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Homologs of hrpL gene of NC_004578_P1

24

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpL
( NP_791231.1 )

RNA polymerase sigma factor HrpL

NC_004578
(Pseudomonas syringae DC3000)

4e-85

100

2) hrpL
( YP_273553.1 )

RNA polymerase sigma factor HrpL

NC_005773
(Pseudomonas syringae 1448A)

1e-79

92

3) Psyr_1217
( YP_234309.1 )

sigma-70 region 2:sigma-70 region 4

NC_007005
(Pseudomonas syringae B728a)

6e-79

89

4) H045_00150
( YP_007395602.1 )

sigma factor

NC_020209
(Pseudomonas poae RE*1-1-14)

1e-33

51

5) rspL
( YP_002870376.1 )

sigma factor

NC_012660
(Pseudomonas fluorescens SBW25)

9e-34

49

6) rspL
( YP_006322223.1 )

RNA polymerase sigma factor RspL

NC_017911
(Pseudomonas fluorescens A506)

7e-33

50

7) PSEBR_a5390
( YP_004356901.1 )

RNA polymerase sigma factor

NC_015379
(Pseudomonas brassicacearum NFM421)

5e-32

44

8) hrpL
( YP_005210977.1 )

protein HrpL

NC_016830
(Pseudomonas fluorescens F113)

1e-29

45

9) Marme_1067
( YP_004312178.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_015276
(Marinomonas mediterranea MMB-1)

2e-28

42

10) H650_14875
( YP_008108775.1 )

hypothetical protein

NC_021500
(Enterobacter sp. R4-368)

7e-26

43

11) hrpL
( YP_050182.1 )

sigma factor

NC_004547
(Pectobacterium atrosepticum SCRI1043)

8e-26

46

12) PC1_2204
( YP_003017779.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_012917
(Pectobacterium carotovorum PC1)

3e-25

45

13) PCC21_022820
( YP_006646938.1 )

sigma factor

NC_018525
(Pectobacterium carotovorum PCC21)

3e-25

45

14) D781_3946
( YP_007346321.1 )

RNA polymerase sigma factor, sigma-70 family

NC_020064
(Serratia marcescens FGI94)

5e-25

46

15) hrpL
( YP_005804083.1 )

RNA polymerase sigma factor HrpL

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-24

44

16) hrpL
( YP_002650066.1 )

hrp/hrc type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-24

44

17) hrpL
( YP_005818263.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor

NC_017445
(Erwinia sp. Ejp617)

1e-24

44

18) hrpL
( YP_003883238.1 )

RNA polymerase sigma-54 factor rpoN

NC_014500
(Dickeya dadantii 3937)

2e-24

46

19) hrpL
( YP_003539960.1 )

sigma factor HrpL

NC_013971
(Erwinia amylovora ATCC 49946)

2e-24

46

20) hrpL
( YP_003529894.1 )

RNA polymerase sigma factor HrpL

NC_013961
(Erwinia amylovora CFBP1430)

2e-24

46

21) Dd586_1890
( YP_003333454.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_013592
(Dickeya dadantii Ech586)

6e-24

45

22) Ser39006_2911
( YP_008523293.1 )

RNA polymerase, sigma-24 subunit, ECF subfamily

NC_022268
(Serratia sp. ATCC 39006)

2e-23

46

23) Dd1591_1893
( YP_003004222.1 )

RNA polymerase, sigma-24 subunit, ECF subfamily

NC_012912
(Dickeya zeae Ech1591)

2e-21

47

24) hrpL
( YP_001906471.1 )

Sigma factor HrpL (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-18

41