSP  383
               K+K  YSSK+AL+ I  C +CG+ YRR  W+  G+K  VWRC  R+ +G   CK+  
Sbjct  316  --GKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKN-R  372

Query  384  TFKEDVLHEAIMTAINSVVENRGEFVGAFRENVIRVIGNYSTKNVPTEYDGQIEKLQAEM  443
            T KED L  A+MTAIN ++    + + ++ EN+  VIG+ +T    +E +  +E  Q E+
Sbjct  373  TVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE-TTEYQISEINNSLEEKQKEL  431

Query  444  LALIEENAKQGSITEDFDEQYHRIAERINDLKQKKLELVREQKMAANFQQRVEDMDACLK  503
            + L +             ++Y+++A+ I++L++K+  L+ E+   +  ++R++++   ++
Sbjct  432  IKLANKG-----------QDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  504  KTTCEVGEFDNDLVRRLLQSIKAVKDDLIEIQFKSGIVMN  543
            K      E+D+ LVR+++QS+    ++++ I FKSGI M+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEME  519

49) Desdi_1399 in NC_019903


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  398 bits (1497),  Expect = 6e-112, Method: Compositional matrix adjust.
 Identities = 249/520 (48%), Positives = 370/520 (72%), Gaps = 21/520 (4%)

Query  25   KPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSATNTK  84
            K ++K LRVAAYCRVST  E+Q++SYE QVS YTE IK N +W +AGI+ADDG S+TNTK
Sbjct  21   KEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTK  80

Query  85   KRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNVAVFFEKEGVNTLE  144
            KRD+FN MI +CM G+IDMVITKS+SRFARNT+D LQ IR+LK+KN++V+FEKE +NT +
Sbjct  81   KRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTD  140

Query  145  GTGELLITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNGELVIVP  204
            + GE+L+TI++S AQ+ES++LS+N + GL  R+++G V VNH++F+GYTKD +G+L IVP
Sbjct  141  AKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVP  200

Query  205  EEADLVRRIFRLYLEGSSIIQITKILESEGITTVTGKSQWCPGVIDKMLSNEKYMGDVLQ  264
            EEA++++RI+R YLEG S++ I + LE +GI T +GK++W P  + K+L NEKY+GD L 
Sbjct  201  EEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALL  260

Query  265  QKTYTIDFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRASLSktaaarra  324
            QKT T+DFLTKKRVKN G VPQYY+E+ HEAIIPKEL+ Q QEE  RR+++        +
Sbjct  261  QKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNI-------YT  313

Query  325  kqekekskysskFALSDIMVCKECGQPYRRQVWSKYGQKSAVWRCENRLKNGTKNCKHSP  384
             + K+K  YSSK+ALS I  C +CG+ YRR  W+  G+K  VWRC  R+ +G   CK+  
Sbjct  314  GEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKN-R  372

Query  385  TFKEEILHEAIMTAINSVVENRGEFVGAFRENVIRVIGSYSTKNMTTEFDGQIEKLQGEM  444
            T KE+ L  A+MTAIN ++    + + ++ EN+  VIG  +T    +E++  +E  Q E+
Sbjct  373  TVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE-TTEYQISEINNSLEEKQKEL  431

Query  445  LALIEENAKQGSIKEDFDERYKRIAEQINDLKQKKLELVREQKMAVNFQQRLDDMDACLK  504
            + L +             + Y ++A++I++L++K+  L+ E+      ++R++++   ++
Sbjct  432  IKLANKG-----------QDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR  480

Query  505  KTTCEVREFDNDLVRRLLQNIKAVKDDLIEIQFKSGIVMN  544
            K      E+D+ LVR+++Q++    ++++ I FKSGI M+
Sbjct  481  KNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEME  519

50) Desaci_1341 in NC_018068


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  393 bits (1478),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 240/496 (49%), Positives = 348/496 (71%), Gaps = 18/496 (3%)

Query  3    TVTVIPA-KPMQELKGLEATAKLRVCAYARVSTDNEEQLSSYQAQVEHYTSYIQNNPAWE  61
             + VIPA K +    + E   KLRV AY RVST+ EEQ SSY+ QV HYT +I++N  WE
Sbjct  5    NIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWE  64

Query  62   FVEIFSDEGISGTNTKKREGFNRMIDECMAGKIDMVITKSISRFARNTLDTLKYVRQLKE  121
            F  IF+D+GISGTNTKKR+ FNRMI ECM G+IDMVITKSISRFARNTLD L+Y+RQLK+
Sbjct  65   FAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKD  124

Query  122  KGVAIFFEKEVVNTLDSKGEFLITLLGSLAQEESSNLSQITKMGISYRFQEGKVLVNHNK  181
            K ++++FEKE +NT D+KGE L+T+++SLAQ+ES +LSQ  K+G+ YR+Q+GKV VNH++
Sbjct  125  KNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKR  184

Query  182  FLGYTKDEQGQLVIVPEEAEVVRRIYREFLDGKSPYKIASNLQKDGLITGAGGTKWYDST  241
            F+GYTKDE+G+L IVPEEAE+++RIYRE+L+G+S   I+  L+KDG++T+AG  +W   +
Sbjct  185  FMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPES  244

Query  242  VIGILKNVKYMGDALLQKTYTVDFLTKKRVKNTGHAAQYYVEDSHEAIISKEEFAAVQAE  301
            V  IL+N KY+GDALLQKT TVDFLTKKRVKN GH +QYYVE+SHEAII+KE F   Q E
Sbjct  245  VKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEE  304

Query  302  FERRANMRGYSKTGKSK--FTSDYAFSGKLFCGNCGSKFRRSKWGSGKNLQIVWICINH-  358
            ++RR+N+  Y+  GK+K  ++S YA+S+  FCG+CG  +RR  W      ++VW C+ + 
Sbjct  305  IHRRSNI--YTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRI  362

Query  359  -QTGGDCDMKPVKEKALEQAFVRAMNRIIANKEA---YLTEETTG-----PQFDFEAIDS  409
             Q    C  + VKE  L  A + A+N+++A  +     L E+  +      ++++  I++
Sbjct  363  EQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINN  422

Query  410  KIDELQQELIDAVRNNQEYS--TAEIERLQAHKQRRKNDEAERAWKGRLVEDFKSYLDAR  467
             ++E Q+ELI    + Q+Y   + EI+ L+  +Q    ++A  +     ++++  ++   
Sbjct  423  SLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKN  482

Query  468  DGKPLDKFDGDLFRKL  483
              + L+ +D+ L RK+
Sbjct  483  KFRTLE-YDDKLVRKI  497

51) LM5923_1807 in NC_013768


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  392 bits (1476),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 265/535 (50%), Positives = 385/535 (72%), Gaps = 20/535 (3%)

Query  7    KNISVIPSQPEYDRSI-KVQFKMLRVAAYCRVSTTLEQQESSYEAQVSYYTEKIQSNPNW  65
            KNI VIP++   + +  K ++K LRVAAYCRVST  E+Q+SSYE QVS YTE I+ N +W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  66   KLAGIYADDGKSATNTKKRDDFNTMIDDCMAGKIDLVITKSVSRFARNTVDSLQNIRKLK  125
             +AGI+ADDG S+TNTKKRD+FN MI +CM G+ID+VITKS+SRFARNT+D LQ IR+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  126  EKNIGVIFEKEGVNTLDGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGVISVNHT  185
            +KNI+V FEKE +NT D+ GE+L+TI++S AQ+ES++LS+N + GL  R+++G + VNH 
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  186  KFLGYTKDENGELVIVPEEAELVRRIFRLYLEGNSSIKIAKILKADGIKTVTGMDTWQPS  245
            +F+GYTKDE+G+L IVPEEAE+++RI+R YLEG+S + I++ L  DGI T +G   W+P 
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  246  VIDQMLRNEKYMGDALLQKTYTVDFLSKKRVKNQGIVPQYYIEDNHEAIIPRELFYRAQE  305
             + ++L+NEKY+GDALLQKT TVDFL+KKRVKN+G VPQYY+E++HEAIIP+ELF +AQE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  306  EKARRAAIYkpsiekksktekskysskyslsDIMICGECGQPYRRQTWSKYGQKSAVWRC  365
            E  RR+ IY          +K  YSSKY+LS I +CG+CG+ YRR  W+  G+K  VWRC
Sbjct  304  EIHRRSNIY-----TGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  366  DNRLKNGTKNCKHSPTLKEQPLYEAIMTAINSVVENQGEFVGAFRENVIRVIGSYSTRHI  425
              R+ +G   CK+  T+KE+ LY A+MTAIN ++    + + ++ EN+  VIG  +  +I
Sbjct  359  VTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQI  417

Query  426  PSEYDEQIEKLQGEMLTLIEENAKQGSVNENFDEQYHSIAEKIRElklkklklTQENRLA  485
             SE ++ +E  Q E++ L    A++G   +++ ++ + + +K      +++ L ++  L+
Sbjct  418  -SEINNSLEEKQKELIKL----ANKGQDYDHLADEIDELRDK------RQILLVEDASLS  466

Query  486  ETFSQRIDDVDHCLKDITSTVGGYDDELVRRLLQSVKVISEDKLEIQFKSGIVME  540
               ++RI+++ + ++        YDD LVR+++QSV V  E+ + I FKSGI ME
Sbjct  467  GE-NERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVY-EGHFVIAFKSGIEME  519

52) LM5578_1855 in NC_013766


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  392 bits (1476),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 265/535 (50%), Positives = 385/535 (72%), Gaps = 20/535 (3%)

Query  7    KNISVIPSQPEYDRSI-KVQFKMLRVAAYCRVSTTLEQQESSYEAQVSYYTEKIQSNPNW  65
            KNI VIP++   + +  K ++K LRVAAYCRVST  E+Q+SSYE QVS YTE I+ N +W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  66   KLAGIYADDGKSATNTKKRDDFNTMIDDCMAGKIDLVITKSVSRFARNTVDSLQNIRKLK  125
             +AGI+ADDG S+TNTKKRD+FN MI +CM G+ID+VITKS+SRFARNT+D LQ IR+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  126  EKNIGVIFEKEGVNTLDGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGVISVNHT  185
            +KNI+V FEKE +NT D+ GE+L+TI++S AQ+ES++LS+N + GL  R+++G + VNH 
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  186  KFLGYTKDENGELVIVPEEAELVRRIFRLYLEGNSSIKIAKILKADGIKTVTGMDTWQPS  245
            +F+GYTKDE+G+L IVPEEAE+++RI+R YLEG+S + I++ L  DGI T +G   W+P 
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  246  VIDQMLRNEKYMGDALLQKTYTVDFLSKKRVKNQGIVPQYYIEDNHEAIIPRELFYRAQE  305
             + ++L+NEKY+GDALLQKT TVDFL+KKRVKN+G VPQYY+E++HEAIIP+ELF +AQE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  306  EKARRAAIYkpsiekksktekskysskyslsDIMICGECGQPYRRQTWSKYGQKSAVWRC  365
            E  RR+ IY          +K  YSSKY+LS I +CG+CG+ YRR  W+  G+K  VWRC
Sbjct  304  EIHRRSNIY-----TGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  366  DNRLKNGTKNCKHSPTLKEQPLYEAIMTAINSVVENQGEFVGAFRENVIRVIGSYSTRHI  425
              R+ +G   CK+  T+KE+ LY A+MTAIN ++    + + ++ EN+  VIG  +  +I
Sbjct  359  VTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQI  417

Query  426  PSEYDEQIEKLQGEMLTLIEENAKQGSVNENFDEQYHSIAEKIRElklkklklTQENRLA  485
             SE ++ +E  Q E++ L    A++G   +++ ++ + + +K      +++ L ++  L+
Sbjct  418  -SEINNSLEEKQKELIKL----ANKGQDYDHLADEIDELRDK------RQILLVEDASLS  466

Query  486  ETFSQRIDDVDHCLKDITSTVGGYDDELVRRLLQSVKVISEDKLEIQFKSGIVME  540
               ++RI+++ + ++        YDD LVR+++QSV V  E+ + I FKSGI ME
Sbjct  467  GE-NERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVY-EGHFVIAFKSGIEME  519

53) Clo1100_3475 in NC_016791


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  389 bits (1462),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 259/534 (49%), Positives = 380/534 (72%), Gaps = 20/534 (3%)

Query  9    KNISVIPSQPEYDRSI-KPQFKTLRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNW  67
            KNI VIP++   + +  K ++K LRVAAYCRVST  E+Q++SYE QVS YTE IK N +W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  68   KLAGIYADDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLK  127
             +AGI+ADDG S+TNTKKRD+FN MI +CM G+IDMVITKS+SRFARNT+D LQ IR+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  128  EKNIAVFFEKEGVNTLEGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGIVSVNHN  187
            +KNI+V+FEKE +NT ++ GE+L+TI++S AQ+ES++LS+N + GL  R+++G V VNH+
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  188  KFLGYTKDKNGELVIVPEEAELVRRIFRLYLEGSSIVQIGKILDDEGITTVTGLTQWCPG  247
            +F+GYTKD +G+L IVPEEAE+++RI+R YLEG S+V IG+ L+ +GI T +G  +W P 
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  248  VIDKMLSNEKYMGDVLQQKTYTVDFLSKKRVKNNGIVPQYYIQDDHEAIVPKELYYRVQE  307
             + K+L NEKY+GD L QKT TVDFL+KKRVKN+G VPQYY+++ HEAI+PKEL+ + QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  308  EKTRraslsksavarkakkekskysskyalTDIMVCKECGQPYRRQIWSKYGQKSAVWRC  367
            E  R     +S +     K+K  YSSKYAL+ I  C +CG+ YRR  W+  G+K  VWRC
Sbjct  304  EIHR-----RSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  368  ENRLKNGTKNCRNSPTLKEEVLQEAVMTAINSVVENRGEFVGAFRENVIQVIGSYSTKNV  427
              R+ +G   C+N  T+KE+ L  AVMTAIN ++    + + ++ EN+  VIG  +T   
Sbjct  359  VTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE-TTEYQ  416

Query  428  PTEYDGQIEKLQGEMLALIEENAKKGSLTEDFDEQYQRIAEQIKNLKQKKLDLVRERKQA  487
             +E +  +E  Q E++ L    A+KG       ++Y+++A++I +L++K+  L+ E    
Sbjct  417  ISEINNSLEEKQKELIKL----ANKG-------QDYDHLADEIDELRDKRQILLVEDASL  465

Query  488  ESFQQRVTDMDVCLKKTTCEIREFDNDLVRRLLQNIRVINEELIEIQFKSGIVM  541
             + ++R+ ++   ++K      E+D+ LVR+++Q++ V + +++ I FKSGI M
Sbjct  466  SGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEM  518

54) Clo1100_3409 in NC_016791


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  388 bits (1459),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 256/537 (48%), Positives = 382/537 (72%), Gaps = 22/537 (4%)

Query  9    KNISMIPSRPEYDRSI-KPQFKALRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNW  67
            KNI +IP+R   + +  K ++K LRVAAYCRVST  E+Q++SYE QVS YTE IK N +W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  68   KLAGIYADDGKSATNTKKRDDFNAMIEDCMAGKIDMIITKSVSRFARNTVDSLQNIRKLK  127
             +AGI+ADDG S+TNTKKRD+FN MI +CM G+IDM+ITKS+SRFARNT+D LQ IR+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  128  EKNIAVFFEKEGVNTLEGTGELLITILSSQAQEESRNLSENTRWGLVRRFENGVVSVNHN  187
            +KNI+V+FEKE +NT ++ GE+L+TI++S AQ+ES++LS+N + GL  R+++G V VNH+
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  188  KFLGYTKDKNGELVIVPEEAELVRRIFRLYLEGKSIVEIIKvletegvttvtglDKWCPG  247
            +F+GYTKD +G+L IVPEEAE+++RI+R YLEG+S+V I + LE +G+ T +G  +W P 
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  248  TINKMLSNEKYMGDVLQQKTYTIDFLTKKRVKNQGIVPQYYIEDDHEAIIPKELYYQVQE  307
            +++K+L NEKY+GD L QKT T+DFLTKKRVKN+G VPQYY+E+ HEAIIPKEL+ Q QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  308  EKARRASLSktaaarrakqekekskysskFALSDIMVCKECGQPYRRQVWSKYGQKSAVW  367
            E  RR+++        + + K+K  YSSK+ALS I  C +CG+ YRR  W+  G+K  VW
Sbjct  304  EIHRRSNI-------YTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVW  356

Query  368  RCENRLKNGTKNCKHSPTFKEDILYEAIMTAINSVVENRGEFVGAFRENVIRVIGSYSTK  427
            RC  R+ +G   CK+  T KED LY A+MTAIN ++    + + ++ EN+  VIG  +T 
Sbjct  357  RCVTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE-TTE  414

Query  428  NVPTEYDGQIEKLQGEMLALIEQNAKQGSITEDFDEQYQRIAEQIRDLKQKKLELVRAQK  487
               +E +  +E  Q E++ L ++            ++Y+++A++I +L++K+  L+  + 
Sbjct  415  YQISEINNSLEEKQKELIKLANKG-----------QDYDHLADEIDELRDKRQILLVEDA  463

Query  488  IAENFQQRLDDMDTCLKKTTCEVREFDNDLVRRLLQNIKAVKEDLIEIQFKSGIVMN  544
                 ++R++++   ++K      E+D+ LVR+++Q++     +++ I FKSGI M+
Sbjct  464  SLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEME  519

55) Closa_2762 in NC_014376


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  384 bits (1445),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 248/541 (46%), Positives = 373/541 (69%), Gaps = 24/541 (4%)

Query  3    VAKKTVAIIPPQMKYDRHVRVEQ-KTLRVAAYCRVSTLLEQQEGSYEAQVDYYTEKINSN  61
            ++ K + +IP++ + +     E+ K LRVAAYCRVST  E+Q++SYE QV  YTE I+ N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  62   PNWKCAGIFADDGKSATQTKKRDDFNAMIDACMAGKVDLVLTKSVSRFARNTVDALQCIR  121
             +W  AGIFADDG S+T+TKKRD+FN MI  CM G++D+V+TKS+SRFARNT+D LQ IR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  122  KLKEKNVPVIFEKEGVNTMESGGELLITILSSQAQEESRNISENTRWGLTRRFENGIISV  181
            +LK+KN++V FEKE +NT ++ GE+L+TI++S AQ+ES+++S+N + GL  R+++G + V
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  182  NHKKFLGYTKDDDGNLIIVPDEAVIVKRIFREYLEGKSIIQIAKGLQDDGIKTVTGLENW  241
            NHK+F+GYTKD+DGNL IVP+EA I+KRI+REYLEG+S++ I+++L+ DGI T +G   W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  242  HPGTIDKMLSNEKFCGDACMQKTYTIDFLTKKKVKNQGYAPQYYIEDNHEAIIPKELFHQ  301
            +P ++ K+L NEK+ GDA +QKT T+DFLTKK+VKN+G  PQYY+E++HEAIIPKELF Q
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  302  VQVEKARRASLNKAAVTRkankakkekskysskyVLTELLTCGECGHSYRRQTWSKYGQK  361
             Q E  RR+++  +           +K  YSSKY L+ +  CG+CG+ YRR  W+  G+K
Sbjct  301  AQEEIHRRSNIYTGEGK--------NKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRK  352

Query  362  SAVWRCEDRLKQGTSSKCHHSPTLKEEQLHDAIMKAINKVVENNGDFIGTFRENVIRVIG  421
              VWRC  R+ QG    C +  T+KE++L +A+M AINK++    + I T+ EN+  VIG
Sbjct  353  EFVWRCVTRIEQGPEV-CKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIG  410

Query  422  NYSTKGVTTEYDDQIDALQKQMLTLIEDNARQGAVSEEFDEAYRKLSEQINELKQAKIQL  481
            + +T    +E ++ ++  QK+++ L +             + Y  L+++I+EL++ +  L
Sbjct  411  E-TTEYQISEINNSLEEKQKELIKLANKG-----------QDYDHLADEIDELRDKRQIL  458

Query  482  VRAQKQAENYAERVDELDKAIKTVNPEVREFDQELVKRLIYSIKVNKGMKITIQFHSGIV  541
            +  +       ER++EL   I+  +    E+D+ LV+++I S+ V  G  + I F SGI 
Sbjct  459  LVEDASLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEG-HFVIAFKSGIE  517

Query  542  M  542
            M
Sbjct  518  M  518

56) DSY4590 in NC_007907


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  384 bits (1443),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 236/500 (48%), Positives = 354/500 (71%), Gaps = 21/500 (4%)

Query  2    EQQETSYEAQISYYTEKIKSNPNWKFAGIYADDGKSATNTKKRDDFKAMIGDCLAGKIDM  61
            E+Q++SYE Q+S YTE IK N +W FAGI+ADDG S+TNTKKRD+F+ MI++C+ G+IDM
Sbjct  40   EEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDM  99

Query  62   VITKSVSRFARNTVDSLQNIRKLKEKNIAVFFEKEGVNTLEGSGELLITILSSQAQEESR  121
            VITKS+SRFARNT+D LQ IR+LK+KNI+V+FEKE +NT ++ GE+L+TI++S AQ+ES+
Sbjct  100  VITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQ  159

Query  122  NLSENTRWGLVRRFEKGIVSINHNKFLGYTKDENGELVIVPKEAELVRRIFRLYLEGKSL  181
            +LS+N + GL  R+++G V +NH++F+GYTKDE+G+L IVP EAE+++RI+R YLEG+SL
Sbjct  160  SLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSL  219

Query  182  AKICKILESEGIRTVTGLKKWRSGVIYKMLSNEKYMGDVLQQKSYTIDYLNKKRVKNNGI  241
              I + LE +GI T +G  +WR+  + K+L NEKY+GD L QK+ T+D+L KKRVKN+G 
Sbjct  220  VGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGH  279

Query  242  VPQYYIEDDHEAIIPKELFYRVQEEKARRAGLRKTAATRRAKQEKEKSKYSSIYALSDIM  301
            VPQYY+E+ HEAIIPKELF + QEE  RR+ +          + K+K  YSS YALS I 
Sbjct  280  VPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTG-------EGKNKRIYSSKYALSAIT  332

Query  302  VCKECGQPYRRQIWSKYGRKSAVWRCENRLKNGTKHCRHSPTLKEEVLQGAVMTAINSVV  361
             C +CG+ YRR  W+  GRK  VWRC  R+ +G   C++  T+KE+ L GAVMTAIN ++
Sbjct  333  FCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLL  391

Query  362  ENRGEFVGAFRENVIRVIGSYSTKNVSTQYDGEIEKLQSQMLALIEENARKGSVTEEFDQ  421
                + + ++ EN+  VIG  +T    ++ +  +E  Q +++ L    A KG       Q
Sbjct  392  AGGNNMIKTLEENIHAVIGE-TTEYQISEINNSLEEKQKELIKL----ANKG-------Q  439

Query  422  QYQGIAMQIKDLKQKKLELARERKQAEDFQQRVVDMDAYLKRTTCEVREFDDDLVRRLLQ  481
            +Y+ +A +I +L++K+  L  E     + ++R+ ++  ++++      E+DD LVR+++Q
Sbjct  440  DYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQ  499

Query  482  NIRVINDELLEIQFRSGIVM  501
            ++ V +++++ I F+SGI M
Sbjct  500  SVTVYEGHFV-IAFKSGIEM  518

57) ROI_03000 in NC_021040


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  383 bits (1441),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 249/536 (47%), Positives = 379/536 (71%), Gaps = 19/536 (3%)

Query  4    TAKKISMIPAKVQYDRNV-KLSEKKMKVAAYCRVSTELEEQDSSYEAQVEYYTSKISENE  62
            T K+I +IPA+ + +    K   KK++VAAYCRVSTE EEQ+SSYE QV  YT  I  N+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   NWKNAGIYADDGKSGTNTKKRADFNAMIQDALAGKIDMILTKSVSRFARNTVDSLVTIRK  122
            +W  AGI+ADDG SGTNTKKR +FN MI + + G+IDM++TKS+SRFARNT+D L  IR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKEKNVAVVFEKEGINTLEGTGEILITILSSLAQEESRNISENIRWGVVRKFEKGKVIVN  182
            LK+KN++V FEKE INT ++ GE+L+TI++SLAQ+ES+++S+N++ G+  ++++GKV VN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  CTKFMGYTKNEDGDLVIVPEEAEIVKLIFRLYLEGYSTGKIAKHLEEQGIKTATGQDKWH  242
              +FMGYTK+EDG+L IVPEEAEI+K I+R YLEG S   I++ LE +GI TA+G+ +W+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  STVIDKMLRNEKYMGDALLQKTYTVDFMTKKKVKNTGLVPQYYVEDDHEAIIPKELFYRV  302
            +  + K+L+NEKY+GDALLQKT TVDF+TKK+VKN G VPQYYVE+ HEAIIPKELF + 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEEMMRRASLCKAAVTRKKNQRSRYSSTYALTGMLICGKCGQEYRRVTWARNGKKKVVWR  362
            QEE+ RR+++  +    K+     YSS YAL+++ +CG CG+ YRRV W  +G+K  VWR
Sbjct  302  QEEIHRRSNIYTGEGKNKRI----YSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWR  357

Query  363  CSNRLTNGVKKCGESETLEENALNRAVMEAIHRITSDDMEFMENFRQNIIHVIGNYSTAK  422
            C  R+ +G   C +  T+ E+ L  AVM AI+++ +++ + +  + +NI  VIG+ +T  
Sbjct  358  CVTRIEQGPEVCKNR-TVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE-TTEY  415

Query  423  ESGeyeekikekreeMVALIAENAKTGSYTPEFDERYRTIAEEINALKEAQKTARNEKRM  482
            + +E ++ + EK+ E++ L               + Y  +A+EI+ L++ ++    E   
Sbjct  416  QISEINNSLEEKQKELIKLANKG-----------QDYDHLADEIDELRDKRQILLVEDAS  464

Query  483  ADSYEQRIQDIDHYLSTSTCQIPEFDNDLVRRLISTIKVESSEKLLIQFQSGIVME  538
              + ++RI+++ +++  +  +  E+D+ LVR++I ++ V  ++ ++I F+SGI ME
Sbjct  465  LSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGH-FVIAFKSGIEME  519

58) EUR_11320 in NC_021010


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 250/536 (47%), Positives = 378/536 (71%), Gaps = 19/536 (3%)

Query  4    TAKKISMIPAKVQYDRNV-KLSEKKMKVAAYCRVSTELEEQDSSYEAQVEYYTSKISENE  62
            T K+I +IPA+ + +    K   KK++VAAYCRVSTE EEQ+SSYE QV  YT  I  N+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   NWKNAGIYADDGKSGTNTKKRADFNAMIQDALAGKIDMILTKSVSRFARNTVDSLVTIRK  122
            +W  AGI+ADDG SGTNTKKR +FN MI + + G+IDM++TKS+SRFARNT+D L  IR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKEKNVAVVFEKEGINTLEGTGEILITILSSLAQEESRNISENIRWGVVRKFEKGKVIVN  182
            LK+KN++V FEKE INT ++ GE+L+TI++SLAQ+ES+++S+N++ G+  ++++GKV VN
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  CTKFMGYTKNEDGDLVIVPEEAEIVKLIFRLYLEGYSTGKIAKHLEEQGIKTATGQDKWH  242
              +FMGYTK+EDG+L IVPEEAEI+K I+R YLEG S   I++ LE +GI TA+G+ +W+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  STVIDKMLRNEKYMGDALLQKTYTVDFMTKKKVKNTGIVPQYYVEDDHEAIIPKELFYRV  302
            +  + K+L+NEKY+GDALLQKT TVDF+TKK+VKN G VPQYYVE+ HEAIIPKELF + 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEEMMRRASLCKAAVTRKKNQRSRYSSTYALTGMLICGKCGQEYRRVTWARNGKKKVVWR  362
            QEE+ RR+++  +    K+     YSS YAL+++ +CG CG+ YRRV W  +G+K  VWR
Sbjct  302  QEEIHRRSNIYTGEGKNKRI----YSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWR  357

Query  363  CSNRLTNGVKKCGESETLEENTLNRAVMEAIHRITSDDMEFMENFRQNIIHVIGNYSTAk  422
            C  R+ +G   C +  T+ E+ L  AVM AI+++ +++ + +  + +NI  VIG+ +T  
Sbjct  358  CVTRIEQGPEVCKNR-TVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGE-TTEY  415

Query  423  eseeyeekikekqeeMVALIAENAKTGSYTPEFDERYRTIAEEINALKEAQKTARNEKWM  482
            +  E ++ + EKQ E++ L               + Y  +A+EI+ L++ ++    E   
Sbjct  416  QISEINNSLEEKQKELIKLANKG-----------QDYDHLADEIDELRDKRQILLVEDAS  464

Query  483  ADSYEQRIQDIDHYLSTSTCQIPEFDNDLVRRLISTIKVESSEKLLIQFQSGIVME  538
              + ++RI+++ +++  +  +  E+D+ LVR++I ++ V  ++ ++I F+SGI ME
Sbjct  465  LSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGH-FVIAFKSGIEME  519

59) PPE_00831 in NC_014483


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  371 bits (1393),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 225/532 (43%), Positives = 367/532 (69%), Gaps = 15/532 (2%)

Query  6    TAKKVVIVPV-KTLDIVEGIQPIQKKKVAAYCRVSTDSEEQKESYTNQVNHYTKYIQNNL  64
            T K+++++P  K ++   + + I+K +VAAYCRVST++EEQ+ SY  QV+HYT +I++N 
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  65   EWEMADIYADEGITGTSTKNRTHFNRMIQDARNGKLDLILVKSISRFAMNTLDLLKYVRE  124
            EWE A+I+AD+GI+GT+TK+R +FNRMI +  +G++D+++ KSISRFA NTLD L+Y+R+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  125  LKSLGVAVFFERENINTLDTTGEVLLTILSSLAQDESRNISENSRWGILRGFQNGKVFCN  184
            LK   ++V+FE+ENINT D+ GEVLLTI++SLAQ+ES+++S+N + G+   +Q+GKV  N
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  185  TTRFLGYDKDEHGELVINEKEAEIVRRIYEEYLDGKSYQAIARGLMRDKIKTVTGGDTWW  244
              RF+GY KDE+G+L I   EAEI++RIY EYL+G+S  +I+R+L +D I T +G   W+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  245  DSSITLILTNEKYYGALLQQKTVTVDFLTHKRIRNKGQEQQYLIEDNHEPIVSKELFEAV  304
              S+  IL NEKY G  L QKTVTVDFLT KR++N G+  QY +E++HE+I++KELF   
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  305  QKEKERRAKMKGSVMGDSKRYSSKYALSSKVYCGCCGAIFKRRTWNSNNASKKVVWQCKT  364
            Q E +RR+++  +   + + YSSKYALS+  +CG CG I++R  WN  ++ K  VW+C T
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNI-HGRKEFVWRCVT  360

Query  365  YVSEGKAACDAKSVDEQVLYAAFVRVFNRMYENKKRLIKTLKANIESVLSSRVEQKSLLD  424
             + +G   C  ++V E+ LY+A +  +N++    + +IKTL  NI++V++   E     +
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTE----YQ  416

Query  425  IEGQMQQLKSDLKELVNLKLRNQIDETVYDEETNRLSNELNELRQQKLTLDKEEEQKANI  484
            I    + L    KEL++L  + Q        + ++L++E++ELR+++  L  E+   +  
Sbjct  417  ISEINNSLEEKQKELIKLANKGQ--------DYDHLADEIDELRDKRQILLVEDASLSGE  468

Query  485  KERVDEIIQVLSLREDILEQFDDNLFNALVEKITILSPAHFVFTLKSRTDID  536
            +ER++E+I+ +        ++DD+L   +++ +T+   +HFV+++KS  +++
Sbjct  469  NERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYE-GHFVIAFKSGIEME  519

60) HPL003_12150 in NC_016641


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  363 bits (1365),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 224/532 (43%), Positives = 364/532 (69%), Gaps = 15/532 (2%)

Query  6    TAKKVVIVPI-KTMDIVEGIQSIQKKKVAAYCRVSTDSEEQKESYTNQVNHYTQYIQNNL  64
            T K+++++P  K ++   + + I+K +VAAYCRVST++EEQ+ SY  QV+HYT++I++N 
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  65   EWEMADIYADEGITGTNTKNRTHFNRMIQDARNGKLDLILVKSISRFARNTLDLLKYVRE  124
            EWE A+I+AD+GI+GTNTK+R +FNRMI +  +G++D+++ KSISRFARNTLD L+Y+R+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  125  LKSLGVAVFFERENINTLDTTGEVLLTILSSLAQDESRNISENSRWGILRGFQNGKVFCN  184
            LK   ++V+FE+ENINT D+ GEVLLTI++SLAQ+ES+++S+N + G+   +Q+GKV  N
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  185  TTRFLGYDKDEHGELVINEKEAEIVRRIYEEYLDGKSYQAIARGLIRDHIKTVTGGDTWW  244
              RF+GY KDE+G+L I   EAEI++RIY EYL+G+S  +I+R+L +D I T +G   W+
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  245  DSSITLILTNEKYYGALLQQKTVTVDFLTHKRIRNKGQEQQYLIEDNHEPIVSKEIFDAV  304
              S+  IL NEKY G  L QKTVTVDFLT KR++N G+  QY +E++HE+I++KE+F   
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  305  QKEKERRAKLKGSVMGESKRYSSKYALSSKVYCGCCGAIFKRRTWNSNNPSKKVVWQCKT  364
            Q E +RR+++  +   + + YSSKYALS+  +CG CG I++R  WN +   K  VW+C T
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVT  360

Query  365  YVNEGKAACDAKSVDEQVLHSAFVRLFNRMYENKERFMKTLKANIVSVLSSKVGREPLLE  424
             +++G   C  ++V E+ L +A +  +N++    +  +KTL  NI +V++         +
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTE----YQ  416

Query  425  IEGQMQQLKSDLKELVNLKLRNQIDESVYAEETNRLSSELNELRQQMLILeeeedqkeki  484
            I    + L    KEL++L  + Q        + ++L+ E++ELR++  IL  E+      
Sbjct  417  ISEINNSLEEKQKELIKLANKGQ--------DYDHLADEIDELRDKRQILLVEDASLSGE  468

Query  485  keRVDEIIQVLSSRQDILEQFVDNLFNALVEKITILSPAHFVFTLKSGMSID  536
            +ER++E+I+ +   +    ++ D+L   +++ +T+   +HFV+++KSG+ ++
Sbjct  469  NERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYE-GHFVIAFKSGIEME  519

61) Tph_c07870 in NC_018870


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  359 bits (1349),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 218/535 (41%), Positives = 357/535 (67%), Gaps = 20/535 (3%)

Query  12   EKQIIIIPANPLVAQN--RTFPRQLRAAAYCRVSTDQEEQLTSYEAQVAYYTDKIMSNPE  69
            EK+I++IPA   V+    +   ++LR AAYCRVST+ EEQ +SYE QV+ YT+ I  N E
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  70   WTLAGIFADEGITGTSVKKRTNFLRMIRLCRKGKIDIILTKSISRFARNTVDCLNYIREL  129
            W +AGIFAD+GI+GT+ KKR +F RMI  C  G+ID+++TKSISRFARNT+DCL+YIR+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  130  KELGIAVIFENENINTMKADTEIIITMLAGFAQAQSESISQNVRWGKRQAFKSGKVSFQY  189
            K+  I+V FE+ENINT  A  E+++T++A++AQ +S+S+SQNV+ G +  ++ GKV  + 
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  190  SRIYGYERGENDKPRVVPEQAAVVRRIFQSYLAGSSVPDIKRMLEAEGIVAAEGKPQWSV  249
             R+ GY ++E+++  +VPE+A +++RI++ YL G S+ +I R LE +GI++A GKP+W  
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  250  GALQYMLRNEKYCGDALLQKTFVENCISKKTRKNNGELPKYLVQNHHEAIIDRTLFEKVQ  309
             +++ +L+NEKY GDALLQKT   + ++KK  KN+G++P+Y V+N HEAII + LF + Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  310  AEIARRAGKRKVSDKTSKTGQSKYSGRYALTELLICGNCGTPYKRVTWSKRGKKKIVWRC  369
             EI RR+      +K  +     YS++YAL+ + +CG+CG  Y+RV W+ +G+K +VWRC
Sbjct  303  EEIHRRSNIYTGEGKNKRI----YSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  370  ISRLDYGTKYCKSSPTVDEERLQAAVLKAINAMMSNRERLIGILKTNLKITLSEKSSGAT  429
            ++R++ G   CK + TV E+ L +AV+ AIN +++  + +I  L  N+   +     G T
Sbjct  359  VTRIEQGPEVCK-NRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVI-----GET  412

Query  430  NPYAIENRIRELQDSMMELVAVAAKAGNAESYEDKFREISEEIKSLQKTLEQYQAEQNGP  489
              Y I +    L++   EL+ +A K+       + + ++++EI  L+   +    E+ + 
Sbjct  413  TEYQISEINNSLEEKQKELIKLANKG-------QDYDHLADEIDELRDKRQILLVEDASL  465

Query  490  DELARQMDDICKALEDAPFEITEYSNNIVRQFIDTIKVVNEDKLLFIFKGGITME  544
                 +++++   +    F   EY +++VR++I+++  V E+ +++ FK+GI ME
Sbjct  466  SGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSV-TVYEGHFVIAFKSGIEME  519

62) HM1_0131 in NC_010337


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  358 bits (1344),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 218/535 (41%), Positives = 357/535 (67%), Gaps = 20/535 (3%)

Query  12   EKQIIIIPANPLVAQN--RTFPRQLRAAAYCRVSTDQEEQLTSYEAQVAYYTDKIMSNPE  69
            EK+I++IPA   V+    +   ++LR AAYCRVST+ EEQ +SYE QV+ YT+ I  N E
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  70   WTLAGIFADEGITGTSVKKRTNFLRMIRLCRKGKIDIILTKSISRFARNTVDCLNYIREL  129
            W +AGIFAD+GI+GT+ KKR +F RMI  C  G+ID+++TKSISRFARNT+DCL+YIR+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  130  KELGIAVIFENENINTMKADTEIIITMLAGFAQAQSESISQNVRWGKRQAFKSGKVSFQY  189
            K+  I+V FE+ENINT  A  E+++T++A++AQ +S+S+SQNV+ G +  ++ GKV  + 
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  190  SRIYGYERGENDKPRVVPEQAAVVRRIFQSYLAGSSVPDIKRMLEAEGIAAAGGKPQWSV  249
             R+ GY ++E+++  +VPE+A +++RI++ YL G S+ +I R LE +GI +A+GKP+W  
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  250  GALQYMLRNEKYCGDALLQKTFVENCISKKTRKNNGELPKYLVQNHHEAIIDRTLFEKVQ  309
             +++ +L+NEKY GDALLQKT   + ++KK  KN+G++P+Y V+N HEAII + LF + Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  310  AEIARRAGKRKVSDKTSKTGQSKYSGRYALTELLICGNCGTPYKRVTWSKRGKKKIVWRC  369
             EI RR+      +K  +     YS++YAL+ + +CG+CG  Y+RV W+ +G+K +VWRC
Sbjct  303  EEIHRRSNIYTGEGKNKRI----YSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  370  ISRLDYGTKYCKSSPTVDEERLQAAVLKAINAMMSNRERLIGILKTNLKITLSEKSSGAT  429
            ++R++ G   CK + TV E+ L +AV+ AIN +++  + +I  L  N+   +     G T
Sbjct  359  VTRIEQGPEVCK-NRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVI-----GET  412

Query  430  NPYAIENRIRELQDSMMELVAVAAKAGNAESYEDKFREISEEIKSLQKTLEQYQAEQNGP  489
              Y I +    L++   EL+ +A K+       + + ++++EI  L+   +    E+ + 
Sbjct  413  TEYQISEINNSLEEKQKELIKLANKG-------QDYDHLADEIDELRDKRQILLVEDASL  465

Query  490  DKLARQMDDICKALEDAPFEITEYSNNIVRQFIDTIKVVNEDKLLFIFKGGITME  544
                 +++++   +    F   EY +++VR++I+++  V E+ +++ FK+GI ME
Sbjct  466  SGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSV-TVYEGHFVIAFKSGIEME  519

63) DCF50_p1382 in NC_018867


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  344 bits (1290),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 214/528 (41%), Positives = 352/528 (67%), Gaps = 15/528 (2%)

Query  6    KTVQVLQPIQRQDNPEDSLNMSKRKVCAYCRVSTDSDEQMESYNAQVSEYKKKITENPEW  65
            K + V+ + +R ++     ++ K +V AYCRVST+++EQ  SY+ QVS+Y   I  N EW
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  66   EFVDIYADAGISGTNVKHRLAFNRMIRDCENGKVDLVITKSISRFARNTVDCLKHVRELK  125
            EF +I+AD GISGTN K R  FNRMI +C +G++D+VITKSISRFARNT+DCL+ +R+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  126  NIGVEVFFEKENIYSFDSKMELVLTMLSSIAQEESRNISENTKWGLRKRFRDGVTVCNTE  185
            +  + V+FEKENI + D+K E++LT+++S+AQ+ES+++S+N K GL+ R+++G    N  
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  186  RFLGYDKDESGNLIINEEQATIVRRIFREYLDGKGYAAIGRGLEVDGIITVAGKTKWWDS  245
            RF+GY KDE GNL I  E+A I++RI+REYL+G++  +IGR+LE DGI+T AGK +W+  
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  246  SIRGILENEKYYGELLLQKTVTVDYLTKKRVDNDNIEPMYRIDNNHEPIISKEMFDLVQQ  305
            S++ IL+NEKY G+ LLQKTVTVD+LTKKRV N+   P Y ++N+HE+II+KE+F   Q+
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  306  ERKRRFEITRGRDEDRRKYSNKYGFSGKLYCEKCGKTLKRRHWNVGTKSEKIVWQCNSYI  365
            E  RR +I  G + ++R YS+KY++S+  +C  CG   +R  WN+  + E +VW+C + I
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKE-FVWRCVTRI  362

Query  366  -QGVKNCSAKAVDDATLKRAFIQLYNDMVVDKGSFFKVFLDNINKVMTKESKVSEINKVT  424
             QG   C  ++V +  L  A +   N ++ +  + +K + +NI+ V+  E+   +I+ + 
Sbjct  363  EQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIG-ETTEYQISEIN  421

Query  425  ESMGLLEQDLSELVQLKLRKQIDDKYFNKEYERITNELEKVSIKKDNLERQHLDDVKYKE  484
            +S   LE+   EL++L  + Q        +Y+++++E++ +  K++ L  ++      +E
Sbjct  422  NS---LEEKQKELIKLANKGQ--------DYDHLADEIDELRDKRQILLVEDASLSGENE  470

Query  485  KLAAISKIVDNGDEPLVEFDDDFFIALVDKVIIKSPNHFMFILESGQE  532
            ++  +  ++ +     +E+DD +   +++ V +    HF++ + SG E
Sbjct  471  RINELIEFIRKNKFRTLEYDDKLVRKIIQSVTV-YEGHFVIAFKSGIE  517

64) TepiRe1_1004 in NC_019954


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  342 bits (1283),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 222/477 (47%), Positives = 332/477 (70%), Gaps = 30/477 (6%)

Query  13   GDDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQTIRKLKENNIAI  72
            +DDG S+TNTKKRD+FN MI +CM G+IDMVITKS+SRFARNT+D LQ IR+LK++NI++
Sbjct  70   ADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISV  129

Query  73   FFEKEGVNTSESTGELLITILSSQAQEESRNLSENTKWGIVRRYENGIISVNHKKFMGYT  132
            +FEKE +NT+++ GE+L+TI++S AQ+ES++LS+N K G+  RY++G + VNHK+FMGYT
Sbjct  130  YFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYT  189

Query  133  KDKKSGELVILPEQAEIVRRIFRMYLEGNSILEITRALEADKIKTVTGKDKWYTGVIEKM  192
            KD   G+L I+PE+AEI++RI+R YLEG+S++ I RALE D I T +GK +W    + K+
Sbjct  190  KD-EDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKI  248

Query  193  LANEKYMGDALMQKTYTVDFLTKKRVKNNGIVPQYYIEDNHEAIIPKELFYKVQEEKARR  252
            L NEKY+GDAL+QKT TVDFLTKKRVKN+G VPQYY+E++HEAIIPKELF + QEE  RR
Sbjct  249  LQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRR  308

Query  253  ASLNKSAITRkanklkkekskfsskYALTEILVCAECGHPYRRQTWSKYGQKSAVWRCEN  312
            +++  +          K+K  +SSKYAL+ I  C++CG+ YRR  W+  G+K  VWRC  
Sbjct  309  SNIYTGE--------GKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  313  RLKNGTKASCKHSPTLKEEPLHNTIMTAINNVVENNGDFIGAFRENVIRVIG---GYSTK  369
            R+ +G    CK+  T+KE+ L  ++MTAIN+++    + I ++ EN+  VIG    Y   
Sbjct  361  RIEQGPEV-CKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQIS  418

Query  370  DIPTKYDEQIESLQKEMLTLIEENAKQGSVAEDFDDTYKRISDQINELKQAKLKLVREKK  429
            +I    +E+    QKE++ L +             + Y +++D+I+EL++ +  L+ E  
Sbjct  419  EINNSLEEK----QKELIKLANKG-----------QDYDHLADEIDELRDKRQILLVEDA  463

Query  430  QADRYEQQLKEIDSTLKIVRPQVREFDEDLVRRLIKIIKVNKGEKLEIQFESGITME  486
                 +++++E+   ++  + +  E+D+ LVR++I+ + V  G+ + I F SGI ME
Sbjct  464  SLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGH-FVIAFKSGIEME  519

65) TepRe1_0923 in NC_015519


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  342 bits (1283),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 222/477 (47%), Positives = 332/477 (70%), Gaps = 30/477 (6%)

Query  13   GDDGKSATNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQTIRKLKENNIAI  72
            +DDG S+TNTKKRD+FN MI +CM G+IDMVITKS+SRFARNT+D LQ IR+LK++NI++
Sbjct  70   ADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISV  129

Query  73   FFEKEGVNTSESTGELLITILSSQAQEESRNLSENTKWGIVRRYENGIISVNHKKFMGYT  132
            +FEKE +NT+++ GE+L+TI++S AQ+ES++LS+N K G+  RY++G + VNHK+FMGYT
Sbjct  130  YFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYT  189

Query  133  KDKKSGELVILPEQAEIVRRIFRMYLEGNSILEITRALEADKIKTVTGKDKWYTGVIEKM  192
            KD   G+L I+PE+AEI++RI+R YLEG+S++ I RALE D I T +GK +W    + K+
Sbjct  190  KD-EDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKI  248

Query  193  LANEKYMGDALMQKTYTVDFLTKKRVKNNGIVPQYYIEDNHEAIIPKELFYKVQEEKARR  252
            L NEKY+GDAL+QKT TVDFLTKKRVKN+G VPQYY+E++HEAIIPKELF + QEE  RR
Sbjct  249  LQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRR  308

Query  253  ASLNKSAITRkanklkkekskfsskYALTEILVCAECGHPYRRQTWSKYGQKSAVWRCEN  312
            +++  +          K+K  +SSKYAL+ I  C++CG+ YRR  W+  G+K  VWRC  
Sbjct  309  SNIYTGE--------GKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  313  RLKNGTKASCKHSPTLKEEPLHNTIMTAINNVVENNGDFIGAFRENVIRVIG---GYSTK  369
            R+ +G    CK+  T+KE+ L  ++MTAIN+++    + I ++ EN+  VIG    Y   
Sbjct  361  RIEQGPEV-CKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQIS  418

Query  370  DIPTKYDEQIESLQKEMLTLIEENAKQGSVAEDFDDTYKRISDQINELKQAKLKLVREKK  429
            +I    +E+    QKE++ L +             + Y +++D+I+EL++ +  L+ E  
Sbjct  419  EINNSLEEK----QKELIKLANKG-----------QDYDHLADEIDELRDKRQILLVEDA  463

Query  430  QADRYEQQLKEIDSTLKIVRPQVREFDEDLVRRLIKIIKVNKGEKLEIQFESGITME  486
                 +++++E+   ++  + +  E+D+ LVR++I+ + V  G+ + I F SGI ME
Sbjct  464  SLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGH-FVIAFKSGIEME  519

66) Closa_2757 in NC_014376


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  340 bits (1278),  Expect = 9e-95, Method: Compositional matrix adjust.
 Identities = 207/433 (48%), Positives = 309/433 (72%), Gaps = 10/433 (2%)

Query  1    MQQKDITIIPPDPKYDSHIRIEH-KTLNVAAYCRVSTRFEQQENSYDAQIAYYTRKIGMN  59
            M +K+I +IP+  + +S    E  K L VAAYCRVST  E+Q++SY+ Q++ YT  I  N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  60   KSWNCAGIYADEGKAATGTKFRDSFNDMIEDCYAGKIDLILTKSISRFARNTVDCLRIIR  119
            + W+ AGI+AD+G ++T TK RD FN MI +C  G+ID+++TKSISRFARNT+DCL+ IR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  120  ELKERQIRILFEKENIDTMDNTGELLITILSSQAQEESRNLSENTRWGIIRKFEQGIVQV  179
            +LK+++I + FEKENI+T D  GE+L+TI++S AQ+ES++LS+N + G+  +++QG VQV
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  180  NHKKFMGYTKNEDEKLIIIPEEAAVVKRIFDLYLQGLGTYKIARVLESEGIRTTTGKEKW  239
            NHK+FMGYTK+ED +L I+PEEA ++KRI+  YL+G +   I+R LE +GI T++GK +W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  240  HHETIYKMLQCEKYMGDAILQKTYTIDFLTKKKVMNNGYVKKYYVRNSHEAIITKEQFYL  299
            + E++ K+LQ EKY+GDA+LQKT T+DFLTKK+V N+G V +YYV NSHEAII KE F  
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  300  VQEEMKRRS--CASERSTRKRYSSAYPLSGLIICGKCSGTYNRVSWQNKSGKSFVWRCRE  357
             QEE+ RRS   ++E   ++ YSS Y+LS++ +CG C++ Y RV W+  + K FVWRC  
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  358  RLKAGTVQCKQSATIRESEMMKLLSKLFNTIIKTDPADSTVYLIKT-KAVLIVNLGDKGE  416
            R+  G   CK+  T++E E   L + +  +I K  ++++   +IKT    +   +G+  E
Sbjct  361  RIEQGPEVCKNR-TVKEDE---LYGAVMTAINKLLAGGNN--MIKTLEENIHAVIGETTE  414

Query  417  FNDDDLTKQLLNK  429
            ++  ++ + L +K
Sbjct  415  YQISEINNSLEEK  427

67) ES1_13620 in NC_021043


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  337 bits (1263),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 223/534 (42%), Positives = 355/534 (67%), Gaps = 19/534 (3%)

Query  7    VPNMRIVIIPAKTQ---EEIKKAEKCLKVAAYCRVSTDEEEQKNSYQAQIEYYTDKINKN  63
            + +  I++IPA+ +      K   K L+VAAYCRVST+ EEQ++SY+ Q+  YT+ I+KN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  64   PEWQMAGIFADEGITGTQAKKRPEFLKMIRLCRQGKIDVILTKSLSRFARNTVDSLNYIR  123
             EW+ AGIFAD+GI+GT++KKR EF +MI  C +G+ID+++TKS+SRFARNT+D L+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  124  ELRTLGIAVISEKENINTLTAESEMLITIMSCFAQAESESISKNVAWGIRQSFKNGNVPM  183
            +L+   I+V  EKENINT  A +E+L+TIM+ +AQ ES+S+S+NV  G++  +++G+V +
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  184  QYKKLLGYKKGADGNAEIVSDEAEIVKEIYRCYLDGASLNQIADMLNNRGLTTKGSNSPY  243
            + K+++GY K+ DGN  IV++EAEI+K IYR YL+G SL  I+  L++ G+ T ++++  
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  244  RKEVIQRILTNEKYTGDALLQKTYITDCITKKSRKNNGELPMYLVKNHHEPIISRTDFNR  303
            R E +++IL NEKY GDALLQKT   D +TKK  KN+G++P Y V N HE+II++  F +
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  304  VQEEMARRSAKRSIAEKLTKTEQGKYSAKYALSELLICGECGSHYRRVTWTAKGFKEIKW  363
             QEE+ RRS   +   K  +     YS+KYALS + +CG+CG  YRRV W   G KE+ W
Sbjct  301  AQEEIHRRSNIYTGEGKNKRI----YSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVW  356

Query  364  RCINRIQYGKKNCHSSPTIDEQALHKAIISAINEFCEVKDEVAKALRESITEVLDPNLNG  423
            RC+ RI+ G   C  + T+ E+ L  A+++AIN +    +++ K+L E+I  V++   + 
Sbjct  357  RCVTRIEQGPEVC-KNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEY  415

Query  424  SIQAAQQRIDELAHNIDELIKLATVPETAATAMADIEKFSEEMKTLREFIETEKAKQIAV  483
             I   ++ ++E   +  ELIKLA   +       D + +++E+  LR+  +     + ++
Sbjct  416  QISEINNSLEE---KQKELIKLANKGQ-------DYDHLADEIDELRDKRQILLVEDASL  465

Query  484  QRGSAELDAILKRLEKEDFTMTEYNDVAVRQLIEKVTVESKNVITVAFKGGLEI  537
               +  ++ ++  + K+ F   EY+D  VR++I+ VTV   + + +AFK+G+E+
Sbjct  466  SGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEM  518

68) Bsel_2979 in NC_014219


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  331 bits (1241),  Expect = 8e-92, Method: Compositional matrix adjust.
 Identities = 193/393 (50%), Positives = 282/393 (72%), Gaps = 7/393 (1%)

Query  3    KTITVIPAKSR--ETEDQTTVHKKRVAAYCRVSTDHAEQLSSYEAQVKYYTDHIENHPEY  60
            K I VIPA+ R   T  +  + K RVAAYCRVST+  EQ SSYE QV  YT+ I ++ E 
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  61   DLAGIYADEGISGMSTKKREQFNKMIEDCHQGKIDRIITKSISRFARNTLDCLNYVRQLK  120
            ++AGI+AD+GISG +TKKR++FN+MI +C +G+ID +ITKSISRFARNTLDCL+Y+RQLK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  121  DLGVGIIFEKENIDTLDAKGEVLLSILSSLAQDESRSISENASWGIRRRFESGQAQINHA  180
            D  +++ FEKENI+T DAKGEVLL+I++SLAQ+ES+S+S+N   G++ R++ G+ Q+NH 
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  181  RFLGYEKNSDGELSIVPSEAETVKRIYHDFLDGKGSVQIAEELKEEGIPGWNGESKWRAS  240
            RF+GY K+ DG+L+IVP EAE +KRIY+++L+G++ V I+  L  +GI    G ++WR+ 
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  241  TIERMLENEKYKGDVLMQKTYTVDFLTRKRMKNEGELPMYLIEDNHPAIIERDTWEAVQL  300
            ++ ++L+NEKY GD L+QKT TVDFLT+KR+KNEG++P Y +E++H AII ++     Q 
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  301  EKQRRIAFVEETGSKKMTYNGDDYVFFGKVICGHCGSAFGRRTWHANDPNARRHVWLCKN  360
            E +RR  +    G +K  Y++  Y + +  +CG+CG  + R  W+ ++   +  VW C  
Sbjct  304  EIHRRSNIYTGEGKNKRIYSS-KYALSAITFCGDCGDIYRRVYWNIHGR--KEFVWRCVT  360

Query  361  RYVKGEKRCRVKNHHVNDLDLAPAFMEALNELL  393
            R  +G   C  KN+ V++ +L  A M A+N LL
Sbjct  361  RIEQGPEVC--KNRTVKEDELYGAVMTAINKLL  391

69) Bsel_2961 in NC_014219


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  330 bits (1238),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 192/397 (49%), Positives = 283/397 (72%), Gaps = 7/397 (1%)

Query  3    KTITVIPAKSR--QSEDQTSVSKKRVAAYCRVSTDHAEQLSSYEAQVKYYTDHIENHPEY  60
            K I VIPA+ R   +  +  + K RVAAYCRVST+  EQ SSYE QV  YT+ I ++ E 
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  61   DLAGIYADEGISGTSTKKREQFNKMIEDCHQGKIDRIITKSISRFARNTLDCLNYVRQLK  120
            ++AGI+AD+GISGT+TKKR++FN+MI +C +G+ID +ITKSISRFARNTLDCL+Y+RQLK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  121  DLGVGIIFEKENIDTLDAKGEVLLSILSSLAQDESRSISENASWGIRRRFESGQAQINHA  180
            D  +++ FEKENI+T DAKGEVLL+I++SLAQ+ES+S+S+N   G++ R++ G+ Q+NH 
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  181  RFLGYEKNTDGELTIVPSEAETVKRIYHDFLDGKGAVQIAEELKEEGIPGWNGESKWRAS  240
            RF+GY K+ DG+LTIVP EAE +KRIY+++L+G++ V I+  L  +GI    G ++WR+ 
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  241  TIERMLENEEYKGDVLMQKTYTVDFLTRKRMKNEGELPMYLIEDNHPAIIERDTWEAVQL  300
            ++ ++L+NE Y GD L+QKT TVDFLT+KR+KNEG++P Y +E++H AII ++     Q 
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  301  EKQRRIAFVEETGSKKMTFNGDDYVFFGKVICGHCGSAFGRRTWHANDPNARRHVWLCKN  360
            E +RR  +    G +K  +++  Y + +  +CG+CG  + R  W+ ++   +  VW C  
Sbjct  304  EIHRRSNIYTGEGKNKRIYSS-KYALSAITFCGDCGDIYRRVYWNIHGR--KEFVWRCVT  360

Query  361  RYVKGEKRCRVKNHHVNDLDLAPAFMQALKELLNQNN  397
            R  +G   C  KN+ V++ +L  A M A++ LL   N
Sbjct  361  RIEQGPEVC--KNRTVKEDELYGAVMTAINKLLAGGN  395

70) Dtox_1527 in NC_013216


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  329 bits (1233),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 191/375 (51%), Positives = 281/375 (75%), Gaps = 1/375 (0%)

Query  3    KKLTIIPTQERHDQSI-QAKTVCLRVAAYCRVSTVYERQENSYDAQVACYMDKIANNPDW  61
            K++ +IP++ R + +  + K   LRVAAYCRVST  E Q++SY+ QV+ Y + I +N +W
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  62   VLAGIYSDNGRSATNTKKRDDFNALIDDCAAGKIDLVITKSVSRFARNTVDSLLFIRKLK  121
             +AGI++D+G S+TNTKKRD+FN +I +C  G+ID+VITKS+SRFARNT+D L +IR+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  122  EMNIGVIFEKEGINTLESTGELLITVLSGQAQEESRNISENTRWGIVRQFEKGVFHVNYK  181
            + NI+V FEKE INT ++ GE+L+T++++ AQ+ES+++S+N + G+  ++++G  +VN K
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  182  KFMGYTMDENGQLIIVPEEAEIVRMIFQLYMEGRSYIQICQALENSGIKTVTGNSKWRDS  241
            +FMGYT DE+G+L IVPEEAEI++ I++ Y+EG+S + I +ALE+ GI T +G+++WR  
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  242  TLIKMLSNEKYMGDALLQKTYTINFLTKKRVVNKGIVPQYYVKNNHEAIIPADLFQSVQD  301
            ++ K+L NEKY+GDALLQKT T++FLTKKRV N G VPQYYV N+HEAIIP +LF   Q+
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  302  EKLRRINMSCGESALKQKYSALYAISNIMICGECGYPYRRVTRARRGKSKVVWRCKNRLM  361
            E  RR N+  GE+  K+ YS+ YA+S I +CG+CG  YRRV +  +G+   VWRC  R+ 
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE  363

Query  362  NGNRFCTNSPTLDEG  376
            +G   C N    ++ 
Sbjct  364  QGPEVCKNRTVKEDE  378

71) Bsel_2989 in NC_014219


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  325 bits (1221),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 188/398 (48%), Positives = 286/398 (72%), Gaps = 7/398 (1%)

Query  2    AKTITVIPAKHK--GSEGQSTVAKKRVAAYCRVSTDHAEQLSSYEAQVNYYTDHIENHPE  59
             K I VIPA+ +  ++ ++  + K RVAAYCRVST+  EQ SSYE QV+ YT+ I ++ E
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  60   YDLAGIYADEGISGTSTKKREQFNKMIEDCHQGKIDRIITKSISRFARNTLDCLNYVRQL  119
             ++AGI+AD+GISGT+TKKR++FN+MI +C +G+ID +ITKSISRFARNTLDCL+Y+RQL
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  120  KDLGVGIIFEKENIDTLDAKGEVLLSILSSLAQDESRSISENASWGIRRRFESGQAQINH  179
            KD  +++ FEKENI+T DAKGEVLL+I++SLAQ+ES+S+S+N   G++ R++ G+ Q+NH
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  180  ARFLGYEKNSDGELIIIESEADTVKRIYYDFLDGKGSVQIAEELKEEGVPGWNGESKWRA  239
             RF+GY K+ DG+L I+  EA+ +KRIY ++L+G++ V I+  L  +G+    G ++WR+
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  240  STIERMLENEKYKGDVLMQKTYTVDFLTRKRMKNEGELPMYLIEDNHPAIIERDTWEAVQ  299
             ++ ++L+NEKY GD L+QKT TVDFLT+KR+KNEG++P Y +E++H AII ++     Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  300  LEKQRRIAFVEETGSKKMTYNGDDYVFFGKVICGHCDSAFGRRTWHANDPNARRHVWLCK  359
             E +RR  +    G +K  Y++  Y + +  +CG+C+  + R  W+ ++ +    VW C 
Sbjct  303  EEIHRRSNIYTGEGKNKRIYSS-KYALSAITFCGDCGDIYRRVYWNIHGRKE--FVWRCV  359

Query  360  NRYVKGENRCRVKNHHVNDLDLAPAFMEALNELLSQNN  397
             R  +G + C  KN+ V++ +L  A M A+N LL+  N
Sbjct  360  TRIEQGPEVC--KNRTVKEDELYGAVMTAINKLLAGGN  395

72) OBV_44390 in NC_016048


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  324 bits (1214),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 226/537 (43%), Positives = 354/537 (66%), Gaps = 21/537 (3%)

Query  9    VQKRVDVIPANILLTKPNARKR--KLRVAAYCRVsteqeeqqssyaaqiayytEKINKNK  66
             +K + VIPA   +    A+ +  KLRVAAYCRVSTE EEQ+SSY  Q++ YTE I+KN+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  67   DWELAGIFADEGITGTSAKKRTEFLKLMALCEKGKVDMVLTKSVSRFSRNTLDAIGYIRK  126
            +WE+AGIFAD+GI+GT++KKR EF +++A C  G++DMV+TKS+SRF+RNTLD + YIR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  127  LKAKGIPIIFEKEGINTMEMASEMALCFLSGFAQAESESISRNVTWGKRQSFKSGKVPFQ  186
            LK K I++ FEKE INT +  +E+ L +++++AQ ES+S+S+NV  G +  ++ GKV  +
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  187  YSRLLGYEKGEDGQPKVVPEEAEIVKRIFRNYYSGASVRKIKESLEADNILSPTGKQEWS  246
              R++GY K+EDG+  +VPEEAEI+KRI+R+Y  G S+  I  +LE D IL+++GK  W 
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  247  PGVIQYMLRNERYIGDALLQKTYVVDCLTKETRKNNGEIPQYYVTGNHEPIISKDLFNLV  306
            P  ++ +L+NE+YIGDALLQKT  VD LTK   KN+G++PQYYV  +HE+II+K+LF   
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  307  QEEMarragkrkvakkavktekgkYSSKYALTELLCCGECGTQYRRVTWARNGKKKVVWR  366
            QEE+     +R     +   +K  YSSKYAL+ +  CG+CG  YRRV W  +G+K  VWR
Sbjct  302  QEEI----HRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWR  357

Query  367  CINRLEYGTKYCKESPAIEESRLHQAIVTALNRLDKDKADVIETLKAGLRLAIGSQDDDS  426
            C+ R+E G   CK+  ++ E  L  A++TA+N+L  +  ++I TL   ++  IG  +   
Sbjct  358  CVTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIG--ETTE  414

Query  427  FNEAAVQNRIAELQSVMMDLVELSSKSSAGADYFDVKFEEIAAEIKglqgqlgehqeqTM  486
            ++ + ++N + E Q    +L+ L++K+          ++++A EI  L+++      +  
Sbjct  415  YQISEINNSLEEKQ---KELIKLANKGQD--------YDHLADEIDELRDKRQILLVEDA  463

Query  487  LAQNTQARIHELLYMMENTDLSLKEYREDVVKAVTDKIVVLSPDRIRITFKGNTEME  543
                 + RI+EL+  + +  +   EY + +V+ + + + V   +++ I+FK+  EME
Sbjct  464  SLSGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYE-GHFVIAFKSGIEME  519

73) Dhaf_2440 in NC_011830


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  322 bits (1208),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 216/535 (41%), Positives = 343/535 (65%), Gaps = 20/535 (3%)

Query  5    ATRKVTVIPADPIYAQKDIRKKT--LRVAPYCRVSTNSEEQLDSYQAQIEYYTERIAAQP  62
            + +++ VIPA    +    + K   LRVA+YCRVST++EEQ  SY+ Q+  YTE I  + 
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   EWTMVDMFADEGKTATSTKKRKDFLRMIKACEKGKVDLVITKSVSRFCRNTLDGLDYVRK  122
            EW   ++FAD+G ++T+TKKR +F RMI  C  G++D+VITKS+SRF RNTLD L+Y+R+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKRMGVGVFFEKENVNTLYMDNEMILTFMMSQAQAESESMSGNIRWGHRKNFKDGKVYYH  182
            LK   ++V+FEKEN+NT     E++LT+M S AQ ES+S+S N++ G +  +++GKV  +
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  YAGFLGYRKGEDDLPEIDPEEAEIVRRVFSRYLVGHSVSKIIADLEADGIKTVRGKEKWN  242
               F+GY K+ED+   I PEEAEI++R++  YL G+S+  I   LE DGI T  GK +W 
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  DGVIRGMLKNEKYIGDALLQKTFIADLFTRQSKKNNGELPQYYVENCHPAIIDKLTFQRV  302
               ++ +L+NEKYIGDALLQKT   D++T++  KN+G++PQYYVEN H AII K  F + 
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QEEMARRSSLRKVSANAKTELAKYSGKYVLTELLSCGNCGSPYRRVTWTRPEGKKIVWRC  362
            QEE+ RRS++    ++ K     YS+KY L+ +  CG+CG  YRRV W     K +VWRC
Sbjct  302  QEEIHRRSNIYTGEGKNKR---IYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  363  INRLENGKKFCKDAPTLEESRIHAAVVSAMNEMFS-LKTMKSLLQDSILSALSGNSGETS  421
            + R+E+G   CK+  T+ E  + +AV++A+N +++  + M   L+++I  A+ G++ E  
Sbjct  359  VTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENI-HAVIGETTEYQ  416

Query  422  IAAIDSRLSELRARQYELLQFAASVGADSTQYDEDLNKVSMEFSALVSKRSELEKNQQGI  481
            I+ I++ L E   +Q EL+++A          ++D + ++ E+  L  KR  L  ++ ++
Sbjct  417  ISEINNSLEE---KQKELIKLANK--------GQDYDHLADEIDELRDKRQILLVEDASL  465

Query  482  AQADKRAEQIAAELDKVDTGITCFDELTVRQLIGAIKVLDEDKLLIRFKDGTEIE  536
            +  + R +++   + K       +D+  VR++I ++ V  E+ ++I FK G E+E
Sbjct  466  SGENERINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVY-EGHFVIAFKSGIEME  519

74) Cthe_1700 in NC_009012


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  321 bits (1205),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 191/383 (50%), Positives = 276/383 (73%), Gaps = 4/383 (1%)

Query  1    MGAYCRVSTDQLEQLSSYEAQVAYYTSYITNHPDYEFGGIYADEGISGTNTKKREQFNKM  60
            ++AYCRVST+  EQ SSYE QV+ YT +I ++ + EF+GI+AD+GISGTNTKKR++FN+M
Sbjct  29   VAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRM  88

Query  61   IEDCKAGKIDMIITKSISRFARNTLDTLNYVRQLKELGIGVIFEKENINTLDSKGEVLLT  120
            I +C  G+IDM+ITKSISRFARNTLD L+Y+RQLK+  I+V FEKENINT D+KGEVLLT
Sbjct  89   IAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLT  148

Query  121  ILSSLAQDESRSISENSTWGIRRRFEQGKLHINHTKFLGYDKDEEGNLVINEKQAKIVRR  180
            I++SLAQ+ES+S+S+N   G++ R++QGK+++NH +F+GY KDE+GNL I   +A I++R
Sbjct  149  IMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKR  208

Query  181  IYKDYLDGKGANRIARELEEEGVPNWNGKPKWYESSIRKILSNEKYKGDALLQKTYTVDF  240
            IY++YL+G++   I+R LE +G+    GKP+W   S++KIL NEKY GDALLQKT TVDF
Sbjct  209  IYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDF  268

Query  241  LTKKRAVNNGEVPMYYVEESHPAIIDKEIWEAVQLEMERRRAFAEKYNISKLDYATVDNP  300
            LTKKR  N+G+VP YYVE+SH AII KE+    Q E++RR  +      +K  Y++   +
Sbjct  269  LTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKRIYSS-KYA  327

Query  301  FAGRVICGHCGSAFGRKVWNSTDERLRRVVWRCNKKYEVKGKKSCENKHIDDKVLYHAFV  360
            +++  +CG+CG  + R  WN  +   +  VWRC  + E +G   C N+ + +  LY A +
Sbjct  328  LSAITFCGDCGDIYRRVYWNIHGR--KEFVWRCVTRIE-QGPEVCKNRTVKEDELYGAVM  384

Query  361  NTFNAMVENKEYFMEKWKEGLKS  383
             ++N ++   +  +    E + +
Sbjct  385  TAINKLLAGGNNMIKTLEENIHA  407

75) Rumal_3915 in NC_014825


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  321 bits (1205),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 227/535 (43%), Positives = 362/535 (68%), Gaps = 22/535 (4%)

Query  10   NVTMIPA---LSPAELKQSKYRQIRVAAYCRVSTDSEEQANSYQVQIEYYTNLINSNPEW  66
            N+ +IPA   ++++  K+ K +++RVAAYCRVST++EEQ +SY+VQ+  YT++I+ N EW
Sbjct  5    NIMVIPARKRVGSTAAKE-KIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  67   TLAGIFADEGISGTQTKNRKQFNKMIRKCQQKKIDLVLCKSISRFARNTVDCLEYIRELR  126
             +AGIFAD+GISGT+TK+R +FN+MI  C + +ID+V+ KSISRFARNT+DCL+YIR+L+
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  127  LLGIGVIFEKENINTMMMNSEFIISLYGSFAQAESESISKNVSWGIEKSFREGKVKYVLD  186
               I+V FEKENINT   ++E ++++ +S+AQ ES+S+S+NV  G++  +++GKV+    
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  187  KTLGYRMGEDGVPyiveeeaeivrriyvMFLDGMSMQGIADQLQSEGIKRRSGSSTWNRA  246
            + +GY  +EDG   IV EEAEI++RIY  +L+G S+ GI+  L+ +GI   +G + W   
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  247  NVNFILKNEKYAGDAILQKSYTIDCITHKRVKNNGEKNKYIVHDCHPAIIDRDTYNRVQQ  306
            +V+ IL+NEKY GDA+LQK+ T+D +T KRVKN+G+  +Y V++ H AII ++ + + Q+
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  307  ELAKRGAIKKRSAKARTELGQYSSKYALTDILICGECGTAYRRVTWTSHGHKRIVWRCIS  366
            E+ +R+ I    +K +     YSSKYAL+ I +CG+CG  YRRV W  HG+K +VWRC++
Sbjct  304  EIHRRSNIYTGEGKNKR---IYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  367  RLDHGSKYCKHSPSISEESLQNAIVKALNAVYSRNGDMLARMEQNILAVIGDNGDMQKQT  426
            R+++G+  CK+  ++ E+ L  A++ A+N + +   +M+  +E+NI AVIG+  +   Q 
Sbjct  361  RIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEY--QI  417

Query  427  AKIQKRLEEIEDERDSLVRQITSGAVDEDALDKNFESLNDEEAYLKTQLDDMQTKAKLSD  486
            + I++ LEE + E   L++    G  D D L  +++ L D    L      +   A LS+
Sbjct  418  SEINNSLEEKQKE---LIKLANKGQ-DYDHLADEIDELRDKRQIL------LVEDASLSG  467

Query  487  EKKYALMAVGEELRRHDCHLAEYDDVTVRKVIEVIRVLSKNEVQIIFKDGHEMNV  541
            E+   +  + E +R++  +  EYDD  VRK+I+ + V   + V I FK G EM++
Sbjct  468  ENE-RINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEMEI  520

76) Rumal_2253 in NC_014833


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  321 bits (1205),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 227/535 (43%), Positives = 362/535 (68%), Gaps = 22/535 (4%)

Query  10   NVTMIPA---LSPAELKQSKYRQIRVAAYCRVSTDSEEQANSYQVQIEYYTNLINSNPEW  66
            N+ +IPA   ++++  K+ K +++RVAAYCRVST++EEQ +SY+VQ+  YT++I+ N EW
Sbjct  5    NIMVIPARKRVGSTAAKE-KIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  67   TLAGIFADEGISGTQTKNRKQFNKMIRKCQQKKIDLVLCKSISRFARNTVDCLEYIRELR  126
             +AGIFAD+GISGT+TK+R +FN+MI  C + +ID+V+ KSISRFARNT+DCL+YIR+L+
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  127  LLGIGVIFEKENINTMMMNSEFIISLYGSFAQAESESISKNVSWGIEKSFREGKVKYVLD  186
               I+V FEKENINT   ++E ++++ +S+AQ ES+S+S+NV  G++  +++GKV+    
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  187  KTLGYRMGEDGVPyiveeeaeivrriyvMFLDGMSMQGIADQLQSEGIKRRSGSSTWNRA  246
            + +GY  +EDG   IV EEAEI++RIY  +L+G S+ GI+  L+ +GI   +G + W   
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  247  NVNFILKNEKYAGDAILQKSYTIDCITHKRVKNNGEKNKYIVHDCHPAIIDRDTYNRVQQ  306
            +V+ IL+NEKY GDA+LQK+ T+D +T KRVKN+G+  +Y V++ H AII ++ + + Q+
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  307  ELAKRGAIKKRSAKARTELGQYSSKYALTDILICGECGTAYRRVTWTSHGHKRIVWRCIS  366
            E+ +R+ I    +K +     YSSKYAL+ I +CG+CG  YRRV W  HG+K +VWRC++
Sbjct  304  EIHRRSNIYTGEGKNKR---IYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT  360

Query  367  RLDHGSKYCKHSPSISEESLQNAIVKALNAVYSRNGDMLARMEQNILAVIGDNGDMQKQT  426
            R+++G+  CK+  ++ E+ L  A++ A+N + +   +M+  +E+NI AVIG+  +   Q 
Sbjct  361  RIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEY--QI  417

Query  427  AKIQKRLEEIEDERDSLVRQITSGAVDEDALDKNFESLNDEEAYLKTQLDDMQTKAKLSD  486
            + I++ LEE + E   L++    G  D D L  +++ L D    L      +   A LS+
Sbjct  418  SEINNSLEEKQKE---LIKLANKGQ-DYDHLADEIDELRDKRQIL------LVEDASLSG  467

Query  487  EKKYALMAVGEELRRHDCHLAEYDDVTVRKVIEVIRVLSKNEVQIIFKDGHEMNV  541
            E+   +  + E +R++  +  EYDD  VRK+I+ + V   + V I FK G EM++
Sbjct  468  ENE-RINELIEFIRKNKFRTLEYDDKLVRKIIQSVTVYEGHFV-IAFKSGIEMEI  520

77) SANR_0787 in NC_022239


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  320 bits (1202),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 195/433 (46%), Positives = 303/433 (70%), Gaps = 9/433 (2%)

Query  2    AKNITVIPAKKTI-QVEQKQHIQKIRMAAYCRVSTDQDEQLSSYENQVRYYQDYIRQNTL  60
             KNI VIPA+K +     K+ I+K+R+AAYCRVST+ +EQ SSYE QV  Y ++I++N  
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  61   YELVDIYADEGISGTNTKKRTEFNRLIADCRKGKVDRIIVKSISRFSRNTLDCLKYVREL  120
             E+ +I+AD+GISGTNTKKR EFNR+IA+C  G++D +I KSISRF+RNTLDCL+Y+R+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  121  KELGIGVTFEKENIDSLDAKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEIRVDT  180
            K+  I+V FEKENI++ DAKGEVLLTI++SLAQ+ES+S+S+N   G++ ++++G ++V+ 
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  181  TKFVGYDKGENGNLVINEEQAKIVRRIFRDFLQGETPESIARSLKEEGVPGWNGKVNWYP  240
             +F+GY K+E+GNL I  E+A I++RI+R++L+G++  +I+R+L  +G+    GK  W P
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  241  TTIQRMFQNEKYMGDALLQKTYTVDFLTKKRSENQGQVNQYYIEGNHEAIIDKEEWEFVQ  300
             ++++++QNEKY+GDALLQKT TVDFLTKKR  N+G+V QYY+E +HEAII KE     Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  301  LEIERRNRF--RQDNHINFYIIQCEQNPFTCKVFCKECGSLFGRKNWTTSRGKRPVWQCN  358
             EI+RR+ +   ++++  +Y  +   +++T   FC +CG ++ R  W     K  VW+C 
Sbjct  303  EEIHRRSNIYTGEGKNKRIYSSKYALSAIT---FCGDCGDIYRRVYWNIHGRKEFVWRCV  359

Query  359  NRYKVKGIQGCTNRHIDEETLQQAFLRAIEFLQENKEKLCEKWSNFSDE--QKLEKYHAA  416
             R   +G + C NR + E+ L  A + AI+ L    +++     +  +        Y+ +
Sbjct  360  TRIE-QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQIS  418

Query  417  QLDELLDSVQEEF  429
            ++++ L+  Q E+
Sbjct  419  EINNSLEEKQKEL  431

78) Desdi_1761 in NC_019903


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  317 bits (1189),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 210/508 (42%), Positives = 341/508 (68%), Gaps = 18/508 (3%)

Query  33   AAYCRVSTNQEEQLTSYEAQMAYYTDKIMTNPEWTMAGIFADEGITGTSAKKRPEFLRMI  92
            AAYCRVST+ EEQ +SYE Q++ YT+ I  N EW  AGIFAD+GI+GT++KKR EF RMI
Sbjct  30   AAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRMI  89

Query  93   RLCKRGKIDVILTKSISRFARNTVDCLNYIRELKELGIPVIFEKENINTMKADSEIIITM  152
              C  G+ID+++TKSISRFARNT+DCL+YIR+LK+  I+V FEKENINT  A +E+++T+
Sbjct  90   AECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTI  149

Query  153  LGGFAQAESESISQNVRWGKRQSFKSGKVSFQYSRIYGYERGEDDRPHVIPEQAEVVKRI  212
            ++++AQ ES+S+SQNV+ G +  ++ GKV  +  R+ GY ++ED+   ++PE+AE++KRI
Sbjct  150  MASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRI  209

Query  213  FENYLAGMSVANIKKMLEADGISAAGGKPLWSEGALQYLLRNEKYCGDALLQKTYIENCI  272
            + +YL G S+  I + LE DGI +A+GKP W   +++ +L+NEKY GDALLQKT   + +
Sbjct  210  YREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFL  269

Query  273  SKKIKKNNGELPKYLVKDHHEAIIGRPLFELVQAEIARRAGKRkvsdktsktqqskyssR  332
            +KK  KN+G++P+Y V + HEAII + LF   Q EI RR+            ++  YSS+
Sbjct  270  TKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSN----IYTGEGKNKRIYSSK  325

Query  333  YAMTELLVCGDCGSAFRRVTWAKRGKKKVVWRCISRLDYGTKYCQNSPTIeeealhaall  392
            YA++ +  CGDCG  +RRV W  +G+K  VWRC++R++ G   C+N  T+ E+ L +A++
Sbjct  326  YALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKN-RTVKEDELYGAVM  384

Query  393  DAINKAMENREQLIGILKSNLEITLSEKNCEEVNPLLLESRIRELQKTMMELVAVSVKAG  452
             AINK +   +++I  L  N++  ++E    +++   +++ + E QK ++ L      A 
Sbjct  385  TAINKLLAGGNNMIKTLEENIHAVIGETTEYQISE--INNSLEEKQKELIKL------AN  436

Query  453  NARSYEDKFKEISEEIQSLQKALESHKAQQNGPDALTLQIEDLCRTLQDAPFECTEYKDS  512
            +++ Y++    +++EI+ L+   +    ++ +  +   +I++L   ++   F   EY D 
Sbjct  437  KGQDYDH----LADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNKFRTLEYDDK  492

Query  513  VVRQLIDTIKVMSEDKLLIIFKGGFKME  540
            +VR++I+++ V  E+ ++I FK+G+ ME
Sbjct  493  LVRKIIQSVTV-YEGHFVIAFKSGIEME  519

79) SDSE_1359 in NC_019042


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  316 bits (1186),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 202/409 (50%), Positives = 292/409 (72%), Gaps = 11/409 (2%)

Query  3    KSITVIPAKK-VQTSVFHQVRKKIKVAAYCRVSTDQEEQLSSYENQVNYYREYISKHEDY  61
            K+I VIPA+K V ++   +  KK++VAAYCRVST+ EEQ SSYE QV+ Y E+I K+++ 
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  62   ELVDIYADEGISATNTKKRDAFNRLIQDCRAGKVDRILVKSISRFARNTLDCIKYVRELK  121
            E+ +I+AD+GIS+TNTKKRD FNR+I +C  G++D ++ KSISRFARNTLDC++Y+R+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  122  ELGVGVTFEKENIDSLDSKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEVRVNTT  181
            +  ++V FEKENI++ D+KGEVLLTI++SLAQ+ES+S+S+N   G++ ++++G V+VN  
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  182  KFMGYDKDENGRLIINPQQAETVKFIYEKFLEGYSPESIAKYLNDNEIPGWTGKANWYPS  241
            +FMGY KDE+G L I P++AE +K IY  +LEG S  +I++ L+ + I   +GK+ W P 
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  242  AIQKMLQNEKYKGDALLQKTFTVDFLTKKRVQNDGQVNQYYVENSHEAIIDKDTWELVQL  301
            +++K+LQNEKY GDALLQKT TVDFLTKKRV+N+G+V QYYVENSHEAII K+     Q 
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  302  ELARR-KAYREEHQLKSYIMQNDDNPFTTKVFCKECGSAYGRKNWTTSRGKRKVWQCNNR  360
            E+ RR + Y  E + K   + +   ++++  FC +CG  Y R  W     K  VW+C  R
Sbjct  304  EIHRRSNIYTGEGKNKR--IYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  361  YRVKGQSGCQNNHIDEETLEKAVVMAVE-LLSENVDLLHGKWNKILEEN  408
               +G   C+N  + E+ L  AV+ A++ LL+   +++     K LEEN
Sbjct  362  IE-QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMI-----KTLEEN  404

80) SAK_0764 in NC_007432


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  315 bits (1180),  Expect = 5e-87, Method: Compositional matrix adjust.
 Identities = 187/377 (50%), Positives = 274/377 (73%), Gaps = 6/377 (1%)

Query  4    TVTHQQATKIRVAAYCRVSTDQDEQLSSYENQVSYYRDYILKHEDYELVDIYADEGISAT  63
            T + ++  K+RVAAYCRVST+ +EQ SSYE QVS Y ++I K+++ E+ +I+AD+GIS+T
Sbjct  18   TAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGT  77

Query  64   NTKKREAFNRLIQDCRAGKVDRILVKSISRFARNTLDCIKYVRELKELGIGVTFEKENID  123
            NTKKR+ FNR+I +C  G++D ++ KSISRFARNTLDC++Y+R+LK+  I+V FEKENI+
Sbjct  78   NTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENIN  137

Query  124  SLDSKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEVRVNTTKFMGYDKDENGKLV  183
            + D+KGEVLLTI++SLAQ+ES+S+S+N   G++ ++++G V+VN  +FMGY KDE+G+L 
Sbjct  138  TTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLT  197

Query  184  INPEQAEVVKHIYHQFLKGYSPESIAKELNTNGIKGWSGKANWYPSSILKMLQNEKYKGD  243
            I PE+AE++K+IY+++L G S  +I++ L+ +GI   +GK+ W P S+ K+LQNEKY GD
Sbjct  198  IVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGD  257

Query  244  ALLQKTYTVDFLTKKRTENDGQVNQYYVTNNHEAIIDTEMWDTVQEELARRKDF--REKH  301
            ALLQKT TVDFLTKKR  N+G+V QYYV N+HEAII  E+    QEE+ RR ++   E  
Sbjct  258  ALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGK  317

Query  302  KLKTYIMQSDDNPFTTKVFCAECGSAFGRKNWTTSRGKRKVWQCNNRYKVKGQIGCQNNH  361
            + + Y   S   ++++  FC++CG  + R  W     K  VW+C  R   +G   C+N  
Sbjct  318  NKRIY---SSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE-QGPEVCKNRT  373

Query  362  IDEEMLEKAFMKAVELL  378
            + E+ L  A M A++ L
Sbjct  374  VKEDELYGAVMTAINKL  390

81) Closa_3176 in NC_014376


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  311 bits (1164),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 209/448 (47%), Positives = 308/448 (69%), Gaps = 12/448 (2%)

Query  10   QKKVDVIPANILLTKPNARKR--KLRVAAYCRVsteqeeqqssyaaqiayytDKISKNKD  67
            +K++ VIPA   +    A+ +  KLRVAAYCRVSTE EEQ+SSY  Q++ YT+ I KN++
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  68   WELAGIFADEGITGTSAKKRTEFLKLMALCEKGKIDMVLTKSVSRFSRNTLDAIGYIRKL  127
            WE+AGIFAD+GI+GT++KKR EF +++A C  G+IDMV+TKS+SRF+RNTLD + YIR+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  128  KAKGIPIIFEKEGINTMEMASEMALCFLSGFAQAESESISRNVTWGKRQSFKSGKVPFQY  187
            K K I++ FEKE INT +  +E+ L +++++AQ ES+S+S+NV  G +  ++ GKV  + 
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  188  SRLLGYEKGEDGQPKIVPDEAEIVKRIFRSYYSGASVRTIKESLEADNILSPTGKQEWSV  247
             R++GY K+EDG+  IVP+EAEI+KRI+R Y  G S+  I  +LE D IL+++GK  W  
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  248  GVLQYMLRNERYIGDALLQKTYVADCLTKETRKNNGEIPQYYVTGNHEPIISKDLFNLVQ  307
              ++ +L+NE+YIGDALLQKT   D LTK   KN+G++PQYYV  +HE+II+K+LF   Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  308  EEIarragkrkvakkavktekgkYSSKYALTELLCCGDCGTQYRRVTWARNGKKKVVWRC  367
            EEI     +R     +   +K  YSSKYAL+ +  CGDCG  YRRV W  +G+K  VWRC
Sbjct  303  EEI----HRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  368  INRLEYGTKYCKESPTIEESRLHQAIVTALNRLDEDKADVIETLKAGLRLAIGTQDDDSF  427
            + R+E G   CK + T+ E  L  A++TA+N+L  +  ++I TL   ++  IG  +   +
Sbjct  359  VTRIEQGPEVCK-NRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIG--ETTEY  415

Query  428  NEAAVKNRIAELQSVMMDLVELSSKSSA  455
            + + ++N + E Q    +L+ L++K+  
Sbjct  416  QISEINNSLEEKQ---KELIKLANKGQD  440

82) Ethha_1857 in NC_014828


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  309 bits (1157),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 185/400 (47%), Positives = 279/400 (70%), Gaps = 15/400 (3%)

Query  4    QKKVTTIPASRTRFSSTPITEK-KKRKVAGYARVSTDHDDQFTSYEAQIDYYTNYIKGRD  62
            +K++  IPA R R +ST+  EK KK +VA+Y RVST+ ++Q +SYE Q+  YT++IK  +
Sbjct  3    EKNIMVIPA-RKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  63   DWEFVNVYTDEGISGTGIKKRIGFQNMIEDALAGKIDLIVTKSVSRFARNTVDSLTTIRK  122
            +WEF  +++D+GISGT  KKR  F+ MI + + G+ID+++TKS+SRFARNT+D L  IR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  123  LKENGVECYFEKENIWTFDGKGELLITIMSSLAQEESRSISENCTWGQRKRFADGKVTVP  182
            LK++ +  YFEKENI T D+KGE+L+TIM+SLAQ+ES+S+S+N   G + R+ +GKV V 
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  183  FHRFLGYDRGPNGELIVNPEEAETVRRIYRLFLQGLTYNGIAKQLTNDGIKTPGGKDHWS  242
              RF+GY ++ +G+L + PEEAE ++RIYR +L+G +  GI++ L +DGI T++GK +W 
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  243  ISTVKSILGNEKYKGDALLQKSYTVDYLTKKTKVNEGEIPQYYVEGDHEAIIAPETFDLV  302
              +VK IL NEKY GDALLQK+ TVD+LTKK   NEG++PQYYVE  HEAII+ E F   
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  303  QREMKKRGNGIMYHSGV---HVFSSKIR------CGQCGSFYGSKVWHSNSKYRKTIWRC  353
            Q E+ +R+N  +Y +     +++SSK        CG+CG +Y    W+ +++ +  +WRC
Sbjct  302  QEEIHRRSN--IYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRC  358

Query  354  NHKYD-GCKKCTTPAIDDSEVKTAFLSAVNKLLETKAEVI  392
              + + G   C   ++ + E+  A ++A+NKLL    ++I
Sbjct  359  VTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMI  398

83) CKL_3840 in NC_009706


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  309 bits (1157),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 206/448 (46%), Positives = 306/448 (69%), Gaps = 12/448 (2%)

Query  10   QKRVDIIPANILLTKPNARKR--KLRVAAYCRVsteqeeqqssyaaqiayytDKISKNKD  67
            +K + +IPA   +    A+ +  KLRVAAYCRVSTE EEQ+SSY  Q++ YT+ I KN++
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  68   WELAGIFADEGITGTSAKKRTEFLKLMVLCEKGKVDMVLTKSVSRFSRNTLDAIGYIRKL  127
            WE+AGIFAD+GI+GT++KKR EF +++  C  G++DMV+TKS+SRF+RNTLD + YIR+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  128  KAKGIPIIFEKEGINTMEMASEMALCFLSGFAQAESESISRNVTWGKRQSFKSGKVPFQY  187
            K K I++ FEKE INT +  +E+ L +++++AQ ES+S+S+NV  G +  ++ GKV  + 
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  188  SRLLGYEKGEDGQPKIVPDEAEIVKRIFRSYYSGASVRTIKESLEADNILSPTGKQEWSV  247
             R++GY K+EDG+  IVP+EAEI+KRI+R Y  G S+  I  +LE D IL+++GK  W  
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  248  GVLQYMLRNERYIGDALLQKTYVADCLTKETRKNNGEIPQYYVTGNHEPIISKDLFNLVQ  307
              ++ +L+NE+YIGDALLQKT   D LTK   KN+G++PQYYV  +HE+II+K+LF   Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  308  EEIarragkrkvakkavktekgkYSSKYALTELLCCGDCGTQYRRVTWARNGKKKVVWRC  367
            EEI     +R     +   +K  YSSKYAL+ +  CGDCG  YRRV W  +G+K  VWRC
Sbjct  303  EEI----HRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  368  INRLEYGTKYCKESPTIEESRLHQAIVTALNRLDEDKADVIETLKAGLRLAIGTQDDDSF  427
            + R+E G   CK+  T+ E  L  A++TA+N+L  +  ++I TL   ++  IG  +   +
Sbjct  359  VTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIG--ETTEY  415

Query  428  NEAAVKNRIAELQSVMMDLVELSSKSSA  455
            + + ++N + E Q    +L+ L++K+  
Sbjct  416  QISEINNSLEEKQ---KELIKLANKGQD  440

84) HMPREF0573_11203 in NC_014246


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  304 bits (1141),  Expect = 7e-84, Method: Compositional matrix adjust.
 Identities = 178/411 (44%), Positives = 280/411 (69%), Gaps = 16/411 (3%)

Query  4    ITTIPATKPLHSTTTTISGQQLRRVAGYARVSTDDTDQANSYEAQVDYYEHYIKNHDGWQ  63
            I  IPA K + ST++    ++LR VA+Y RVST+  +Q +SYE QV  Y ++IK+++ W+
Sbjct  6    IMVIPARKRVGSTAAKEKIKKLR-VAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWE  64

Query  64   FVAIYTDEGISGTSTKHREGFNRMIADALSGRIDLIVTKSVSRFARNTVDSLTTVRKLKD  123
            F +I++D+GISGT+TK R+ FNRMIA+ + G ID+++TKS+SRFARNT+D L  +R+LKD
Sbjct  65   FAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKD  124

Query  124  KGVEVFFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGHRKRFQDGKVYMPYGN  183
            K + V+FEKENI T D+KGE+L+TIM+SLAQ+ES+S+S+NV  G + R+Q+GKV +    
Sbjct  125  KNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKR  184

Query  184  FLGYDRGENGEPVINPEQAETVRRIYRQYLEGMSIPQIAASLDADGILTPRRKHKWSHTT  243
            F+GY ++E+G+  I PE+AE ++RIYR+YLEG S+  I+ +L+ DGILT+  K +W   +
Sbjct  185  FMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPES  244

Query  244  IHSILTNEKYKGDALLQKRFTVDFLTKQRKANEGEVPQYYVTGSHPAIIDPETWELVHYE  303
            +  IL NEKY GDALLQK  TVDFLTK+R  NEG+VPQYYV  SH AII  E     + E
Sbjct  245  VKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEE  304

Query  304  LAKNTN----QGRRERAF------TGMVYCTHCGSAYGSKTWHSTDKYRAIIWQCNHKFS  353
            + + +N    +G+  R +      +++ +C +CG  Y    W+  ++ + ++W+C  ++ 
Sbjct  305  IHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTRIE  363

Query  354  -TPHPAKMPILRDNQLQTIFQTALAQIIEQRGLIDWKL---LQTILTDTSE  400
              P+  K   +++++L     TA+ +++     +   L   +++++ +T+E
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTE  414

85) Acin_1875 in NC_016077


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  304 bits (1141),  Expect = 7e-84, Method: Compositional matrix adjust.
 Identities = 187/439 (43%), Positives = 302/439 (69%), Gaps = 15/439 (3%)

Query  2    AKTVRAIPATISRYTSSPINSRKKRKVAGYARVSTDHDDQITSYEAQVDYYTNYIKGRDD  61
             K +  IPA     ++++ +  KK +VA+Y RVST+ ++Q +SYE QV  YT++IK  ++
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  62   WEFVGIYTDEGISGTNTRHRDGFKRMVNDALEGKIDLIITKSVSRFARNTVDSLSTIRKL  121
            WEF GI++D+GISGTNT+ RD F+RM+ + ++G+ID++ITKS+SRFARNT+D L  IR+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  122  KEHKIECYFEKENIWTFDSKGELLLTIMSSLAQEESRSISENVTWGHRKRFADGKVSVAY  181
            K+ +I  YFEKENI T D+KGE+LLTIM+SLAQ+ES+S+S+NV  G + R+ +GKV V  
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  182  SRFLGYKKGPNGGLVVVPEEATTIKLIYKLFLEGLGTTTIAKQLTKRGLKTPGGKSKWSA  241
             RF+GY K+ +G L +VPEEA  IK IY+ +LEG +   I++ L K G+ T++GK++W +
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  242  RTVYSILQNEKYKGDALLQKSYTVDFLTKKTKINEGEVPQYYVEHDHEAIIEPQTFEMVQ  301
             +V  ILQNEKY GDALLQK+ TVDFLTKK   NEG+VPQYYVE+ HEAII  + F   Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  302  AELKHRN-------KARKYFSGTSIFSTKIQCAECGGWYGAKVWHSNDKYRRIIYQCNNK  354
             E+ +R+       K ++ +S+   +S+   C++CG+ Y    W+ +++ + ++ +C  +
Sbjct  303  EEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTR  361

Query  355  F-RNKTGCRTPHLTEEEIKAYFVRAMNQIIADKDEIIQTIEDARQVICDN------GDLL  407
            + +    C+   + E+E+ +  + A+N+++A+ +++I+T+E+  + + ++      +++ 
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEIN  421

Query  408  AKRDAMQKEIGILVEMAQN  426
               +  QKE+  L + +Q+
Sbjct  422  NSLEEKQKELIKLANKGQD  440

86) btf_176 in NC_020387


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  301 bits (1126),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 197/484 (41%), Positives = 315/484 (66%), Gaps = 19/484 (3%)

Query  1    MSNKNVTVIPAKPTGFMQGLPGLITKRKVAGYARVSTDKDEQQNSYEAQVEYYTDYIKRN  60
            M++KN+ VIPA+      +    I K +VA+Y RVST+ +EQ++SYE QV  YT++IK+N
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PEWEFVEVYTDEGISGTSTKHREGFKRMIADALDGKIDLILTKSVSRFARNTVDSLTTIR  120
             EWEF  +++D+GISGT+TK R+ F+RMIA+ +DG+ID+++TKS+SRFARNT+D L  IR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  QLKDKGTEVYFEKENIFTMDSKGELLLTIMSSLAQEESRSISKNITWGKRKSMADGKVSF  180
            QLKDK   VYFEKENI T D+KGE+LLTIM+SLAQ+ES+S+S+N+  G +    +GKV  
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  AYSSFLGYDMGADGHLYIVEDQAKIVHRIYDEFLAGKTTYDIAVRLTEDGIPTPMNKVKW  240
                F+GY  + DG+L IV ++A I+ RIY E+L G++  +I+  L  DGI T+  K +W
Sbjct  181  NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW  240

Query  241  QASTVSNILQNVKYRGDSILQQYFVEDFLTKKIKKNTGELPLYYVSQNHPPIIPPEKFEM  300
            ++ +V +ILQN KY GD++LQ+    DFLTKK  KN G++P YYV ++H +IIP E F  
Sbjct  241  RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ  300

Query  301  VQEEFRRR--------KEGGPYTCISPFSGRIVCGNCGGFYGRKVWHSGSSYQSFVWHCN  352
             QEE++RR        K+   Y+   ++S+   CG+CG++Y R  W+  +  + FVW+C 
Sbjct  301  AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCV  359

Query  353  NKFTK-RKYCSTPSVKEDAIMKCFVDAFNNLIARKDEIARNYEECL-AAITDDSAYKTRL  410
             ++ +    C   +VKED +    + A+N+L+A  +++ +  EE + A I + + Y    
Sbjct  360  TRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEY----  415

Query  411  AEVENLSAGLATRMHD--NLTRESRMMDDCGED-SPIKKERDEITVEYEALQKEHKELNS  467
             ++ +++ +L  +  +  +L+  ++  D+ +++   ++  R+ + VE  +L  E+  +N 
Sbjct  416  -QISEINNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINE  474

Query  468  KIAL  471
             I +
Sbjct  475  LIEF  478

87) Rumal_3820 in NC_014825


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  301 bits (1128),  Expect = 7e-83, Method: Compositional matrix adjust.
 Identities = 215/534 (41%), Positives = 348/534 (66%), Gaps = 20/534 (3%)

Query  7    AASNVKIIPAMS--SEELKQAKYRQTRVAAYCRVSTDHEEQANSYKVQIDYYTNLINSNS  64
            +  N+ +IPA    +    + K ++ RVAAYCRVST+ EEQ +SY VQ+  YT++I+ N+
Sbjct  2    TEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNN  61

Query  65   EWTMAGIYADEGISGTQTKNRKEFNKMIRKCRQKKIDLVLCKSISRFARNTVDCLEYIRE  124
            EW  AGI+AD+GISGT+TK+R EFN+MI  C + +ID+V+ KSISRFARNT+DCL+YIR+
Sbjct  62   EWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQ  121

Query  125  LRLLGIGVIFEKENINTLAMNSEFIISLYGSFAQAESESISKNVSWGIEKSFKEGKVKYV  184
            L+   I+V FEKENINT   ++E ++++ +S+AQ ES+S+S+NV  G++  +++GKV+  
Sbjct  122  LKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVN  181

Query  185  MDKTLGYRMGEDGKPyiveeeaeivrriyrMFLDGLSMQRIADIMQAEGAARRSGCTTWN  244
              + +GY  +EDG+  IV EEAEI++RIYR +L+G S+  I+  ++ +G    +G   W 
Sbjct  182  HKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  245  RSNVNYILKNEKYAGDAILQKSYTIDCITHKRVKNNGEKNKYILHDCHPAIIDRDTYNRT  304
              +V+ IL+NEKY GDA+LQK+ T+D +T KRVKN+G+  +Y +++ H AII ++ + ++
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  305  QQELTRRCTIKQRSDKAVTAQGRYASKYALTDIMICGECGTPYRRVVWNSHGKKLPVWRC  364
            Q+E+ RR  I    +K       Y+SKYAL+ I +CG+CG  YRRV WN HG+K  VWRC
Sbjct  302  QEEIHRRSNIYTGEGKNKRI---YSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRC  358

Query  365  INRLDHGNRYCKHSPSLNEEHLQQAIIDAINTAYTHNTAFLQSMENNISIVLNDEDKNNT  424
            + R+++G   CK+  +++E++L  A++ AIN   +     ++++E+NI  V+   +  + 
Sbjct  359  VTRIEQGPEVCKN-RTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIG--ETTEY  415

Query  425  ERVRIESRLAEIDKARDDLIHLVTSGSVGEDSLDKEFEALNDEESYLKTQLEAMKSQTEK  484
            +   I++ L E +K   +LI L   G  + D L  E++ L D    L  +  ++ ++ E+
Sbjct  416  QISEINNSLEEKQK---ELIKLANKGQ-DYDHLADEIDELRDKRQILLVEDASLSGENER  471

Query  485  RDEVRYSIMSAVEGIGEMENTMVDYDEVAVRKMIECIKVLSKTEILIIFKGGYE  538
             +E+       +E I       ++YD+  VRK+I+ + V    +++I FK+G E
Sbjct  472  INEL-------IEFIRKNKFRTLEYDDKLVRKIIQSVTVYE-GHFVIAFKSGIE  517

88) CKR_3390 in NC_011837


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  298 bits (1116),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 197/422 (47%), Positives = 292/422 (70%), Gaps = 10/422 (2%)

Query  1    MAAYCRVsteqeeqqssyaaqiayytDKISKNKDWELAGIFADEGITGTSAKKRTEFLKL  60
            +AAYCRVSTE EEQ+SSY  Q++ YT+ I KN++WE+AGIFAD+GI+GT++KKR EF ++
Sbjct  29   VAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRM  88

Query  61   MVLCEKGKVDMVLTKSVSRFSRNTLDAIGYIRKLKAKGIPIIFEKEGINTMEMASEMALC  120
            +  C  G++DMV+TKS+SRF+RNTLD + YIR+LK K I++ FEKE INT +  +E+ L 
Sbjct  89   IAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLT  148

Query  121  FLSGFAQAESESISRNVTWGKRQSFKSGKVPFQYSRLLGYEKGEDGQPKIVPDEAEIVKR  180
            +++++AQ ES+S+S+NV  G +  ++ GKV  +  R++GY K+EDG+  IVP+EAEI+KR
Sbjct  149  IMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKR  208

Query  181  IFRSYYSGASVRTIKESLEADNILSPTGKQEWSVGVLQYMLRNERYIGDALLQKTYVADC  240
            I+R Y  G S+  I  +LE D IL+++GK  W    ++ +L+NE+YIGDALLQKT   D 
Sbjct  209  IYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDF  268

Query  241  LTKETRKNNGEIPQYYVTGNHEPIISKDLFNLVQEEIarragkrkvakkavktekgkYSS  300
            LTK   KN+G++PQYYV  +HE+II+K+LF   QEEI     +R     +   +K  YSS
Sbjct  269  LTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEI----HRRSNIYTGEGKNKRIYSS  324

Query  301  KYALTELLCCGDCGTQYRRVTWARNGKKKVVWRCINRLEYGTKYCKESPTIEESRLHQAI  360
            KYAL+ +  CGDCG  YRRV W  +G+K  VWRC+ R+E G   CK + T+ E  L  A+
Sbjct  325  KYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCK-NRTVKEDELYGAV  383

Query  361  VTALNRLDEDKADVIETLKAGLRLAIGTQDDDSFNEAAVKNRIAELQSVMMDLVELSSKS  420
            +TA+N+L  +  ++I TL   ++  IG  +   ++ + ++N + E Q    +L+ L++K+
Sbjct  384  MTAINKLLAGGNNMIKTLEENIHAVIG--ETTEYQISEINNSLEEKQ---KELIKLANKG  438

Query  421  SA  422
              
Sbjct  439  QD  440

89) ES1_04570 in NC_021043


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  296 bits (1109),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 190/403 (48%), Positives = 273/403 (68%), Gaps = 12/403 (2%)

Query  2    AKVVTTIPATLSRFTAASINSKKKRRVAAYARVSTDHEEQLTSYEAQVDYYTNYIKGRDD  61
             K +  IPA     ++A+ +  KK RVAAY RVST+ EEQ +SYE QV  YT++IK  ++
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  62   WEFVGVYTDEGITGTNTKKREGFKRMVADALAGKIDLIITKSVSRFARNTVDSLTTIRSL  121
            WEF G+++D+GI+GTNTKKR+ F+RM+A+ + G+ID++ITKS+SRFARNT+D L  IR L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  122  KEHNVECYFEKENIWTFDGKGELLLTIMSSLAQEESRSISENCTWGQRKRFADGKVTVPF  181
            K+ N+  YFEKENI T D+KGE+LLTIM+SLAQ+ES+S+S+N   G + R+ +GKV V  
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  182  KRFLGYDMGPDHNLVINPEQAKLVKRIYGMFLQGQSPFQIARILTEEGILSPGGKNHWNP  241
            KRF+GY  + D NL I PE+A ++KRIY  +L+GQS   I+R L  +GIL+++GK +W P
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  242  SNIKSILTNEKYKGDALLQKSFTVDFLTTKKKANEGEIPQYYVKDNHEAIIDPETFEMVQ  301
             ++K IL NEKY GDALLQK+ TVDFLT K+  NEG++PQYYV ++HEAII  E F   Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  302  TLMATRKR-----GWNRkssvs--ifsskikCGDCGSWYGPKVWHSNDAYRKT-IWQCNH  353
              +  R       G N++   S   +S+   CGDCG  Y    W+ ++  RK  +W+C  
Sbjct  303  EEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHG--RKEFVWRCVT  360

Query  354  KFD--GQKCATPTLTEEEIKELFLRAANQVIDQKDQFISVYEQ  394
            +++   + C   T+ E+E+    + A N+++   ++ I   E+
Sbjct  361  RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEE  403

90) ACL_0580 in NC_010163


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  295 bits (1106),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 180/411 (44%), Positives = 282/411 (69%), Gaps = 3/411 (0%)

Query  1    MKNKTVRIIQPKTHYTLDQINNPITRKRVCAYVRVSTDNLEQKTSYEAQRDEYTQRITKN  60
            M +K + +I ++ +      ++ I + RV AY RVST+  EQ++SYE Q  +YT+ I KN
Sbjct  1    MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN  60

Query  61   PDWIFDGIYADEGISGTSTKNRKQFNLMIEKARAGQIDIILTKSISRFARNTVDALNYIR  120
             +W F GI+AD+GISGT+TK+R +FN MI     G+ID+++TKSISRFARNT+D L+YIR
Sbjct  61   NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR  120

Query  121  ELRQINVEIIFEKENISSLDPKVEFLLTIMSSMAQEEARNVSENVKWNVQRRFREGVPII  180
            +L++ N+ + FEKENI++ D+K E LLTIM+S+AQ+E++++S+NVK  +Q R+++G   +
Sbjct  121  QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV  180

Query  181  NHKRFLGYTKDKKGGNLVVVPEEAQIVKLIFNLYISGVGPAKIAKQLIEMGAKTGAGKTE  240
            NHKRF+GYTKD  +GNL +VPEEA+I+K I+  Y+ G +   I++ L   G  T+AGK  
Sbjct  181  NHKRFMGYTKD-EDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPR  239

Query  241  WRLSTITTILKNEKYMGDMLQQKTISIDYLSHTRVKNKNHAPTYYTENSHEAIIDRDTFE  300
            WR  ++  IL+NEKY+GD L QKT+++D+L+  RVKN  H P YY ENSHEAII ++ F 
Sbjct  240  WRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFL  299

Query  301  LAQRIRKDRAKVRIGEDKNLSKYSRTYPLTAMIICSECGRTLKRRYWNYGKPSQRVMQQC  360
             AQ     R+++  GE+KN   YS  Y+L+A+ +C++CG   +R YWN     +  + +C
Sbjct  300  QAQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNI-HGRKEFVWRC  358

Query  361  GSYIE-GKANCNAKASHQDLIEATTIHMLNKVFLKDLDIMSTIQRIIKSTI  410
             + IE G   C+ ++  +D + ++ +  +NK++  + +++ T++  I + I
Sbjct  359  VTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVI  409

91) SSUJS14_0687 in NC_017618


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  294 bits (1101),  Expect = 8e-81, Method: Compositional matrix adjust.
 Identities = 183/378 (49%), Positives = 272/378 (72%), Gaps = 10/378 (2%)

Query  1    MSTDQEEQLSSYENQVNYYREFISKHEDYELVDIYADEGISATNTKKRDAFNRLIQDCRA  60
            +ST+ EEQ SSYE QV+ Y EFI K+++ E+ +I+AD+GIS+TNTKKRD FNR+I +C  
Sbjct  35   VSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRMIAECMD  94

Query  61   GKVDRILVKSISRFARNTLDCIKYVRELKELGVGVSFEKENIDSLDSKGEVLLTILSSLA  120
            G++D ++ KSISRFARNTLDC++Y+R+LK+  ++V FEKENI++ D+KGEVLLTI++SLA
Sbjct  95   GNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLA  154

Query  121  QDESRSISENATWGIRKKFERGEVRVNTTKFMGYDKDDNGRLIINPQQAETVKFIYEKFL  180
            Q+ES+S+S+N   G++ ++++G V+VN  +FMGY KD++G L I P++AE +K IY  +L
Sbjct  155  QQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYL  214

Query  181  DGYSPESIAKYLNDNEIPGWTGKANWYPSAIQKMLQNEKYKGDALLQKTITVDFLTKKRV  240
            +G S  +I++ L+ + I   +GK+ W P +++K+LQNEKY GDALLQKT+TVDFLTKKRV
Sbjct  215  EGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRV  274

Query  241  QNDGQVNQYYVENSHEAIIDKDTWELVQLELERR-KAYREEHQLKSYIMQNDDNPFTTKV  299
            +N+G+V QYYVENSHEAII K+     Q E++RR + Y  E + K   + +   ++++  
Sbjct  275  KNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKR--IYSSKYALSAIT  332

Query  300  FCAECGSAFGRKNWATSRGKRKVWQCNNRYRVKGQIGCQNNHIDEETLEKAVVIAVE-LL  358
            FC++CG  + R  W     K  VW+C  R   +G   C+N  + E+ L  AV+ A++ LL
Sbjct  333  FCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE-QGPEVCKNRTVKEDELYGAVMTAINKLL  391

Query  359  SENVDLLHGKWNKILEEN  376
            +   +++     K LEEN
Sbjct  392  AGGNNMI-----KTLEEN  404

92) NJAUSS_0662 in NC_020526


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  294 bits (1101),  Expect = 8e-81, Method: Compositional matrix adjust.
 Identities = 183/378 (49%), Positives = 272/378 (72%), Gaps = 10/378 (2%)

Query  1    MSTDQEEQLSSYENQVNYYREFISKHEDYELVDIYADEGISATNTKKRDAFNRLIQDCRA  60
            +ST+ EEQ SSYE QV+ Y EFI K+++ E+ +I+AD+GIS+TNTKKRD FNR+I +C  
Sbjct  35   VSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRMIAECMD  94

Query  61   GKVDRILVKSISRFARNTLDCIKYVRELKELGVGVSFEKENIDSLDSKGEVLLTILSSLA  120
            G++D ++ KSISRFARNTLDC++Y+R+LK+  ++V FEKENI++ D+KGEVLLTI++SLA
Sbjct  95   GNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLA  154

Query  121  QDESRSISENATWGIRKKFERGEVRVNTTKFMGYDKDDNGRLIINPQQAETVKFIYEKFL  180
            Q+ES+S+S+N   G++ ++++G V+VN  +FMGY KD++G L I P++AE +K IY  +L
Sbjct  155  QQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYL  214

Query  181  DGYSPESIAKYLNDNEIPGWTGKANWYPSAIQKMLQNEKYKGDALLQKTITVDFLTKKRV  240
            +G S  +I++ L+ + I   +GK+ W P +++K+LQNEKY GDALLQKT+TVDFLTKKRV
Sbjct  215  EGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRV  274

Query  241  QNDGQVNQYYVENSHEAIIDKDTWELVQLELERR-KAYREEHQLKSYIMQNDDNPFTTKV  299
            +N+G+V QYYVENSHEAII K+     Q E++RR + Y  E + K   + +   ++++  
Sbjct  275  KNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKR--IYSSKYALSAIT  332

Query  300  FCAECGSAFGRKNWATSRGKRKVWQCNNRYRVKGQIGCQNNHIDEETLEKAVVIAVE-LL  358
            FC++CG  + R  W     K  VW+C  R   +G   C+N  + E+ L  AV+ A++ LL
Sbjct  333  FCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE-QGPEVCKNRTVKEDELYGAVMTAINKLL  391

Query  359  SENVDLLHGKWNKILEEN  376
            +   +++     K LEEN
Sbjct  392  AGGNNMI-----KTLEEN  404

93) Arch_1214 in NC_014218


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  292 bits (1093),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 174/388 (45%), Positives = 267/388 (69%), Gaps = 13/388 (3%)

Query  4    ITTIPATKPLHSTTTTISSQQLRRVASYARVSTDDADQANSYEAQVDYYEHYIKNHDGWQ  63
            I  IPA K + ST++    ++LR VA+Y RVST+  +Q +SYE QV  Y ++IK+++ W+
Sbjct  6    IMVIPARKRVGSTAAKEKIKKLR-VAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWE  64

Query  64   YVDIYTDEGISGTSTKHREGFNHMIADALSGKIDLIVPKSVSRFARNTVVSLTTVRKLKD  123
            + +I++D+GISGT+TK R+ FN+MIA+ + G+ID+++ KS+SRFARNT+  L  +R+LKD
Sbjct  65   FAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKD  124

Query  124  KGVEVFFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGHRKRFQDGKVYLPYGN  183
            K + V+FEKENI T D+KGE+L+TIM+SLAQ+ES+S+S+NV  G + R+Q+GKV +    
Sbjct  125  KNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKR  184

Query  184  FLGYDRGPDGNPVINPEQAETVRRIYRQYLEGMSIPQIAAALDADGIPTPMRKAKWSHST  243
            F+GY ++ DGN  I PE+AE ++RIYR+YLEG S+  I+ AL+ DGI T+  K++W   +
Sbjct  185  FMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPES  244

Query  244  IHSILTNEKYKGDALLQKSFTVDFLTKAVKTNEGEVPQYYVTDSHPAIIDPETWELVRYE  303
            +  IL NEKY GDALLQK+ TVDFLTK    NEG+VPQYYV +SH AII  E     + E
Sbjct  245  VKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEE  304

Query  304  LAENTN----QGRRERAF------TGIVYCTHCGAAYGSKTWHSTDKYKTIIWQCNQKFA  353
            +   +N    +G+  R +      ++I +C +CG  Y    W+  ++ K ++W+C  ++ 
Sbjct  305  IHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTRIE  363

Query  354  I-PHPKKMLVLRDNQLQTIFQTALSNLF  380
              P+  K   +++++L     TA+++L+
Sbjct  364  QGPEVCKNRTVKEDELYGAVMTAINKLL  391

94) CXIVA_07110 in NC_015737


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  292 bits (1094),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 216/539 (41%), Positives = 346/539 (65%), Gaps = 40/539 (7%)

Query  3    RQVKKIPATISRFTAAPINSKTKR-RVAGYARVSTDHEDQTTSYAAQVDYYTNYIKGHED  61
            +++  IPA   R  +++ + K K+ RVA+Y RVST+ E+Q +SY  QV  YT++IK +++
Sbjct  4    KNIMVIPAR-KRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  62   WEFAGIYTDEGISATNTKKREGFRHMISDALDGKIDLIVTKSVSRFARNTVDSLTTIREL  121
            WEFAGI++D+GIS+TNTKKR+ F +MI++ +DG+ID+++TKS+SRFARNT+D L  IR+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  122  KEKGVECYFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGQRKRMADGKVSFAY  181
            K+K +  YFEKENI T D+KGE+L+TIM+SLAQ+ES+S+S+NV  G + R  +GKV    
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  182  SRFLGLDKDKETGKIVVNQEQAKTVRLIFRLFLEGLTPNAIAKELTNRGIKTPSGKDVWN  241
             RF+G  KD E G++ +  E+A  ++ I+R +LEG +  +I++ L + GI T++GK  W 
Sbjct  183  KRFMGYTKD-EDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWR  241

Query  242  QSTVRRMLSNEKYKGDALLQKEFTVDFLQKKMKKNEGEVPQYYVEGNHEAIISPQVFDLV  301
              +V+++L NEKY GDALLQK  TVDFL KK  KNEG+VPQYYVE +HEAII+ ++F   
Sbjct  242  PESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQA  301

Query  302  QTELERRKH-----GRSR--YSGISIFSSKIKCADCGGWYGSKVW--HSRDKYRKEVYRC  352
            Q E++RR +     G+++  YS+   +S+   C+DCG+ Y    W  H+R  +   V RC
Sbjct  302  QEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEF---VWRC  358

Query  353  NSKYE--GEKCQTPFVTKEDVKAAFVSAYNKLVKEKKEILANAQLIRKTLCDTGSLQEEK  410
             ++ E   E C+   V  +++ +A ++A NKL+       +  ++I+       +L+E+ 
Sbjct  359  VTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLA------GGNNMIK-------TLEENI  405

Query  411  NRLENELS--VIVEMTDSLVA---ENARIAQNQNDYQKKYDDLVRRYDEKKQRYDEVTDR  465
            + +  E +   I E+ +SL     E  ++A++ +DY+   D+ +    +K+Q        
Sbjct  406  HAVIGETTEYQISEINNSLEEKQKELIKLANKGQDYDHLADE-IDELRDKRQILLVEDAS  464

Query  466  IRKKETQSERLAEFIRELKSRKGVIAEFDDALWGSMVEYVTVHRDGKISVTFRNGTEIE  524
            +   + + + L EFIR  K R     E+DD L   +++ VTV  +G + ++F++G E+E
Sbjct  465  LSGENERINELIEFIRKNKFRT---LEYDDKLVRKIIQSVTVY-EGHFVIAFKSGIEME  519

95) Acin_1311 in NC_016077


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  289 bits (1083),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 215/535 (41%), Positives = 337/535 (63%), Gaps = 35/535 (6%)

Query  2    AKTVRAIPATISRYTAAPINSRKKRRVAGYARVSTDHDDQISSYEAQVDYYTNYIRERDD  61
             K +  IPA     ++A+ +  KK RVA+Y RVST+ ++Q SSYE QV  YT++I+  ++
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  62   WEFVGIYTDEGISATNTRHRDGFKRMVRDAMDGKIDLIVTKSVSRFARNTVDSLTTVRKL  121
            WEF GI++D+GIS+TNT+ RD F+RM+ + MDG+ID+++TKS+SRFARNT+D L  +R+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  122  KDKGIEIYFEKENIWTLDAKGELLITIMSSLAQEESRSISENVTWGHRKRFADGKVCVPF  181
            KDK I +YFEKENI T DAKGE+L+TIM+SLAQ+ES+S+S+NV  G + R+ +GKV V  
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  182  GHFLGYDRGPDGNLVVNREQAKTVKLIYRLFLDGYTFHSIARELTSRGLETPARKKRWYP  241
             +F+GY ++ DGNL +  E+A  +K IYR +L+G ++ +I+R L   G+ T+A K RW P
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  242  GTVESILTNEKYKGDALLQKRFTVNFLTKETKANEGEVPQYYVENNHEAIISPQVFDWVQ  301
             +V  IL NEKY GDALLQK  TV+FLTK    NEG+VPQYYVEN+HEAII+ ++F   Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  302  EEIKrrregrgrYSGVS----IFSSKIK------CGQCGGWYGAKVWHSTDKYRRTIYRC  351
            EEI         Y+G +    I+SSK        CG+CG+ Y    W+  ++ +  + RC
Sbjct  303  EEIH---RRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRC  358

Query  352  NDKFKSH---CKTPHLTEDDIKEAFVRAVNQLIENKADVLDSItllkerltdtedleeer  408
              ++      CK   + ED++  A + A+N+L+    +++ ++    E   ++   E   
Sbjct  359  VTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTL----EENIHAVIGETTE  414

Query  409  drISTDLNLLADKIQQLIAENARVAQNQDDYDR---NYNELVSRYEAAKTQYDKTCEAIQ  465
             +IS   N L +K ++LI    ++A++ +DYD+   + +EL  + +    +         
Sbjct  415  YQISEINNSLEEKQKELI----KLANKGQDYDHLADEIDELRDKRQILLVEDASLSGE--  468

Query  466  YRKARSRQMDSFIKELRNQDLIKEFDARLWGSLVDFITVYSKDDIRVTFKDGTEI  520
              + R  ++  FI+  + + L  E+D +L   +++ +TVY  +++ ++FK G E+
Sbjct  469  --NERINELIEFIRKNKFRTL--EYDDKLVRKIIQSVTVYE-GHFVIAFKSGIEM  518

96) SeseC_00920 in NC_017582


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  285 bits (1066),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 178/367 (49%), Positives = 261/367 (72%), Gaps = 5/367 (1%)

Query  1    MSTDQDEQLSSYENQVRYYRDYILKHEDYELVDIYADEGISATNTKKRDAFNRLIQDCRA  60
            +ST+ +EQ SSYE QV  Y ++I K+++ E+ +I+AD+GIS+TNTKKRD FNR+I +C  
Sbjct  35   VSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNRMIAECMD  94

Query  61   GKVDRILVKSISRFARNTLDCIKYVRELKELGIGVTFEKENIDSLDSKGEVLLTILSSLA  120
            G++D ++ KSISRFARNTLDC++Y+R+LK+  I+V FEKENI++ D+KGEVLLTI++SLA
Sbjct  95   GNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLA  154

Query  121  QDESRSISENSTWGIRKKFERGIVQVNTTKFMGYDKDENGRLVINPEQAEVVKYIYSQFL  180
            Q+ES+S+S+N   G++ ++++G VQVN  +FMGY KDE+G L I PE+AE++K IY ++L
Sbjct  155  QQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYL  214

Query  181  KGYSPESIAKELNAKDIKGWSGKANWYPSSILKMLQNEKYKGDALLQKTYTVDFLTKKRI  240
             G S  +I++ L+  +I   +GK+ W P S+ K+LQNEKY GDALLQKT TVDFLTKKR+
Sbjct  215  EGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRV  274

Query  241  QNDGQVNQYYVEDSHEGIIDEETWETIQLEIARR-KIYREEHQLKSYIMQSEDNPFTTKV  299
            +N+G+V QYYVE+SHE+II  E     Q EI RR +IY  E + K   + S   ++++  
Sbjct  275  KNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEGKNKR--IYSSKYALSAIT  332

Query  300  YCKACGSAFGRKNWTTSRGKRKVWQCNNRYRIKGVEGCNSRHLDEATLEQIFIKALE-LL  358
            +C  CG  + R  W     K  VW+C  R   +G E C++R + E  L    + A++ LL
Sbjct  333  FCGDCGDIYRRVYWNIHGRKEFVWRCVTRIE-QGPEVCKNRTVKEDELYGAVMTAINKLL  391

Query  359  SENIDLL  365
            +   +++
Sbjct  392  AGGNNMI  398

97) Acin_1945 in NC_016077


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  284 bits (1062),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 210/515 (41%), Positives = 333/515 (65%), Gaps = 35/515 (6%)

Query  5    KKRRVAGYARVSTDHDEQLTSYEAQVDYYTRYIQSRNDWEFVGIYTDEGISATNTKHREG  64
            KK RVA+Y RVST+ +EQ +SYE QV  YT +I+  N+WEF GI++D+GIS+TNTK R+ 
Sbjct  25   KKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDE  84

Query  65   FKRMIADAIAGKIDLIITKSVSRFARNTVDSLTTVRKLKDKGIEIYFEKENIWTLDAKGE  124
            F+RMIA+ + G+ID++ITKS+SRFARNT+D L  +R+LKDK I +YFEKENI T DAKGE
Sbjct  85   FNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGE  144

Query  125  LLITIMSSLAQEESRSISENVTWGHRKRFADGKVSLAFTHFLGYDKGMDGNLVVNKKQAE  184
            +L+TIM+SLAQ+ES+S+S+NV  G + R+ +GKV +   +F+GY K+ DGNL +   +AE
Sbjct  145  VLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAE  204

Query  185  IVKLIYRLYLNGYTFHSIAKELTERKIPTPAGCKIWRANTIRSILMNEKYKGDALLQKKI  244
            I+K IYR YL+G ++ +I++ L    I T+AG   WR+++++ IL NEKY GDALLQK +
Sbjct  205  IIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTV  264

Query  245  TVDFLTKETKKNEGEVPQYYVEHNHEAIISPQVFDWVQEEIkrrrkrkkrYSGVS----I  300
            TVDFLTK   KNEG+VPQYYVE++HEAII+ ++F   QEEI   ++R + Y+G +    I
Sbjct  265  TVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEI---HRRSNIYTGEGKNKRI  321

Query  301  FSSKIK------CGQCGGWYGAKVWHSTDKYRRTIYRCNDKFKNH---CQTPHLTENEIK  351
            +SSK        CG+CG+ Y    W+  ++ +  + RC  ++ +    C+   + E+E+ 
Sbjct  322  YSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTRIEQGPEVCKNRTVKEDELY  380

Query  352  GAFIRAVNQLIENKEDILSNITMLKKRLTDTASLEKERDALELDLNMLTDQVQQLIAENA  411
            GA + A+N+L+   +++   I  L   +    +   E +  E++ N L ++ ++LI    
Sbjct  381  GAVMTAINKLLAGGNNM---IKTLEENIHAVIGETTEYQISEIN-NSLEEKQKELIKLAN  436

Query  412  QVAQDQDEYGRKYNGLVSRYEETKKKYDQV---CDAIQQCVDRYWKLDNFMKNLQKQNLV  468
            +        G+ Y+ L    +E + K + +     ++    +R   L +F+++ + + L 
Sbjct  437  K--------GQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIRKNKFRTL-  487

Query  469  YEFDERLWCSLVDFIIVYSKVKIQIVFKNGTKIHV  503
             E+D++L   +++ + VY    + I FK+G  +++
Sbjct  488  -EYDDKLVRKIIQSVTVYE-GHFVIAFKSGIEMEI  520

98) SANR_1327 in NC_022239


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  274 bits (1025),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 187/437 (43%), Positives = 296/437 (68%), Gaps = 23/437 (5%)

Query  15   KRTASGCVERSIK--RVAAYCRVSTDTEDQINSYNSQVEHYTDFIKQNNEWTLAGIYADE  72
            KR +S      IK  RVAAYCRVST+TE+Q +SY+ QV HYT+FIK+NNEW +AGI+AD+
Sbjct  13   KRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADD  72

Query  73   AITGTQVDRRIDFQRLINDCMNGDIDMVITKSISRFARNTLDTLKYVRKLKEYNVAVFFE  132
            +I+GT+  +R +F+R+I +CM+G+IDMVITKSISRFARNTLD L+Y+R+LK+ N++V+FE
Sbjct  73   GISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFE  132

Query  133  EENINTLTMDGELLLTILSSVAQQEVENISANVKKGLRMKMERGEM-VGFQGCLGYDYDP  191
             ENINT    GE+LLTI++S+AQQE +++S NVK GL+ + ++G + V  +  +GY  D 
Sbjct  133  KENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE  192

Query  192  ETKSISVNEKEAEIVRYIFRRYLEGVGGMVISRELEEQGYLSPRGHKRWTETTVLGIIKN  251
            +  ++++   EAEI++ I+R YLEG + + I+R LE +G L++ G  RW   +V  I++N
Sbjct  193  DG-NLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQN  251

Query  252  EKYKGDLLMGKTFTVDPISKRRLDNFGEQDKFYIENHHEPIISEEDFEKAQGIRLRRAKN  311
            EKY GD L+ KT TVD ++K+R+ N G+  ++Y+EN HE+II+ E F +AQ    RR+  
Sbjct  252  EKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRS--  309

Query  312  RNTVANNGGKREKYSRKYAFSSMLECGFCGHMLSRRNW--HSSSEYTKVIWQCVNATKNG  369
             N  + +G ++  YS KYA+S++  CG CG++  R  W  H+  E+   +W+CV    +G
Sbjct  310  -NIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEF---VWRCVTRIEQG  365

Query  370  KKYCPHSKGIEEEAIEKAFMESYRQVCHNNVEITNEFLKTVEEELK---DNSLAKDLKKI  426
               C  ++ + E+ +  A M +  ++    +   N+ +KT+EE++    +++   ++  I
Sbjct  366  PEVC-KNRTVKEDELYGAVMTAINKL----LAGGNNMIKTLEENIHAVIGETTEYQISEI  420

Query  427  SNQLDKILKKEKDLVEL  443
            +N L+    K+K+L+ L
Sbjct  421  NNSLE---EKQKELIKL  434

99) SDSE_1493 in NC_019042


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  273 bits (1021),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 164/400 (41%), Positives = 272/400 (68%), Gaps = 14/400 (3%)

Query  2    KKVITIQATPSIIRSSSDDFSLKKRRVAGYARVSTDHEDQATSYESQMRYYSEYISGRDD  61
            K+++ I A   +  +++ +  +KK RVA+Y RVST+ E+Q +SYE Q+  Y+E+I   ++
Sbjct  4    KNIMVIPARKRVGSTAAKE-KIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  62   WEFVKMYSDEGISGTNTKLRTGFKAMVEDALNGKIDLIITKSVSRFARNTVDSLTTVRQL  121
            WEF  +++D+GISGTNTK R  F+ M+ + ++G+ID++ITKS+SRFARNT+D L  +RQL
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  122  KEVGVEIYFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGLRKQFAEGKVHFPY  181
            K+  + +YFEKENI T D+KGE+L+TIM+SLAQ+ES+S+S+NV  GL+ ++ +GKV+   
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  182  TNVLGFKAGEDGAIVVDQDEAKTVRYIFQQALIGKSPYHIAKDLTEQGIPSPSGKSRWNA  241
               +G+  +EDG + +  +EA  ++ I+++ L G+S   I++ L  +GI +++GK+RW +
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  242  TTIKRMLRNEKYKGDALLQKTYTIDFLTKKKNINRGELPQYYVENNHEAIVDRETFDAVQ  301
             ++K++L+NEKY GDALLQKT T+DFLTKK+  N G++PQYYVEN+HEAI+ +E F   Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  302  QVLDAK-----GKKSSTSIFSSKLV------CGDCGHFFGSKVWHSTSKYRRVIYRCNEK  350
            + ++ +     G   +  I+SSK        CGDCG+++    W+  ++ +  + RC  +
Sbjct  303  EEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTR  361

Query  351  YN-GENRCATPHVTEKEIKQWFVLAVNQVIENKDEIIDNI  389
             + G + C    V E E+    + A+N+++   +++I  +
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTL  401

100) Arch_1578 in NC_014218


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  271 bits (1015),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 173/397 (44%), Positives = 260/397 (66%), Gaps = 9/397 (2%)

Query  2    ARTVTAIPATRALHTGAPLGQTTLRRVAGYARVSTDHEDQVTSYQAQVDYYTRYIDEHPG  61
             + +  IPA + + + A+  +    RVA+Y RVST+ E+Q +SY+ QV  YT +I  +  
Sbjct  3    EKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNE  62

Query  62   WRLAGIYTDEGITGTSMKLRAGFQSMIADALDGKIDLIITKSVSRFARNTVDSLTTVRKL  121
            W +AGI++D+GI+GT+ K R  F+ MIA+ +DG+ID++ITKS+SRFARNT+D L  +R+L
Sbjct  63   WEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQL  122

Query  122  KDAGVEVYFEKENIWTFDAKGELLITIMSSLAQEEARSISENVTWGHRKRFADGKVSVPF  181
            KD  + VYFEKENI T DAKGE+L+TIM+SLAQ+E++S+S+NV  G + R+ +GKV V  
Sbjct  123  KDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNH  182

Query  182  GNLLGYDKGEDGNLVINPKQAVTVRLIYELFLEGNSMAGIKRHLEHHGHKTAKERTTWTI  241
              ++GY K+EDGNL I P +A  ++ IY  +LEG+S+ GI R LE +G  TA  +  W  
Sbjct  183  KRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  242  TGIRNILTNEKYKGDALLQKSYTADFLTKKQVKNEGEVPQYYVTANHEPIVPTEVWDFVQ  301
             ++++IL NEKY GDALLQK+ T DFLTKK+VKNEG+VPQYYV  +HE+I+P E+    Q
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  302  AEL---ADVregrrsssrtrefsgKIK----CGQCGSWYGSKTWHSGSKYEKRVWRCNHK  354
             E+   +++  G   + R       +     CG+CG  Y    W+  ++    VWRC  +
Sbjct  303  EEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTR  361

Query  355  YS-GNEKCATPHLTDQQIKDTFTQALQQLAARSKTSI  390
               G E C    + ++++ ++   A+++L A ++  I
Sbjct  362  IEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMI  398

101) PALO_09295 in NC_021064


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  254 bits (950),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 171/403 (43%), Positives = 262/403 (66%), Gaps = 21/403 (5%)

Query  1    MSPK-VTTIPATKPLTHGNLGASARQVVK--RVAAYARVSTDMEEQQSSYAAQVDYYTRH  57
            M+ K +  IPA K +     +++A++ +K  RVAAY RVST+ EEQ+SSY  QV  YT  
Sbjct  1    MTEKNIMVIPARKRVG----STAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEF  56

Query  58   ITTHTGWQLVRVYTDEGISGTSTKHRAGFQQMITDALSGNIDLILTKSVSRFARNTVDTL  117
            I  +  W++  +++D+GISGT+TK R  F++MI++ + GNID+++TKS+SRFARNT+D L
Sbjct  57   IKKNNEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCL  116

Query  118  THVRQLKEAGVEVFFEKENIWTLDSKGELLITIMSSLAQEESRSISENVTWGHRKRFADG  177
              +RQLK+  + V+FEKENI T D+KGE+L+TIM+SLAQ+ES+S+S+NV  G + R+ +G
Sbjct  117  QYIRQLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQG  176

Query  178  KVMVPYASLLGDKKGKDGNLAIDETQAPIVRRIYADYLSGQSPKTIAATLTGEGVPTPRG  237
            KV V    ++G  K+ DGNL+I   +A I++RIY +YL GQS   I+ +L  +G+ T+ G
Sbjct  177  KVQVNHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAG  236

Query  238  KTRWSTTTIRSILTNEKYKGDAllqktfttdfltkttktNEGEVPQYYVSGNHEPIIEPA  297
            K RW   +++ IL NEKY GDALLQKT T DFLTK    NEG+VPQYYV  +HE+II   
Sbjct  237  KPRWRPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKE  296

Query  298  TWDLVQAELARRAK---PGSSSTHPFASRI---------KCGGWYGRKTWHSTSKHRRHI  345
                 Q E+ RR++     + + + ++S+           CG+ Y R  W+  ++ +  +
Sbjct  297  LFLQAQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR-KEFV  355

Query  346  WRCNSKYERST-ACTTPHLSEDQIRDAFTQALATLAPPPSQEV  387
            WRC ++ E++   C    + ED++ +A   A+  L +  ++ +
Sbjct  356  WRCVTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMI  398

102) EUR_11340 in NC_021010


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  250 bits (933),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 159/396 (41%), Positives = 252/396 (64%), Gaps = 16/396 (4%)

Query  21   RRLKVCGYARVSTGSQAQATSYTAQVEYYTEKIESNPLWEFAGVYADEGISGTNVKHRDE  80
            ++L+V +Y RVST ++ Q +SY  QV  YTE I  N  WEFAG++AD+GISGTN K RDE
Sbjct  25   KKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDE  84

Query  81   FQMMIADCEDGNIDLILTKSITRFARNTVECIQTIRKLKEIGVGIYFEKENINTLSEKSE  140
            F+ MIA+C DGNID+++TKSI+RFARNT++C+Q IR+LK+  +++YFEKENINT   K+E
Sbjct  85   FNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGE  144

Query  141  LFITILASVAQGESENISSNNRWAIQKRFQDGTYIISTPAY-GYGKDEDGNLVIIESEAE  199
            +++TI+AS+AQ ES+++S N + ++Q R+Q+G   ++   + GY KDEDGNL I+  EAE
Sbjct  145  VLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDEDGNLTIVPEEAE  204

Query  200  TVRWIYESYLNGMGVYVIAKALNQKGIPTIRGAEKWQDGVIQDILKNPIYEGDMLQQRTY  259
             +++IY  YL+G ++  I++AL++ GI T  G  +W+   ++ IL+N  Y GD L Q+T 
Sbjct  205  IIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKT-  263

Query  260  TETRFPFVRRV-NNGQRNQYLIKDSHPPIVTHE-----EAEAVRNLMAYRVDVLHMNKSD  313
                F   +RV N+G+  QY + +SH +I+  E     + E  R    Y  +    NK  
Sbjct  264  VTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIYTGEG--KNKRI  321

Query  314  YTKRYLFSGRIICGECGRTFRRQ--KIYIGKPYEKIIWTCSGHVEDKESCCM-KAIREDV  370
            Y+ +Y +S+  +CG+CG  +RR   +I   K +   +W C  ++E+    C  ++++ED 
Sbjct  322  YSSKYALSAITFCGDCGDIYRRVYWNIHGRKEF---VWRCVTRIEQGPEVCKNRTVKEDE  378

Query  371  LHRAFTDMWNKLYTNQGTILEPLLKELTELVAARQD  406
            L  A     NKL +    ++  L  ++  +++   +
Sbjct  379  LYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTE  414

103) Tthe_0813 in NC_014410


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  238 bits (887),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 165/396 (42%), Positives = 262/396 (67%), Gaps = 14/396 (3%)

Query  6    RIDGNNALQAFKPKVRVAAYCRVSTDSDEQMASLEAQKDHYESYIRANPDWEFAGIYYDE  65
            R+++  A + +K K+RVAAYCRVST+++EQ +S E Q  HY  +I+ N +WEFAGI+ D+
Sbjct  14   RVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADD  72

Query  66   GISGTKKENRTGLLRLLADCENKKIDFIITKSVSRFARNTTDCIEMVRKLTDLGVFIYFE  125
            GISGT+  +R  + R++A+C + +ID +ITKS+SRFARNT DC++ +R+L D  + +YFE
Sbjct  73   GISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFE  132

Query  126  KENINTQRMEGELVLTILSSLAENESLSIAENSKWSIRRRFQNGTYKIAYPPY-GYD-YV  183
            KENINT    GE++LTI++SLA++ES S+++N K +++ R+Q+G  ++    + GY    
Sbjct  133  KENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE  192

Query  184  DGKLLINKEQAEIIKRIFSEALAGKGTQKIADGLNLDKIPTKRG-SHWTATTIRGILSNE  242
            DG+L I  E+AEIIKRI+ E L G++   I+ +L+ D I T  G ++W + +++ IL NE
Sbjct  193  DGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNE  252

Query  243  KYTGDVLLQKTYTDENF--KRHYNRGEKDQYMIKDHHEAIISHEEFETAQEILKQRAKE-  299
            KY GD LLQKT T + +  KR  N G+  QY + + HEAII+ E F  AQE + +R++  
Sbjct  253  KYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIY  312

Query  300  KGVIKGSSKYQKRYPFSGKIKCAECGSNFKR---RIHGSGDRKYIAWCCTKHIKDASS-C  355
             G  K    Y  +Y++S+   C++CG  ++R    IHG   RK + W C  +I +++  C
Sbjct  313  TGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHG---RKEFVWRCVTRIEQGPEVC  369

Query  356  SMKFVREDAIHQAFVVMINKLIFGHKFILRPLLQSL  391
              + V+ED +  A +  INKL+ G + +++ L +++
Sbjct  370  KNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENI  405

104) Cthe_1609 in NC_009012


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  238 bits (887),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 161/396 (41%), Positives = 265/396 (67%), Gaps = 14/396 (3%)

Query  6    RIDGNNALQAFKPKVRVAAYCRVSTDSDEQMATLEAQKDHYESYIKANPDWEFAGIYYDE  65
            R+++  A + +K K+RVAAYCRVST+++EQ ++ E Q  HY  +IK N +WEFAGI+ D+
Sbjct  14   RVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADD  72

Query  66   GISGTKKENRTGLLRLLADCENKKIDFIITKSVSRFARNTTDCIEMVRKLTDLGVFIYFE  125
            GISGT+  +R  + R++A+C + +ID +ITKS+SRFARNT DC++ +R+L D  + +YFE
Sbjct  73   GISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFE  132

Query  126  KENINTQRMEGELVLTILSSLAENESLSIAENSKWSIRRRFQNGTYKISYPPY-GYD-YV  183
            KENINT    GE++LTI++SLA++ES S+++N K +++ R+Q+G  +++   + GY    
Sbjct  133  KENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE  192

Query  184  DGKLFINKEQAEIVKRIFSEALDGKGTQKIADGLNSDKIPTKRG-SHWTATTIRGILSNE  242
            DG+L I  E+AEI+KRI+ E L+G++   I+ +L+ D I T  G ++W + +++ IL NE
Sbjct  193  DGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNE  252

Query  243  KYTGDVLLQKTYTDENF--KRHYNHGEKDQYMIKDHHEAIISHEEFEAVKEILKQRGKE-  299
            KY GD LLQKT T + +  KR  N+G+  QY + + HEAII+ E F   +E + +R++  
Sbjct  253  KYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIY  312

Query  300  KGVIKGSSKYQNRYPFSGKIKCAECGSSFKR---RIHGSGNHKYIAWCCTKHIKDASS-C  355
             G  K    Y ++Y++S+   C++CG  ++R    IHG   +K + W C  +I +++  C
Sbjct  313  TGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHG---RKEFVWRCVTRIEQGPEVC  369

Query  356  SMKFVREDAIHQAFVVMINKLIFGHKFILRPLLQSL  391
              + V+ED +  A +  INKL+ G + +++ L +++
Sbjct  370  KNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENI  405

105) Tph_c22990 in NC_018870


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  237 bits (883),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 162/396 (41%), Positives = 263/396 (67%), Gaps = 14/396 (3%)

Query  6    RIDGNNALQAFKPKVRVAAYCRVSTDSDEQMASLEAQKDHYESYIKANPDWEFAGIYYDE  65
            R+++  A + +K K+RVAAYCRVST+++EQ +S E Q  HY  +IK N +WEFAGI+ D+
Sbjct  14   RVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADD  72

Query  66   GISGTKKENRTGLLRLLADCENKKIDFIITKSVSRFARNTTDCIEMVRKLTDLGVFIYFE  125
            GISGT+  +R  + R++A+C + +ID +ITKS+SRFARNT DC++ +R+L D  + +YFE
Sbjct  73   GISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFE  132

Query  126  KENINTQRMEGELVLTILSSLAENESLSIAENSKWSIRRRFQNGTYKISYPPY-GYD-YV  183
            KENINT    GE++LTI++SLA++ES S+++N K +++ R+Q+G  +++   + GY    
Sbjct  133  KENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE  192

Query  184  DGKLFINKEQAEIVKRIFSEALDGKGTQIIADGLNSDKIPTKRG-SHWTATTIRGILSNE  242
            DG+L I  E+AEI+KRI+ E L+G++   I+ +L+ D I T  G ++W + +++ IL NE
Sbjct  193  DGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNE  252

Query  243  KYTGDVLLQKTYTDENF--KRHYNRGEKDQYMIKDHHEAIISHEEFEAVKEILKQRGKE-  299
            KY GD LLQKT T + +  KR  N G+  QY + + HEAII+ E F   +E + +R++  
Sbjct  253  KYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIY  312

Query  300  KGVIKGSSKYQNRYPFSGKIKCAECGSNFKR---RIHGSGDCKYIAWCCTKHIKDASS-C  355
             G  K    Y ++Y++S+   C++CG  ++R    IHG  +   + W C  +I +++  C
Sbjct  313  TGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKE---FVWRCVTRIEQGPEVC  369

Query  356  SMKFVREDAIHQAFVVMINKLIFGHKFILKPLLQSL  391
              + V+ED +  A +  INKL+ G + ++K L +++
Sbjct  370  KNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENI  405

106) Pmob_0428 in NC_010003


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  236 bits (881),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 166/396 (42%), Positives = 262/396 (67%), Gaps = 14/396 (3%)

Query  6    RIDGNNALQAFKPKVRVAAYCRVSTDSDEQMASLEAQKDHYESYIRANPDWEFAGIYYDE  65
            R+++  A + +K K+RVAAYCRVST+++EQ +S E Q  HY  +I+ N +WEFAGI+ D+
Sbjct  14   RVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADD  72

Query  66   GISGTKKENRTGLLRLLADCENKKIDFIITKSVSRFARNTTDCIEMVRKLTDLGVFIYFE  125
            GISGT+  +R  + R++A+C + +ID +ITKS+SRFARNT DC++ +R+L D  + +YFE
Sbjct  73   GISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFE  132

Query  126  KENINTQRMEGELVLTILGSLAENESLSIAENSKWSIRRRFQNGSYKISYPPY-GYD-YV  183
            KENINT    GE++LTI++SLA++ES S+++N K +++ R+Q+G  +++   + GY    
Sbjct  133  KENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE  192

Query  184  DGKLFINKEQAEIIKRIFSEALAGKGTQKIADGLNLDKIPTKRG-SHWTATTIRGILSNE  242
            DG+L I  E+AEIIKRI+ E L G++   I+ +L+ D I T  G ++W + +++ IL NE
Sbjct  193  DGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNE  252

Query  243  KYTGDVLLQKTYTDENF--KRHYNRGEKDQYMIKDHHEAIISHEEFEAAQEILKQRGKE-  299
            KY GD LLQKT T + +  KR  N G+  QY + + HEAII+ E F  AQE + +R++  
Sbjct  253  KYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIY  312

Query  300  KGVIKGSSKYQNRYLFSGKIKCAECGSNFKR---RIHGSGNRKYIAWCCTKHIKDASS-C  355
             G  K    Y ++Y +S+   C++CG  ++R    IHG   RK + W C  +I +++  C
Sbjct  313  TGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHG---RKEFVWRCVTRIEQGPEVC  369

Query  356  SMKFVREDAIHQAFAVMINKLIFGHKFIIRPLLQSL  391
              + V+ED +  A    INKL+ G + +I+ L +++
Sbjct  370  KNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENI  405

107) SpiGrapes_2795 in NC_016633


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  236 bits (879),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 157/378 (42%), Positives = 248/378 (66%), Gaps = 21/378 (5%)

Query  2    RTIKLIQKPKQLAT-----KNRKKRVAAYARVSTVHERQEHSLESQVDHYKRLIQANPEW  56
            + I +I   K++++     K +K RVAAY RVST  E Q+ S E QV HY  +I+ N EW
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  57   EYQGIYIDDGVSGTQISGRTQFQELITKCEQGMIDIVLTKSISRFARNTVDLLETVRRLK  116
            E+ GI+ DDG+SGT+   R +F+ +I+ C +G ID+V+TKSISRFARNT+D L+ +R+LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  117  ELNIDVRFEKENIETISSTGEFLLTVLASFAQEESRSTSENLRWGVRKRYEKG-ISLHHR  175
            + NI V FEKENI+T  + GE LLT++AS+AQ+ES+S S+N++ G++ RY++G + ++H+
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  176  VY-GYRWTGK-ELVIEPMTAKVVRKIFRDYLKGKSMKRIADELNNRSIL-HFGKP-FNDV  231
             + GY      +L I P  A ++++I+R+YL G+S+  I+  L++ +IL   GKP     
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  232  AIHTILHNERYIGDTLLQKTYCVDFMSQPRKKNRGEHPMYYVEDTHPPIIKREIFEAVSR  291
            ++  IL+NE+YIGD+LLQKT  VDF+++ R KN G+ P YYVE++H +II +E+F     
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  292  EIDRRRELGVYNMPKVSRRCFTGK------IICEKCGNNYIRTY---KTPTNANWRCKSN  342
            EI+RR +  +Y     ++R +++K       +C  CG+ Y R Y       +  WRC + 
Sbjct  304  EIHRRSN--IYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTR  361

Query  343  RRDGIKGCRSIGINEEQL  360
              +G   C++  ++E++L
Sbjct  362  IEQGPEVCKNRTVKEDEL  379

108) Mahau_2802 in NC_015520


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  235 bits (877),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 160/393 (41%), Positives = 261/393 (67%), Gaps = 8/393 (2%)

Query  6    RIDGNNALQAFKPKVRVAAYCRVSTDSDEQMASLEAQKDHYESYIKANPDWEFAGIYYDE  65
            R+++  A + +K K+RVAAYCRVST+++EQ +S E Q  HY  +IK N +WEFAGI+ D+
Sbjct  14   RVGSTAAKEKIK-KLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADD  72

Query  66   GISGTKKENRTELLRLLADCENMKIDFIITKSVSRFARNTTDCIEMVRKLTDLGVFIYFE  125
            GISGT+  +R E+ R++A+C + +ID +ITKS+SRFARNT DC++ +R+L D  + +YFE
Sbjct  73   GISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFE  132

Query  126  KENINTQRMEGELVLTILSSLAENESLSIAENSKWSIRRRFQNGTYKISYPPY-GYD-YV  183
            KENINT    GE++LTI++SLA++ES S+++N K +++ R+Q+G  +++   + GY    
Sbjct  133  KENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE  192

Query  184  DGKLFINKEQAEIIKRIFSEALAGKGTQKIADGLNLDKIPTKRG-SHWTATTIRGILSNE  242
            DG+L I  E+AEIIKRI+ E L G++   I+ +L+ D I T  G ++W + +++ IL NE
Sbjct  193  DGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNE  252

Query  243  KYTGDVLLQKTYTDENF--KRHYNRGEKDQYMIKDHHEAIISHEEFEAVKEILKQRGKE-  299
            KY GD LLQKT T + +  KR  N G+  QY + + HEAII+ E F   +E + +R++  
Sbjct  253  KYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSNIY  312

Query  300  KGVIKGSSKYQNRYPFSGKIKCAECGSSFKRRIHGSGNHKYIAWCCTKHIKDAS-ACSMK  358
             G  K    Y ++Y++S+   C++CG  ++R       +K + W C  +I +++  C  +
Sbjct  313  TGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVCKNR  372

Query  359  FVREDGIHQAFVVMMNKLIFGHKFILRPLLQSL  391
             V+ED +  A +  +NKL+ G + +++ L +++
Sbjct  373  TVKEDELYGAVMTAINKLLAGGNNMIKTLEENI  405

109) Bsel_2980 in NC_014219


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  229 bits (855),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 158/378 (42%), Positives = 248/378 (66%), Gaps = 20/378 (5%)

Query  3    KSIMTF----RIIPAKSKEQTR-LRVCAYVRVSTQMAAQGESFDQQITHYTNRFEADPAV  57
            K+IM +    R+ ++ +KE+ + LRV AY RVST+   Q  S++ Q++HYT+ +  +   
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  58   DFMGVFSDYGLTGTTVK-RPGFQAMMDQARAGKIDVIYTKAISRFARNTQAMLESIRELR  116
            +F G+F+D G++GT  K R  F+ M+ +   G+ID++ TK+ISRFARNT   L+ IR+L+
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  117  TLNVAVRFEKEQIDTRTGDGELMLTVLSSFAQEESENISQNVRWSIQRKFQKGLVVLNTE  176
              N++V FEKE+I+T  + GE++LT+++S+AQ+ES+++SQNV+ ++Q ++Q+G V +N  
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  177  RFFGYEKVE-GILKPIPEEAEVIKSIYDAYLEGQGTHRIAKNLNEAGVPTISGKP-WRES  234
            RF GY K E G L  +PEEAE+IK IY  YLEGQ+   I++ L+  G+ T +GKP WR  
Sbjct  184  RFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPE  243

Query  235  SILYLLENEKYKGDLLQQKTYTPG-VRKGKRKNQGEVEAYLMEDHHEPIVSKDMWQAVQE  293
            S+  +L+NEKY GD L QKT T + + K + KN+G+V  Y +E+ HE+I++K++    QE
Sbjct  244  SVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQE  303

Query  294  ERLRR--------KRNHQMNKRYPASGKLHCSKCGGTLRRRIWN-KGKPYETIVWQCSTY  344
            E  RR        K ++  + +Y+ S+   C+ CG+  RR  WN  G+    +VW+C T 
Sbjct  304  EIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGR--KEFVWRCVTR  361

Query  345  IQQGKSACEGTTVKDEAL  362
            I+QG   C   TVK++ L
Sbjct  362  IEQGPEVCKNRTVKEDEL  379

110) Apre_1776 in NC_013164


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  226 bits (842),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 175/429 (41%), Positives = 281/429 (66%), Gaps = 11/429 (2%)

Query  27   RVAAYCRVSTDSKDQLESYKSQVDYYTNLIKNNKNWTLAGIYADEATTGTTATKRADFMR  86
            RVAAYCRVST++ +Q  SY  QV  YT++IK+N++W +AGI+AD++ +GT + KR +F R
Sbjct  28   RVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNR  87

Query  87   LISDCQNGDIDMIITKSISRFARNTLDTLKYVRLLKennvgvvfeeenIDTLTMDGELLL  146
            +I++C +G+IDM+ITKSISRFARNTLD L+Y+R LK++N++V FE ENI+T    GE+LL
Sbjct  88   MIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLL  147

Query  147  TILSSVAQQEVENTSAHVkkglk-mkmekgelIGFQGCLGYDYDPITKSISINEEEAKIV  205
            TI++S+AQQE ++ S +VK GL+    +    +  +  +GY  D    +++I  EEA I+
Sbjct  148  TIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE-DGNLTIVPEEAEII  206

Query  206  RYIFKRYLEGNGGSVIGRELEEQGYLTPRGKTKWSDTTVLGVIKNEKYIGDILMGKTFTV  265
            + I++ YLEG++   IGR LE +G LT+ GK +W   +V  +++NEKYIGD L+ KT TV
Sbjct  207  KRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTV  266

Query  266  DPITKRRLANFGESDKYHIENHHEAIISKEDFEKAQEIRLRRAQNRNTIANKDRKREKLS  325
            D +TK+R+ N G+  +Y +EN HEAII+KE F +AQE   RR+   N  +  ++++   S
Sbjct  267  DFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRS---NIYTGEGKNKRIYS  323

Query  326  RQYAFSSMLECGFCGEILSRRTWHTSSIYKKINWQCVKSTKKGKKYCPHSKGIQEAAIEK  385
             +YA+S++  CG CG+I  R  W+  +  K + W+CV    +G   C + + ++E  +  
Sbjct  324  SKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTRIEQGPEVCKN-RTVKEDELYG  381

Query  386  AFVESYRQLCHADSTIIDDFLKIVEEEINDET--LVKDLKK-LENQLNRIISQERKLVDL  442
            A + +  +L  +++ +I  +   ++  I + T   + ++++ LE++ + +I    K  D 
Sbjct  382  AVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNSLEEKQKELIKLANKGQDY  441

Query  443  -HLEDSIDE  450
             HL D IDE
Sbjct  442  DHLADEIDE  450

111) Apre_0693 in NC_013171


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  226 bits (842),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 175/429 (41%), Positives = 281/429 (66%), Gaps = 11/429 (2%)

Query  27   RVAAYCRVSTDSKDQLESYKSQVDYYTNLIKNNKNWTLAGIYADEATTGTTATKRADFMR  86
            RVAAYCRVST++ +Q  SY  QV  YT++IK+N++W +AGI+AD++ +GT + KR +F R
Sbjct  28   RVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDGISGTNTKKRDEFNR  87

Query  87   LISDCQNGDIDMIITKSISRFARNTLDTLKYVRLLKennvgvvfeeenIDTLTMDGELLL  146
            +I++C +G+IDM+ITKSISRFARNTLD L+Y+R LK++N++V FE ENI+T    GE+LL
Sbjct  88   MIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEKENINTTDAKGEVLL  147

Query  147  TILSSVAQQEVENTSAHVkkglk-mkmekgelIGFQGCLGYDYDPITKSISINEEEAKIV  205
            TI++S+AQQE ++ S +VK GL+    +    +  +  +GY  D    +++I  EEA I+
Sbjct  148  TIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDE-DGNLTIVPEEAEII  206

Query  206  RYIFKRYLEGNGGSVIGRELEEQGYLTPRGKTKWSDTTVLGVIKNEKYIGDILMGKTFTV  265
            + I++ YLEG++   IGR LE +G LT+ GK +W   +V  +++NEKYIGD L+ KT TV
Sbjct  207  KRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEKYIGDALLQKTVTV  266

Query  266  DPITKRRLANFGESDKYHIENHHEAIISKEDFEKAQEIRLRRAQNRNTIANKDRKREKLS  325
            D +TK+R+ N G+  +Y +EN HEAII+KE F +AQE   RR+   N  +  ++++   S
Sbjct  267  DFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRS---NIYTGEGKNKRIYS  323

Query  326  RQYAFSSMLECGFCGEILSRRTWHTSSIYKKINWQCVKSTKKGKKYCPHSKGIQEAAIEK  385
             +YA+S++  CG CG+I  R  W+  +  K + W+CV    +G   C + + ++E  +  
Sbjct  324  SKYALSAITFCGDCGDIYRRVYWNIHGR-KEFVWRCVTRIEQGPEVCKN-RTVKEDELYG  381

Query  386  AFVESYRQLCHADSTIIDDFLKIVEEEINDET--LVKDLKK-LENQLNRIISQERKLVDL  442
            A + +  +L  +++ +I  +   ++  I + T   + ++++ LE++ + +I    K  D 
Sbjct  382  AVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEINNSLEEKQKELIKLANKGQDY  441

Query  443  -HLEDSIDE  450
             HL D IDE
Sbjct  442  DHLADEIDE  450

112) MGAS2096_Spy1103 in NC_008023


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  225 bits (840),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 168/419 (41%), Positives = 276/419 (66%), Gaps = 13/419 (3%)

Query  2    NDVQVIKANRNENRIRGR-KVEILRVAAYCRVSTDSEDQLNSYKSQVMYYTDLIKKKPEW  60
            +++ VI A +      ++ K+  LRVAAYCRVST++E+Q +SY  QV  YT++IKK+ EW
Sbjct  4    KNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEW  63

Query  61   SLADIYADEAITGTQVTKREDFQRMINDCMNGDIDMVITKSISRFARNTLDTLKYVRMLK  120
             +A+I+AD++I+GT+  KR++F+RMI +CM+G+IDMVITKSISRFARNTLD L+Y+R LK
Sbjct  64   EFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLK  123

Query  121  EKGIAVFFEDENINTLTMDGelllvvlssvaqqeveNISSNVKKGLKMKMQRGEL-VGFQ  179
            +K I+V+FE ENINT    GE+LL +++S+AQQE +++S NVK GL+ + Q+G + V  +
Sbjct  124  DKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHK  183

Query  180  GCLGYDYHKDTKSISVNEKEAEIVRYIFNRYIEGAGCTVIANELENLGYKTKYGSSRWVQ  239
              +GY    +  ++++   EAEI++ I+  Y+EG +   I+  LE+ G  T  G +RW  
Sbjct  184  RFMGYT-KDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRP  242

Query  240  STVIGIIKNEKYKGDLLLGKTFTVDPISKRRLENFGEEDKFYIRDHHeaiiseeifeeaQ  299
             +V  I++NEKY GD LL KT TVD ++K+R+ N G+  ++Y+ + HEAII+ E+F +AQ
Sbjct  243  ESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQ  302

Query  300  KILAKR-NVNRGVHQEGQKRNKFSRKYAFSCMIKCGFCGGTLSRRNW--HSSSAYTKTIW  356
              + +R N+  G   EG+++  +S KYA+S +  CG CG+   R  W  H+   +   +W
Sbjct  303  EEIHRRSNIYTG---EGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEF---VW  356

Query  357  HCVTATKHGKKNCPHCKGIPEEVIENAFVKSYQLLCSDQHEVVSEFLQKVEDILKDDAS  415
            +CVT   +G   C +     +E+         +LL ++ ++++  + ++++ ++ + + 
Sbjct  357  RCVTRIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGG-NNMIKTLEENIHAVIGETTE  414

113) Desde_1454 in NC_018017


> NC_009443_P1|53|G53|146320807|YP_001200518.1|Streptococcus_suis_98HAH33|+|51853..53415|-|SSU98_0960|DNA 
recombinase
Length=520

 Score =  209 bits (778),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 151/369 (41%), Positives = 242/369 (66%), Gaps = 10/369 (2%)

Query  5    RIIPAIPKENIK-LRVAAYCRVSTYGPAQLRSLELQIKTYTRMIQSHPDWIFAGVFFDVG  63
            R+ ++ +KE+IK LRVAAYCRVST    Q  S E+Q+  YT  I+ + +W FAG+F D G
Sbjct  14   RVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKNNEWEFAGIFADDG  73

Query  64   KsglrrsgrsglDKMLKKAAKGKIDYIITKSISRVSRDTLEVLKIIRFLRERGINMHFEN  123
             SG     R  +++M+     G+ID +ITKSISR +R+TL+ L+ IR L+++ I++ FE+
Sbjct  74   ISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIRQLKDKNISVYFEK  133

Query  124  EGLDSIEIGKEFEITLRGMLAQDESRNTSENIQWGFQRKFEKGDIFTKYKSFMGYTCIDD  183
            E +++ +   E  +T+ + LAQ+ES++ S+N++ G+Q ++++G +  + K FMGYT  +D
Sbjct  134  ENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQVNHKRFMGYTKDED  193

Query  184  -EIVIVPEQAEVVRKMFDLYLQGLSFGQIKAYLESQGIKTVTGKEVWDKKTIQKMLKNEK  242
             ++ IVPE+AE++++++  YL+G S+  I   LE +GI T +GK  W   +++K+L+NEK
Sbjct  194  GNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRWRPESVKKILQNEK  253

Query  243  YKGDTMLQKTFTEDFMTGKKRKNIGQRYRYYVKDSHPAIVSAEVFNKVQEEMARRGGLVH  302
            Y GD++LQKT T DF+T K+ KN G+  +YYV +SH AI++ E+F + QEE+ RR+  + 
Sbjct  254  YIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQAQEEIHRRSN-IY  312

Query  303  KEDGTVESSGSKYNGKYllgnllmcgncgASYRR----RTERGKVVWRCATRVEKGTAAC  358
              +G    +   Y++KY L+ +  CG+CG  YRR       R   VWRC TR+E+G   C
Sbjct  313  TGEGK---NKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVTRIEQGPEVC  369

Query  359  FNSPTLDEE  367
             N    ++E
Sbjct  370  KNRTVKEDE  378


 Score = 29.5 bits (92),  Expect = 0.45, Method: Compositional matrix adjust.
 Identities = 10/32 (32%), Positives = 24/32 (75%), Gaps = 0/32 (0%)

Query  383  YEETFVRNTIENIRVFEEHILICYKDKLCINI  414
            Y++ +VR+ I+++ V+E H++I +K  + ++I
Sbjct  489  YDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI  520