Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
regulatory protein |
NC_008253 (Escherichia coli 536) |
1e-31 |
100 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
1e-31 |
100 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
1e-31 |
100 |
|
hypothetical protein |
NC_011745 (Escherichia coli ED1a) |
1e-31 |
100 |
|
AlpA family transcriptional regulator |
NC_010498 (Escherichia coli SMS-3-5) |
1e-31 |
100 |
|
hypothetical protein |
NC_011742 (Escherichia coli S88) |
2e-31 |
99 |
|
putative regulatory protein |
NC_017633 (Escherichia coli ETEC H10407) |
3e-31 |
100 |
|
hypothetical protein |
NC_008253 (Escherichia coli 536) |
2e-30 |
98 |
|
hypothetical protein |
NC_017632 (Escherichia coli UM146) |
2e-30 |
98 |
|
hypothetical protein |
NC_007946 (Escherichia coli UTI89) |
2e-30 |
98 |
|
hypothetical protein |
NC_017646 (Escherichia coli CE10) |
4e-30 |
97 |
|
putative phage regulatory protein |
NC_011750 (Escherichia coli IAI39) |
4e-30 |
97 |
|
hypothetical protein |
NC_017644 (Escherichia coli NA114) |
4e-30 |
97 |
|
hypothetical protein |
NC_011742 (Escherichia coli S88) |
4e-30 |
97 |
|
putative regulatory protein |
NC_017626 (Escherichia coli 042) |
5e-30 |
95 |
|
phage regulatory protein |
NC_011748 (Escherichia coli 55989) |
5e-30 |
95 |
|
AlpA family transcriptional regulator |
NC_010498 (Escherichia coli SMS-3-5) |
8e-30 |
95 |
|
prophage CP4-57 regulatory protein |
NC_009801 (Escherichia coli E24377A) |
2e-29 |
95 |
|
transcriptional regulator |
NC_017631 (Escherichia coli ABU 83972) |
3e-29 |
94 |
|
Transcriptional regulator, AlpA |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
2e-27 |
99 |
|
putative DNA binding protein |
NC_013364 (Escherichia coli 11128) |
6e-25 |
96 |
|
regulatory protein |
NC_013361 (Escherichia coli 11368) |
6e-25 |
96 |
|
DNA binding protein |
NC_018650 (Escherichia coli 2009EL-2050) |
6e-25 |
96 |
|
DNA binding protein |
NC_018661 (Escherichia coli 2009EL-2071) |
6e-25 |
96 |
|
putative DNA binding protein |
NC_018658 (Escherichia coli 2011C-3493) |
6e-25 |
96 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
6e-25 |
96 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
6e-25 |
96 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
6e-25 |
96 |
|
hypothetical protein |
NC_013008 (Escherichia coli TW14359) |
6e-25 |
96 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
6e-25 |
96 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
6e-25 |
96 |
|
transcriptional regulator |
NC_017631 (Escherichia coli ABU 83972) |
1e-24 |
94 |
|
hypothetical protein |
NC_017646 (Escherichia coli CE10) |
2e-22 |
100 |
|
hypothetical protein |
NC_011750 (Escherichia coli IAI39) |
2e-22 |
100 |
|
AlpA family transcriptional regulator |
NC_011083 (Salmonella enterica SL476) |
2e-22 |
100 |
|
phage regulatory protein |
NC_017731 (Providencia stuartii MRSN 2154) |
1e-20 |
64 |
|
AlpA family protein |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
3e-19 |
72 |
|
transcriptional regulator AlpA family |
NC_011283 (Klebsiella pneumoniae 342) |
6e-19 |
69 |
|
phage regulatory protein |
NC_010554 (Proteus mirabilis HI4320) |
7e-19 |
64 |
|
phage regulatory protein |
NC_017731 (Providencia stuartii MRSN 2154) |
2e-18 |
68 |
|
putative regulatory protein |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
2e-18 |
70 |
|
phage regulatory protein |
NC_017731 (Providencia stuartii MRSN 2154) |
2e-18 |
70 |
|
hypothetical protein |
NC_015663 (Enterobacter aerogenes KCTC 2190) |
3e-18 |
70 |
|
putative regulatory protein |
NC_020418 (Morganella morganii KT) |
5e-18 |
65 |
|
transcriptional regulator |
NC_017631 (Escherichia coli ABU 83972) |
6e-18 |
73 |
|
hypothetical protein |
NC_017652 (Escherichia coli clone D i14) |
6e-18 |
73 |
|
hypothetical protein |
NC_017651 (Escherichia coli clone D i2) |
6e-18 |
73 |
|
transcriptional regulator |
NC_017656 (Escherichia coli RM12579) |
6e-18 |
63 |
|
phage transcriptional regulator AlpA |
NC_018405 (Enterobacter cloacae ENHKU01) |
7e-18 |
70 |
|
phage transcriptional regulator, AlpA |
NC_012917 (Pectobacterium carotovorum PC1) |
8e-18 |
72 |
|
transcriptional regulator |
NC_013716 (Citrobacter rodentium ICC168) |
8e-18 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018650 (Escherichia coli 2009EL-2050) |
8e-18 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018650 (Escherichia coli 2009EL-2050) |
8e-18 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018661 (Escherichia coli 2009EL-2071) |
8e-18 |
70 |
|
Prophage CP4-57 regulatory protein |
NC_018661 (Escherichia coli 2009EL-2071) |
8e-18 |
70 |
|
putative Prophage CP4-57 regulatory protein |
NC_018658 (Escherichia coli 2011C-3493) |
8e-18 |
70 |
|
putative Prophage CP4-57 regulatory protein |
NC_018658 (Escherichia coli 2011C-3493) |
8e-18 |
70 |
|
regulatory protein |
NC_008253 (Escherichia coli 536) |
8e-18 |
70 |
|
prophage regulatory protein AlpA |
NC_017631 (Escherichia coli ABU 83972) |
8e-18 |
70 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
8e-18 |
70 |
|
hypothetical protein |
NC_013654 (Escherichia coli SE15) |
8e-18 |
70 |
|
phage transcriptional regulator AlpA |
NC_010465 (Yersinia pseudotuberculosis YPIII) |
9e-18 |
72 |
|
Rha family transcriptional regulator |
NC_021500 (Enterobacter sp. R4-368) |
9e-18 |
70 |
|
putative regulatory protein |
NC_017631 (Escherichia coli ABU 83972) |
9e-18 |
70 |
|
putative DNA binding protein |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
9e-18 |
68 |
|
transcriptional regulator |
NC_013353 (Escherichia coli 12009) |
1e-17 |
70 |
|
regulatory protein |
NC_013353 (Escherichia coli 12009) |
1e-17 |
70 |
|
transcriptional regulator |
NC_013941 (Escherichia coli CB9615) |
1e-17 |
70 |
|
hypothetical protein |
NC_017652 (Escherichia coli clone D i14) |
1e-17 |
70 |
|
hypothetical protein |
NC_017651 (Escherichia coli clone D i2) |
1e-17 |
70 |
|
phage transcriptional regulator, AlpA |
NC_016902 (Escherichia coli KO11FL) |
1e-17 |
72 |
|
phage transcriptional regulator AlpA |
NC_017660 (Escherichia coli KO11FL) |
1e-17 |
72 |
|
Rha family transcriptional regulator |
NC_022364 (Escherichia coli LY180) |
1e-17 |
72 |
|
AlpA-like transcriptional regulator |
NC_017635 (Escherichia coli W) |
1e-17 |
72 |
|
phage transcriptional regulator AlpA |
NC_017664 (Escherichia coli W) |
1e-17 |
72 |
|
hypothetical protein |
NC_017626 (Escherichia coli 042) |
1e-17 |
68 |
|
hypothetical protein |
NC_013361 (Escherichia coli 11368) |
1e-17 |
68 |
|
regulatory protein |
NC_021818 (Salmonella enterica CFSAN002050) |
1e-17 |
67 |
|
hypothetical protein |
NC_017644 (Escherichia coli NA114) |
2e-17 |
70 |
|
Regulator of excision |
NC_017328 (Shigella flexneri 2002017) |
2e-17 |
70 |
|
hypothetical protein |
NC_004741 (Shigella flexneri 2457T) |
2e-17 |
70 |
|
hypothetical protein |
NC_004337 (Shigella flexneri 301) |
2e-17 |
70 |
|
hypothetical protein |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-17 |
67 |
|
hypothetical protein |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-17 |
67 |
|
hypothetical protein |
NC_018658 (Escherichia coli 2011C-3493) |
2e-17 |
67 |
|
phage transcriptional regulator AlpA |
NC_015663 (Enterobacter aerogenes KCTC 2190) |
2e-17 |
71 |
|
phage transcriptional regulator AlpA |
NC_013592 (Dickeya dadantii Ech586) |
2e-17 |
65 |
|
DNA binding protein |
NC_013353 (Escherichia coli 12009) |
3e-17 |
67 |
|
phage transcriptional regulator AlpA |
NC_014618 (Enterobacter cloacae SCF1) |
3e-17 |
60 |
|
transcriptional regulator |
NC_021844 (Salmonella enterica CFSAN000189) |
3e-17 |
60 |
|
transcriptional regulatory protein |
NC_021591 (Serratia odorifera 4Rx13) |
4e-17 |
67 |
|
putative regulatory protein |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
4e-17 |
63 |
|
hypothetical protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
6e-17 |
68 |
|
regulatory protein |
NC_008253 (Escherichia coli 536) |
6e-17 |
68 |
|
putative prophage regulatory protein |
NC_017631 (Escherichia coli ABU 83972) |
6e-17 |
68 |
|
transcriptional regulator, AlpA family |
NC_017628 (Escherichia coli IHE3034) |
6e-17 |
68 |
|
hypothetical protein |
NC_017644 (Escherichia coli NA114) |
6e-17 |
68 |
|
putative transcriptional regulator |
NC_022370 (Escherichia coli PMV-1) |
6e-17 |
68 |
|
putative regulatory protein |
NC_017632 (Escherichia coli UM146) |
6e-17 |
68 |
|
transcriptional regulator |
NC_013361 (Escherichia coli 11368) |
7e-17 |
67 |
|
phage transcriptional regulator AlpA |
NC_013592 (Dickeya dadantii Ech586) |
2e-16 |
58 |
|
transcriptional regulator |
NC_013353 (Escherichia coli 12009) |
2e-16 |
67 |
|
InterPro motifs Prophage CP4-57 regulatory protein (AlpA) |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-16 |
67 |
|
InterPro motifs Prophage CP4-57 regulatory protein (AlpA) |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-16 |
67 |
|
InterPro motifs Prophage CP4-57 regulatory protein (AlpA) |
NC_018658 (Escherichia coli 2011C-3493) |
2e-16 |
67 |
|
Putative transcriptional regulator |
NC_017663 (Escherichia coli P12b) |
2e-16 |
67 |
|
prophage CP4-57 regulatory protein AlpA |
NC_010498 (Escherichia coli SMS-3-5) |
2e-16 |
67 |
|
phage regulatory protein AlpA |
NC_017641 (Escherichia coli UMNK88) |
2e-16 |
67 |
|
phage transcriptional regulator, AlpA |
NC_013421 (Pectobacterium wasabiae WPP163) |
5e-16 |
59 |
|
regulatory protein |
NC_011740 (Escherichia fergusonii ATCC 35469) |
2e-15 |
63 |
|
phage transcriptional regulator, AlpA |
NC_016902 (Escherichia coli KO11FL) |
3e-15 |
55 |
|
phage regulatory protein |
NC_017660 (Escherichia coli KO11FL) |
3e-15 |
55 |
|
Rha family transcriptional regulator |
NC_022364 (Escherichia coli LY180) |
3e-15 |
55 |
|
hypothetical protein |
NC_017635 (Escherichia coli W) |
3e-15 |
55 |
|
phage regulatory protein |
NC_017664 (Escherichia coli W) |
3e-15 |
55 |
|
phage-regulatory protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
5e-15 |
64 |
|
hypothetical protein |
NC_013961 (Erwinia amylovora CFBP1430) |
5e-15 |
64 |
|
putative IS3 family transposase orfB |
NC_020260 (Cronobacter sakazakii Sp291) |
1e-10 |
50 |
|
putative IS3 family transposase orfB |
NC_014121 (Enterobacter cloacae ATCC 13047) |
1e-10 |
50 |
|
hypothetical protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
9e-09 |
43 |
|
Phage transcriptional regulator, AlpA |
NC_017845 (Pectobacterium sp. SCC3193) |
9e-09 |
41 |
|
CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage |
NC_013892 (Xenorhabdus bovienii SS-2004) |
4e-08 |
47 |
|
phage-like protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
6e-08 |
43 |
|
phage-like protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
7e-08 |
43 |
|
prophage CP4-57 regulatory protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
8e-08 |
47 |
|
hypothetical protein |
NC_010694 (Erwinia tasmaniensis Et1/99) |
8e-08 |
46 |
|
CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage |
NC_013892 (Xenorhabdus bovienii SS-2004) |
1e-07 |
48 |
|
AlpA family transcriptional regulator |
NC_011138 (Alteromonas macleodii Deep ecotype) |
1e-07 |
43 |
|
putative regulatory protein from prophage (AlpA family) |
NC_011745 (Escherichia coli ED1a) |
9e-08 |
42 |
|
phage-like protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
1e-07 |
46 |
|
Transcriptional regulator, AlpA like protein |
NC_017309 (Edwardsiella tarda FL6-60) |
1e-07 |
42 |
|
phage transcriptional regulator AlpA |
NC_009438 (Shewanella putrefaciens CN-32) |
1e-07 |
43 |
|
putative phage DNA binding protein |
NC_011741 (Escherichia coli IAI1) |
1e-07 |
42 |
|
putative phage DNA binding protein |
NC_020796 (Edwardsiella tarda C07-087) |
2e-07 |
43 |
|
phage regulatory protein |
NC_018690 (Actinobacillus suis H91-0380) |
2e-07 |
41 |
|
hypothetical protein |
NC_020796 (Edwardsiella tarda C07-087) |
2e-07 |
43 |
|
transcriptional regulator |
NC_009662 (Nitratiruptor sp. SB155-2) |
3e-07 |
50 |
|
prophage regulatory protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
6e-07 |
42 |
|
phage transcriptional regulator, AlpA |
NC_008322 (Shewanella sp. MR-7) |
2e-06 |
41 |
|
transcriptional regulator AlpA family |
NC_011283 (Klebsiella pneumoniae 342) |
2e-06 |
41 |
|
phage transcriptional regulator, AlpA |
NC_009436 (Enterobacter sp. 638) |
2e-06 |
44 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
3e-06 |
46 |
|
Predicted transcriptional regulator |
NC_021046 (Enterobacter cloacae NCTC 9394) |
3e-06 |
42 |
|
DNA-binding protein |
NC_020307 (Salmonella enterica CFSAN001992) |
3e-06 |
42 |
|
phage transcriptional regulator AlpA |
NC_009901 (Shewanella pealeana ATCC 700345) |
5e-06 |
42 |
|
putative DNA binding protein from phage origin |
NC_011745 (Escherichia coli ED1a) |
6e-06 |
41 |
|
regulatory protein |
NC_018522 (Klebsiella pneumoniae 1084) |
6e-06 |
41 |
|
phage transcriptional regulator, AlpA |
NC_022268 (Serratia sp. ATCC 39006) |
1e-05 |
43 |
|
phage transcriptional regulator AlpA |
NC_011663 (Shewanella baltica OS223) |
1e-05 |
42 |
|
DNA-binding protein |
NC_014012 (Shewanella violacea DSS12) |
1e-05 |
42 |
|
AlpA family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
4e-05 |
46 |
|
AlpA family phage transcriptional regulator |
NC_017554 (Pantoea ananatis PA13) |
6e-05 |
41 |
|
phage transcriptional regulator AlpA |
NC_010322 (Pseudomonas putida GB-1) |
4e-04 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004431_P2' AND ph.id_pai_orf='53' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc