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Homologs of STY4576 gene of NC_003198_P9

133

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) STY4576
( NP_458661.1 )

hypothetical protein

NC_003198
(Salmonella enterica CT18)

2e-142

100

2) STBHUCCB_45270
( YP_005219945.1 )

PFL4710 family integrating conjugative element protein

NC_016832
(Salmonella enterica P-stx-12)

2e-142

100

3) SPC_4430
( YP_002639924.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

2e-142

100

4) t4273
( NP_807871.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

2e-142

100

5) TY21A_21760
( YP_007928512.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

2e-142

100

6) W5S_3486
( YP_006284428.1 )

Integrating conjugative element protein, PFL4710 family

NC_017845
(Pectobacterium sp. SCC3193)

9e-110

7) Pecwa_0679
( YP_003258107.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

2e-109

8) PAGR_g3837
( YP_005994545.1 )

integrating conjugative element protein TraU

NC_017554
(Pantoea ananatis PA13)

2e-109

9) SPAB_05391
( YP_001591497.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

3e-108

10) ECL_00449
( YP_003610964.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

5e-107

11) PAJ_2507
( YP_005935383.1 )

hypothetical protein

NC_017531
(Pantoea ananatis AJ13355)

2e-105

12) PANA5342_3968
( YP_005197398.1 )

integrating conjugative element protein

NC_016816
(Pantoea ananatis LMG 5342)

8e-105

13) ECA0577
( YP_048693.1 )

hypothetical protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-103

14) Ser39006_1513
( YP_008521895.1 )

integrating conjugative element protein, PFL_4710 family

NC_022268
(Serratia sp. ATCC 39006)

5e-102

15) NT01EI_0353
( YP_002931830.1 )

Protein of unknown function (DUF1527)

NC_012779
(Edwardsiella ictaluri 93-146)

8e-101

16) UMNK88_5044
( YP_006136683.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

8e-101

17) XNC1_3573
( YP_003713713.1 )

hypothetical protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

3e-100

18) CFSAN002050_22250
( YP_008262317.1 )

integrating conjugative element protein

NC_021818
(Salmonella enterica CFSAN002050)

5e-100

19) EbC_pEb10200460
( YP_003739103.1 )

hypothetical protein

NC_014304
(Erwinia billingiae Eb661)

1e-99

20) EPYR_03262
( YP_005804013.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-99

21) EpC_30230
( YP_002650004.1 )

hypothetical protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-99

22) plu1087
( NP_928412.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-99

23) YPZ3_0322
( YP_003566494.1 )

hypothetical protein

NC_014029
(Yersinia pestis Z176003)

1e-98

24) KPHS_44900
( YP_005228790.1 )

hypothetical protein

NC_016845
(Klebsiella pneumoniae HS11286)

1e-98

25) N559_0815
( YP_008423885.1 )

hypothetical protein

NC_022082
(Klebsiella pneumoniae JM45)

1e-98

26) PMI2573
( YP_002152292.1 )

hypothetical protein

NC_010554
(Proteus mirabilis HI4320)

2e-98

27) ECED1_3557
( YP_002399416.1 )

hypothetical protein

NC_011745
(Escherichia coli ED1a)

3e-98

28) Spro_4074
( YP_001480297.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

3e-97

29) Spro_4164
( YP_001480386.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

6e-97

30) Spro_0349
( YP_001476587.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

9e-97

31) SerAS9_0300
( YP_004503723.1 )

integrating conjugative element protein

NC_015567
(Serratia plymuthica AS9)

6e-96

32) SerAS12_0300
( YP_004498771.1 )

integrating conjugative element protein

NC_015566
(Serratia sp. AS12)

6e-96

33) SerAS13_0299
( YP_006023186.1 )

integrating conjugative element protein

NC_017573
(Serratia sp. AS13)

6e-96

34) XBJ1_1497
( YP_003467410.1 )

hypothetical protein

NC_013892
(Xenorhabdus bovienii SS-2004)

3e-95

35) YpsIP31758_3701
( YP_001402655.1 )

hypothetical protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

8e-95

36) YE3467
( YP_001007628.1 )

hypothetical protein

NC_008800
(Yersinia enterocolitica 8081)

2e-92

37) XNC1_3471
( YP_003713625.1 )

hypothetical protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-90

38) EAM_2855
( YP_003539922.1 )

hypothetical protein

NC_013971
(Erwinia amylovora ATCC 49946)

2e-86

39) EAMY_0571
( YP_003529929.1 )

hypothetical protein

NC_013961
(Erwinia amylovora CFBP1430)

2e-86

40) LF82_692
( YP_002559030.1 )

hypothetical protein

NC_011993
(Escherichia coli LF82)

2e-83

41) NRG857_20930
( YP_006122528.1 )

hypothetical protein

NC_017634
(Escherichia coli NRG 857C)

2e-83

42) G655_23755
( YP_007711587.1 )

hypothetical protein

NC_020912
(Pseudomonas aeruginosa B136-33)

5e-81

43) Pfl01_3026
( YP_348755.1 )

hypothetical protein

NC_007492
(Pseudomonas fluorescens Pf0-1)

1e-80

44) Dd1591_0431
( YP_003002797.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

1e-79

45) W5S_1486
( YP_006282452.1 )

Integrating conjugative element protein, PFL4710 family

NC_017845
(Pectobacterium sp. SCC3193)

2e-79

46) Psyr_1429
( YP_234518.1 )

hypothetical protein

NC_007005
(Pseudomonas syringae B728a)

5e-79

47) PFLU1923
( YP_002871557.1 )

hypothetical protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-78

48) Bpet1375
( YP_001629980.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

2e-78

49) PSF113_3300
( YP_005208693.1 )

hypothetical protein

NC_016830
(Pseudomonas fluorescens F113)

4e-78

50) ebA2511
( YP_158442.1 )

hypothetical protein

NC_006513
(Aromatoleum aromaticum EbN1)

4e-78

51) Pecwa_1621
( YP_003259018.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

5e-78

52) L483_22295
( YP_008096225.1 )

integrating conjugative element protein

NC_021491
(Pseudomonas putida H8234)

1e-77

53) A458_06400
( YP_006456949.1 )

hypothetical protein

NC_018028
(Pseudomonas stutzeri CCUG 29243)

2e-77

54) Tola_2448
( YP_002893629.1 )

hypothetical protein

NC_012691
(Tolumonas auensis DSM 9187)

3e-77

55) YSA_00802
( YP_006384329.1 )

hypothetical protein

NC_017986
(Pseudomonas putida ND6)

5e-77

56) XAC2283
( NP_642600.1 )

hypothetical protein

NC_003919
(Xanthomonas axonopodis 306)

1e-76

57) XCAW_01946
( YP_007649935.1 )

Hypothetical Protein

NC_020815
(Xanthomonas citri Aw12879)

1e-76

58) Tmz1t_0944
( YP_002354606.1 )

hypothetical protein

NC_011662
(Thauera sp. MZ1T)

1e-76

59) PA14_59990
( YP_792987.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

1e-76

60) DSC_04055
( YP_004929505.1 )

hypothetical protein

NC_016147
(Pseudoxanthomonas spadix BD-a59)

2e-76

61) PADK2_24070
( YP_006484779.1 )

hypothetical protein

NC_018080
(Pseudomonas aeruginosa DK2)

2e-76

62) XAC29_11575
( YP_007636733.1 )

hypothetical protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

3e-76

63) Bpet4261
( YP_001632877.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

3e-76

64) Daci_4183
( YP_001565199.1 )

hypothetical protein

NC_010002
(Delftia acidovorans SPH-1)

3e-76

65) PLES_26491
( YP_002440242.1 )

hypothetical protein

NC_011770
(Pseudomonas aeruginosa LESB58)

3e-76

66) NCGM2_1407
( YP_005979658.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

3e-76

67) PputW619_3331
( YP_001750185.1 )

hypothetical protein

NC_010501
(Pseudomonas putida W619)

3e-76

68) PSTAA_1245
( YP_005937897.1 )

hypothetical protein

NC_017532
(Pseudomonas stutzeri DSM 4166)

3e-76

69) Bpet1502
( YP_001630109.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

1e-75

70) NCGM2_1802
( YP_005980047.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

4e-76

71) AvCA_36350
( YP_007894564.1 )

hypothetical protein

NC_021149
(Azotobacter vinelandii CA)

7e-76

72) AvCA6_36350
( YP_007899613.1 )

hypothetical protein

NC_021150
(Azotobacter vinelandii CA6)

7e-76

73) Avin_36350
( YP_002800757.1 )

hypothetical protein

NC_012560
(Azotobacter vinelandii DJ)

7e-76

74) PSPA7_4520
( YP_001349870.1 )

hypothetical protein

NC_009656
(Pseudomonas aeruginosa PA7)

1e-75

75) M062_04890
( YP_008131427.1 )

integrating conjugative element protein

NC_021577
(Pseudomonas aeruginosa RP73)

1e-75

76) Alide2_1808
( YP_004387710.1 )

integrating conjugative element protein

NC_015422
(Alicycliphilus denitrificans K601)

2e-75

77) L483_11835
( YP_008094153.1 )

integrating conjugative element protein

NC_021491
(Pseudomonas putida H8234)

2e-75

78) Tgr7_2863
( YP_002514923.1 )

hypothetical protein

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

2e-75

79) KP1_0595
( YP_002917523.1 )

hypothetical protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

2e-75

80) Ajs_2182
( YP_986423.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

2e-75

81) BN117_0515
( YP_006894565.1 )

hypothetical protein

NC_018828
(Bordetella parapertussis Bpp5)

2e-75

82) PSTAB_1223
( YP_004713593.1 )

hypothetical protein

NC_015740
(Pseudomonas stutzeri ATCC 17588)

2e-75

83) NH44784_008481
( YP_008027950.1 )

hypothetical protein

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-75

84) Mpe_A2398
( YP_001021588.1 )

hypothetical protein

NC_008825
(Methylibium petroleiphilum PM1)

2e-75

85) A79E_4492
( YP_006638251.1 )

hypothetical protein

NC_018522
(Klebsiella pneumoniae 1084)

2e-75

86) PSPTO_0849
( NP_790689.1 )

hypothetical protein

NC_004578
(Pseudomonas syringae DC3000)

3e-75

87) Alide2_1957
( YP_004387848.1 )

integrating conjugative element protein

NC_015422
(Alicycliphilus denitrificans K601)

5e-75

88) ebA2398
( YP_158365.1 )

hypothetical protein

NC_006513
(Aromatoleum aromaticum EbN1)

5e-75

89) XC_1042
( YP_242133.2 )

hypothetical protein

NC_007086
(Xanthomonas campestris 8004)

8e-75

90) XCC3115
( NP_638462.2 )

hypothetical protein

NC_003902
(Xanthomonas campestris ATCC 33913)

8e-75

91) PSTAB_2490
( YP_004714860.1 )

hypothetical protein

NC_015740
(Pseudomonas stutzeri ATCC 17588)

8e-75

92) NH44784_010381
( YP_008028138.1 )

FIG00956406: hypothetical protein

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

9e-75

93) HEAR2024
( YP_001100291.1 )

hypothetical protein

NC_009138
(Herminiimonas arsenicoxydans )

9e-75

94) Plav_3428
( YP_001414688.1 )

hypothetical protein

NC_009719
(Parvibaculum lavamentivorans DS-1)

1e-74

95) NH44784_009431
( YP_008028044.1 )

FIG00956406: hypothetical protein

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

2e-74

96) Neut_0076
( YP_746329.1 )

hypothetical protein

NC_008344
(Nitrosomonas eutropha C91)

2e-74

97) SMD_1512
( YP_006184244.1 )

hypothetical protein

NC_017671
(Stenotrophomonas maltophilia D457)

2e-74

98) TMO_c0033
( YP_006373625.1 )

hypothetical protein

NC_017958
(Tistrella mobilis KA081020-065)

2e-74

99) Ajs_1252
( YP_985552.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

2e-74

100) G655_20400
( YP_007710919.1 )

hypothetical protein

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-74

101) A464_4497
( YP_008325089.1 )

hypothetical protein

NC_021870
(Salmonella bongori N268-08)

2e-74

102) Rmet_2357
( YP_584503.1 )

hypothetical protein

NC_007973
(Cupriavidus metallidurans CH34)

3e-74

103) Aave_0490
( YP_968870.1 )

hypothetical protein

NC_008752
(Acidovorax citrulli AAC00-1)

3e-74

104) XCAW_01693
( YP_007649688.1 )

Hypothetical Protein

NC_020815
(Xanthomonas citri Aw12879)

4e-74

105) Alide_4031
( YP_004128624.1 )

hypothetical protein

NC_014910
(Alicycliphilus denitrificans BC)

5e-74

106) Pput_2953
( YP_001268265.1 )

hypothetical protein

NC_009512
(Pseudomonas putida F1)

7e-74

107) XCV2363
( YP_364094.1 )

hypothetical protein

NC_007508
(Xanthomonas campestris 85-10)

7e-74

108) Ajs_1394
( YP_985685.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

8e-74

109) PSEBR_m637
( YP_004353225.1 )

hypothetical protein

NC_015379
(Pseudomonas brassicacearum NFM421)

3e-73

110) AXYL_01110
( YP_003977169.1 )

hypothetical protein

NC_014640
(Achromobacter xylosoxidans A8)

6e-73

111) PADK2_11950
( YP_006482375.1 )

hypothetical protein

NC_018080
(Pseudomonas aeruginosa DK2)

6e-73

112) Bpet1085
( YP_001629688.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

2e-72

113) xccb100_2457
( YP_001903862.1 )

hypothetical protein

NC_010688
(Xanthomonas campestris B100)

1e-71

114) XC_2027
( YP_243108.1 )

hypothetical protein

NC_007086
(Xanthomonas campestris 8004)

8e-72

115) B5T_02111
( YP_006820728.1 )

hypothetical protein

NC_018691
(Alcanivorax dieselolei B5)

8e-72

116) HS_1775
( YP_719980.1 )

hypothetical protein

NC_008309
(Haemophilus somnus 129PT)

2e-70

117) PFL_4710
( YP_261793.1 )

integrating conjugative element protein

NC_004129
(Pseudomonas protegens Pf-5)

4e-70

118) HELO_4068
( YP_003899137.1 )

hypothetical protein

NC_014532
(Halomonas elongata DSM 2581)

6e-68

119) R2866_0571
( YP_005827266.1 )

conserved hypothetical protein p52

NC_017451
(Haemophilus influenzae R2866)

5e-66

120) HIB_01220
( YP_005178157.1 )

exported protein

NC_016809
(Haemophilus influenzae 10810)

7e-66

121) NTHI0146
( YP_247791.1 )

hypothetical protein

NC_007146
(Haemophilus influenzae 86-028NP)

7e-66

122) PARA_11760
( YP_004822870.1 )

hypothetical protein

NC_015964
(Haemophilus parainfluenzae T3T1)

7e-66

123) HSM_1690
( YP_001785010.1 )

hypothetical protein

NC_010519
(Haemophilus somnus 2336)

2e-65

124) MHH_c22740
( YP_007884071.1 )

integrating conjugative element protein

NC_021082
(Mannheimia haemolytica M42548)

2e-65

125) Pmu_02990
( YP_005176198.1 )

integrating conjugative element protein, PFL family

NC_016808
(Pasteurella multocida 36950)

2e-65

126) UMN179_00323
( YP_004419257.1 )

integrating conjugative element protein

NC_015460
(Gallibacterium anatis UMN179)

4e-65

127) PPS_2340
( YP_004701781.1 )

hypothetical protein

NC_015733
(Pseudomonas putida S16)

9e-65

128) F382_13655
( YP_008235529.1 )

integrating conjugative element protein

NC_021743
(Mannheimia haemolytica D153)

2e-61

129) J451_13890
( YP_008224092.1 )

integrating conjugative element protein

NC_021739
(Mannheimia haemolytica D174)

2e-61

130) MHH_c22380
( YP_007884035.1 )

integrating conjugative element protein

NC_021082
(Mannheimia haemolytica M42548)

2e-61

131) D650_16340
( YP_007666411.1 )

Conserved exported protein

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

2e-61

132) D648_11220
( YP_007668634.1 )

Conserved exported protein

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

2e-61

133) N220_08220
( YP_008339088.1 )

integrating conjugative element protein

NC_021883
(Mannheimia haemolytica USMARC_2286)

2e-61

• Sequence Alignments

1) SPC_4430 in NC_012125


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  498 bits (1878),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60
            MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTgalsglaagggNQEQ  120
            VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180
            KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240
            ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300
            HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300

Query  301  LWQPYSCCKRRGQTFLYSTDIN  322
            LWQPYSCCKRRGQTFLYSTDIN
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

2) STY4576 in NC_003198


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  498 bits (1878),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60
            MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTgalsglaagggNQEQ  120
            VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180
            KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240
            ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300
            HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300

Query  301  LWQPYSCCKRRGQTFLYSTDIN  322
            LWQPYSCCKRRGQTFLYSTDIN
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

3) STBHUCCB_45270 in NC_016832


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  498 bits (1878),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60
            MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTgalsglaagggNQEQ  120
            VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180
            KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240
            ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300
            HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300

Query  301  LWQPYSCCKRRGQTFLYSTDIN  322
            LWQPYSCCKRRGQTFLYSTDIN
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

4) TY21A_21760 in NC_021176


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  498 bits (1878),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60
            MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTgalsglaagggNQEQ  120
            VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180
            KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240
            ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300
            HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300

Query  301  LWQPYSCCKRRGQTFLYSTDIN  322
            LWQPYSCCKRRGQTFLYSTDIN
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

5) t4273 in NC_004631


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  498 bits (1878),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)

Query  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60
            MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTgalsglaagggNQEQ  120
            VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180
            KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240
            ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300
            HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWT  300

Query  301  LWQPYSCCKRRGQTFLYSTDIN  322
            LWQPYSCCKRRGQTFLYSTDIN
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

6) W5S_3486 in NC_017845


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  389 bits (1464),  Expect = 9e-110, Method: Compositional matrix adjust.
 Identities = 211/298 (71%), Positives = 269/298 (91%), Gaps = 0/298 (0%)

Query  25   ASVNTASLMASATSVSCISWRVKGICYWLLCTPFGCSIKTSVKVEHFIPEAVVSAYANEG  84
            A++NTAS++AS+ S SCISWR+ GICYWL+CTPFGC++KTS+KV+HFIPEAVVS+Y   G
Sbjct  24   AALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASG  83

Query  85   ENPWVEMATVSQAAGSGESALVGSLSGVATGGGNQELKAPGLRKKNIHFYYADAYGHPAT  144
             NPW EM+ VSQ+AG+ E+A+ G+LSG+A+GGGNQE K PG RK N++F YADA GHP+T
Sbjct  84   GNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPST  143

Query  145  SAIGGMVPGYSCQTAATPFVPYFMSSLDALVWRSGIPESLYPEALIPGQRELGSQASANM  204
            S IGG +PGYSC++AATP+VPYF+S+LD+L WR+G+PES+YPEALIPG+RE+GS ++ N+
Sbjct  144  SIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNI  203

Query  205  WGNVYPRSGFVTQHDGYKSAALVAQRVADVITRSGQLHVYQPLVGQRSPGYWPPDPVREN  264
            WGN+YPRSGFVTQ+D+YKS+A+VAQRVAD+ITR+ Q+HVY+PL G+ S+GYWPP+PV+EN
Sbjct  204  WGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKEN  263

Query  265  TGTQNHKWQRLSPQLSNSCAVFPDNGAVAQNGQYAWALWQPYSCCKRRGQTFLYSTDF  322
            TGTQNHKWQ+LSP LS SC+VFPD G +A+NG+YAW+LWQPYSCCKRRGQTFLYSTD+
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

7) Pecwa_0679 in NC_013421


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  388 bits (1460),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 209/298 (71%), Positives = 270/298 (91%), Gaps = 0/298 (0%)

Query  25   ASVNTASLMASATSVSCISWRVKGICYWLLCTPFGCSIKTSVKVEHFIPEAVVSAYANEG  84
            A++NTAS++AS+ S SCISWR+ GICYWL+CTPFGC++KTS+KV+HFIPEAVVS+Y   G
Sbjct  24   AALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASG  83

Query  85   ENPWIEMATVSQAAGSGESALVGSLSGVATGGGNQELKAPGLRKKNLHFYYADAYGHPAT  144
             NPW EM+ VSQ+AG+ E+A+ G+LSG+A+GGGNQE K PG RK N++F YADA GHP+T
Sbjct  84   GNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPST  143

Query  145  SAIGGMVPGYSCQTAATPFIPYFMSSLDALVWRSGIPESLYPEALIPGQRELGSQASANM  204
            S IGG +PGYSC++AATP++PYF+S+LD+L WR+G+PES+YPEALIPG+RE+GS ++ N+
Sbjct  144  SIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNI  203

Query  205  WGNVYPRSGFVTQHDGYKSAALVAQRVADVITRSGQLHVYQPLVGQRSPGYWPPDPVREN  264
            WGN+YPRSGFVTQ+D+YKS+A+VAQRVAD+ITR+ Q+HVY+PL G+ S+GYWPP+PV+EN
Sbjct  204  WGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKEN  263

Query  265  TGTQNHKWQRLSPQLSNSCAVFPDSGAVAQNGQYAWALWQPYSCCKRRGQTFLYSSDF  322
            TGTQNHKWQ+LSP LS SC+VFPD+G +A+NG+YAW+LWQPYSCCKRRGQTFLYS+D+
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

8) PAGR_g3837 in NC_017554


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  388 bits (1460),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 218/323 (68%), Positives = 278/323 (87%), Gaps = 3/323 (0%)

Query  3    MRLSRPRRLMLATLFTCTG--TLASVNTASLVSGAMSPDCISWRISGICYWLLCTPFGCT  60
            M+  R +R +L+ ++   G    A++NTAS+V++++SP CISWRISGICYWL+CTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVTHYIPEAVVSAYLNPGDNPWTEMSAVSATVGGAESLISDALAGVPAGGGRQEM  120
            VKTS+KV H+IPEAVVS+Y  +G+NPWTEMS VS T GG E+ +++AL+G++AGGG QE 
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  KAPGMRKQNLHFYYGDAYGHPATSLIGGMVPGYSCRSAAAPFVPYFVSAMDSLAWRTGIP  180
            K PG RK N++F Y+DA GHP+TS+IGG +PGYSC SAA+P+VPYF+S++D+LAWRTG+P
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESLYPEALIPGKREIGNTFAGEMWGNVYPRSGFVTQTDSYKSAAVVVQRVADIITREGQL  240
            ES+YPEALIPG+REIG+T A ++WGN+YPRSGFVTQ D YKS+A+V QRVADIITR  Q+
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYNPLVGHRSPGYWPPDPVTENTGTKNHKWQRLSPQLSQSCAVFPDTGGQTAERGDYAW  300
            HVY+PL G+ S+GYWPP+PV ENTGT+NHKWQ+LSP LS SC+VFPDT G+ AE G+YAW
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNYAW  299

Query  301  ALWQPYSCCKRRGQTFLYSTDFS  323
            +LWQPYSCCKRRGQTFLYSTD++
Sbjct  300  TLWQPYSCCKRRGQTFLYSTDIN  322

9) SPAB_05391 in NC_010102


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  384 bits (1445),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 215/325 (67%), Positives = 281/325 (87%), Gaps = 5/325 (1%)

Query  1    MKSLSFRPRRLAIATLLVCSG--TMASVNTANLLASAASTDCISWRVSGICYWLLCTPFG  58
            MKSL  R +R  ++ +L+ +G    A++NTA+++AS+ S  CISWR+SGICYWL+CTPFG
Sbjct  1    MKSL--RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFG  58

Query  59   CTVKTSVKVTHFIPEAVVSAYLNPGDNPWTEMATVSDAASGAEGSLLESVTGVSTGGGRQ  118
            CTVKTS+KV HFIPEAVVS+Y  +G+NPWTEM+ VS++A+G E ++  +++G+++GGG Q
Sbjct  59   CTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQ  118

Query  119  EMKAPGERKQNLHFYYGDAYGHPATKVIGGMVPGYSCDSAATPFMPYFNSSLDALVWRTG  178
            E K PG RK N++F Y+DA GHP+T +IGG +PGYSC+SAATP++PYF S+LD+L WRTG
Sbjct  119  EQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  179  VPETLYPEALIPGQREIGETTSGNMWGNVYPRSGFVTQTDSYKSAAVVVQRVADVITRSG  238
            VPE++YPEALIPG+REIG T++ N+WGN+YPRSGFVTQ D YKS+A+V QRVAD+ITR+ 
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  239  QLHVYNPLTGQKSPGYWPPEPVKENTGTKNHKWQRLSPQLSQTCAVFPDTNGQIAQDGNY  298
            Q+HVY+PLTG+ S+GYWPPEPVKENTGT+NHKWQ+LSP LS +C+VFPDT G+IA++GNY
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNY  297

Query  299  AWALWQPYSCCKRRGQTFLSSTDFS  323
            AW+LWQPYSCCKRRGQTFL STD++
Sbjct  298  AWTLWQPYSCCKRRGQTFLYSTDIN  322

10) ECL_00449 in NC_014121


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  380 bits (1430),  Expect = 5e-107, Method: Compositional matrix adjust.
 Identities = 217/319 (69%), Positives = 275/319 (87%), Gaps = 3/319 (0%)

Query  7    RPRRLALATLMVCTG--TMASVNTASLLSSATSPDCISWRISGICYWLFCTPFGCSVKTS  64
            R +R  L+ +++  G    A++NTAS+++S+ SP CISWRISGICYWL CTPFGC+VKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  65   VKVTHFIPEAVVSAYLSPGANPWTEMSAVSSLADSTESTLLGSAAGVATGGGRQEMKAPG  124
            +KV HFIPEAVVS+Y ++G+NPWTEMS VS  A++ E+++ G+ +G+A+GGG QE K PG
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  125  ERKQNLHFYYGDAYGHPATRLIGGMVPGYSCDSAATPFMPYFTSALDALAWRTGVPESLY  184
             RK N++F Y+DA GHP+T +IGG +PGYSC+SAATP++PYF S+LD+LAWRTGVPES+Y
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  185  PEALIPGQREIGSTIGGNMWGNVYPRSGFVTQTDSYKSAAMVVQRVADIITRQGQLHVYS  244
            PEALIPG+REIGST + N+WGN+YPRSGFVTQ D YKS+A+V QRVADIITR  Q+HVY 
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  245  PLTGQRSPGYWPPDPVQENTGTKNHKWQRLSPQLSQSCAVFPDTGGQEAQDGNYAWALWQ  304
            PLTG+ S+GYWPP+PV+ENTGT+NHKWQ+LSP LS SC+VFPDT G+ A++GNYAW+LWQ
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNYAWTLWQ  303

Query  305  PYSCCKRRGQTFLYSTDFS  323
            PYSCCKRRGQTFLYSTD++
Sbjct  304  PYSCCKRRGQTFLYSTDIN  322

11) PAJ_2507 in NC_017531


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  375 bits (1409),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 222/324 (69%), Positives = 279/324 (87%), Gaps = 4/324 (1%)

Query  1    MRLSRPRRLMLATLFTCTG--TLASVNTASLVSGAMSPDCISWRISGICYWLLCTPFGCT  58
            M+  R +R +L+ ++   G    A++NTAS+V++++SP CISWRISGICYWL+CTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  59   VKTSVKVTHYIPEAVVSAYLNPGDNPWTEMSAVSATAGGAESLVSgglagipagggRQEM  118
            VKTS+KV H+IPEAVVS+Y  +G+NPWTEMS VS TAGG E+ V+G+L+G++AGGG QE 
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  119  KAPGMRKQNLHFYYGDAYGHPATSLIGGMVPGYSCRSAATPFVPYFVSAMDALAWRTGIP  178
            K PG RK N++F Y+DA GHP+TS+IGG +PGYSC SAATP+VPYF+S++D+LAWRTG+P
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  179  ESFYPEALIPGKREIGNTFAGEMWGNVYPRSGFVTQTDSYKSAAVVVQRVADIITREGQM  238
            ES YPEALIPG+REIG+T A ++WGN+YPRSGFVTQ D YKS+A+V QRVADIITR  Q+
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  239  HVYNPLKGQRSPGYWPPDSVTENTGTQNHKWQRLSPQLSQSCAVFPDTGGQKTAESGDYA  298
            HVY+PL G+ S+GYWPP++V ENTGTQNHKWQ+LSP LS SC+VFPDTG  K AE+G+YA
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYA  298

Query  299  WALWQPYSCCKRRGQTFLYSTDFS  322
            W+LWQPYSCCKRRGQTFLYSTD++
Sbjct  299  WTLWQPYSCCKRRGQTFLYSTDIN  322

12) PANA5342_3968 in NC_016816


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  373 bits (1403),  Expect = 8e-105, Method: Compositional matrix adjust.
 Identities = 222/323 (69%), Positives = 279/323 (87%), Gaps = 3/323 (0%)

Query  27   MHLSRPRRLMLATLFTCTG--TLASVNTASLVSGAMSPDCISWRISGICYWLLCTPFGCT  84
            M   R +R +L+ ++   G    A++NTAS+V++++SP CISWRISGICYWL+CTPFGCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  85   VKTSVKVTHYIPEAVVSAYLNPGDNPWTEMSAVSATAGGAESlvsgglagvpagggRQEM  144
            VKTS+KV H+IPEAVVS+Y  +G+NPWTEMS VS TAGG E+ V+G+L+G++AGGG QE 
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  145  KAPGMRKQNLHFYYGDAYGHPATSIIGGMVPGYSCRSAATPFVPYFVSAMDSLAWRTGVP  204
            K PG RK N++F Y+DA GHP+TSIIGG +PGYSC SAATP+VPYF+S++D+LAWRTGVP
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  205  ESLYPEALIPGKRDIGNTFAGEMWGNVYPRSGFVTQTDSYKSAAVVVQRVADIITREGQL  264
            ES+YPEALIPG+R+IG+T A ++WGN+YPRSGFVTQ D YKS+A+V QRVADIITR  Q+
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  265  HVYNPLVGQRSPGYWPPDPVTENTGTKNHKWQRLSPQLSQSCAVFPDTGGQTAESGDYAW  324
            HVY+PL G+ S+GYWPP+PV ENTGT+NHKWQ+LSP LS SC+VFPDT G+ AE+G+YAW
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNYAW  299

Query  325  ALWQPYSCCKRRGQTFLYSTDFS  347
            +LWQPYSCCKRRGQTFLYSTD++
Sbjct  300  TLWQPYSCCKRRGQTFLYSTDIN  322

13) ECA0577 in NC_004547


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  369 bits (1385),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 213/320 (67%), Positives = 276/320 (87%), Gaps = 5/320 (1%)

Query  7    RLRPLAVGIMLTTACEPAAIAAVNTAQIVASAISPGCISWRVSGICYWLFCTNFGCTIRT  66
            RL+   +++ML T+      AA+NTA IVAS+ISP+CISWR+SGICYWL CT FGCT++T
Sbjct  5    RLKRALLSVMLITG-GMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKT  63

Query  67   SVKVSHFIPDAVVSTYMAPGGNPWSEMSPVSQGAGGLESTITSGLTGVTAGGGNAADIKD  126
            S+KV HFIP+AVVSTY A+GGNPW+EMS VSQ AGG+E+++T++L+G++AGGGN  + K 
Sbjct  64   SIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ-KF  122

Query  127  PGRRKSNIKFKYADAIGHPASTLIGGQIPGYSCDSVATPLMPYFLSTLDSLAWRTGIPES  186
            PG RKSN++FKYADAIGHP++++IGGQIPGYSC+S ATPL+PYFLSTLD+LAWRTG+PES
Sbjct  123  PGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  187  LYPEALIPGQREVGSMASGNMWGNVYPRSGFIQHTDDDKASAVVAQRVADIITRSGQLHV  246
            +YPEALIPG+RE+GS ++ N+WGN+YPRSGF+ + DD K++A+VAQRVADIITR+ Q+HV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  247  YQPLTGSRRDGYWPPEPVVEN--TNNHKWQRLSPQLTSSCAVFPDGDHMSAENGNAAYAL  304
            Y+PLTG+   GYWPPEPV EN  T+NHKWQ+LSP L+ SC+VFPD + + AENGN A +L
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI-AENGNYAWTL  301

Query  305  WQPYSCCQRRGQRLLSATNF  324
            WQPYSCC+RRGQ +L +T++
Sbjct  302  WQPYSCCKRRGQTFLYSTDI  321

14) Ser39006_1513 in NC_022268


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  364 bits (1367),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 210/300 (70%), Positives = 276/300 (92%), Gaps = 1/300 (0%)

Query  25   ASVNTASLISSAASVSCISWKVKGICYWLLCTPFGCSVKTSVKVEHFIPEAVVSAYSGPG  84
            A++NTAS+++S+ S SCISW++ GICYWL+CTPFGC+VKTS+KV+HFIPEAVVS+Y ++G
Sbjct  24   AALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASG  83

Query  85   DNPWTEMATVSDaagsgesgiigalsgisagggQQEMKAPGLRKQNLHFHYADAYGHPAT  144
            +NPWTEM+ VS++AG+ E+++ GALSG++AGGG+QE K PG RK N++F YADA GHP+T
Sbjct  84   GNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPST  143

Query  145  TLIGGQIAGYSCKSAATPFVPYFVSSLDALVWRSGLPEALYPEALIPGQRELGSQTSANM  204
            ++IGGQI+GYSC+SAATP+VPYF+S+LD+L WR+G+PE++YPEALIPG+RE+GS ++ N+
Sbjct  144  SIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNI  203

Query  205  WGNIYPRSGFVTQEDSYKSAAVVAQRVADVITRTGQLHVYQPLVGQRSPGYWPPEPVEEN  264
            WGN+YPRSGFVTQ+D YKS+A+VAQRVAD+ITRT Q+HVY+PL G+ S+GYWPPEPV EN
Sbjct  204  WGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKEN  263

Query  265  TGTQNHKWQRLSPALSTTCAVFPDTGATVAQDGNYAWALWQPYSCCKRRGQTFLFSTDFS  324
            TGTQNHKWQ+LSP+LS +C+VFPDTG  +A++GNYAW+LWQPYSCCKRRGQTFL+STD++
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPDTG-KIAENGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

15) NT01EI_0353 in NC_012779


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  360 bits (1352),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 215/323 (67%), Positives = 271/323 (84%), Gaps = 7/323 (2%)

Query  8    FRRTLCSAAVATVLGTASIPTALAALNTAQIVASAVTQDCISWRVSGICYWLFCSWYGCT  67
            ++R+L    ++ +L T+++    AALNTA IVAS+++  CISWR+SGICYWL C+ +GCT
Sbjct  6    LKRAL----LSVMLITGGMEVQ-AALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  68   VRTSVKVTHFIPQTVVSTYVAPGGNPWTEMAAVSQTAGGLENAVTGALSGVTAGGANPAD  127
            V+TS+KV HFIP++VVSTY A+GGNPWTEM+ VSQTAGG+ENAVTGALSG++AGG+N  +
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQ-E  119

Query  128  MKNPGQRKSNIRFKYADAIGHPATSLIGGRIPGYSCDSAATPLMPYFLSTLDSIAWRTGV  187
             K PG RKSN+RFKYADAIGHP+TS+IGG+IPGYSC+SAATPL+PYFLSTLD++AWRTGV
Sbjct  120  QKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGV  179

Query  188  PESLYPEALVIGRREIGSQASGNMWGNVYPRSGFVSQSDDDKASAVVAQRVADIITRTGQ  247
            PES+YPEAL+ GRREIGS ++ N+WGN+YPRSGFV+Q DD K++A+VAQRVADIITRT Q
Sbjct  180  PESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQ  239

Query  248  PHVYHELKGPRRDGYWPPGEVTENTGSKNHKWQRLAPSMTRSCAVFPDGSHSAASDNNAA  307
             HVY  L G    GYWPP  V ENTG++NHKWQ+L+P+++ SC+VFPD +   A + N A
Sbjct  240  IHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGK-IAENGNYA  298

Query  308  FALWQPYSCCKRMGQKFLGSTDF  330
             +LWQPYSCCKR GQ FL STD+
Sbjct  299  WTLWQPYSCCKRRGQTFLYSTDI  321

16) UMNK88_5044 in NC_017641


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  360 bits (1352),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 210/324 (65%), Positives = 271/324 (84%), Gaps = 3/324 (0%)

Query  1    MTGLRTRRYAGAFLLWTATVSVAGASLNTAQIVAGAISQSCISWRVSGICYWLHCSWSGC  60
            M +LR +R   + +L T+ + V  A+LNTA IVA++IS SCISWR+SGICYWL C+  GC
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQ-AALNTASIVASSISPSCISWRISGICYWLMCTPFGC  59

Query  61   RVRTSVKVSHFIPEAVVSTYTAPGGNPWREMALVSQASGGVENTISSGIVGLSAGGGNPA  120
             V+TS+KV HFIPEAVVSTY A+GGNPW EM+LVSQ++GGVEN++++++ GL+AGGGN  
Sbjct  60   TVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQ-  118

Query  121  DMKSPGRRKSAIRFKYADALGHPATLLIGGSIPGYSCESAATPLRPYFLSTLDSLAWRTG  180
            + K PG RKS +RFKYADA+GHP+T +IGG IPGYSC+SAATPL PYFLSTLD+LAWRTG
Sbjct  119  EQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  181  MPESLYPEAMIPGRRELGNQRNADMWGNIYPRSGFVSQTDDDKAAALVAQRVADIITRTG  240
            +PES+YPEA+IPGRRE+G+    ++WGN+YPRSGFV+Q DD K++A+VAQRVADIITRT 
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  241  EPHVYQSLKGRKKDGYWPPDAVEENTGTRNHKWQRLTPSVSSSCAVFPDGSHAAPEDGNA  300
            + HVY++L G    GYWPP++V ENTGT+NHKWQ+L+P++S SC+VFPD +  A E+GN 
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIA-ENGNY  297

Query  301  AFALWRPYSCCKKRGQKFLGSTNF  324
            A +LW+PYSCCK+RGQ FL ST++
Sbjct  298  AWTLWQPYSCCKRRGQTFLYSTDI  321

17) XNC1_3573 in NC_014228


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  358 bits (1343),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 212/322 (66%), Positives = 266/322 (83%), Gaps = 1/322 (0%)

Query  1    MKTSRLAFPVVITLAAAFTPFSQATLNTAQIVASSISPACIQWRVSGICYWLFCSWHGCT  60
            MK+ RL  +++  +  +     QA+LNTA IVASSISP+CI WR+SGICYWL C+  GCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVTHFLPQAVVSTYHAPGGNPWSEMAHISPLSGGLETVVTRALSGLTTGGGNHTV  120
            VKTS+KV HF+P+AVVSTY+A+GGNPW+EM+ +S  +GG+E  VT ALSGL++GGGN+  
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  QVAGKRSPRLRFKYADAIGHPATTLIGGQIPGYSCKSVATPLMPYFLSTLDTVAWRSGLP  180
            + +G R + +RFKYADAIGHP+T++IGGQIPGYSC+S ATPL+PYFLSTLDT+AWR+G+P
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESLYPEALIPGLRELGSTMAGNMWGNLYPRSGFVTQVDDDKAASVVAQRVADIITRTGQP  240
            ES+YPEALIPG RE+GST A N+WGNLYPRSGFVTQ DD K++++VAQRVADIITRT Q 
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYQPLAGQRRDGYWPPVPVTENTGTKNHQWQRLSPQLSQSCAVFPDGRHTAAADSHQAY  300
            HVY+PL+G+   GYWPP PV ENTGT+NH+WQ+LSP LS SC+VFPD    A  ++  A 
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNY-AW  299

Query  301  ALWQPYSCCQRRGQRFLGSTDL  322
            +LWQPYSCC+RRGQ FL STD+
Sbjct  300  TLWQPYSCCKRRGQTFLYSTDI  321

18) CFSAN002050_22250 in NC_021818


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  357 bits (1341),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 203/293 (70%), Positives = 253/293 (87%), Gaps = 2/293 (0%)

Query  38   IIASAVSQNCISWRVSGICYWLFCTPFGCKVRTSVKVTHFIPQAVVSTYVAPGGNPWQEM  97
            I+AS++S +CISWR+SGICYWL CTPFGC V+TS+KV HFIP+AVVSTY A+GGNPW EM
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  98   AFVSQTAGGLESAVTSGLSGVSAGGANPADMKNPGQRKSAVRFKYADAIGHPATSLIGGS  157
            ++VSQTAGG+E+AVT++LSG++AGG+N  + K PG RKS VRFKYADAIGHP+TS+IGG 
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQ-EQKFPGTRKSNVRFKYADAIGHPSTSIIGGQ  149

Query  158  IPGYSCDTAATPLMPYFLSTLDSAAWRTGVPESLYPEALVPGQREIGSQAAANMWGNIYP  217
            IPGYSC++AATPL+PYFLSTLD+ AWRTGVPES+YPEAL+PG+REIGS +A N+WGN+YP
Sbjct  150  IPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYP  209

Query  218  RSGFISQTDDDKASAVVAQRVADIITRAGQPHVYQVLQGSHHDGYWPPGEVTENTGTRNH  277
            RSGF++Q DD K++A+VAQRVADIITR+ Q HVY+ L G+   GYWPP  V ENTGT+NH
Sbjct  210  RSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNH  269

Query  278  KWQRLAPHMTQSCAVFPDGSYTAASDNNEAFAFWQPYSCCKKRGQKFLGSTDI  330
            KWQ+L+P ++ SC+VFPD +   A + N A ++WQPYSCCK+RGQ FL STDI
Sbjct  270  KWQQLSPTLSMSCSVFPDTG-KIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

19) EbC_pEb10200460 in NC_014304


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  356 bits (1336),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 198/293 (68%), Positives = 254/293 (87%), Gaps = 3/293 (1%)

Query  34   GIIASAITQDCISWRVSGLCYWLMCTPFGCSVKTSVKVTHFIPEVVVSTYTGPGGNPWTE  93
            +I+AS+I+  CISWR+SG+CYWLMCTPFGC+VKTS+KV HFIPE VVSTY ++GGNPWTE
Sbjct  30   SIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTE  89

Query  94   MAFMSGASGTIDNALTSGAP--AGGGNAGDIKNPGQRKSNIKFKYADAIGHPATSVIGGS  151
            M+++S ++G ++NA+T++ +  A+GG   + K PG RKSN++FKYADAIGHP+TS+IGG 
Sbjct  90   MSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQ  149

Query  152  IAGYSCDTAATPFNPYFLSTLDSLVWRSGLPESLYPEALVSGQRELGSQASANMWGNIYP  211
            I+GYSC++AATP+ PYFLSTLD+L WR+G+PES+YPEAL++G+RE+GS ++ N+WGN+YP
Sbjct  150  IPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYP  209

Query  212  RSGFVSQADDDKASAVVAQRVADIITRSGQPHVYQVLKGTHKAGYWPPGEVKENTGTANH  271
            RSGFV+Q DD K++A+VAQRVADIITR+ Q HVY+ L G   AGYWPP  VKENTGT NH
Sbjct  210  RSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNH  269

Query  272  KWQRLSPTLSASCAVFPDGAYPIAQDGNEAYALWQPYSCCKRRGQTFLYSTDF  324
            KWQ+LSPTLS SC+VFPD +  IA++GN A +LWQPYSCCKRRGQTFLYSTD+
Sbjct  270  KWQQLSPTLSMSCSVFPDTG-KIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

20) EPYR_03262 in NC_017390


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  355 bits (1335),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 214/319 (68%), Positives = 275/319 (87%), Gaps = 3/319 (0%)

Query  7    RPRRLALATIMACSG--TLASVNTAGLLASAASPDCISWRVSGICYWLMCTPLGCTVKTS  64
            R +R  L+ ++  +G    A++NTA+++AS+ SP CISWR+SGICYWLMCTP+GCTVKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  65   VKVTHFIPQAVVSAWLSPGDNPWTEMSALSATADgaesvllggaagvatgggRQEMKVPG  124
            +KV HFIP+AVVS+  ++G+NPWTEMS +S TA+G E+ + G+ +G+A+GGG QE K PG
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  125  MRSQNLHFYYAGAYGHPATKIIGGMVPGYSCDSAATPFIPYFVSALDALAWRTGVPESVY  184
             R  N++F YA+A GHP+T IIGG +PGYSC+SAATP++PYF+S+LD+LAWRTGVPESVY
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  185  PEALIPGQREVGSTPSGNMWGNVYPRSGFVTQTDGYKSAAVVVQRVADIITRQGQLHVYN  244
            PEALIPG+RE+GST++ N+WGN+YPRSGFVTQ D+YKS+A+V QRVADIITR  Q+HVY+
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  245  PLVGQRSAGYWPPGAVSENSGSKNHKWQRLSPRLSQSCAVFPDVGGQIAQNGNYAWALWQ  304
            PL G+ SAGYWPP +V EN+G++NHKWQ+LSP LS SC+VFPD  G+IA+NGNYAW+LWQ
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNYAWTLWQ  303

Query  305  PYSCCKRRGQTFLYSTDFS  323
            PYSCCKRRGQTFLYSTD++
Sbjct  304  PYSCCKRRGQTFLYSTDIN  322

21) EpC_30230 in NC_012214


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  355 bits (1335),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 214/319 (68%), Positives = 275/319 (87%), Gaps = 3/319 (0%)

Query  7    RPRRLALATIMACSG--TLASVNTAGLLASAASPDCISWRVSGICYWLMCTPLGCTVKTS  64
            R +R  L+ ++  +G    A++NTA+++AS+ SP CISWR+SGICYWLMCTP+GCTVKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  65   VKVTHFIPQAVVSAWLSPGDNPWTEMSALSATADgaesvllggaagvatgggRQEMKVPG  124
            +KV HFIP+AVVS+  ++G+NPWTEMS +S TA+G E+ + G+ +G+A+GGG QE K PG
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  125  MRSQNLHFYYAGAYGHPATKIIGGMVPGYSCDSAATPFIPYFVSALDALAWRTGVPESVY  184
             R  N++F YA+A GHP+T IIGG +PGYSC+SAATP++PYF+S+LD+LAWRTGVPESVY
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  185  PEALIPGQREVGSTPSGNMWGNVYPRSGFVTQTDGYKSAAVVVQRVADIITRQGQLHVYN  244
            PEALIPG+RE+GST++ N+WGN+YPRSGFVTQ D+YKS+A+V QRVADIITR  Q+HVY+
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  245  PLVGQRSAGYWPPGAVSENSGSKNHKWQRLSPRLSQSCAVFPDVGGQIAQNGNYAWALWQ  304
            PL G+ SAGYWPP +V EN+G++NHKWQ+LSP LS SC+VFPD  G+IA+NGNYAW+LWQ
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNYAWTLWQ  303

Query  305  PYSCCKRRGQTFLYSTDFS  323
            PYSCCKRRGQTFLYSTD++
Sbjct  304  PYSCCKRRGQTFLYSTDIN  322

22) plu1087 in NC_005126


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  355 bits (1334),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 211/319 (67%), Positives = 271/319 (85%), Gaps = 2/319 (0%)

Query  14   RLKKFGMVLILTVVLAPVAVASVNTAQivssaasvscisWRIKGLCYWLLCSPWGCKVRT  73
            RLK+ +++ ++ +  +    A++NTA IV+S+ S SCISWRI G+CYWL+C+P GC V+T
Sbjct  5    RLKR-ALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKT  63

Query  74   SIKVAHFIPQAVVSVYNAPGGNPWREMSLVSQTVDGVENAVTRALSGIAVGGGNHQLKIP  133
            SIKV HFIP+AVVS Y+A+GGNPW EMSLVSQT +GVENAVT ALSG+A GGGN++ K+P
Sbjct  64   SIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFP  123

Query  134  GNRKNNLHFKYADAIGHPATAMMGGKISGYACKSAATPFMPYFLSTLDSLVWRTGVPESF  193
            G RK+N++FKYADAIGHP+T+++GG+I+GY+C+SAATP++PYFLSTLD+L WRTGVPES 
Sbjct  124  GTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESV  183

Query  194  YPEALIPGKRELGNSFRGNMWGNVYPRSGFVTQQDDNKAAAVVAQRVADIITRTGQGHVY  253
            YPEALIPG+RE+G++   N+WGN+YPRSGFVTQQDD K++A+VAQRVADIITRT Q HVY
Sbjct  184  YPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVY  243

Query  254  QSLQGNHKQGYWPPGEVVENTVNQNHQWQRIAPKMSTSCAVFPDNSGEAAKDGNYVFALW  313
            ++L GN   GYWPP  V ENT  QNH+WQ+++P +S SC+VFPD +G  A +GNY  +LW
Sbjct  244  KPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPD-TGKIAENGNYAWTLW  302

Query  314  QPYSCCQRRGQTFLYSTDF  332
            QPYSCC+RRGQTFLYSTD+
Sbjct  303  QPYSCCKRRGQTFLYSTDI  321

23) YPZ3_0322 in NC_014029


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  353 bits (1325),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 203/283 (72%), Positives = 251/283 (89%), Gaps = 1/283 (0%)

Query  53   CISWRVSGICYWLLCTPFGCKVRTSVKVTHFIPEAVVSAYNTQGGNPWSEMSMVSQAAGG  112
            CISWR+SGICYWL+CTPFGC V+TS+KV HFIPEAVVS+Y++ GGNPW+EMS+VSQ+AGG
Sbjct  40   CISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGG  99

Query  113  LESRITSALSGVSAGGGNNELKTPGQRKTNLHFKYADAIGHPATSLIGGSIAGYSCRTAA  172
            +E+ +T+ALSG++AGGGN+E K PG RK+N++FKYADAIGHP+TS+IGG I+GYSC +AA
Sbjct  100  VENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAA  159

Query  173  TPLVPYFLSTLDSLAWRTGMPESLYPEALIPGQREVGSQAAANMWGNVYPRSGFVTQVDD  232
            TPLVPYFLSTLD+LAWRTG+PES+YPEALIPG+RE+GS +A N+WGN+YPRSGFVTQ DD
Sbjct  160  TPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDD  219

Query  233  DKAGALVAQRVADIITRSGQAHVYQPLMGQRSEGYWPPGAVQENTGTSNHKWQRLAPQLS  292
             K+GA+VAQRVADIITR+ Q HVY+PL G+ S GYWPP +V+ENTGT NHKWQ+L+P LS
Sbjct  220  YKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLS  279

Query  293  QSCAVFpdgdhppaadanaafaLWQPYSCCQRRGQRFLYSTDF  335
             SC+VF  +    A ++N A +LWQPYSCC+RRGQ FLYSTD+
Sbjct  280  MSCSVF-PDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

24) KPHS_44900 in NC_016845


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  353 bits (1324),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 192/319 (61%), Positives = 260/319 (82%), Gaps = 12/319 (3%)

Query  4    RFAYPLAALLMAGSAVPASASLTTPQLVASAACPDCIDYRVVGVCYWLLCTPFGCSVKTS  63
            R+  +L ++++  +++   A+L T+ +VAS+  P CI  R+ G+CYWL+CTPFGC+VKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  64   VKVRHFIPQVVVSAYRQPGDNPWREVAMLSRSA----------LGGLADGGGENQQK-RG  112
            +KV+HFIP+ VVS+Y+ +G+NPW E++++S++A          L+GLA GGG+++QK  G
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  113  QRKDNVRYRSVDAIGHPAASLIGQQTSGYSCKGAATAWQPYFLSNLDALMWRTGLPESVY  172
             RK NVR++  DAIGHP++S+IG Q +GYSC++AAT+  PYFLS LD+L WRTG+PESVY
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  173  PEALTPGRREIGATTAGNMWGNVYPRSGFVTQTDDYKAAAVTAQRAADIITRPGQIHVYR  232
            PEAL PGRREIG+T+A N+WGN+YPRSGFVTQ DDYK++A+ AQR ADIITR  QIHVY+
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  233  TLKANASAGYWPPDPVTENTGTRNHKWQRLAPKVSMSCAAFPDRAFSYAEDGNYAWALWQ  292
             L +N+SAGYWPP+PV ENTGT+NHKWQ+L+P +SMSC+ FPD +   AE+GNYAW+LWQ
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG-KIAENGNYAWTLWQ  303

Query  293  PFACCKKRGQTFLFSTDIG  311
            P++CCK+RGQTFL+STDI 
Sbjct  304  PYSCCKRRGQTFLYSTDIN  322

25) N559_0815 in NC_022082


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  353 bits (1324),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 192/319 (61%), Positives = 260/319 (82%), Gaps = 12/319 (3%)

Query  4    RFAYPLAALLMAGSAVPASASLTTPQLVASAACPDCIDYRVVGVCYWLLCTPFGCSVKTS  63
            R+  +L ++++  +++   A+L T+ +VAS+  P CI  R+ G+CYWL+CTPFGC+VKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  64   VKVRHFIPQVVVSAYRQPGDNPWREVAMLSRSA----------LGGLADGGGENQQK-RG  112
            +KV+HFIP+ VVS+Y+ +G+NPW E++++S++A          L+GLA GGG+++QK  G
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  113  QRKDNVRYRSVDAIGHPAASLIGQQTSGYSCKGAATAWQPYFLSNLDALMWRTGLPESVY  172
             RK NVR++  DAIGHP++S+IG Q +GYSC++AAT+  PYFLS LD+L WRTG+PESVY
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  173  PEALTPGRREIGATTAGNMWGNVYPRSGFVTQTDDYKAAAVTAQRAADIITRPGQIHVYR  232
            PEAL PGRREIG+T+A N+WGN+YPRSGFVTQ DDYK++A+ AQR ADIITR  QIHVY+
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  233  TLKANASAGYWPPDPVTENTGTRNHKWQRLAPKVSMSCAAFPDRAFSYAEDGNYAWALWQ  292
             L +N+SAGYWPP+PV ENTGT+NHKWQ+L+P +SMSC+ FPD +   AE+GNYAW+LWQ
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG-KIAENGNYAWTLWQ  303

Query  293  PFACCKKRGQTFLFSTDIG  311
            P++CCK+RGQTFL+STDI 
Sbjct  304  PYSCCKRRGQTFLYSTDIN  322

26) PMI2573 in NC_010554


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 197/283 (70%), Positives = 239/283 (85%), Gaps = 1/283 (0%)

Query  42   CISWRISGICYWLKCGWGGCRIRTSVRVSHFIPQAVVSAYHAPGENPWREMSLVSGAAGG  101
            CISWRISGICYWL C   GC ++TS++V HFIP+AVVS+Y+A+G NPW EMSLVS +AGG
Sbjct  40   CISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGG  99

Query  102  IENAVTGVLSGVSAGGGNSEQKFEAKRKTALHFFYADAIGHPATTLIGGSIPGYSCDSAA  161
            +ENAVTG LSG++AGGGN EQKF + RK+ ++F YADAIGHP+T++IGG IPGYSC+SAA
Sbjct  100  VENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAA  159

Query  162  TPLFPYYLSTLDSVPWRLGVPEMAYPEAIIPGKREIGGQSRGNMWGNLYPRSGFVNQQDG  221
            TPL PY+LSTLD+++WR GVPE  YPEA+IPG+REIG+ S  N+WGNLYPRSGFV QQD+
Sbjct  160  TPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDD  219

Query  222  DKAAAVVAQRVADIMTRTGQAHTYVPLKGNRRDGYWPPDAVTENTGTKNHKWQRLSPGLK  281
             K++A+VAQRVADI+TRT Q H Y PL GN   GYWPP++V ENTGT+NHKWQ+LSP L 
Sbjct  220  YKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLS  279

Query  282  NSCAVFPDEGGAQAQDGNYAWALWQPYSCCKRMGQKFLYSTTF  324
             SC+VFPD G   A++GNYAW+LWQPYSCCKR GQ FLYST +
Sbjct  280  MSCSVFPDTGKI-AENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

27) ECED1_3557 in NC_011745


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  351 bits (1320),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 192/293 (66%), Positives = 250/293 (86%), Gaps = 2/293 (0%)

Query  32   IVASAAAPDCISWRVSGICYWLYCSGFSCKVRTSVKVTHYIPEVVVSTYTAPGGNPWKEM  91
            IVAS+ +P CISWR+SGICYWL C+ F+C V+TS+KV H+IPE VVSTY A+GGNPW EM
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  92   ALVSQTAGGVENSITKGLAGLSAGGGNPADMKAQGERRSAIRFKYADALGHPATRLIGGM  151
            +LVSQTAGGVEN++T +L+GL+AGGGN  + K  G R+S +RFKYADA+GHP+T +IGG 
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQ-EQKFPGTRKSNVRFKYADAIGHPSTSIIGGQ  149

Query  152  VPGFSCDSPVTPAMPYFLSTLDSLVWRTGMPESLYPEALIPGKREIGSQAEENLWGSVYP  211
            +PG+SC+S+ TP +PYFLSTLD+L WRTG+PES+YPEALIPG+REIGS + +N+WG++YP
Sbjct  150  IPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYP  209

Query  212  RSGFVMQTDDDKAAAVVAQRVADIISRTGEPHVYKSIQTRKKDGFWPPDPVEENTDTRNH  271
            RSGFV Q DD K++A+VAQRVADII+RT + HVYK++      G+WPP+PV ENT+T+NH
Sbjct  210  RSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNH  269

Query  272  KWQRLTPSVSRSCAVFPDGDHQAAEDGNAAFALWQPYSCCKKRGQTFLGSTNF  324
            KWQ+L+P++S SC+VFPD + + AE+GN A +LWQPYSCCK+RGQTFL ST++
Sbjct  270  KWQQLSPTLSMSCSVFPDTG-KIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

28) Spro_4074 in NC_009832


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  348 bits (1306),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 200/283 (71%), Positives = 251/283 (89%), Gaps = 1/283 (0%)

Query  53   CISWRVSGICYWLLCTPFGCKVLTSVKVTHFIPEAVVSAYNTQGGNPWSEMSMVSQAAGG  112
            CISWR+SGICYWL+CTPFGC V TS+KV HFIPEAVVS+Y++ GGNPW+EMS+VSQ+AGG
Sbjct  40   CISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGG  99

Query  113  LESSITSALSGVSAGGGNNELKTPGQRKTNLHFKYADAIGHPATSLIGGSIAGYSCRTAA  172
            +E+++T+ALSG++AGGGN+E K PG RK+N++FKYADAIGHP+TS+IGG I+GYSC +AA
Sbjct  100  VENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAA  159

Query  173  TPFVPYFLSTLDSLAWRTAMPESLYPEALVPGQREVGSQAAANMWGNVYPRSGFVTQVDD  232
            TP+VPYFLSTLD+LAWRT++PES+YPEAL+PG+RE+GS +A N+WGN+YPRSGFVTQ DD
Sbjct  160  TPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDD  219

Query  233  DKAGALVAQRVADIITRSGQPHVYQPLMGQRSEGYWPPGAVQENTGTSNHKWQRLAPQLS  292
             K+GA+VAQRVADIITR+ Q HVY+PL G+ S GYWPP +V+ENTGT NHKWQ+L+P LS
Sbjct  220  YKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLS  279

Query  293  QSCAVFpdgdhppaadanaafaLWQPYSCCQRRGQRFLYSTDF  335
             SC+VF  +    A ++N A +LWQPYSCC+RRGQ FLYSTD+
Sbjct  280  MSCSVF-PDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

29) Spro_4164 in NC_009832


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  347 bits (1302),  Expect = 6e-97, Method: Compositional matrix adjust.
 Identities = 209/300 (70%), Positives = 262/300 (88%), Gaps = 1/300 (0%)

Query  36   NAVLNsaqivasavsqaCISWRVSGICYWLLCTPFGCKVRTSVKVTHFIPEAVVSAYNTQ  95
            +A LN+A IVAS++S +CISWR+SGICYWL+CTPFGC V+TS+KV HFIPEAVVS+Y++ 
Sbjct  23   QAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQAS  82

Query  96   GGNPWSEMSMVSQAAGGLESSITNALSGVSAGGGNNELKTSGERKTNLHFKYADAIGHPA  155
            GGNPW+EMS+VSQ+AGG+E+++T ALSG++AGGGN+E K +G RK+N++FKYADAIGHP+
Sbjct  83   GGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPS  142

Query  156  TSLIGGSIAGYSCRSAATPFVPYFLSTLDSLAWRTGIPESLYPEALVPGMREVGSQAAAN  215
            TS+IGG I+GYSC SAATP+VPYFLSTLD+LAWRTG+PES+YPEAL+PG RE+GS +A N
Sbjct  143  TSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  216  MWGNVYPRSGFVTQVDDDKVGALVAQRVADIITRSGQPHVYQPLIGQRSEGYWPPGAVTE  275
            +WGN+YPRSGFVTQ DD K GA+VAQRVADIITR+ Q HVY+PL G+ S GYWPP +V E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  276  NTGTNNHKWQRLAPQLSQSCAVFpdgdyppaadanaafaLWQPYSCCQRRGQRFLSSTDF  335
            NTGT+NHKWQ+L+P LS SC+VF  +    A ++N A +LWQPYSCC+RRGQ FL STD+
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVF-PDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

30) Spro_0349 in NC_009832


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  346 bits (1301),  Expect = 9e-97, Method: Compositional matrix adjust.
 Identities = 201/283 (72%), Positives = 248/283 (88%), Gaps = 1/283 (0%)

Query  53   CISWRVSGICYWLLCTPFGCKVRTSVKVTHFIPEAVVSAYNTQGGNPWREMSMVSQAAGG  112
            CISWR+SGICYWL+CTPFGC V+TS+KV HFIPEAVVS+Y++ GGNPW EMS+VSQ+AGG
Sbjct  40   CISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGG  99

Query  113  LESSITSALSGVSAGGGNNELKTPGERKTNLHFKYADAIGHPATSLIGGSIAGYSCRSAA  172
            +E+++T+ALSG++AGGGN+E K PG RK+N++FKYADAIGHP+TS+IGG I+GYSC SAA
Sbjct  100  VENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAA  159

Query  173  TPFVPYFLSTLDSLAWRTGIPESLYPEALVPGMREVGSQAAANMWGNVYPRSGFVTQVDD  232
            TP+VPYFLSTLD+LAWRTG+PES+YPEAL+PG RE+GS +A N+WGN+YPRSGFVTQ DD
Sbjct  160  TPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDD  219

Query  233  DKVGALVAQRVADIITRSGQPHVYQPLIGQRSEGYWPPGAVTENTGTNNHKWQRLAPQLS  292
             K GA+VAQRVADIITR+ Q HVY+PL G+ S GYWPP +V ENTGT+NHKWQ+L+P LS
Sbjct  220  YKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLS  279

Query  293  QSCAVFpdgdhppaadanaafaLWQPYSCCQRRGQRFLSSTDF  335
             SC+VF  +    A ++N A +LWQPYSCC+RRGQ FL STD+
Sbjct  280  MSCSVF-PDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

31) SerAS12_0300 in NC_015566


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  344 bits (1290),  Expect = 6e-96, Method: Compositional matrix adjust.
 Identities = 198/283 (70%), Positives = 248/283 (88%), Gaps = 1/283 (0%)

Query  53   CISWRVSGICYWLLCTPFGCKVRTSVKVTHYIPEAVVSAYNTQGGNPWREMSMVSQAAGG  112
            CISWR+SGICYWL+CTPFGC V+TS+KV H+IPEAVVS+Y++ GGNPW EMS+VSQ+AGG
Sbjct  40   CISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGG  99

Query  113  LESSITSGLSGVSAGGGNNELKTPGERKTNLHFKYADAIGHPATSLIGGSIAGYSCRSAA  172
            +E+++T++LSG++AGGGN+E K PG RK+N++FKYADAIGHP+TS+IGG I+GYSC SAA
Sbjct  100  VENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAA  159

Query  173  TPFVPYFLSTLDSLAWRTGIPESLYPEALVPGMREVGSQAAANMWGNVYPRSGFVTQVDD  232
            TP+VPYFLSTLD+LAWRTG+PES+YPEAL+PG RE+GS +A N+WGN+YPRSGFVTQ DD
Sbjct  160  TPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDD  219

Query  233  DKAGALVAQRVADIITRSGQPHVYQLLMGQRSEGYWPPGAVTENTGTNNHKWQRLAPQLS  292
             K+GA+VAQRVADIITR+ Q HVY+ L G+ S GYWPP +V ENTGT+NHKWQ+L+P LS
Sbjct  220  YKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLS  279

Query  293  QSCAVFpdgdhppaadanaafaLWQPYSCCQRRGQRFLSSTDF  335
             SC+VF  +    A ++N A +LWQPYSCC+RRGQ FL STD+
Sbjct  280  MSCSVF-PDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

32) SerAS13_0299 in NC_017573


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  344 bits (1290),  Expect = 6e-96, Method: Compositional matrix adjust.
 Identities = 198/283 (70%), Positives = 248/283 (88%), Gaps = 1/283 (0%)

Query  53   CISWRVSGICYWLLCTPFGCKVRTSVKVTHYIPEAVVSAYNTQGGNPWREMSMVSQAAGG  112
            CISWR+SGICYWL+CTPFGC V+TS+KV H+IPEAVVS+Y++ GGNPW EMS+VSQ+AGG
Sbjct  40   CISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGG  99

Query  113  LESSITSGLSGVSAGGGNNELKTPGERKTNLHFKYADAIGHPATSLIGGSIAGYSCRSAA  172
            +E+++T++LSG++AGGGN+E K PG RK+N++FKYADAIGHP+TS+IGG I+GYSC SAA
Sbjct  100  VENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAA  159

Query  173  TPFVPYFLSTLDSLAWRTGIPESLYPEALVPGMREVGSQAAANMWGNVYPRSGFVTQVDD  232
            TP+VPYFLSTLD+LAWRTG+PES+YPEAL+PG RE+GS +A N+WGN+YPRSGFVTQ DD
Sbjct  160  TPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDD  219

Query  233  DKAGALVAQRVADIITRSGQPHVYQLLMGQRSEGYWPPGAVTENTGTNNHKWQRLAPQLS  292
             K+GA+VAQRVADIITR+ Q HVY+ L G+ S GYWPP +V ENTGT+NHKWQ+L+P LS
Sbjct  220  YKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLS  279

Query  293  QSCAVFpdgdhppaadanaafaLWQPYSCCQRRGQRFLSSTDF  335
             SC+VF  +    A ++N A +LWQPYSCC+RRGQ FL STD+
Sbjct  280  MSCSVF-PDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

33) SerAS9_0300 in NC_015567


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  344 bits (1290),  Expect = 6e-96, Method: Compositional matrix adjust.
 Identities = 198/283 (70%), Positives = 248/283 (88%), Gaps = 1/283 (0%)

Query  53   CISWRVSGICYWLLCTPFGCKVRTSVKVTHYIPEAVVSAYNTQGGNPWREMSMVSQAAGG  112
            CISWR+SGICYWL+CTPFGC V+TS+KV H+IPEAVVS+Y++ GGNPW EMS+VSQ+AGG
Sbjct  40   CISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGG  99

Query  113  LESSITSGLSGVSAGGGNNELKTPGERKTNLHFKYADAIGHPATSLIGGSIAGYSCRSAA  172
            +E+++T++LSG++AGGGN+E K PG RK+N++FKYADAIGHP+TS+IGG I+GYSC SAA
Sbjct  100  VENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAA  159

Query  173  TPFVPYFLSTLDSLAWRTGIPESLYPEALVPGMREVGSQAAANMWGNVYPRSGFVTQVDD  232
            TP+VPYFLSTLD+LAWRTG+PES+YPEAL+PG RE+GS +A N+WGN+YPRSGFVTQ DD
Sbjct  160  TPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDD  219

Query  233  DKAGALVAQRVADIITRSGQPHVYQLLMGQRSEGYWPPGAVTENTGTNNHKWQRLAPQLS  292
             K+GA+VAQRVADIITR+ Q HVY+ L G+ S GYWPP +V ENTGT+NHKWQ+L+P LS
Sbjct  220  YKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLS  279

Query  293  QSCAVFpdgdhppaadanaafaLWQPYSCCQRRGQRFLSSTDF  335
             SC+VF  +    A ++N A +LWQPYSCC+RRGQ FL STD+
Sbjct  280  MSCSVF-PDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

34) XBJ1_1497 in NC_013892


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  341 bits (1280),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 210/322 (66%), Positives = 271/322 (85%), Gaps = 1/322 (0%)

Query  1    MNTSRLAFPVVITLAAACAPVTQAAINTAQIVAGSLSPACIQWQVSGICYWLFCSWHGCT  60
            M++ RL  +++  +  + +   QAA+NTA IVA+S+SP+CI W++SGICYWL C+  GCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVTHFLPQAVVSTYHAPGGNPWSEMAHISPLSGGLENAVtgalsglttgggNHTV  120
            VKTS+KV HF+P+AVVSTY+A+GGNPW+EM+ +S  +GG+ENAVTGALSGL++GGGN+  
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  121  QVAGKRSPRLRFKYADAIGHPATTLIGGQIPGYSCRSAATPLMPYFLSTLDTVAWRSGLP  180
            + +G R + +RFKYADAIGHP+T++IGGQIPGYSC SAATPL+PYFLSTLDT+AWR+G+P
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  181  ESLYPEALVPGLRELGSQPVGNMWGNLYPRSGFVTQADEDKAAAVVAQRVADIITRTGQP  240
            ES+YPEAL+PG RE+GS +  N+WGNLYPRSGFVTQ D+ K++A+VAQRVADIITRT Q 
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  241  HVYQPLAGQRRDGYWPPEPMQENTGTKNHQWQRLSPQLSQSCAVFPDGRHTAAADSNQAY  300
            HVY+PL+G+   GYWPPEP++ENTGT+NH+WQ+LSP LS SC+VFPD     A ++N A 
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI-AENGNYAW  299

Query  301  ALWQPYSCCQRRGQRFLGSTAI  322
            +LWQPYSCC+RRGQ FL ST I
Sbjct  300  TLWQPYSCCKRRGQTFLYSTDI  321

35) YpsIP31758_3701 in NC_009708


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  340 bits (1275),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 182/275 (67%), Positives = 239/275 (87%), Gaps = 5/275 (1%)

Query  44   WKVKGICYWLLCTPLGCSVKTSVKVEHFIPEAVVSAYSGPGDNPWVEMAAVSRAASGAES  103
            W++ GICYWL+CTP+GC+VKTS+KV+HFIPEAVVS+Y ++G+NPW EM+ VS++A+G E+
Sbjct  43   WRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVEN  102

Query  104  GITGMLTgggq----qqMKAPGLRQQNLRYHYADAYGHPATSLMGGNIAGYSCRSAATPF  159
            ++TG L+G +     Q+ K PG R+ N+R+ YADA GHP+TS++GG+I+GYSC SAATP+
Sbjct  103  AVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPL  162

Query  160  APYFVSALDALVWRSGLPESLYPEALIPGQRELGRQSNANMWGNIYPRSGFVIQQDSYKS  219
             PYF+S+LD+L WR+G+PES+YPEALIPG+RE+G  S  N+WGN+YPRSGFV QQD YKS
Sbjct  163  VPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKS  222

Query  220  AAVVAQRVADIITRHGQLHVYHPLVGQPSPGYWPPDPVRENTGSQNHKWQRLEPQLSTAC  279
            +A+VAQRVADIITR  Q+HVY PL G+PS+GYWPP+PV+ENTG+QNHKWQ+L P LS +C
Sbjct  223  GAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSC  282

Query  280  AIFPEANGPIAQSGNYAWALWQPYSCCKRRGQTFL  314
            ++FP++ G IA++GNYAW+LWQPYSCCKRRGQTFL
Sbjct  283  SVFPDT-GKIAENGNYAWTLWQPYSCCKRRGQTFL  316

36) YE3467 in NC_008800


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  332 bits (1246),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 180/275 (66%), Positives = 239/275 (87%), Gaps = 5/275 (1%)

Query  44   WKVKGICYWLLCTPLGCSVKTSVKVEHFTPQVVVSAYNGSGDNPWMEMAAVSRAASGVES  103
            W++ GICYWL+CTP+GC+VKTS+KV+HF P+ VVS+Y++SG+NPW EM+ VS++A+GVE+
Sbjct  43   WRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVEN  102

Query  104  GITGMFTgggq----qqMKAPGLRQQNLRYHYADAYGHPATSLMGGHIAGYSCRSAATPF  159
            ++TG ++G +     Q+ K PG R+ N+R+ YADA GHP+TS++GG+I+GYSC SAATP+
Sbjct  103  AVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPL  162

Query  160  APYFVSALDALVWRSGLPESLYPEALIPGQRELGRQSNANMWGNIYPRSGFVTQQDSYKS  219
             PYF+S+LD+L WR+G+PES+YPEALIPG+RE+G  S  N+WGN+YPRSGFVTQQD YKS
Sbjct  163  VPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKS  222

Query  220  AAVVAQRVADIITRYGQLHVYQPLVGQSSLGYWPPESVRENTGNQNHKWQRLEPRLSTTC  279
            +A+VAQRVADIITR  Q+HVY+PL G++S GYWPPE+V+ENTG QNHKWQ+L P LS +C
Sbjct  223  GAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSC  282

Query  280  AIFPDANGPIAQDGNYAWALWQPYSCCKRRGQTLL  314
            ++FPD+ G IA++GNYAW+LWQPYSCCKRRGQT+L
Sbjct  283  SVFPDT-GKIAENGNYAWTLWQPYSCCKRRGQTFL  316

37) XNC1_3471 in NC_014228


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  325 bits (1219),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 189/287 (66%), Positives = 244/287 (86%), Gaps = 4/287 (1%)

Query  1    MKTSRLAFPVVITLVAAFAPFSQATLNTAQIVAGSVSPACIQWRVSGICYWLFCSWHGCT  60
            MK+ RL  +++  ++ + +   QA+LNTA IVA+S+SP+CI WR+SGICYWL C+  GCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVTHFLPQAVVSTYHAPGGNPWSEMAQISPLSGGLENA----LSGLTTGGGNHTV  116
            VKTS+KV HF+P+AVVSTY+A+GGNPW+EM+ +S  +GG+ENA    LSGL++GGGN+  
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  117  QVAGKQSTHLRFKYADAIGHPATTLIGGQIPGYSCRSAATPLMPYFLSTLDTVAWRSGLP  176
            + +G + +++RFKYADAIGHP+T++IGGQIPGYSC SAATPL+PYFLSTLDT+AWR+G+P
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVP  180

Query  177  ESLYPEALVPGLRELGSTMAGNMWGNLYPRSGFVTQVDDDKAASVVAQRVADIITRTGQP  236
            ES+YPEAL+PG RE+GST A N+WGNLYPRSGFVTQ DD K++++VAQRVADIITRT Q 
Sbjct  181  ESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQI  240

Query  237  HVYQPLAGQRRDGYWPPSPVTENTGTKNHQWQRLSPQLSQSCAVFPD  283
            HVY+PL+G+   GYWPP PV ENTGT+NH+WQ+LSP LS SC+VFPD
Sbjct  241  HVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPD  287

38) EAM_2855 in NC_013971


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  312 bits (1169),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 190/295 (65%), Positives = 249/295 (85%), Gaps = 3/295 (1%)

Query  7    RPRRVALATIMACSG--TVASVNTAGLLASAASPDCISWRVSGICYWLMCTPSGCSVKTS  64
            R +R  L+ ++  +G    A++NTA+++AS+ SP CISWR+SGICYWLMCTP GC+VKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  65   VKVTHFIPQAVVSAWLSPGENPWTEMSALSATADGAESVLPggaagvatgggRQEMKAPG  124
            +KV HFIP+AVVS+  ++G NPWTEMS +S TA+G E+ + G+ +G+A+GGG QE K PG
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  125  MRSQNLHFYYAGAYGHPAAKIIGGRVAGYSCNSAATPFIPYSVSALDALAWRTGVPESVY  184
             R  N++F YA+A GHP++ IIGG+++GYSCNSAATP++PY +S+LD+LAWRTGVPESVY
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  185  PEALIPGQREVGSTPSGTMWGNVYPRSGFVTQTDGYKSAAVVVQRVADIITRQGQLHVYN  244
            PEALIPG+RE+GST++  +WGN+YPRSGFVTQ D+YKS+A+V QRVADIITR  Q+HVY+
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  245  PLVGQRSAGYWPPEAVSENSGSKNHKWQRLSPQLSQSCAVFPDVGGQIAQNGNYA  299
            PL G+ SAGYWPPE+V EN+G++NHKWQ+LSP LS SC+VFPD  G+IA+NGNYA
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNYA  298

39) EAMY_0571 in NC_013961


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  312 bits (1169),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 190/295 (65%), Positives = 249/295 (85%), Gaps = 3/295 (1%)

Query  7    RPRRVALATIMACSG--TVASVNTAGLLASAASPDCISWRVSGICYWLMCTPSGCSVKTS  64
            R +R  L+ ++  +G    A++NTA+++AS+ SP CISWR+SGICYWLMCTP GC+VKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  65   VKVTHFIPQAVVSAWLSPGENPWTEMSALSATADGAESVLPggaagvatgggRQEMKAPG  124
            +KV HFIP+AVVS+  ++G NPWTEMS +S TA+G E+ + G+ +G+A+GGG QE K PG
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  125  MRSQNLHFYYAGAYGHPAAKIIGGRVAGYSCNSAATPFIPYSVSALDALAWRTGVPESVY  184
             R  N++F YA+A GHP++ IIGG+++GYSCNSAATP++PY +S+LD+LAWRTGVPESVY
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  185  PEALIPGQREVGSTPSGTMWGNVYPRSGFVTQTDGYKSAAVVVQRVADIITRQGQLHVYN  244
            PEALIPG+RE+GST++  +WGN+YPRSGFVTQ D+YKS+A+V QRVADIITR  Q+HVY+
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  245  PLVGQRSAGYWPPEAVSENSGSKNHKWQRLSPQLSQSCAVFPDVGGQIAQNGNYA  299
            PL G+ SAGYWPPE+V EN+G++NHKWQ+LSP LS SC+VFPD  G+IA+NGNYA
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-GKIAENGNYA  298

40) LF82_692 in NC_011993


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  302 bits (1131),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 187/329 (57%), Positives = 258/329 (79%), Gaps = 20/329 (6%)

Query  1    MKQLRRHRLAIALAFGCAAQPFAAGAINSAQIIASAFSPQCLEYKIVGICYWLLCTPVGC  60
            MK LR  R  +++ +  ++     +A+N+A I+AS++SP C+  +I GICYWL+CTP GC
Sbjct  1    MKSLRLKRALLSVMLITGGME-VQAALNTASIVASSISPSCISWRISGICYWLMCTPFGC  59

Query  61   VVKTSTKVRHYIPNAVVSSYNQTGSNPWTEMSFLG-----------TGLSGIAEGGGANE  109
             VKTS KV+H+IP+AVVS+Y+ +G+NPWTEMS+++            +LSG+A GGG +E
Sbjct  60   TVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQE  119

Query  110  QK-RTERKDNLQFKNADVIGHPALAAPVFNKFMGQM-GYTCSGPATAMMPYLLSTLDAVM  167
            QK    RK N++FK AD IGHP+ +      + GQ+ GY+C+++AT+++PY+LSTLD++ 
Sbjct  120  QKFPGTRKSNVRFKYADAIGHPSTSI-----IGGQIPGYSCNSAATPLVPYFLSTLDTLA  174

Query  168  WRFGLPESFYPEAMTPGLREVGSTMGANMWGNVYPRSGFVTQVDDYKaaavvaqraadvv  227
            WR G+PES YPEA+ PG RE+GST + N+WGN+YPRSGFVTQ DDYK++A+VAQR AD++
Sbjct  175  WRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADII  234

Query  228  TRTGQIHVYQPMTARASPGYWPPSAVTENTGTRNHKWQLLTPSLSTSCAVFPDSPNPIAT  287
            TRT QIHVY+P+T+ +S+GYWPP +V ENTGT+NHKWQ L+P+LS SC+VFPD+ + IA 
Sbjct  235  TRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGK-IAE  293

Query  288  DGNYAWALWQPYSCCKRRGQTFLYSVDFQ  316
            +GNYAW+LWQPYSCCKRRGQTFLYS D++
Sbjct  294  NGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

41) NRG857_20930 in NC_017634


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  302 bits (1131),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 187/329 (57%), Positives = 258/329 (79%), Gaps = 20/329 (6%)

Query  1    MKQLRRHRLAIALAFGCAAQPFAAGAINSAQIIASAFSPQCLEYKIVGICYWLLCTPVGC  60
            MK LR  R  +++ +  ++     +A+N+A I+AS++SP C+  +I GICYWL+CTP GC
Sbjct  1    MKSLRLKRALLSVMLITGGME-VQAALNTASIVASSISPSCISWRISGICYWLMCTPFGC  59

Query  61   VVKTSTKVRHYIPNAVVSSYNQTGSNPWTEMSFLG-----------TGLSGIAEGGGANE  109
             VKTS KV+H+IP+AVVS+Y+ +G+NPWTEMS+++            +LSG+A GGG +E
Sbjct  60   TVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQE  119

Query  110  QK-RTERKDNLQFKNADVIGHPALAAPVFNKFMGQM-GYTCSGPATAMMPYLLSTLDAVM  167
            QK    RK N++FK AD IGHP+ +      + GQ+ GY+C+++AT+++PY+LSTLD++ 
Sbjct  120  QKFPGTRKSNVRFKYADAIGHPSTSI-----IGGQIPGYSCNSAATPLVPYFLSTLDTLA  174

Query  168  WRFGLPESFYPEAMTPGLREVGSTMGANMWGNVYPRSGFVTQVDDYKaaavvaqraadvv  227
            WR G+PES YPEA+ PG RE+GST + N+WGN+YPRSGFVTQ DDYK++A+VAQR AD++
Sbjct  175  WRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADII  234

Query  228  TRTGQIHVYQPMTARASPGYWPPSAVTENTGTRNHKWQLLTPSLSTSCAVFPDSPNPIAT  287
            TRT QIHVY+P+T+ +S+GYWPP +V ENTGT+NHKWQ L+P+LS SC+VFPD+ + IA 
Sbjct  235  TRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGK-IAE  293

Query  288  DGNYAWALWQPYSCCKRRGQTFLYSVDFQ  316
            +GNYAW+LWQPYSCCKRRGQTFLYS D++
Sbjct  294  NGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

42) G655_23755 in NC_020912


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  294 bits (1100),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 156/326 (48%), Positives = 238/326 (74%), Gaps = 18/326 (5%)

Query  1    MTSLNLRRLAAAVATFSLSFTASATINSAAIVSSTLSPQCLEYKVVGICYWLLCGPHGCK  60
            M SL L+R   +V  ++ +    A++N+A+IV+S++SP C+  ++ GICYWL+C P GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVRHYVPDAVVSSYANTGSNPWTEVSAL------------GTPNPLAQAGNDATT  108
            VKTS+KV+H++P+AVVS+Y  +G+NPWTE+S +            G+ + LA +G +   
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  109  NYKAE-NSIGRFKEADVIGHPGGATFSRFASASGYVCPGATFPLVPYFLSTLDAIGWRHG  167
            ++ +  +S  RFK AD IGHP+ + ++  +  +GY C +A+ PLVPYFLSTLD+++WR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  168  IPEQVYPEALVPGLREVGGIFSGDMWGNLYPRSGFLHQTDDYKTAAVIAQRAGDITTRIG  227
            +PE VYPEAL+PG RE+G+  + ++WGNLYPRSGF+ Q DDYK++A++AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  228  QLHVYLPMRAAPKDGYWPAGELKEGDASTG-KWQELTPSLSLNCAVFPSSGPKTQAVDGD  286
            Q+HVY P+ + P  GYWP+  +KE  ++   KWQ+L+P+LS++C+VFP +G  ++  +G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  287  YAWALWRPYSCCQRKGQIFLGSTDFQ  312
            YAW+LW+PYSCC+R+GQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

43) Pfl01_3026 in NC_007492


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  293 bits (1097),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 164/321 (52%), Positives = 228/321 (72%), Gaps = 21/321 (6%)

Query  12   KLRPLALSVLLMCGP---SMALDTASITSSVLSPNCLEYRVVGICFWLLCTPFGCKVKTS  68
            +L+   LSV+L+ G      AL+TASI +S +SP+C+  R+ GIC+WL+CTPFGC VKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  69   TKVRHFIPELVVSSYATTGSNPWGEMATLSFPINGAD------------GGGNLIT--PN  114
             KV+HFIPE VVS+Y ++G+NPW EM+ +S    G +            GGGN     P 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  115  TRRDNLPRFKNVDGIGHPGGWIATELASQSGYACASGATAFMPYYLSTLDSLAWRHGIPE  174
            TR+ N+ RFK  D+IGHP+  I    +  +GY+C S+AT+++PY+LSTLD+LAWR G+PE
Sbjct  125  TRKSNV-RFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPE  181

Query  175  SLYPESLMPGIREIGRQASGSMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPH  234
            S+YPE+L+PG REIG  ++ ++WGN+YPR GF+ Q DD+K++A++AQR +D+ITR  Q H
Sbjct  182  SVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIH  241

Query  235  AYVPLTPTPRDGYWPPGPIVENDAS-THKWQLLSPQILSTCTIFPSDPVPSADGGYAWSL  293
             Y PLT  P  GYWPP P+ EN ++  HKWQ LSP +  +C++FP     + +G YAW+L
Sbjct  242  VYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTL  301

Query  294  WRPYSCCKREGQTFLFSIDFE  314
            W+PYSCCKR GQTFL+S D++
Sbjct  302  WQPYSCCKRRGQTFLYSTDIN  322

44) Dd1591_0431 in NC_012912


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  289 bits (1083),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 156/323 (49%), Positives = 241/323 (75%), Gaps = 19/323 (5%)

Query  1    MRLPRCLHASILLTAA-SSSFALNTVAIISSSLSPDCLEYRVTGICYWLLCTPFGCSVRT  59
            +RL R L + +L+T++     ALNT +I++SS+SP C+  R++GICYWL+CTPFGC+V+T
Sbjct  4    LRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKT  63

Query  60   SVKVRHYVPDAVVSSYGNTGKNPWIEVRAMSMPNTTAQDGGDGT------SNHSNEDNLS  113
            S+KV+H++P+AVVS+Y  +G NPW E+  +S      +++  G+      +  ++E++++
Sbjct  64   SIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFP  123

Query  114  -------RFRNADVIGHPGGQAFSQFASSSGYICDGAGIAFMPYLLSTLDTVAWRYNIPE  166
                   RF+ AD IGHP+   ++  +  +GY C++A+ +++PY+LSTLDT+AWR  +PE
Sbjct  124  GTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPE  181

Query  167  VVYPEALIPGMREIGARATLNLWGSLYPRGGFLHQVDSYKASAVVAQRAGDIVTRRGQLH  226
             VYPEALIPG REIG+ ++ N+WG+LYPR+GF+ Q D YK++A+VAQR +DI+TR  Q+H
Sbjct  182  SVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIH  241

Query  227  VYQPLLANAHDGYWPAGALMENDASTG-KWQELAPDLSSSCTVFPHNGPLTQAQQDDYAW  285
            VY+PL +N+  GYWP+ ++ EN ++   KWQ+L+P LS SC+VFP+ G +  A++++YAW
Sbjct  242  VYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAW  299

Query  286  ALWRPYSCCQRRGQTFLGSMDFN  308
            +LW+PYSCC+RRGQTFL S D+N
Sbjct  300  TLWQPYSCCKRRGQTFLYSTDIN  322

45) W5S_1486 in NC_017845


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  288 bits (1079),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 155/326 (48%), Positives = 240/326 (74%), Gaps = 20/326 (6%)

Query  2    KRSHRLRTSIATVLLTAASSSF--ALNTATIVASSLSPDCLEYRVTGICYWLLCTKFGCS  59
             +S RL+ ++ +V+L +++     ALNTA+IVASS+SP C+  R++GICYWL+CT FGC+
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  60   VRTSVKVRHYVPDAVVSSYGNTGDNPWVEVRAMSMPNTTAQ----------SGGDGTSNH  109
            V+TS+KV+H++P+AVVS+Y  +G+NPW E+  +S      +          ++G+G  ++
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  110  ---GNENNLSSFRNADVIGHPGGQAFSQFASSSGYICDGTGTAFMPYLLSTLDTIAWRYN  166
               G  ++   F+ AD IGHP+   ++  +  +GY C++++T+++PY+LSTLDT+AWR  
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  167  IPEAVYPEALIPGMREIGARTTLNLWGNVYPRGGFLHQVDSYKASAVVAQRAGDIVTRRG  226
            +PE+VYPEALIPG REIG+ ++ N+WGN+YPR+GF+ Q D YK++A+VAQR +DI+TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  227  QLHVYHPLLANARDGYWPAGALMESDASTG-KWQELAPRLSASCAVFPHKEPLVQAQQGD  285
            Q+HVY PL +N+  GYWP+ ++ E+ ++   KWQ+L+P LS SC+VFP+   +  A++G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGN  296

Query  286  YVWALWRPYSCCQRRGQTFLGSVDFN  311
            Y W+LW+PYSCC+RRGQTFL S D+N
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

46) Psyr_1429 in NC_007005


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  287 bits (1075),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 158/326 (49%), Positives = 241/326 (74%), Gaps = 19/326 (5%)

Query  1    MNLRKPRAWAALALSISTWPAAAGTVTSATLVASTLSPDCLEYKVVGICYWLLCTPFGCK  60
             +LR  RA  ++ L  +      +++ +A++VAS++SP C+  ++ GICYWL+CTPFGC 
Sbjct  2    KSLRLKRALLSVMLITGG-MEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSTKVRHFVPDAVVSSYSNTGENPWIEVSSLSSSTSFAQDG----------GDGTTNH  110
            VKTS KV+HF+P+AVVS+Y  +G NPW E+S +S +++  +++          G+G  ++
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  111  ---SNEDSLAKFKNADVIGHPGGATFSKFASASGYACQGAATPYMPYLLSTLDTVAWRYG  167
               +   S  +FK AD IGHP+ + ++  +  +GY+C++AATP +PY+LSTLDT+AWR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  168  VPESVYPEALIPGRREVGGLTSGDMWGSVYPRSGFIHQADDYKAASVIAQRAGDVVTRSG  227
            VPESVYPEALIPGRRE+G+ ++ ++WG++YPRSGF+ Q DDYK+++++AQR +D++TR+ 
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  228  QVHVYQPLLAQPQPGYWPAGELIETDATTG-KWQELTPTLSQSCAVFPNSQPRVQATDGG  286
            Q+HVY+PL ++P +GYWP+  + E  +T   KWQ+L+PTLS SC+VFP++    +  +G 
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  287  YAWALWRPYSCCKREGQTFLGSTDFQ  312
            YAW+LW+PYSCCKR GQTFL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

47) PFLU1923 in NC_012660


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 160/321 (50%), Positives = 225/321 (71%), Gaps = 21/321 (6%)

Query  12   KLRPLALSILLACGP---SMALDTASITSSVLSPNCLEYRVVGICFWLLCTPFGCKVKTS  68
            +L+   LS++L  G      AL+TASI +S +SP+C+  R+ GIC+WL+CTPFGC VKTS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  69   TKVRHFIPELVVSSYATTGNNPWAEMATLSPPISGAE------------GGGNLIT--PN  114
             KV+HFIPE VVS+Y ++G NPW+EM+ +S   +G E            GGGN     P 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  115  THRANLPRFKNVDGIGHPGGWIATQLASQSGYACASGATAFMPYYLSTLDSLAWRHGIPE  174
            T+++N+ RFK  D+IGHP+  I    +  +GY+C S+AT+++PY+LSTLD+LAWR G+PE
Sbjct  125  TRKSNV-RFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPE  181

Query  175  NFYPESLMPGIREIGRQASGNMWGNIYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPH  234
            + YPE+L+PG REIG  ++ N+WGN+YPR GF+ Q DD+K++A++AQR +D+ITR  Q H
Sbjct  182  SVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIH  241

Query  235  VYLPLMPAKHDGYWPPGPIVENDAS-THKWQLLYPQVQPTCAIFPSDPVQSTDGGYAWSL  293
            VY PL      GYWPP P+ EN ++  HKWQ L P +  +C++FP     + +G YAW+L
Sbjct  242  VYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTL  301

Query  294  WRRYSCCKREGQTFLFSIDFE  314
            W+ YSCCKR GQTFL+S D++
Sbjct  302  WQPYSCCKRRGQTFLYSTDIN  322

48) Bpet1375 in NC_010170


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  285 bits (1067),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 152/296 (52%), Positives = 223/296 (76%), Gaps = 18/296 (6%)

Query  24   ALNTATITTSALSPDCLEYRVVGICYWLFCTTFGCSVRTSVKVRHYVPDAVVSSYATTGE  83
            ALNTA+I +S++SP C+  R+ GICYWL CT FGC+V+TS+KV+H++P+AVVS+Y ++G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  84   NPWLEVRAMSMPNTTAQAG--------GDGTTNQDHE-----NNLSKFKNADVIGHPGGA  130
            NPW E+  +S      + +        + G  NQ++      ++  +FK AD IGHP+ +
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  131  VLGQLASASGYSCEGAGTAFMPYLLSTLDTVAWRYNVPEAVYPEALIPGIREIGARTSLN  190
            ++G  +  +GYSC++A+T+++PY+LSTLDT+AWR  VPE+VYPEALIPG REIG+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  191  LWGAVYPRGGFLHQTDDYKSGAVVAQRAGDIVTRRGQIHVYQPLLATARDGYWPAGELVE  250
            +WG +YPR+GF+ Q DDYKSGA+VAQR +DI+TR  QIHVY+PL + +  GYWP+  + E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  251  GDASTG-KWQELTPTMSSSCAVFPHSNQRVQAQQGDYAWALWRPYSCCQRRGQTFL  305
              ++   KWQ+L+PT+S SC+VFP++ +   A++G+YAW+LW+PYSCC+RRGQTFL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGK--IAENGNYAWTLWQPYSCCKRRGQTFL  316

49) PSF113_3300 in NC_016830


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  284 bits (1063),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 159/301 (53%), Positives = 217/301 (73%), Gaps = 18/301 (5%)

Query  2    ALDTVSITSSVLSPNCLEYRVVGICFWLLCTPFGCTVKTSTKVRHFIPELVVSSYAATGN  61
            AL+T SI +S +SP+C+  R+ GIC+WL+CTPFGCTVKTS KV+HFIPE VVS+Y A+G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  62   NPWTEMATLSSPISGAE------------GGGNLIT--PNTRRDNLPRFKNVDGIGHPGG  107
            NPWTEM+ +S   +G E            GGGN     P TR+ N+ RFK  D+IGHP+ 
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNV-RFKYADAIGHPST  143

Query  108  WVATQLASQSGYACATGATAFMPYYLSTLDSLAWRHGIPESFYPESLMPGIREIGRQASG  167
             +    +  +GY+C ++AT+++PY+LSTLD+LAWR G+PES YPE+L+PG REIG  ++ 
Sbjct  144  SIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQ  201

Query  168  NMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNWQPHVYLPLTPAKRDGYWPPGPIV  227
            N+WGN+YPR GF+ Q DD+K++A++AQR +D+ITR  Q HVY PLT     GYWPP P+ 
Sbjct  202  NIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVK  261

Query  228  ENDAS-THKWQLLYPQVQPTCAIFPSDPLQSADGGYAWSLWRPYSCCKREGQTFLFSIDF  286
            EN ++  HKWQ L P +  +C++FP     + +G YAW+LW+PYSCCKR GQTFL+S D+
Sbjct  262  ENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

Query  287  E  287
            +
Sbjct  322  N  322

50) ebA2511 in NC_006513


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  284 bits (1064),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 151/296 (52%), Positives = 224/296 (76%), Gaps = 18/296 (6%)

Query  27   ALDTATIVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGE  86
            AL+TA+IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  87   NPWLEVRAMSMPNPTAKAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAGM  133
            NPW E+  +S        +        + G  N+++      ++  +FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  134  VFSQFASASGYTCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREIGTRTGLN  193
            +++  +  +GY+C++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREIG+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  194  LWGNVYPRGGFLHQTDDYKSGAVVAQRAGDIVTRRGQIHVYQPLLANARDGYWPAGALME  253
            +WGN+YPR+GF+ Q DDYKSGA+VAQR +DI+TR  QIHVY+PL +N+  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  254  TDASTG-KWQELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFL  308
              ++   KWQ+L+PTLS SC VFP++  ++ A++G+YAW+LW+PYSCC+RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

51) Pecwa_1621 in NC_013421


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  284 bits (1062),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 159/322 (50%), Positives = 240/322 (75%), Gaps = 20/322 (6%)

Query  6    RLRVSLATVLLTAASSSF--ALNTAAIISSSLSPDCLEYRVTGICYWLLCTKFGCTVRTS  63
            RL+ +L +V+L +++     ALNTA+I++SS+SP C+  R++GICYWL+CT FGCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  64   VKVRHYVPDAVVSSYANTGENPWLEVRAMSQTNT----------TARSGGDGTSNH---G  110
            +KV+H++P+AVVS+Y  +G NPW E+  +SQT            ++ ++G+G  ++   G
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  111  NENNLSSFRNADVIGHPGGQVFNQFAASSGTICDGAGTAFMPYLLSTLDTIAWRYNIPES  170
              ++   F+ AD IGHP+  ++   +  +G  C++A+T+++PY+LSTLDT+AWR  +PES
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  171  VYPEALIPGMREIGARTALNLWGNVYPRGGFLHQVDSYKASAVVAQRAGDIVTRRGQLHV  230
            VYPEALIPG REIG+ +A N+WGN+YPR+GF+ Q D YK++A+VAQR +DI+TR  Q+HV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  231  YQPLLANARDGYWPAGALMESDAATG-KWQELAPRSSSSCTVFPHNGTHTQAQQDNYAWA  289
            Y+PL +N+  GYWP+ ++ E+ ++   KWQ+L+P  S SC+VFP+ G    A+++NYAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  290  LWRPYSCCQRRGQTFLGSVDFN  311
            LW+PYSCC+RRGQTFL S D+N
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

52) L483_22295 in NC_021491


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  283 bits (1058),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 156/303 (52%), Positives = 216/303 (72%), Gaps = 20/303 (6%)

Query  9    ALTTPAIIASVASLQCLEYRIVGICYWLLCTPFGCTVRTSPKVRHFIPELVVSSYSNTGS  68
            AL T++I+AS  S  C+  RI GICYWL+CTPFGCTV+TS KV+HFIPE VVS+Y  +G+
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  69   NPWGEMSALSVP------------TPLSQGGGNLIT--PSSQRDNLPRFKNVDGIGHPGG  114
            NPW EMS +S              + L+ GGGN     P++++ N+ RFK  D+IGHP+ 
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNV-RFKYADAIGHPST  143

Query  115  AALTALAQSFGFGYACPSGAVPLAPYYLSTLDPLAWRHAIPESVYPQALTPGMREIGSQA  174
            + + +       GY+C S+A PL PY+LSTLD LAWR ++PESVYP+AL PG REIGS +
Sbjct  144  SIIGGQIP----GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTS  199

Query  175  FGNMWGSVYPRQGFLVQPDDFKAAAVMAQRASDFITRVGQPHVYLPLQPMPAPGYWPPQP  234
              N+WG++YPR GF+ Q DD+K++A++AQR +D+ITR  Q HVY PL   P++GYWPP+P
Sbjct  200  AQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEP  259

Query  235  VMENN-INNHRWQLLTPMVQSTCAIFPSATLQSAEGAYAWSLWRPYRCCQRMGQTFLFSI  293
            V EN   +NH+WQ L+P +  +C++FP +   + +G YAW+LW+PY CC+R GQTFL+S 
Sbjct  260  VKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYST  319

Query  294  DFD  296
            D++
Sbjct  320  DIN  322

53) A458_06400 in NC_018028


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  282 bits (1055),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 150/296 (51%), Positives = 224/296 (76%), Gaps = 18/296 (6%)

Query  27   ALDTATIVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGE  86
            AL+TA+IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  87   NPWLEVRAMSMPNPTAKAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAGV  133
            NPW E+  +S        +        + G  N+++      ++  +FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  134  VFSQFASASGYTCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREIGTRTGLD  193
            +++  +  +GY+C++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREIG+ ++ +
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  194  LWGNVYPRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLANARDGYWPAGALME  253
            +WGN+YPR+GF+ Q DD KSGA+VAQR +DI+TR NQIHVY+PL +N+  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  254  TDASTG-KWQELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFL  308
              ++   KWQ+L+PTLS SC VFP++  ++ A++G+YAW+LW+PYSCC+RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

54) Tola_2448 in NC_012691


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  281 bits (1052),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 157/302 (52%), Positives = 228/302 (76%), Gaps = 18/302 (5%)

Query  23   ALNTATIISSTLSPDCLEYRVTGICYWLYCTWTGCTVRTSIKVRHYVPDAVVSSYSNTGE  82
            ALNTA+I++S++SP C+  R++GICYWL CT  GCTV+TSIKV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  83   NPWVEARAMSQPNATAQAGGDGT------TNEDHENNLA-------KFKNADVIGHPGGE  129
            NPW E   +SQ  +  + +  G+         ++E++++       +FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  130  VFSQFASASGYICAGAGTAFMPYLLSTLDTLAWRYNVPEAVYPEALIPGMREIGTRSGLN  189
            +++  +  +GY C +A+T+++PY+LSTLDTLAWR  VPE+VYPEALIPG REIG+ S+ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  190  LWGAVYPRGGFLHQTDDYKAGAVVAQRAGDIVTRRGQLHVYQPLLANARDGYWPAGALIE  249
            +WG +YPR+GF+ Q DDYK+GA+VAQR +DI+TR  Q+HVY+PL +N+  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  250  SDASTG-KWQQLTPRLSNSCTVFPHAGSLPQAQRGDYAWALWRPYSCCQRRGQTFLGSVD  308
            + ++   KWQQL+P LS SC+VFP++G +  A+ G+YAW+LW+PYSCC+RRGQTFL S D
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

Query  309  FN  310
            +N
Sbjct  321  IN  322

55) YSA_00802 in NC_017986


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  281 bits (1051),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 156/324 (49%), Positives = 227/324 (71%), Gaps = 19/324 (5%)

Query  15   RTARHGRAFTTAALLVAAEQCLA-LTTPTLVASVTSLQCLEYRVVGICYWLLCTPFGCTV  73
            ++ R  RA+ +  L+ ++ +  A L T+++VAS  S  C+  R+ GICYWL+CTPFGCTV
Sbjct  2    KSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTV  61

Query  74   RTSPKIRHFIPELVVSSYADTGANPWSEMSTLSMPTPGSQ------------GGGNLIT-  120
            +TS K++HFIPE VVS+Y  +G+NPW+EMS +S  + G +            GGGN    
Sbjct  62   KTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQK  121

Query  121  -PSPQRDNLPRFKNVDGIGHPGGaaltalaltFGYACPSGAVPFAPYYLSTLDPLAWRQA  179
             P+ ++ N+ RFK  D+IGHP+ + + +     GY+C S+A P+ PY+LSTLD LAWR +
Sbjct  122  FPGTRKSNV-RFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  180  VPESVYPQARVPGMREIGNQALGDMWGNVYPRHGFLVQPDDFKAAAVMAQRASDFITRVG  239
            VPESVYP+A +PG REIG+ +  ++WGN+YPR GF+ Q DD+K++A++AQR +D+ITR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  240  QPHVYLPLQPMPAPGYWPPQPVMENN-LNNHRWQLLTPVIQNTCAIFPSPTIQSADGAYA  298
            Q HVY PL   P++GYWPP+PV EN   +NH+WQ L+P +  +C++FP     + +G YA
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYA  298

Query  299  WSLWRPYRCCQRMGQTFLFSIDFD  322
            W+LW+PY CC+R GQTFL+S D++
Sbjct  299  WTLWQPYSCCKRRGQTFLYSTDIN  322

56) XAC2283 in NC_003919


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  280 bits (1046),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 159/321 (50%), Positives = 239/321 (75%), Gaps = 21/321 (6%)

Query  1    MMGLRKLRGTVACVLLASTGPSF--ALNTASIVTAALSPDCLAYRIAGICYWLYCTSSGC  58
            M +LR L+ ++  V+L + G     ALNTASIV++++SP C++ RI+GICYWL CT+ GC
Sbjct  1    MKSLR-LKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGC  59

Query  59   TVRTSVKVRHYVPDAVVSSYSNTGANPWVEVRAMSTPNPTAQAG--------GDGTTNEE  110
            TV+TS+KV+H++P+AVVS+Y  +G+NPW E+  +S      + +        + G  N+E
Sbjct  60   TVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQE  119

Query  111  HE-----NNLAKFKNADVIGHPAGAVFSAFASRSGYTCEGAGTPFVPYLLSTFDTLAWRY  165
            +      ++  +FK AD IGHP+ +++++    +GY+C++A+TP+VPY+LST+DTLAWR 
Sbjct  120  QKFPGTRKSNVRFKYADAIGHPSTSIIGG--QIPGYSCNSAATPLVPYFLSTLDTLAWRT  177

Query  166  NVPEAAYPESLTPGVREIGSRLTANLWGNVYPRGGFLHQTHDYWSGAVVAQRAGDVVTRT  225
             VPE+ YPE+L PG REIGS  + N+WGN+YPR+GF+ Q +DY SGA+VAQR +D++TRT
Sbjct  178  GVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRT  237

Query  226  GQPHVYQPLLASSYAGYWPAGPLVE-SNPDSGKWQELTPTLSSRCAVFPHSGPFVQAQQG  284
             Q HVY+PL +++ AGYWP+ P+ E +  ++ KWQ+L+PTLS  C+VFP++G +  A++G
Sbjct  238  NQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENG  295

Query  285  DYAWALWRPYSCCQRRGQVFL  305
            +YAW+LW+PYSCC+RRGQ FL
Sbjct  296  NYAWTLWQPYSCCKRRGQTFL  316

57) XCAW_01946 in NC_020815


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  280 bits (1046),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 159/321 (50%), Positives = 239/321 (75%), Gaps = 21/321 (6%)

Query  1    MMGLRKLRGTVACVLLASTGPSF--ALNTASIVTAALSPDCLAYRIAGICYWLYCTSSGC  58
            M +LR L+ ++  V+L + G     ALNTASIV++++SP C++ RI+GICYWL CT+ GC
Sbjct  1    MKSLR-LKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGC  59

Query  59   TVRTSVKVRHYVPDAVVSSYSNTGANPWVEVRAMSTPNPTAQAG--------GDGTTNEE  110
            TV+TS+KV+H++P+AVVS+Y  +G+NPW E+  +S      + +        + G  N+E
Sbjct  60   TVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQE  119

Query  111  HE-----NNLAKFKNADVIGHPAGAVFSAFASRSGYTCEGAGTPFVPYLLSTFDTLAWRY  165
            +      ++  +FK AD IGHP+ +++++    +GY+C++A+TP+VPY+LST+DTLAWR 
Sbjct  120  QKFPGTRKSNVRFKYADAIGHPSTSIIGG--QIPGYSCNSAATPLVPYFLSTLDTLAWRT  177

Query  166  NVPEAAYPESLTPGVREIGSRLTANLWGNVYPRGGFLHQTHDYWSGAVVAQRAGDVVTRT  225
             VPE+ YPE+L PG REIGS  + N+WGN+YPR+GF+ Q +DY SGA+VAQR +D++TRT
Sbjct  178  GVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRT  237

Query  226  GQPHVYQPLLASSYAGYWPAGPLVE-SNPDSGKWQELTPTLSSRCAVFPHSGPFVQAQQG  284
             Q HVY+PL +++ AGYWP+ P+ E +  ++ KWQ+L+PTLS  C+VFP++G +  A++G
Sbjct  238  NQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENG  295

Query  285  DYAWALWRPYSCCQRRGQVFL  305
            +YAW+LW+PYSCC+RRGQ FL
Sbjct  296  NYAWTLWQPYSCCKRRGQTFL  316

58) Tmz1t_0944 in NC_011662


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  279 bits (1045),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 150/290 (52%), Positives = 220/290 (76%), Gaps = 18/290 (6%)

Query  33   IVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGENPWLEV  92
            IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G NPW E+
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  93   RAMSMPNPTAKAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAGMVFSQFA  139
              +S        +        + G  N+++      ++  +FK AD IGHP+  +++  +
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--G  148

Query  140  RASGYTCEGAGTAFVPYLLSTLDTLAWRYNVPEALYPEALIPGRREIGTRTGLNLWGNVY  199
            + +GY+C++A+T++VPY+LSTLDTLAWR  VPE++YPEALIPGRREIG+ ++ N+WGN+Y
Sbjct  149  QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLY  208

Query  200  PRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLANARDGYWPAGALMETDASTG  259
            PR+GF+ Q DD KSGA+VAQR +DI+TR NQIHVY+PL +N+  GYWP+ ++ E  ++  
Sbjct  209  PRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQN  268

Query  260  -KWQELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFL  308
             KWQ+L+PTLS SC VFP++  ++ A++G+YAW+LW+PYSCC+RRGQ FL
Sbjct  269  HKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

59) PA14_59990 in NC_008463


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  279 bits (1045),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 156/326 (48%), Positives = 238/326 (74%), Gaps = 18/326 (5%)

Query  1    MTSLNLRRlaaaaatfslsftasaainsaaivsstLSPQCLEYKVVGICYWLLCGPHGCK  60
            M SL L+R   +   ++ +    AA+N+A+IV+S++SP C+  ++ GICYWL+C P GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVRHYVPDAVVSSYANTGSNPWTEVSAL------------GTPNPLAQAGNDATT  108
            VKTS+KV+H++P+AVVS+Y  +G+NPWTE+S +            G+ + LA +G +   
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  109  NYKAE-NSIGRFKEADVIGHPGGATFSRFASASGYVCPGATVPLVPYFLSTLDAIGWRHG  167
            ++ +  +S  RFK AD IGHP+ + ++  +  +GY C +A+ PLVPYFLSTLD+++WR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  168  IPEQVYPEALVPGLREVGGIFSGDMWGNLYPRSGFLHQTDDYKTAAVIAQRAGDITTRIG  227
            +PE VYPEAL+PG RE+G+  + ++WGNLYPRSGF+ Q DDYK++A++AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  228  QLHVYLPMRAAPKDGYWPAGELKEGDASTG-KWQELTPSLSLNCAVFPNSGPKTQAVDGD  286
            Q+HVY P+ + P  GYWP+  +KE  ++   KWQ+L+P+LS++C+VFP++G  ++  +G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  287  YAWALWRPYSCCQRKGQIFLGSTDFQ  312
            YAW+LW+PYSCC+R+GQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

60) DSC_04055 in NC_016147


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 153/301 (51%), Positives = 228/301 (76%), Gaps = 18/301 (5%)

Query  25   INTGTIVASTLSPDCLEYRVVGICYWLYCTWTGCTVRTSVKVRHYVPDAVVSSYSNTGEN  84
            +NT++IVAS++SP C+  R+ GICYWL CT  GCTV+TS+KV+H++P+AVVS+Y  +G N
Sbjct  26   LNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGN  85

Query  85   PWTEVRFMSPPNPTAEDG--------GDGTTNHDNE-----NNLAKFKNADVIGHPGGQV  131
            PWTE+ ++S      E++        + G  N+++      ++  +FK AD IGHP+  +
Sbjct  86   PWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSI  145

Query  132  FSQFASASGYACEGAGTAFMPYLLSTLDTLAWRYNVPEMVYPESLIPGRREVGTRTGLNL  191
            ++  +  +GY+C++A+T+++PY+LSTLDTLAWR  VPE VYPE+LIPGRRE+G+ ++ N+
Sbjct  146  IG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNI  203

Query  192  WGNVYPRGGFLHQTDDYKSSAVVAQRAGDIVTRRGQIHVYQSLLAEARDGYWPAGELMES  251
            WGN+YPR+GF+ Q DDYKS+A+VAQR +DI+TR  QIHVY++L +++  GYWP+  + E+
Sbjct  204  WGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKEN  263

Query  252  DASTG-KWQELTPTLSNSCAVFPHTNTRVQAQQGDYAWALWRPYSCCERRGQVFLGSTDF  310
             ++   KWQ+L+PTLS SC+VFP+T     A++G+YAW+LW+PYSCC RRGQ FL STD+
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPDTGK--IAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

Query  311  D  311
            +
Sbjct  322  N  322

61) PADK2_24070 in NC_018080


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 156/326 (48%), Positives = 238/326 (74%), Gaps = 18/326 (5%)

Query  1    MTSLNLRRlaaaaatfslsftaaaainsaaivssTLSPQCLEYKVVGICYWLLCGPHGCK  60
            M SL L+R   +   ++ +    AA+N+A+IV+S++SP C+  ++ GICYWL+C P GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVRHYVPDAVVSSYANTGSNPWTEVSAL------------GTPNPLAQAGNDATT  108
            VKTS+KV+H++P+AVVS+Y  +G+NPWTE+S +            G+ + LA +G +   
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  109  NYKAE-NSIGRFKEADVIGHPGGATFSRFASASGYVCPGATFPLVPYFLSTLDAIGWRHG  167
            ++ +  +S  RFK AD IGHP+ + ++  +  +GY C +A+ PLVPYFLSTLD+++WR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  168  IPEQVYPEALVPGLREVGGIFSGDMWGNLYPRSGFLHQTDDYKTAAVIAQRAGDITTRIG  227
            +PE VYPEAL+PG RE+G+  + ++WGNLYPRSGF+ Q DDYK++A++AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  228  QLHVYLPMRAAPKDGYWPAGELKEGDASTG-KWQELTPSLSLNCAVFPNSGPKTQAVDGD  286
            Q+HVY P+ + P  GYWP+  +KE  ++   KWQ+L+P+LS++C+VFP++G  ++  +G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  287  YAWALWRPYSCCQRKGQIFLGSTDFQ  312
            YAW+LW+PYSCC+R+GQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

62) XAC29_11575 in NC_020800


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 156/316 (50%), Positives = 236/316 (75%), Gaps = 20/316 (6%)

Query  5    KLRGTVACVLLASTGPSF--ALNTASIVTAALSPDCLAYRIAGICYWLYCTSSGCTVRTS  62
            +L+ ++  V+L + G     ALNTASIV++++SP C++ RI+GICYWL CT+ GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  63   VKVRHYVPDAVVSSYSNTGANPWVEVRAMSTPNPTAQAG--------GDGTTNEEHE---  111
            +KV+H++P+AVVS+Y  +G+NPW E+  +S      + +        + G  N+E+    
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  112  --NNLAKFKNADVIGHPAGAVFSAFASRSGYTCEGAGTPFVPYLLSTFDTLAWRYNVPEA  169
              ++  +FK AD IGHP+ +++++    +GY+C++A+TP+VPY+LST+DTLAWR  VPE+
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGG--QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  170  AYPESLTPGVREIGSRLTANLWGNVYPRGGFLHQTHDYWSGAVVAQRAGDVVTRTGQPHV  229
             YPE+L PG REIGS  + N+WGN+YPR+GF+ Q +DY SGA+VAQR +D++TRT Q HV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  230  YQPLLASSYAGYWPAGPLVE-SNPDSGKWQELTPTLSSRCAVFPHSGPFVQAQQGDYAWA  288
            Y+PL +++ AGYWP+ P+ E +  ++ KWQ+L+PTLS  C+VFP++G +  A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWT  300

Query  289  LWRPYSCCQRRGQVFL  304
            LW+PYSCC+RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

63) Bpet4261 in NC_010170


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  278 bits (1040),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 157/322 (49%), Positives = 234/322 (73%), Gaps = 20/322 (6%)

Query  10   RLRAGVVSVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ +++SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAVVSSYSNTGENPWVEVRAMSAPNPSAQAGGDGT------TNEDHENNLA-  120
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGRREVGARTTMNLWGNVYPRGGFLHQADDHKAGAVVAQRAGDVVTRRGQIHV  234
             YPEALIPGRRE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRPGYWPAGALMEGDASTG-KWQELTPVLSSSCTVFPRSGFLTQAQQGDYAWA  293
            Y+PL +N+ +GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP +G    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERRGQVFLGSVDFQ  315
            LW+PY+CC RRGQ FL S D++
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

64) Daci_4183 in NC_010002


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  278 bits (1040),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 157/322 (49%), Positives = 234/322 (73%), Gaps = 20/322 (6%)

Query  10   RLRAGVVSVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ +++SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAVVSSYSNTGENPWVEVRAMSAPNPSAQAGGDGT------TNEDHENNLA-  120
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGRREVGARTTMNLWGNVYPRGGFLHQADDHKAGAVVAQRAGDVVTRRGQIHV  234
             YPEALIPGRRE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRPGYWPAGALMEGDASTG-KWQELTPVLSSSCTVFPRSGFLTQAQQGDYAWA  293
            Y+PL +N+ +GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP +G    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERRGQVFLGSVDFQ  315
            LW+PY+CC RRGQ FL S D++
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

65) PLES_26491 in NC_011770


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  278 bits (1040),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 154/316 (49%), Positives = 229/316 (73%), Gaps = 20/316 (6%)

Query  10   RLRAGVASLLLLSAT--GSYALNTATIIGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ ++ S++L+++      ALNTA+I++S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAVVSSYSNTGENPWVEVQAMSTPNPSAQAG--------GDGTTNEDHE---  116
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +        + G  N+++    
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  117  --NSLAKFKNADVIGHPGAEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
              +S  +FK AD IGHP++ ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGRREVGARTTMNLWGNVYPRGGFLHQTDDFKAGAVVAQRAGDVVTRRGQIHV  234
             YPEALIPGRRE+G+ ++ N+WGN+YPR+GF+ Q DD+K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRDGYWPAGALMEGDASTG-KWQELTPVLSSSCTVFPRSGFLTQAQQGDYAWA  293
            Y+PL +N+  GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP +G    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERRGQVFL  309
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

66) NCGM2_1407 in NC_017549


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  278 bits (1040),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 157/322 (49%), Positives = 234/322 (73%), Gaps = 20/322 (6%)

Query  10   RLRAGVVSVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ +++SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAVVSSYSNTGENPWVEVRAMSAPNPSAQAGGDGT------TNEDHENNLA-  120
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGRREVGARTTMNLWGNVYPRGGFLHQADDHKAGAVVAQRAGDVVTRRGQIHV  234
             YPEALIPGRRE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRPGYWPAGALMEGDASTG-KWQELTPVLSSSCTVFPRSGFLTQAQQGDYAWA  293
            Y+PL +N+ +GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP +G    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERRGQVFLGSVDFQ  315
            LW+PY+CC RRGQ FL S D++
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

67) PputW619_3331 in NC_010501


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 147/300 (49%), Positives = 214/300 (72%), Gaps = 18/300 (6%)

Query  38   LTTPTLIASVGSLQCLEYRVVGICYWLLCTPFGCTVRISPKIRHFIPELVVSSYADTGAN  97
            L T++++AS  S  C+  R+ GICYWL+CTPFGCTV+ S K++HFIPE VVS+Y  +G+N
Sbjct  26   LNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGN  85

Query  98   PWSEMSGLSAPTPASQ------------GGGNLIT--PSPQRDNLPRFKNVDGIGHPGGA  143
            PW+EMS +S  + + +            GGGN     P+ ++ N+ RFK  D+IGHP+ +
Sbjct  86   PWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNV-RFKYADAIGHPSTS  144

Query  144  ALTAFAHTFGYACPSGAVPFAPYYLSTLDPLAWRQAVPESVYPQALVPGMREIGNQALGD  203
             + +  +  GY+C S+A P+ PY+LSTLD LAWR +VPESVYP+AL+PG REIG+ +  +
Sbjct  145  IIGG--QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  204  MWGSVYPRHGFLVQPDDFKAAAVMAQRASDFITRVGQPHVYLPLQPMSAPGYWPPQPVME  263
            +WG++YPR GF+ Q DD+K++A++AQR +D+ITR  Q HVY PL   +++GYWPP+PV E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  264  NN-VKNHRWQLLVPVIQNTCAIFPSPTIQSADGAYAWSLWRPYRCCQRMGQTFLFSIDFD  322
            N   +NH+WQ L P +  +C++FP     + +G YAW+LW+PY CC+R GQTFL+S D++
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

68) PSTAA_1245 in NC_017532


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  278 bits (1040),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 156/322 (49%), Positives = 234/322 (73%), Gaps = 20/322 (6%)

Query  10   RLRAGVVSVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ +++SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAVVSSYSNTGENPWVEVRAMSAPNPSAQAGGDGT------TNEDHENNLA-  120
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPDM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VP+ 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGRREVGARTTMNLWGNVYPRGGFLHQADDHKAGAVVAQRAGDVVTRRGQIHV  234
             YPEALIPGRRE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRPGYWPAGALMEGDASTG-KWQELTPVLSSSCTVFPRSGFLTQAQQGDYAWA  293
            Y+PL +N+ +GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP +G    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERRGQVFLGSVDFQ  315
            LW+PY+CC RRGQ FL S D++
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

69) Bpet1502 in NC_010170


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  277 bits (1035),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 154/316 (49%), Positives = 229/316 (73%), Gaps = 20/316 (6%)

Query  50   RLRAGVASVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  107
            RL+ ++ SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  108  IKVRHYIPDAVVSSYSNTGENPWIEVRPMSTPNPSAQAGGDGT------TNEDHENNLA-  160
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  161  ------KFKNADVIGHPGAEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  214
                  +FK AD IGHP++ ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  215  AYPEALIPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKTGAVIAQRAGDVVTRRGQLHV  274
             YPEALIPG RE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA++AQR +D++TR  Q+HV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  275  YQPLLANPRDGYWPAGALMEGDASTG-KWQELTPVLSSSCSVFPRSGSLTQAQQGDYAWA  333
            Y+PL +NP  GYWP+ ++ E  ++   KWQ+L+P LS SCSVFP +G +  A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWT  300

Query  334  LWRPYACCERRGQVFL  349
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

70) NCGM2_1802 in NC_017549


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  277 bits (1038),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 156/326 (48%), Positives = 239/326 (74%), Gaps = 18/326 (5%)

Query  1    MTSLNLRRlaaavatfslsftasaainsaaivsstLSPQCLEYKVVGICYWLLCGPHGCK  60
            M SL L+R   +V  ++ +    AA+N+A+IV+S++SP C+  ++ GICYWL+C P GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVRHYVPDAVVSSYANTGSNPWTEVSAL------------GTPNPLAQAGNDATT  108
            VKTS+KV+H++P+AVVS+Y  +G+NPWTE+S +            G+ + LA +G +   
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  109  NYKAE-NSIGRFKEADVIGHPGGATFSRFASASGYVCPGATFPLVPYFLSTLDAIGWRHG  167
            ++ +  +S  RFK AD IGHP+ + ++  +  +GY C +A+ PLVPYFLSTLD+++WR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  168  IPEQVYPEALVPGLREVGGIFSGDMWGNLYPRSGFLHQTDDYKTAAVIAQRAGDITTRIG  227
            +PE VYPEAL+PG RE+G+  + ++WGNLYPRSGF+ Q DDYK++A++AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  228  QLHVYLPMRAAPKDGYWPAGELREGDASTG-KWQELTPSLSLNCAVFPNSGPKTQAVDGD  286
            Q+HVY P+ + P  GYWP+  ++E  ++   KWQ+L+P+LS++C+VFP++G  ++  +G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  287  YAWALWRPYSCCQRKGQIFLGSTDFQ  312
            YAW+LW+PYSCC+R+GQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

71) AvCA6_36350 in NC_021150


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  277 bits (1035),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 157/326 (49%), Positives = 232/326 (72%), Gaps = 20/326 (6%)

Query  1    MKRSPLRPLALAIA-TTLPVGTSVALDTAAIVASTLSPDCLEYKVVGICYWLYCSA-GCR  58
            MK   L+   L++   T  +    AL+TA+IVAS++SP C+  ++ GICYWL C++ GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  59   VRTSTKVRHYIPDAVVSAYANTGDNPWSEVSALGA-------------PNVAAQAGNDGT  105
            V+TS KV+H+IP+AVVS+Y  +G+NPW+E+S ++              + +AA +GN+  
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  106  TNHGNENNLAKFKEADVIGHPGGAVFSRFASASGYACRGATSPLVPYLLSTLDSLAWRHG  165
               G  ++  +FK AD IGHP+ ++++  +  +GY+C +A++PLVPY+LSTLD+LAWR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  166  VPESVYPEALVPGMREVGGTLSGDLWGSVYPRSGFLHQTDDHKAGAVFAQRAGDITTRQG  225
            VPESVYPEAL+PG RE+G+T + ++WG++YPRSGF+ Q DD K+GA+ AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  226  QPHVYLPMLAHPQDGYWPAGELLEGN-ARTGKWQELTPRLSQSCAVFPNGGSHAQAADGA  284
            Q HVY P+ ++P  GYWP+  + E   ++  KWQ+L+P LS SC+VFP+ G  A+  +G 
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  285  YAWALWRPYACCQRRGQRFLGSTDVQ  310
            YAW+LW+PY+CC+RRGQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

72) AvCA_36350 in NC_021149


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  277 bits (1035),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 157/326 (49%), Positives = 232/326 (72%), Gaps = 20/326 (6%)

Query  1    MKRSPLRPLALAIA-TTLPVGTSVALDTAAIVASTLSPDCLEYKVVGICYWLYCSA-GCR  58
            MK   L+   L++   T  +    AL+TA+IVAS++SP C+  ++ GICYWL C++ GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  59   VRTSTKVRHYIPDAVVSAYANTGDNPWSEVSALGA-------------PNVAAQAGNDGT  105
            V+TS KV+H+IP+AVVS+Y  +G+NPW+E+S ++              + +AA +GN+  
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  106  TNHGNENNLAKFKEADVIGHPGGAVFSRFASASGYACRGATSPLVPYLLSTLDSLAWRHG  165
               G  ++  +FK AD IGHP+ ++++  +  +GY+C +A++PLVPY+LSTLD+LAWR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  166  VPESVYPEALVPGMREVGGTLSGDLWGSVYPRSGFLHQTDDHKAGAVFAQRAGDITTRQG  225
            VPESVYPEAL+PG RE+G+T + ++WG++YPRSGF+ Q DD K+GA+ AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  226  QPHVYLPMLAHPQDGYWPAGELLEGN-ARTGKWQELTPRLSQSCAVFPNGGSHAQAADGA  284
            Q HVY P+ ++P  GYWP+  + E   ++  KWQ+L+P LS SC+VFP+ G  A+  +G 
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  285  YAWALWRPYACCQRRGQRFLGSTDVQ  310
            YAW+LW+PY+CC+RRGQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

73) Avin_36350 in NC_012560


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  277 bits (1035),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 157/326 (49%), Positives = 232/326 (72%), Gaps = 20/326 (6%)

Query  1    MKRSPLRPLALAIA-TTLPVGTSVALDTAAIVASTLSPDCLEYKVVGICYWLYCSA-GCR  58
            MK   L+   L++   T  +    AL+TA+IVAS++SP C+  ++ GICYWL C++ GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  59   VRTSTKVRHYIPDAVVSAYANTGDNPWSEVSALGA-------------PNVAAQAGNDGT  105
            V+TS KV+H+IP+AVVS+Y  +G+NPW+E+S ++              + +AA +GN+  
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  106  TNHGNENNLAKFKEADVIGHPGGAVFSRFASASGYACRGATSPLVPYLLSTLDSLAWRHG  165
               G  ++  +FK AD IGHP+ ++++  +  +GY+C +A++PLVPY+LSTLD+LAWR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  166  VPESVYPEALVPGMREVGGTLSGDLWGSVYPRSGFLHQTDDHKAGAVFAQRAGDITTRQG  225
            VPESVYPEAL+PG RE+G+T + ++WG++YPRSGF+ Q DD K+GA+ AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  226  QPHVYLPMLAHPQDGYWPAGELLEGN-ARTGKWQELTPRLSQSCAVFPNGGSHAQAADGA  284
            Q HVY P+ ++P  GYWP+  + E   ++  KWQ+L+P LS SC+VFP+ G  A+  +G 
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  285  YAWALWRPYACCQRRGQRFLGSTDVQ  310
            YAW+LW+PY+CC+RRGQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

74) Rpic12D_0687 in NC_012856


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  277 bits (1035),  Expect = 8e-76, Method: Compositional matrix adjust.
 Identities = 153/303 (51%), Positives = 225/303 (75%), Gaps = 18/303 (5%)

Query  22   GGAASTFALNTATIVSSALSPDCLEYRVVGICYWLFCTWTGCTVRTSVKVRHYVPDAVVS  81
            GG     ALNTA+IV+S++SP C+  R+ GICYWL CT  GCTV+TS+KV+H++P+AVVS
Sbjct  18   GGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVS  77

Query  82   SYSNTGENPWIEVRAMSMPNPTAQAG--------GDGTTNHDNE-----NNLAKFKNADV  128
            +Y  +G NPW E+  +S      + +        + G  N+++      ++  +FK AD 
Sbjct  78   TYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADA  137

Query  129  IGHPGGSVFSQFASASGYACQGAGTAFMPYLLSTLDTLAWRYNVPEMVYPEALIPGMREI  188
            IGHP+ S+++  +  +GY+C++A+T+++PY+LSTLDTLAWR  VPE VYPEALIPG REI
Sbjct  138  IGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREI  195

Query  189  GGRTTLNLWGNVYPRGGFLHQTDDYKSGAVVAQRAGDVVTRRMQPHVYQPLLASSSDGYW  248
            G+ ++ N+WGN+YPR+GF+ Q DDYKSGA+VAQR +D++TR  Q HVY+PL +++S GYW
Sbjct  196  GSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYW  255

Query  249  PAGALMESDASTG-KWQELTPTLSNSCAVFPHSNTRVQAQQGDYAWALWRPYACCQRRGQ  307
            P+ ++ E+ ++   KWQ+L+PTLS SC+VFP++     A++G+YAW+LW+PY+CC+RRGQ
Sbjct  256  PPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGK--IAENGNYAWTLWQPYSCCKRRGQ  313

Query  308  VFL  310
             FL
Sbjct  314  TFL  316

75) PSPA7_4520 in NC_009656


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  276 bits (1033),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 144/291 (50%), Positives = 216/291 (75%), Gaps = 18/291 (6%)

Query  36   LSPQCLEYKVVGICYWLLCGPHGCKVKTSVKVRHYVPDAVVSSYANTGSNPWTEVSAL--  93
            +SP C+  ++ GICYWL+C P GC VKTS+KV+H++P+AVVS+Y  +G+NPWTE+S +  
Sbjct  36   ISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQ  95

Query  94   ----------GTPNPLAQAGNDATTNYKAE-NSIGRFKEADVIGHPGGATFSRFASASGY  142
                      G+ + LA +G +   ++ +  +S  RFK AD IGHP+ + ++  +  +GY
Sbjct  96   TAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGY  153

Query  143  VCPGATFPLVPYFLSTLDAIGWRHGIPEQVYPEALVPGLREVGGVFSGDMWGNLYPRSGF  202
             C +A+ PLVPYFLSTLD+++WR G+PE VYPEAL+PG RE+G+  + ++WGNLYPRSGF
Sbjct  154  SCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGF  213

Query  203  LHQTDDYKTAAVIAQRAGDITTRVGQLHVYLPMRAAPKDGYWPAGELKEGDASTG-KWQE  261
            + Q DDYK++A++AQR +DI TR  Q+HVY P+ + P  GYWP+  +KE  ++   KWQ+
Sbjct  214  VTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQ  273

Query  262  LTPSLSLNCAVFPNSGPKTQAVDGDYAWALWRPYSCCQRKGQIFLGSTDFQ  312
            L+P+LS++C+VFP++G  ++  +G+YAW+LW+PYSCC+R+GQ FL STD++
Sbjct  274  LSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

76) M062_04890 in NC_021577


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  276 bits (1033),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 145/291 (50%), Positives = 216/291 (75%), Gaps = 18/291 (6%)

Query  36   LSPQCLEYKVVGICYWLLCGPHGCKVKTSVKVRHYVPDAVVSSYANTGSNPWTEVSAL--  93
            +SP C+  ++ GICYWL+C P GC VKTS+KV+H++P+AVVS+Y  +G+NPWTE+S +  
Sbjct  36   ISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQ  95

Query  94   ----------GTPNPLAQAGNDATTNYK-TENSIGRFKEADVIGHPGGATFSRFASASGY  142
                      G+ + LA +G +   ++  T +S  RFK AD IGHP+ + ++  +  +GY
Sbjct  96   TAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGY  153

Query  143  VCPGATFPLVPYFLSTLDAIGWRHGIPEQVYPEALVPGLREVGGIFSGDMWGNLYPRSGF  202
             C +A+ PLVPYFLSTLD+++WR G+PE VYPEAL+PG RE+G+  + ++WGNLYPRSGF
Sbjct  154  SCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGF  213

Query  203  LHQTDDYKTAAVIAQRAGDITTRIGQLHVYLPMRAAPKDGYWPAGELKEGDASTG-KWQE  261
            + Q DDYK++A++AQR +DI TR  Q+HVY P+ + P  GYWP+  +KE  ++   KWQ+
Sbjct  214  VTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQ  273

Query  262  LTPSLSLNCAVFPNSGPKTQAVDGDYAWALWRPYSCCQRKGQIFLGSTDFQ  312
            L+P+LS++C+VFP++G  ++  +G+YAW+LW+PYSCC+R+GQ FL STD++
Sbjct  274  LSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

77) Bxe_A1180 in NC_007951


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  276 bits (1034),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 154/316 (49%), Positives = 229/316 (73%), Gaps = 20/316 (6%)

Query  10   RLRAGVASVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ ++ SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAVVSSYSNTGENPWIEVRPMSTPNPSAQAGGDGT------TNEDHENNLA-  120
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGAEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
                  +FK AD IGHP++ ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKTGAVIAQRAGDVVTRRGQLHV  234
             YPEALIPG RE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA++AQR +D++TR  Q+HV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANPRDGYWPAGALMEGDASTG-KWQELTPVLSSSCSVFPRSGSLTQAQQGDYAWA  293
            Y+PL +NP  GYWP+ ++ E  ++   KWQ+L+P LS SCSVFP +G +  A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWT  300

Query  294  LWRPYACCERRGQVFL  309
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

78) Alide2_1808 in NC_015422


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  276 bits (1031),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 147/290 (51%), Positives = 219/290 (76%), Gaps = 18/290 (6%)

Query  33   IVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGENPWLEV  92
            IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G NPW E+
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  93   RAMSMPNPTAKAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAALVFSQFA  139
              +S        +        + G  N+++      ++  +FK AD IGHP++ +++  +
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--G  148

Query  140  SASGYTCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREIGTRTGLNLWGNVY  199
              +GY+C++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREIG+ ++ N+WGN+Y
Sbjct  149  QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLY  208

Query  200  PRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLANARDGYWPAGALMETDASTG  259
            PR+GF+ Q DD KSGA+VAQR +DI+TR NQIHVY+PL +N+  GYWP+ ++ E  ++  
Sbjct  209  PRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQN  268

Query  260  -KWQELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFL  308
             KWQ+L+PTLS SC VFP++  ++ A++G+YAW+LW+PYSCC+RRGQ FL
Sbjct  269  HKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

79) L483_11835 in NC_021491


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  276 bits (1032),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 148/299 (50%), Positives = 213/299 (72%), Gaps = 19/299 (6%)

Query  39   TTPTLIASVSSLQCLEYRVVGICYWLLCTPFGCTVRTSPKIRHFIPELVVSSYADTGANP  98
             T++++AS  S  C+  R+ GICYWL+CTPFGCTV+TS K++HFIPE VVS+Y  +G+NP
Sbjct  27   NTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNP  86

Query  99   WSEMSALSAPTPASQ------------GGGNLIT--PSPQRDNLPRFKNVDGIGHPGGAA  144
            W+EMS +S  + + +            GGGN     P+ ++ N+ RFK  D+IGHP+ + 
Sbjct  87   WTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNV-RFKYADAIGHPSTSI  145

Query  145  LTALAHTFGYACPSGAVPFAPYYLSTLDPLAWRQAVPESFYPQALAPGVREIGNQALGDM  204
            + +  +  GY+C S+A P+ PY+LSTLD LAWR +VPES YP+AL PG REIG+ +  ++
Sbjct  146  IGG--QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNI  203

Query  205  WGSVYPRHGFLVQPDDFKAAAVMAQRASDFITRVGQPHVYLPLQPMPAPGYWPPQPVMEN  264
            WG++YPR GF+ Q DD+K++A++AQR +D+ITR  Q HVY PL   P++GYWPP+PV EN
Sbjct  204  WGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKEN  263

Query  265  --TNNHRWQLLVPVIQNTCAIFPSPTIQSADGAYAWSLWRPYRCCQRMGQTFLFSIDFD  321
              T+NH+WQ L P +  +C++FP     + +G YAW+LW+PY CC+R GQTFL+S D++
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

80) Tgr7_2863 in NC_011901


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  276 bits (1031),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 159/320 (50%), Positives = 240/320 (75%), Gaps = 20/320 (6%)

Query  9    RTGMASVLLGTAASAF--ALNTATITGSVLSPDCLSYRVQGICYWLYCTLTGCTVRTSVK  66
            + ++ SV+L T++     ALNTA+I +S +SP C+S R+ GICYWL CT  GCTV+TS+K
Sbjct  7    KRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIK  66

Query  67   VQHYVPDAVVSSYSNTGENPWVEVRAMSMPNPTAQGG--------GDGTTNEEHE-----  113
            V+H++P+AVVS+Y  +G NPW E+  +S      + +        + G  N+E+      
Sbjct  67   VHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTR  126

Query  114  NNLAKFKNADVIGHPGATFFSEFVSQLGYSCAGAGTAFMPYLLSTLDTVAWRYNIPESVY  173
            ++  +FK AD IGHP++++++  ++  GYSC +A+T+++PY+LSTLDT+AWR  +PESVY
Sbjct  127  KSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVY  184

Query  174  PEALIPGMREIGTRTGLNLWGNVYPRGGLLHHVDDYKAAAVVAQRAGDIVTRRGQVHVYQ  233
            PEALIPG REIG+ ++ N+WGN+YPR+G++ + DDYK++A+VAQR +DI+TR  Q+HVY+
Sbjct  185  PEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYK  244

Query  234  PLLANASAGYWPAGALVESDASTG-KWQELTPRLSSSCGVFPHNNVRIQAQQGDYAWALW  292
            PL +N+SAGYWP+ ++ E+ ++   KWQ+L+P LS SC+VFP+   +I A++G+YAW+LW
Sbjct  245  PLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG-KI-AENGNYAWTLW  302

Query  293  RPYSCCQRRGQVFLGSTDFN  312
            +PYSCC+RRGQ FL STD+N
Sbjct  303  QPYSCCKRRGQTFLYSTDIN  322

81) KP1_0595 in NC_012731


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  276 bits (1032),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 153/317 (49%), Positives = 234/317 (74%), Gaps = 25/317 (7%)

Query  67   TLLLPLMLCAAFPLRA-ITTPEIAASALSPDCVNYRVVGLCYWLYCTPLGCSVRTSVKVR  125
            +LL  +++ ++  ++A + T+ I AS++SP C++ R+ G+CYWL CTP+GC+V+TS+KV+
Sbjct  9    ALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVH  68

Query  126  HFRPDLVVSAYSITGQNPWTEMS-----------SLSPPLPGIAEGGGDTNPR-TASQHS  173
            HF P+ VVS+Y  +G NPWTEMS           +++ +L+G+A GGG+ + +  +++ S
Sbjct  69   HFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKS  128

Query  174  KIRFKNADAIGFPAGDELATFFTQFGYICSPSSQPFQPYFLSQLDTLAWRSGVPEMTWPE  233
            ++RFK ADAIG P+   ++  +   GY C++++ P+ PYFLS LDTLAWR+GVPE   PE
Sbjct  129  NVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPE  186

Query  234  ALTPGLRDVGKDG--DMWGNIYPRAGAISQTHDYKAAAVIAQRVADLVTRTGQPHIYTPL  291
            AL PG R++G  +  ++WGN+YPR+G ++Q +DYK++A++AQRVAD++TRT Q H+Y PL
Sbjct  187  ALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPL  246

Query  292  AASSRAGYWPPSPIIEG-DSDNHRWQMLTPKKSAACSVFPDGSATDTYADKLAEDGAYAW  350
            ++++ AGYWPP P+ E  +++NH+WQ L+P  S +CSVFPD       ++K+AE+G YAW
Sbjct  247  TGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPD-------TGKIAENGNYAW  299

Query  351  TLWRPYKCCPRRGQTFL  367
            TLW+PY CC RRGQTFL
Sbjct  300  TLWQPYSCCKRRGQTFL  316

82) Ajs_2182 in NC_008782


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  275 bits (1030),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 147/290 (51%), Positives = 217/290 (75%), Gaps = 18/290 (6%)

Query  33   IVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGENPWQEV  92
            IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G NPW E+
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  93   RAMSMPNPTAKAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAGMVFSQFA  139
              +S        +        + G  N+++      ++  +FK AD IGHP+  +++  +
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--G  148

Query  140  SASGYTCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREIGTRTGLNLWGNVY  199
              +GY+C++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREIG+ ++ N+WGN+Y
Sbjct  149  QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLY  208

Query  200  PRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLANARDGYWPAGALMETDASTG  259
            PR+GF+ Q DD KSGA+VAQR +DI+TR NQIHVY+PL +N+  GYWP+ ++ E  ++  
Sbjct  209  PRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQN  268

Query  260  -KWQELTPTLSNSCVVFPHSRTRVQAQRGDYAWALWRPYSCCRRRGQVFL  308
             KWQ+L+PTLS SC VFP++  ++ A+ G+YAW+LW+PYSCC+RRGQ FL
Sbjct  269  HKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

83) BN117_0515 in NC_018828


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  275 bits (1030),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 147/290 (51%), Positives = 218/290 (76%), Gaps = 18/290 (6%)

Query  33   IVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGENPWLEV  92
            IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G NPW E+
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  93   RAMSMPNPTAKAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAGMVFSQFA  139
              +S        +        + G  N+++      ++  +FK AD IGHP+  +++  +
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--G  148

Query  140  SASGYTCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREIGTRTGLNLWGNVY  199
              +GY+C++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREIG+ ++ N+WGN+Y
Sbjct  149  QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLY  208

Query  200  PRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLANARDGYWPAGALMETDASTG  259
            PR+GF+ Q DD KSGA+VAQR +DI+TR NQIHVY+PL +N+  GYWP+ ++ E  ++  
Sbjct  209  PRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQN  268

Query  260  -KWQELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFL  308
             KWQ+L+PTLS SC VFP++  ++ A++G+YAW+LW+PYSCC+RRGQ FL
Sbjct  269  HKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

84) PSTAB_1223 in NC_015740


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  275 bits (1030),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 147/290 (51%), Positives = 218/290 (76%), Gaps = 18/290 (6%)

Query  33   IVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGENPWLEV  92
            IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G NPW E+
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  93   RAMSMPNPTAKAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAGMVFSQFA  139
              +S        +        + G  N+++      ++  +FK AD IGHP+  +++  +
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--G  148

Query  140  SASGYTCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREIGTRTGLNLWGNVY  199
              +GY+C++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREIG+ ++ N+WGN+Y
Sbjct  149  QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLY  208

Query  200  PRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLANARDGYWPAGALMETDASTG  259
            PR+GF+ Q DD KSGA+VAQR +DI+TR NQIHVY+PL +N+  GYWP+ ++ E  ++  
Sbjct  209  PRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQN  268

Query  260  -KWQELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFL  308
             KWQ+L+PTLS SC VFP++  ++ A++G+YAW+LW+PYSCC+RRGQ FL
Sbjct  269  HKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

85) NH44784_008481 in NC_021285


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  275 bits (1030),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 154/312 (50%), Positives = 232/312 (75%), Gaps = 20/312 (6%)

Query  1    MLCVAGSAL--ALNTATIITSALSPDCLEYRVVGICYWLFCSWGGCTVRTSVKVRHYIPD  58
            ML  +G  +  ALNTA+I++S++SP C+  R+ GICYWL C+  GCTV+TS+KV+H+IP+
Sbjct  14   MLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPE  73

Query  59   AVVSSYSNTGENPWIEMRLMSLPNPTAQAG--------GDGTTNQDRE-----NNLAKFK  105
            AVVS+Y  +G NPW EM L+S      + +        + G  NQ++      ++  +FK
Sbjct  74   AVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFK  133

Query  106  NADVIGHPAATVFSRYASQFGYTCTGAGTAFMPYLLSTLDTVAWRYDVPEAVYPEALIPG  165
             AD IGHP++++++  +   GY+C +A+T+++PY+LSTLDT+AWR +VPE+VYPEALIPG
Sbjct  134  YADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPG  191

Query  166  MREIGGRLTMNLWGNVYPRGGLLHQTDDYKSGAVVAQRAGDVVTRSGQIHVYQPLLASAH  225
             REIG+  + N+WGN+YPR+G++ Q DDYKSGA+VAQR +D++TR+ QIHVY+PL +++ 
Sbjct  192  RREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPS  251

Query  226  DGYWPAGALTESDASTG-KWQELTPTLSTTCAVFPNSNVHVQATQGDYAWALWRPYACCE  284
             GYWP+ ++ E+ ++   KWQ+L+PTLS +C+VFP++    +  +G+YAW+LW+PY+CC 
Sbjct  252  AGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCK  309

Query  285  RRGQVFLGSTDF  296
            RRGQ FL STD+
Sbjct  310  RRGQTFLYSTDI  321

86) Mpe_A2398 in NC_008825


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  275 bits (1030),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 147/294 (50%), Positives = 222/294 (76%), Gaps = 18/294 (6%)

Query  29   DTATIVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSSYSNTGENP  88
            +TA+IV+S++SP C+  R+ GICYWL CTPFGC+V+TS+KV+H++P+AVVS+Y  +G NP
Sbjct  27   NTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNP  86

Query  89   WLEVRAMSMPNPSAKAG--------GDGTTNHDNE-----NNLAKFKNTDVIGHPAGMVF  135
            W E+  +S    +   +        + G  N+++      ++  +FK +D IGHP+  ++
Sbjct  87   WTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSII  146

Query  136  SQFASASGHSCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREIGTRTGLNLW  195
            +  +  +G SC++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREIG+ ++ N+W
Sbjct  147  G--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIW  204

Query  196  GNVYPRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLANARDGYWPAGALMETD  255
            GN+YPR+GF+ Q DD KSGA+VAQR +DI+TR NQIHVY+PL +N+  GYWP+ ++ E  
Sbjct  205  GNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENT  264

Query  256  ASTG-KWHELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFL  308
            ++   KW++L+PTLS SC VFP++  ++ A++G+YAW+LW+PYSCC+RRGQ FL
Sbjct  265  GTQNHKWQQLSPTLSMSCSVFPDT-GKI-AENGNYAWTLWQPYSCCKRRGQTFL  316

87) A79E_4492 in NC_018522


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 153/317 (49%), Positives = 234/317 (74%), Gaps = 25/317 (7%)

Query  6    TLLLPLMLCAAFPLRA-ITTPEIAASALSPDCVNYRVVGLCYWLYCTPLGCSVRTSVKVR  64
            +LL  +++ ++  ++A + T+ I AS++SP C++ R+ G+CYWL CTP+GC+V+TS+KV+
Sbjct  9    ALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVH  68

Query  65   HFRPDLVVSAYSITGQNPWTEMS-----------SLSPPLPGIAEGGGDTNPR-TASQHS  112
            HF P+ VVS+Y  +G NPWTEMS           +++ +L+G+A GGG+ + +  +++ S
Sbjct  69   HFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKS  128

Query  113  KIRFKNADAIGFPAGDELATFFTQFGYICSPSSQPFQPYFLSQLDTLAWRSGVPEMTWPE  172
            ++RFK ADAIG P+   ++  +   GY C++++ P+ PYFLS LDTLAWR+GVPE   PE
Sbjct  129  NVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPE  186

Query  173  ALTPGLRDVGKDG--DMWGNIYPRAGAISQTHDYKAAAVIAQRVADLVTRTGQPHIYTPL  230
            AL PG R++G  +  ++WGN+YPR+G ++Q +DYK++A++AQRVAD++TRT Q H+Y PL
Sbjct  187  ALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPL  246

Query  231  AASSRAGYWPPSPIIEG-DSDNHRWQMLTPKKSAACSVFPDGSATDTYADKLAEDGAYAW  289
            ++++ AGYWPP P+ E  +++NH+WQ L+P  S +CSVFPD       ++K+AE+G YAW
Sbjct  247  TGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPD-------TGKIAENGNYAW  299

Query  290  TLWRPYKCCPRRGQTFL  306
            TLW+PY CC RRGQTFL
Sbjct  300  TLWQPYSCCKRRGQTFL  316

88) PSPTO_0849 in NC_004578


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 145/289 (51%), Positives = 220/289 (77%), Gaps = 18/289 (6%)

Query  38   PDCLEYKVVGICYWLLCTPFGCKVKTSTKVRHYVPDAVVSSYSNTGENPWVEVSSLSSPT  97
            P C+  ++ GICYWL+CTPFGC VKTS KV+H++P+AVVS+Y  +G NPW E+S +S  +
Sbjct  38   PSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTA  97

Query  98   SFAQDGGDGT------TSHNNEDNLA-------KFKNTDVIGHPGGATFSKFASASGYAC  144
            +  +++  G+       + N+E++++       +FK +D IGHP+ + ++  +  +GY+C
Sbjct  98   GGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSC  155

Query  145  QGAATPYMPYLLSTLDTIAWRYGVPESAYPEALIPGQREVGGLTSGDMWGSLYPRSGFIH  204
            ++AATP +PY+LSTLDT+AWR GVPES YPEALIPG+RE+G+ ++ ++WG+LYPRSGF+ 
Sbjct  156  NSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVT  215

Query  205  QADDYKAAAVIAQRAGDVVTRRGQIHIYQPLLAKPQSGYWPAGELIETDASTG-KWQELT  263
            Q DDYK++A++AQR +D++TR  QIH+Y+PL ++P +GYWP+  + E  ++   KWQ+L+
Sbjct  216  QQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLS  275

Query  264  PTLSQSCAVFPNSQPRVQATDGGYAWALWRPYSCCKRQGQTFLGSTDFQ  312
            PTLS SC+VFP++    +  +G YAW+LW+PYSCCKR+GQTFL STD++
Sbjct  276  PTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

89) Alide2_1957 in NC_015422


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  274 bits (1025),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 156/309 (51%), Positives = 227/309 (74%), Gaps = 18/309 (5%)

Query  22   GGAASSFALNTATIVSSALSPDCIEYRVVGICYWLFCTWTGCTVRTSVKVRHYVPDAVVS  81
            GG     ALNTA+IV+S++SP CI  R+ GICYWL CT  GCTV+TS+KV+H++P+AVVS
Sbjct  18   GGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVS  77

Query  82   SYSNTGENPWVEVRAMSTPNPTAQAG--------GDGTTNHDNE-----NNLAKFKNADV  128
            +Y  +G NPW E+  +S      + +        + G  N+++      ++  +FK AD 
Sbjct  78   TYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADA  137

Query  129  IGHPGGYVFSQFASSFGYSCEGAGTAFMPYLLSTLDTIAWRYNIPEAFYPEALIPGRREI  188
            IGHP+  +++  +   GYSC++A+T+++PY+LSTLDT+AWR  +PE+ YPEALIPGRREI
Sbjct  138  IGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREI  195

Query  189  GTRTGLNLWGNVYARGGFLHQTDDHKSGAVVAQRAGDVVTRRNQIHVYQPLLANSRDGYW  248
            G+ ++ N+WGN+Y+R+GF+ Q DD KSGA+VAQR +D++TR NQIHVY+PL +N+  GYW
Sbjct  196  GSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYW  255

Query  249  PAGALMETDASTG-KWQPLTPTLSNSCVVFPHSGSLTQAQQGDYAWALWRPYACCQRRGQ  307
            P+ ++ E  ++   KWQ L+PTLS SC VFP++G +  A++G+YAW+LW+PY+CC+RRGQ
Sbjct  256  PPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQ  313

Query  308  VFLGSVDFN  316
             FL S D+N
Sbjct  314  TFLYSTDIN  322

90) ebA2398 in NC_006513


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  274 bits (1025),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 146/296 (50%), Positives = 220/296 (75%), Gaps = 18/296 (6%)

Query  29   ALDTATIVASALSPNCLEYRVVGVCYWLFCTMFGCSVRTSVRVRHYVPDAVVSSYSNTGA  88
            AL+TA+IVAS++SP+C+  R+ G+CYWL CT FGC+V+TS++V+H++P+AVVS+Y  +G+
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  89   NPWMEVRAMSMPNPTARAG--------GDGTTNHDNE-----NNLAKFKNADVIGHPAGL  135
            NPW E+  +S        +        + G  N+++      ++  +FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  136  VFSRFVSSSGYTCQGAGTPFMPYLLSTFDTLAWRYNIPELAYPEALIPGMREIGSRAALN  195
            +++  ++  GY+C++A+TP++PY+LST+DTLAWR  +PE  YPEALIPG REIGS +A N
Sbjct  145  IIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  196  LWGNVYPRGGFLHQADDYKSGAVVAQRAGDVVTRRVQPHVYQPLLASARAGYWPAGALVE  255
            +WGN+YPR+GF+ Q DDYKSGA+VAQR +D++TR  Q HVY+PL +++ AGYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  256  TDASTG-KWQELTPTLSTTCAVFPHGNTRVQARQGDYAWALWRPYACCQRRGQIFL  310
              ++   KWQ+L+PTLS +C+VFP+     +  +G+YAW+LW+PY+CC+RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFL  316

91) XC_1042 in NC_007086


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  273 bits (1022),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 150/302 (50%), Positives = 226/302 (75%), Gaps = 18/302 (5%)

Query  25   ALNTASIVSSTLSPDCLEYRVVGICYWLYCTLTGCTVRTSIKVRHYVPDAVVSSYSNVGE  84
            ALNTASIV+S++SP C+  R+ GICYWL CT  GCTV+TSIKV+H++P+AVVS+Y   G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  85   NPWVEVRAMSKPNATARSG--------GDGTTNHDNE-----NNLIKFKNADVIGHPGGQ  131
            NPW E+  +S+  +   ++        + G  N+++      ++ ++FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  132  VFSQFASASGYACEGAGTAFMPYLLSTLDTIAWRYNLPEVVYPEALIPGLREIGSRTDMN  191
            +++  +  +GY+C++A+T+++PY+LSTLDT+AWR  +PE VYPEALIPG REIGS +  N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  192  LWGAVYPRGGFMHQTDDHKAGAVVAQRAGDIVTRRGQLHVYQPLLASSRDGYWPAGALVE  251
            +WG +YPR+GF+ Q DD K+GA+VAQR +DI+TR  Q+HVY+PL +++  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  252  SDASTG-KWQQLTPRLSSTCAVFPQSGSLPQAAQGDYAWALWRPYSCCQRQGQVFLGSVD  310
            + ++   KWQQL+P LS +C+VFP++G +++  +G+YAW+LW+PYSCC+R+GQ FL S D
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFLYSTD  320

Query  311  FN  312
            +N
Sbjct  321  IN  322

92) XCC3115 in NC_003902


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  273 bits (1022),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 150/302 (50%), Positives = 226/302 (75%), Gaps = 18/302 (5%)

Query  25   ALNTASIVSSTLSPDCLEYRVVGICYWLYCTLTGCTVRTSIKVRHYVPDAVVSSYSNVGE  84
            ALNTASIV+S++SP C+  R+ GICYWL CT  GCTV+TSIKV+H++P+AVVS+Y   G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  85   NPWVEVRAMSKPNATARSG--------GDGTTNHDNE-----NNLIKFKNADVIGHPGGQ  131
            NPW E+  +S+  +   ++        + G  N+++      ++ ++FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  132  VFSQFASASGYACEGAGTAFMPYLLSTLDTIAWRYNLPEVVYPEALIPGLREIGSRTDMN  191
            +++  +  +GY+C++A+T+++PY+LSTLDT+AWR  +PE VYPEALIPG REIGS +  N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  192  LWGAVYPRGGFMHQTDDHKAGAVVAQRAGDIVTRRGQLHVYQPLLASSRDGYWPAGALVE  251
            +WG +YPR+GF+ Q DD K+GA+VAQR +DI+TR  Q+HVY+PL +++  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  252  SDASTG-KWQQLTPRLSSTCAVFPQSGSLPQAAQGDYAWALWRPYSCCQRQGQVFLGSVD  310
            + ++   KWQQL+P LS +C+VFP++G +++  +G+YAW+LW+PYSCC+R+GQ FL S D
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFLYSTD  320

Query  311  FN  312
            +N
Sbjct  321  IN  322

93) PSTAB_2490 in NC_015740


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  273 bits (1022),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 147/322 (46%), Positives = 233/322 (73%), Gaps = 20/322 (6%)

Query  6    RLRAGIAAILLTMGVPSF--ALDTSTIASSTLSPDCLEYRVAGICFWLLCTYFSYSVETS  63
            RL+ ++ +++L  G      AL+T++I +S++SP C+  R++GIC+WL+CT F+ +V TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  64   VKVRHYVPDAVVSSYSNTGENPWVDVQSISQPNAMAQAGGDGT------TNENHENNLA-  116
            +KV+H++P+AVVS+Y  +G NPW ++  +SQ  +  + +  G+         N+E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  117  ------KFKNADVIGHPGGYVLSQFASGFGYICKGAGTAFMPYLLSTLDTIAWRYNIPEM  170
                  +FK AD IGHP+  +++   +G  Y C++A+T+++PY+LSTLDT+AWR  +PE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIPG--YSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  171  VYPEALTPGEREIGTRTDRNLWGNVYPRGGFLHQSDDYMAGAVVAQRAGDVVTRRGQIHV  230
            VYPEAL PG REIG+ + +N+WGN+YPR+GF+ Q DDY +GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  231  YQPLLADAEDGYWPAGELVESDATTG-KWQELTPTLSPTCAVFPHSENRVQAQQGDYAWA  289
            Y+PL +++  GYWP+  + E+ +T   KWQ+L+PTLS +C+VFP++ +   A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGK--IAENGNYAWT  300

Query  290  LWRPYSCCEREGQVFLGSVDFN  311
            LW+PYSCC R GQ FL S D+N
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

94) NH44784_010381 in NC_021285


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  273 bits (1022),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 151/316 (48%), Positives = 229/316 (73%), Gaps = 20/316 (6%)

Query  10   RLRAGVASVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ ++ SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAIVSSYSNTGENPWIEVRPMSTPNPSAQTGGDGT------TNEDHENNLA-  120
            IKV+H+IP+A+VS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLGTLDTLAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+L+TLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKASAVVAQRAGDVVTRRGQIHV  234
             YPEALIPG RE+G+ ++ N+WGN+YPR+GF+ Q DD K++A+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRDGYWPAGALMESDASTG-KWQELTPVLSSSCSVFPRSGALTQARQGDYAWA  293
            Y+PL +N+  GYWP+ ++ E+ ++   KWQ+L+P LS SCSVFP +G +++  +G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWT  300

Query  294  LWRPYACCERRGQVFL  309
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

95) HEAR2024 in NC_009138


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  273 bits (1022),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 151/316 (48%), Positives = 229/316 (73%), Gaps = 20/316 (6%)

Query  10   RLRAGVASVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ ++ SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAIVSSYSNTGENPWIEVRPMSTPNPSAQTGGDGT------TNEDHENNLA-  120
            IKV+H+IP+A+VS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLGTLDTLAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+L+TLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKASAVVAQRAGDVVTRRGQIHV  234
             YPEALIPG RE+G+ ++ N+WGN+YPR+GF+ Q DD K++A+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRDGYWPAGALMESDASTG-KWQELTPVLSSSCSVFPRSGALTQARQGDYAWA  293
            Y+PL +N+  GYWP+ ++ E+ ++   KWQ+L+P LS SCSVFP +G +++  +G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWT  300

Query  294  LWRPYACCERRGQVFL  309
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

96) Plav_3428 in NC_009719


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1019),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 155/316 (50%), Positives = 226/316 (72%), Gaps = 20/316 (6%)

Query  10   RLRAGVASVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ ++ SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   VKVRHYIPDAVVSSYSNTGENPWAEVRAMSTPNPSAQAGGDGT------TNEDHENNLA-  120
            +KV+H+IP+AVVS+Y  +G NPW+E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGTREIGVRSTLNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQLHV  234
             YPEALIPG REIG  S+ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  Q+HV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANARDGYWPAGELVEGDASTG-KWQELTPVLSSSCSVFPRNGSLTQAQQGDYAWA  293
            Y+PL +N+  GYWP+  + E  ++   KWQ+L+P LS SCSVFP  G +  A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWT  300

Query  294  LWRPYACCERRGQVFL  309
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

97) NH44784_009431 in NC_021285


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 147/296 (50%), Positives = 217/296 (74%), Gaps = 18/296 (6%)

Query  29   ALNTATIVSSVMSPDCLEYRVVGICYWLYCTWTGCTVRTSTKVRHYVPDAVVSSYSNTGE  88
            ALNTA+IV+S +SP C+  R+ GICYWL CT  GCTV+TS KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  89   NPWVEVQAMSTPNPSAQAGGDGT------TNEDHENNLA-------KFKNSDVIGHPGGE  135
            NPW E+  +S    + + +  G+         ++E++++       +FK +D IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  136  VFNQFASSSGYFCQGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEALIPGMREVGARTTMN  195
            ++   +  +GY C++A+T+++PY+LSTLDTLAWR  VPE  YPEALIPG RE+G+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  196  LWGNVYPRGGFLHQTDDYKSGAVVAQRAGDVVTRRGQIHVYQPLLANARDGYWPAGALME  255
            +WGN+YPR+GF+ Q DDYKSGA+VAQR +D++TR  QIHVY+PL +N+  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  256  GDASTG-KWQELTPRLSNTCVVFPHSGTLTQAQQGDYAWALWRPYACCERRGQVFL  310
              ++   KWQ+L+P LS +C VFP++G +  A++G+YAW+LW+PY+CC RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQTFL  316

98) Neut_0076 in NC_008344


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 147/296 (50%), Positives = 220/296 (75%), Gaps = 18/296 (6%)

Query  29   IVASTLSPSCLEYRVVGICYWLSCGVGGCRIRTSIKVRHYVPDAVVSSYSNTGANPWVEV  88
            IVAS++SPSC+  R+ GICYWL C   GC ++TSIKV+H++P+AVVS+Y  +G+NPW E+
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  89   RPMSLPNPTAQAGGDGT------TNDDHENNLA-------KFKNSDVIGHPGGEVFNEFV  135
              +S      + +  G+        +++E++++       +FK +D IGHP+  ++   +
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI  150

Query  136  AGSGYFCQGAGTAFVPYLLSTLDTLAWRYNVPEAVYPESLIPGQREVGSRSDMNLWGNVY  195
            +G  Y C++A+T++VPY+LSTLDTLAWR  VPE+VYPE+LIPG+RE+GS S  N+WGN+Y
Sbjct  151  PG--YSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLY  208

Query  196  PRGGFLHQTDDYKAGAIVAQRAGDVVTRRGQLHVYQPLLASSRAGYWPAGALIEGDASTG  255
            PR+GF+ Q DDYK+GAIVAQR +D++TR  Q+HVY+PL +++ AGYWP+ ++ E  ++  
Sbjct  209  PRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQN  268

Query  256  -KWQELTPRLSNTCTVFPHNETLTQAKQGDYAWVLWRPYSCCQRRGQTFLGSVDFN  310
             KWQ+L+P LS +C+VFP+   +++  +G+YAW LW+PYSCC+RRGQTFL S D+N
Sbjct  269  HKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

99) SMD_1512 in NC_017671


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 147/296 (50%), Positives = 217/296 (74%), Gaps = 18/296 (6%)

Query  29   ALNTATIVSSVMSPDCLEYRVVGICYWLYCTWTGCTVRTSTKVRHYVPDAVVSSYSNTGE  88
            ALNTA+IV+S +SP C+  R+ GICYWL CT  GCTV+TS KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  89   NPWVEVQAMSTPNPSAQAGGDGT------TNEDHENNLA-------KFKNSDVIGHPGGE  135
            NPW E+  +S    + + +  G+         ++E++++       +FK +D IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  136  VFNQFASSSGYFCQGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEALIPGMREVGARTTMN  195
            ++   +  +GY C++A+T+++PY+LSTLDTLAWR  VPE  YPEALIPG RE+G+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  196  LWGNVYPRGGFLHQTDDYKSGAVVAQRAGDVVTRRGQIHVYQPLLANARDGYWPAGALME  255
            +WGN+YPR+GF+ Q DDYKSGA+VAQR +D++TR  QIHVY+PL +N+  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  256  GDASTG-KWQELTPRLSNTCVVFPHSGTLTQAQQGDYAWALWRPYACCERRGQVFL  310
              ++   KWQ+L+P LS +C VFP++G +  A++G+YAW+LW+PY+CC RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQTFL  316

100) TMO_c0033 in NC_017958


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 147/296 (50%), Positives = 216/296 (73%), Gaps = 18/296 (6%)

Query  29   ALNTATIVSSVMSPDCLEYRVVGICYWLYCTWTGCTVRTSTKVRHYVPDAVVSSYSNTGE  88
            ALNTA+IV+S +SP C+  R+ GICYWL CT  GCTV+TS KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  89   NPWVEVQAMSTPNPSAQAG--------GDGTTNEDHD-----NNLAKFKNSDVIGHPGGE  135
            NPW E+  +S    + + +        + G  N+++      ++  +FK +D IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  136  VFNQFASSSGYFCQGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEALIPGMREVGARTTMN  195
            ++   +  +GY C++A+T+++PY+LSTLDTLAWR  VPE  YPEALIPG RE+G+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  196  LWGNVYPRGGFLHQTDDYKSGAVVAQRAGDVVTRRGQIHVYQPLLANARDGYWPAGALME  255
            +WGN+YPR+GF+ Q DDYKSGA+VAQR +D++TR  QIHVY+PL +N+  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  256  GDASTG-KWQELTPRLSNTCVVFPHSGTLTQAQQGDYAWALWRPYACCERRGQVFL  310
              ++   KWQ+L+P LS +C VFP++G +  A++G+YAW+LW+PY+CC RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQTFL  316

101) Ajs_1252 in NC_008782


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 151/316 (48%), Positives = 226/316 (72%), Gaps = 20/316 (6%)

Query  10   RLRVPVASLLLATAT--GSYALNTATIVSSVMSPDCLEYRVVGICYWLYCTYGGCSVRTS  67
            RL+ ++ S++L T+      ALNTA+IV+S +SP C+  R+ GICYWL CT  GC+V+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   VKVRHYVPDAVVSSYSNTGENPWVEVQAMSTPNPSAQAG--------GDGTTNEDHE---  116
            +KV+H++P+AVVS+Y  +G NPW E+  +S    + + +        + G  N+++    
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  117  --NDLAKFKNADVIGHPGGEVFNQFASSSGYFCQGAGTAFMPYLLSTLDTLAWRYNVPEM  174
              +   +FK AD IGHP+  ++   +  +GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALIPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKSGAVVAQRAGDVVTRRGQLHV  234
             YPEALIPG RE+G+ ++ N+WGN+YPR+GF+ Q DD KSGA+VAQR +D++TR  Q+HV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANARDGYWPAGALVEG-DTSTGKWQELTPRLSNTCVVFPHSGTLTQAQQGDYAWA  293
            Y+PL +N+  GYWP+ ++ E  +T   KWQ+L+P LS +C VFP++G +  A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWT  300

Query  294  LWRPYACCERRGQVFL  309
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

102) G655_20400 in NC_020912


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1019),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 154/326 (48%), Positives = 237/326 (73%), Gaps = 18/326 (5%)

Query  1    MTSLNLRRlaaaaatfslsftasaainsaaivsstLSPQCLEYKVVGICYWLLCGPHGCK  60
            M SL L+R   +   ++ +    AA+N+A+IV+S++SP C+  ++ GICYWL+C P GC 
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  61   VKTSVKVRHYVPDAVVSSYANTGSSPWTEVSAL------------GTPNPFAQAGNDATT  108
            VKTS+KV+H++P+AVVS+Y  +G++PWTE+S +            G+ + +A +G +   
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  109  N-CKAENSIGRFKEADVIGHPGGATFSRFASASGYVCPGATFPLVPYFLSTLDAIGWRHG  167
            +   + +S  RFK AD IGHP+ + ++  +  +GY C +A+ PLVPYFLSTLD+++WR G
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  168  IPEQVYPEALVPGLREVGGIFSGDMWGNLYPRSGFLHQTDDYKTAAVIAQRAGDITTRVG  227
            +PE VYPEAL+PG RE+G+  + ++WGNLYPRSGF+ Q DDYK++A++AQR +DI TR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  228  QLHVYLPMRAAPKDGYWPAGELKEGDASTG-KWQELTPSLSLNCAVFPNSGPKTQALDGD  286
            Q+HVY P+ + P  GYWP+  +KE  ++   KWQ+L+P+LS++C+VFP++G  ++  +G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAE--NGN  296

Query  287  YAWALWRPYSCCQRKGQIFLGSTDFQ  312
            YAW+LW+PYSCC+R+GQ FL STD++
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

103) A464_4497 in NC_021870


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 152/317 (48%), Positives = 233/317 (74%), Gaps = 25/317 (7%)

Query  23   PLLLPLMLCAAFPLRA-ITTPEIAASALSPDCVNYRVVGLCYWLYCTPLGCSVRTSVKVS  81
            +LL  +++ ++  ++A + T+ I AS++SP C++ R+ G+CYWL CTP+GC+V+TS+KV 
Sbjct  9    ALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVH  68

Query  82   HFRPDLVVSAYSNTGQSPWTEMSLLSP-----------ALPGIAESGGDTNPR-AASQHS  129
            HF P+ VVS+Y  +G +PWTEMSL+S            AL+G+A +GG+ + + ++++ S
Sbjct  69   HFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKS  128

Query  130  KIRFKNADAIGFPAGDELAKFFTQFGYICSPSSQLFQPYFLSQLDTLAWRSGVPEMTWPE  189
            ++RFK ADAIG P+   ++  +   GY C++++  + PYFLS LDTLAWR+GVPE   PE
Sbjct  129  NVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPE  186

Query  190  ALTPGMREVSQSG--DMWGNIYPRAGAISQTHDYKAAAVIVQRVADLVTRTGQPHIYTPL  247
            AL PG RE++ ++  ++WGN+YPR+G ++Q +DYK++A++ QRVAD++TRT Q H+Y PL
Sbjct  187  ALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPL  246

Query  248  TASSRAGYWPPSPVIEG-DSDNHRWQMLTPKKSAACSVFPDGSVTDTYADRLANDGAYAW  306
            T+++ AGYWPP PV E  +++NH+WQ L+P  S +CSVFPD       ++++A++G YAW
Sbjct  247  TGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPD-------TGKIAENGNYAW  299

Query  307  TLWRPYKCCPRRGQTFL  323
            TLW+PY CC RRGQTFL
Sbjct  300  TLWQPYSCCKRRGQTFL  316

104) Rmet_2357 in NC_007973


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  272 bits (1016),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 145/296 (49%), Positives = 217/296 (74%), Gaps = 18/296 (6%)

Query  29   ALNTVTIVSSVMSPDCLEYRVVGICYWLYCTYGGCSVRTSTKVRHYVPDAVVSSYSNTGE  88
            ALNT +IV+S +SP C+  R+ GICYWL CT  GC+V+TS KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  89   NPWVEVRAMSMPNASAQAGGDGT------TNEDHENNLA-------KFKNADVIGHPGGE  135
            NPW E+  +S   ++ + +  G+         ++E++++       +FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  136  VFNQFASSSGYFCQGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEALIPGRREVGARTTMN  195
            ++   +  +GY C++A+T+++PY+LSTLDTLAWR  VPE  YPEALIPGRRE+G+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  196  LWGNVYPRGGFLHQTDDHKSGAVVAQRAGDVVTRRGQLHVYQPLLANARDGYWPAGALME  255
            +WGN+YPR+GF+ Q DD KSGA+VAQR +D++TR  Q+HVY+PL +N+  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  256  GDASTG-KWQELTPRLSNTCVVFPHSGTLTQAQQGDYAWALWRPYACCERRGQVFL  310
              ++   KWQ+L+P LS +C VFP++G +  A++G+YAW+LW+PY+CC RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQTFL  316

105) Aave_0490 in NC_008752


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  271 bits (1015),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 162/325 (50%), Positives = 237/325 (73%), Gaps = 20/325 (6%)

Query  1    MRSKRLRAATFGVLL--AATLPTYALDTATIVASAFSPDCFAYRVSGICYWLYCTWSGCT  58
            M+S RL+ A ++V+L  ++     AL+TA+IVAS++SP C++ R+SGICYWL CT  GCT
Sbjct  1    MKSLRLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  59   VRTSVKVRHYVPDAVVSSYSNTGANPWVEVRAMSVPNPTAQAG--------GDGTTNQSH  110
            V+TS+KV+H++P+AVVS+Y  +G+NPW E+  +S      + +        + G  NQ +
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  111  E-----NNLAKFKNADVIGHPAGEafsafasasGYTCEGAGTPFMPYLLSTFDTLAWRYN  165
                  ++  +FK AD IGHP+   +++  +  GY+C++A+TP++PY+LST+DTLAWR  
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  166  VPELAYPESLTPGMREIGSRLSVDLWGNVYPRGGFLHQTDDYFSGAVVAQRAGDVVTRTG  225
            VPE  YPE+L PG REIGS  + ++WGN+YPR+GF+ Q DDY SGA+VAQR +D++TRT 
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  226  QPHVYQPLLASPRAGYWPAGPLVE-SNPDSGKWQELTPTLSSQCAVFPNRGPHVQAQQGD  284
            Q HVY+PL ++P AGYWP+ P+ E +  ++ KWQ+L+PTLS  C+VFP+ G    A++G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGK--IAENGN  296

Query  285  YAWALWRPYSCCQRRGQVFLGSTDF  309
            YAW+LW+PYSCC+RRGQ FL STD+
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDI  321

106) XCAW_01693 in NC_020815


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  271 bits (1013),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 150/305 (50%), Positives = 220/305 (73%), Gaps = 21/305 (6%)

Query  28   ALNTATIVGSVASPDCLEYRVVGICYWLYCTVSGCAVRTSVKVRHYIPDAVVSSYNNTGE  87
            ALNTA+IV+S  SP C+  R+ GICYWL CT  GC+V+TS+KV+H+IP+AVVS+Y+ +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  88   NPWTEVRAMSASNATARAGGDGI------TNDDHENNLA-------RFKNADVIGHPGGE  134
            NPWTE+  +S + +    +  G         +++E++++       RFK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  135  VFNQFASSSGYFCEGAGMAFMPYLLSTLDTLAWRYNVPEMAYPEALTPGMREIGARSTSN  194
            ++   +  +GY C++A+ +++PY+LSTLDTLAWR  VPE  YPEAL PG REIG+ S+ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  195  LWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQVHVYQPLLANSRPGYWPAGALME  254
            +WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  Q+HVY+PL +N+ +GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  255  GNASTG-KWQELTPALSSSCTVFPRGGSLIQATQAQQGDYAWALWRPYVCCERRGQVFLG  313
              ++   KWQ+L+P+LS SC+VFP  G +     A++G+YAW+LW+PY CC RRGQ FL 
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI-----AENGNYAWTLWQPYSCCKRRGQTFLY  317

Query  314  SVDFD  318
            S D++
Sbjct  318  STDIN  322

107) Alide_4031 in NC_014910


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  271 bits (1012),  Expect = 5e-74, Method: Compositional matrix adjust.
 Identities = 154/316 (49%), Positives = 226/316 (72%), Gaps = 20/316 (6%)

Query  10   RMRAAVTSVLLLSAT--GSYALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            R++ A+ SV+L+++      ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   VKVRHYIPDAVVSSYSNTGENPWVEVRAMSTPNPSAQAGGDGT------TNEDHENNLA-  120
            +KV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E++++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTPAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDT AWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  VYPEALIPGMREVGARSTLNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHV  234
            VYPEALIPG RE+G+ S+ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLANSRDGYWPAGALMEGDASTG-KWQELTPVLSSSCTVFPRNGFLTQAQQGDYAWA  293
            Y+PL +N+  GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP  G    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERRGQVFL  309
            LW+PY+CC RRGQ FL
Sbjct  301  LWQPYSCCKRRGQTFL  316

108) BTI_2236 in NC_021173


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  270 bits (1008),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 149/302 (50%), Positives = 224/302 (75%), Gaps = 18/302 (5%)

Query  10   AINTATLITSVLSPDCLAWRVVGICYWLSCSTFGCTVQTSVKVRHYVPDAVVSSYSRTGS  69
            A+NTA++++S +SP C++WR+ GICYWL C+ FGCTV+TS+KV+H++P+AVVS+Y  +G+
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  70   NPWTEVSLMSAPLPFAQSGGNGT------TNQTHENNLAV-------FKNADVIGHPGMA  116
            NPWTE+SL+S      +++  G+          +E++++        FK AD IGHP+ +
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  117  AFSRFASQFGMTCSGAGVPFDPYLLSTLDTVAWRYGIPESVYPESLTPGVREIGSRLSAN  176
             ++   + +  +C++A+ P+ PY+LSTLDT+AWR G+PESVYPE+L PG REIGS  + N
Sbjct  145  IIGGQIPGY--SCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  177  LWGNVYPREGFLHQVDDFKSAAVVAQRAGDIVTRPGQPHLYQSLLAQPYDGYWPAGALVE  236
            +WGN+YPR GF+ Q DD+KS+A+VAQR +DI+TR  Q H+Y++L ++P  GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  237  -SDIRTGKWQPLVPQLSMTCAVFPNALPATQATDGGYAWTLWRPYACCKRMGQTFLGSTD  295
             ++ +  KWQ L P LSM+C+VFP++  +  A +G YAWTLW+PY+CCKR GQTFL STD
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDT--GKIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

Query  296  VE  297
            ++
Sbjct  321  IN  322

109) Pput_2953 in NC_009512


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  270 bits (1011),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 148/301 (50%), Positives = 214/301 (72%), Gaps = 18/301 (5%)

Query  55   ALTTPTVIASVTSLQCLEYRVVGICYWLLCTPFGCTVRTSPKIRHFIPELVVSSYADTGA  114
            AL T++++AS  S  C+  R+ GICYWL+CTPFGCTV+TS K++HFIPE VVS+Y  +G+
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  115  NPWSEMSALSTPTPASQ------------GGGNLIT--PSPQRDNLPRFKNVDGIghpgg  160
            NPW+EMS +S  + + +            GGGN     P+ ++ N+ RFK  D+IGHP+ 
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNV-RFKYADAIGHPST  143

Query  161  aaltalahtlgYACPSGAVPFAPYYLSTLDPLAWRQAIPESVYPQALVPGMREIGNQALG  220
            + + +      Y+C S+A P+ PY+LSTLD LAWR ++PESVYP+AL+PG REIG+ +  
Sbjct  144  SIIGGQIPG--YSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQ  201

Query  221  DMWGSVYPRHGFLVQPDDFKAAAVMAQRASDFITRVGQPHVYLPLQPMPAPGYWPPQPVM  280
            ++WG++YPR GF+ Q DD+K++A++AQR +D+ITR  Q HVY PL   P++GYWPP+PV 
Sbjct  202  NIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVK  261

Query  281  EN-NVNNHRWQLLVPVIQNTCAIFPSPTIQSADGAYAWSLWRPYRCCQRMGQTFLFSIDF  339
            EN   +NH+WQ L P +  +C++FP     + +G YAW+LW+PY CC+R GQTFL+S D+
Sbjct  262  ENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYAWTLWQPYSCCKRRGQTFLYSTDI  321

Query  340  D  340
            +
Sbjct  322  N  322

110) XCV2363 in NC_007508


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  270 bits (1010),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 151/322 (47%), Positives = 230/322 (72%), Gaps = 20/322 (6%)

Query  10   RLRAGVASVLLLSAT--GSYALDTATVVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTS  67
            RL+ ++ SV+L+++      AL+TA++V+S  SP C+  R+ GICYWL CT  GCTV+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   IKVRHYIPDAVVSSYSNTGENPWVEVRAMSTPNPSAQAGGDGT------TNEDHENDLA-  120
            IKV+H+IP+AVVS+Y  +G NPW E+  +S    + + +  G+         ++E+ ++ 
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  121  ------KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
                  +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALVPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHV  234
             YPEAL+PG RE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLADSRPGYWPAGALVEGDASTG-KWQELTPVLSSSCTVFPRNDFLTQAQQGDYAWA  293
            Y+PL +++ +GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP  +    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERKGQVFLGSVDFN  315
            LW+PY+CC R+GQ FL S D+N
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

111) Ajs_1394 in NC_008782


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  270 bits (1009),  Expect = 8e-74, Method: Compositional matrix adjust.
 Identities = 150/322 (47%), Positives = 229/322 (72%), Gaps = 20/322 (6%)

Query  10   RLRVPVASLLLATAT--GSYALNTATIVSSVMSPDCLEYRVVGICYWLYCTYGGCSVRTS  67
            RL+ ++ S++L T+      ALNTA+IV+S +SP C+  R+ GICYWL CT  GC+V+TS
Sbjct  5    RLKRALLSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTS  64

Query  68   VKVRHYVPDAVVSSYSNTGENPWVEVQAMSTPNPSAQAG--------GDGTTNEDHE---  116
            +KV+H++P+AVVS+Y  +G NPW E+  +S    + + +        + G  N+++    
Sbjct  65   IKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPG  124

Query  117  --NDLAKFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEM  174
              +   +FK AD IGHP+  ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE 
Sbjct  125  TRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPES  182

Query  175  AYPEALVPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHV  234
             YPEAL+PG RE+G+ ++ N+WGN+YPR+GF+ Q DD K+GA+VAQR +D++TR  QIHV
Sbjct  183  VYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHV  242

Query  235  YQPLLADSRPGYWPAGALVEGDASTG-KWQELTPVLSSSCTVFPRNDFLTQAQQGDYAWA  293
            Y+PL +++ +GYWP+ ++ E  ++   KWQ+L+P LS SC+VFP  +    A++G+YAW+
Sbjct  243  YKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWT  300

Query  294  LWRPYACCERKGQVFLGSVDFN  315
            LW+PY+CC R+GQ FL S D+N
Sbjct  301  LWQPYSCCKRRGQTFLYSTDIN  322

112) PSEBR_m637 in NC_015379


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 152/326 (47%), Positives = 222/326 (69%), Gaps = 21/326 (6%)

Query  2    LHLYSKPLRFIAVATAMGCPLSAFALNSATIIASSASPDCLAYRVVGVCYWLYCTNFGCE  61
            L+L    L  + ++ +M       ALN+A+I+ASS SP C++ R+ G+CYWL CT FGC 
Sbjct  4    LRLKRALLSVMLITGGMEVQA---ALNTASIVASSISPSCISWRISGICYWLMCTPFGCT  60

Query  62   VETSTKVRHYVPDAVVSSYSNTGENPWSDVRSMSSTNPSARGGGDGS-----PGIGHEND  116
            V TS KV+H++P+AVVS+Y  +G NPW+++  +S T  +   +  G+     +G G++++
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  117  L--------AKFKNADVIGHPGGATFSQFAGQSGYACQGAGQILMPYFLSTLDSLAWRYN  168
                      +FK AD IGHP+ + ++  +  +GY+C++A+  L+PYFLSTLD+LAWR  
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  169  IPEMVFPEALTPGVREIGSRTSANLWGAIYPRGGFLHGVDDYKCAAVIAQRAGDIITRRG  228
            +PE V+PEAL PG REIGS ++ N+WG +YPR+GF+   DDYK +A++AQR +DIITR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  229  QAHVYQPLLGTKQDGYWPAGPLKENDPSTG-KWQELKPNQSKTCAVFPNTLPHVQSPRGD  287
            Q HVY+PL G    GYWP+ P+KEN  +   KWQ+L P  S +C+VFP+T    ++  G+
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAEN--GN  296

Query  288  YAWALWRPYSCCERKGQVFLGSTDFA  313
            YAW+LW+PYSCC R+GQ FL STD+ 
Sbjct  297  YAWTLWQPYSCCKRRGQTFLYSTDIN  322

113) AXYL_01110 in NC_014640


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  267 bits (999),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 146/296 (50%), Positives = 215/296 (73%), Gaps = 18/296 (6%)

Query  29   ALNTATIVSSVMSPDCLEYRVVGICYWLYCTWTGCTVRTSTKVRHYVPDAVVSSYSNTGE  88
            ALNTA+IV+S +SP C+  R+ GICYWL CT  GCTV+TS KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  89   NPWVEVQAMSTPNPSAQAGGDGT------TNEDHENNLA-------KFKNSDVIGHPGGE  135
            NPW E+  +S    + + +  G+         ++E++++       +FK +D IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  136  VFNQFASSSGYFCQGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEALIPGMREVGARTTMN  195
            ++   +  +GY C++A+T+++PY+LSTLDTLAWR  VPE  YPEALIPG RE+G+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  196  LWGNVYPRGGFLHQTDDQKSGAVVAQRAGDVVTRRGQIHVYQPLLANARDGYWPAGELME  255
            +WGN+YPR+GF+ Q DD KSGA+VAQR +D++TR  QIHVY+PL +N+  GYWP+  + E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  256  GDASTG-KWQELTPRLSNTCVVFPHSGTLTQAQQGDYAWALWRPYACCERRGQVFL  310
              ++   KWQ+L+P LS +C VFP++G +  A++G+YAW+LW+PY+CC RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQTFL  316

114) PADK2_11950 in NC_018080


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  267 bits (999),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 146/296 (50%), Positives = 215/296 (73%), Gaps = 18/296 (6%)

Query  29   ALNTATIVSSVMSPDCLEYRVVGICYWLYCTWTGCTVRTSTKVRHYVPDAVVSSYSNTGE  88
            ALNTA+IV+S +SP C+  R+ GICYWL CT  GCTV+TS KV+H++P+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  89   NPWVEVQAMSTPNPSAQAGGDGT------TNEDHENNLA-------KFKNSDVIGHPGGE  135
            NPW E+  +S    + + +  G+         ++E++++       +FK +D IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  136  VFNQFASSSGYFCQGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEALIPGMREVGARTTMN  195
            ++   +  +GY C++A+T+++PY+LSTLDTLAWR  VPE  YPEALIPG RE+G+ ++ N
Sbjct  145  IIG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  196  LWGNVYPRGGFLHQTDDQKSGAVVAQRAGDVVTRRGQIHVYQPLLANARDGYWPAGELME  255
            +WGN+YPR+GF+ Q DD KSGA+VAQR +D++TR  QIHVY+PL +N+  GYWP+  + E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  256  GDASTG-KWQELTPRLSNTCVVFPHSGTLTQAQQGDYAWALWRPYACCERRGQVFL  310
              ++   KWQ+L+P LS +C VFP++G +  A++G+YAW+LW+PY+CC RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTGKI--AENGNYAWTLWQPYSCCKRRGQTFL  316

115) Bpet1085 in NC_010170


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 148/296 (50%), Positives = 216/296 (73%), Gaps = 18/296 (6%)

Query  18   ALNTATIVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTSVKVRHYIPDAVVSSYSNTGE  77
            ALNTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS+KV+H+IP+AVVS+Y  +G 
Sbjct  25   ALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGG  84

Query  78   NPWVEVRAMSTPNPSAQAGGDGT------TNEDHENNLA-------KFKNADVIGHPGVE  124
            NPW E+  +S    + + +  G+         ++E++++       +FK AD IGHP+  
Sbjct  85   NPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTS  144

Query  125  VFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEALIPGMREVGARSTLN  184
            ++   ++  GY C++A+T+++PY+LSTLDTLAWR  VPE  YPEALIPG RE+G+ S+ N
Sbjct  145  IIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQN  202

Query  185  LWGNVYPRGGLLHQMDDHKAGAVVAQRAGDVVTRRGQIHVYQPLLANSRPGYWPAGALME  244
            +WGN+YPR+G++ Q DD K+GA+VAQR +D++TR  QIHVY+PL +N+ +GYWP+ ++ E
Sbjct  203  IWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKE  262

Query  245  GDASTG-KWQELTPVLSSSCTVFPRSGFLTQAQQGDYAWALWRPYACCERRGQVFL  299
              ++   KWQ+L+P LS SC+VFP +G    A++G+YAW+LW+PY+CC RRGQ FL
Sbjct  263  NTGTQNHKWQQLSPTLSMSCSVFPDTG--KIAENGNYAWTLWQPYSCCKRRGQTFL  316

116) xccb100_2457 in NC_010688


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  263 bits (982),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 148/306 (49%), Positives = 218/306 (72%), Gaps = 24/306 (7%)

Query  30   NTATIVGSVASPDCLEYRVVGICYWLYCTVSGCTVRTSVKVRHYIPDAVVSSYNNTGENP  89
            NTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS+KV+H+IP+AVVS+Y+ +G NP
Sbjct  27   NTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNP  86

Query  90   WTDVRAMSASNATARAGGDGI------TNDDHENNLA-------RFKNADVIGHPGGEVF  136
            WT++  +S + +    +  G         +++E++++       RFK AD IGHP+  ++
Sbjct  87   WTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSII  146

Query  137  NQFASSSGYFCEGAGMAFMPYLLSTLDTLAWRYNVPEMSYPEALTPGIREIGARSTSNLW  196
               +  +GY C++A+ +++PY+LSTLDTLAWR  VPE  YPEAL PG REIG+ S+ N+W
Sbjct  147  G--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIW  204

Query  197  GNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQVHVYQPLLANSRPGYWPAGALMEGN  256
            GN+YPR+GF+ Q DD K+GA+VAQR +D++TR  Q+HVY+PL +N+ +GYWP+ ++ E  
Sbjct  205  GNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENT  264

Query  257  ASTG-KWQELTPALSSSCTVFPRGGSLIqatqttqaqqGDYAWALWRPYVCCERRGQVFL  315
            ++   KWQ+L+P+LS SC+VFP  G +        A++G+YAW+LW+PY CC RRGQ FL
Sbjct  265  GTQNHKWQQLSPTLSMSCSVFPDTGKI--------AENGNYAWTLWQPYSCCKRRGQTFL  316

Query  316  GSVDFD  321
             S D++
Sbjct  317  YSTDIN  322

117) XC_2027 in NC_007086


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  263 bits (984),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 148/306 (49%), Positives = 218/306 (72%), Gaps = 24/306 (7%)

Query  30   NTATIVGSVASPDCLEYRVVGICYWLYCTVSGCTVRTSVKVRHYIPDAVVSSYNNTGENP  89
            NTA+IV+S  SP C+  R+ GICYWL CT  GCTV+TS+KV+H+IP+AVVS+Y+ +G NP
Sbjct  27   NTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNP  86

Query  90   WTDVRAMSASNATARAGGDGI------TNDDHENNLA-------RFKNADVIGHPGGEVF  136
            WT++  +S + +    +  G         +++E++++       RFK AD IGHP+  ++
Sbjct  87   WTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSII  146

Query  137  NQFASSSGYFCEGAGMAFMPYLLSTLDTLAWRYNVPEMAYPEALTPGIREIGARSTSNLW  196
               +  +GY C++A+ +++PY+LSTLDTLAWR  VPE  YPEAL PG REIG+ S+ N+W
Sbjct  147  G--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIW  204

Query  197  GNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQVHVYQPLLANSRPGYWPAGALMEGN  256
            GN+YPR+GF+ Q DD K+GA+VAQR +D++TR  Q+HVY+PL +N+ +GYWP+ ++ E  
Sbjct  205  GNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENT  264

Query  257  ASTG-KWQELTPALSSSCTVFPRGGSLIqatqttqaqqGDYAWALWRPYVCCERRGQVFL  315
            ++   KWQ+L+P+LS SC+VFP  G +        A++G+YAW+LW+PY CC RRGQ FL
Sbjct  265  GTQNHKWQQLSPTLSMSCSVFPDTGKI--------AENGNYAWTLWQPYSCCKRRGQTFL  316

Query  316  GSVDFD  321
             S D++
Sbjct  317  YSTDIN  322

118) B5T_02111 in NC_018691


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  263 bits (984),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 151/318 (48%), Positives = 226/318 (72%), Gaps = 20/318 (6%)

Query  1    MGFFSLLGTAAPARAVDTASIVQSAWSQDCLQYRVVGVCLWLRCTPFGCSVRSSVKVGHY  60
            ++   + G      A++TASIV S+ S  C+  R+ G+C WL CTPFGC+V++S+KV H+
Sbjct  11   LSVMLITGGMEVQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHF  70

Query  61   IPELVVSSYQNTGNNPWRDVAFMSPSNGNARGGGVTAEGADAASSIGEE-----GIHNSL  115
            IPE VVS+YQ +G NPW +++++S + G    +   A ++ AA++  +E        +++
Sbjct  71   IPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNV  130

Query  116  RFKNGDAIGHPASTVF-SQFAGQWGYTCSTPARPLQPYFLSVLDTYAWREGLPEKIYPQA  174
            RFK +DAIGHP+++++ +Q++   GY+C+++A PL PYFLS LDT AWR G+PE +YP+A
Sbjct  131  RFKYADAIGHPSTSIIGGQIP---GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEA  187

Query  175  LTPGLREV-RQGLLNRWGNVYPRAGFVTQSNDYKAAAVVAQRVADLVTRNGQPHVYTPLV  233
            L PG RE+   +  N WGN+YPR+GFVTQ +DYK++A+VAQRVAD++TR  Q HVY PL 
Sbjct  188  LIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLT  247

Query  234  PRTRSSRGVWAPPPVKEG-DKDTHKWQRLTPAMTQSCAVFPDRGPAASFRGHLAQQGDYA  292
                +S G W+P PVKE  + + HKWQ+L+P+++ SC+VFPD        G +A++G+YA
Sbjct  248  --GNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPD-------TGKIAENGNYA  298

Query  293  WALWRPYSCCKKRGQKLL  310
            W+LW+PYSCCK+RGQ +L
Sbjct  299  WTLWQPYSCCKRRGQTFL  316

119) HS_1775 in NC_008309


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 154/302 (51%), Positives = 211/302 (70%), Gaps = 24/302 (7%)

Query  22   VQGEINTATIMASSASTGCLDYKVVGTCFWLFCTYFGCKVRTSTKVRHFLPEMVVSAYNH  81
            VQ+ +NTA+I+ASS S +C+  ++ G C+WL CT FGC V+TS KV+HF+PE VVS+Y+ 
Sbjct  22   VQAALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQA  81

Query  82   DGQNPWSEMNVVTQGVKGGEY------------------RSPQKNYSQLTFKNATALGHP  123
             G NPW+EM++V+Q   G E                   + P    S++ FK A A+GHP
Sbjct  82   SGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHP  141

Query  124  QGAIGNLLKSTGYYCQTQTTPFMPYFLSSLDYFAWQQNLPEMFYPEALTPGMREV--RSE  181
              +I    +  GY C++ +TP++PYFLS+LD +AW+  +PE  YPEAL PG RE+   S 
Sbjct  142  STSIIG-GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSA  200

Query  182  LEMWGNIFPRSGAVTQVDDYKASAVIAQRVADIVTRTGQVHIYQPVARTGGAGTWYPKPV  241
             ++WGN++PRSG VTQ DDYK++A++AQRVADI+TRT Q+H+Y+P++   +AG W P PV
Sbjct  201  QNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPV  260

Query  242  KEGNA-NNHKWQQLFPEMQQSCSAFPDTPPTMLSEKGNYAWALWRPYKCCKRRGQTFLYS  300
            KE  + +NHKWQQL P +  SCS FPDT    ++E+GNYAW+LW+PY CCKRRGQTFLYS
Sbjct  261  KENTGTQNHKWQQLSPTLSMSCSVFPDT--GKIAENGNYAWTLWQPYSCCKRRGQTFLYS  318

Query  301  ID  302
             D
Sbjct  319  TD  320

120) CNE_1c27710 in NC_015726


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  259 bits (967),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 143/296 (49%), Positives = 214/296 (73%), Gaps = 18/296 (6%)

Query  35   IVASSASPGCLEYRVVGICYWLYCSWSGCSVRTSLKVRHYVPDAVVSSYSNTGENPWMEV  94
            IVASS SP+C+  R+ GICYWL C+  GC+V+TS+KV+H++P+AVVS+Y  +G NPW E+
Sbjct  31   IVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEM  90

Query  95   RAMSMPNDTAQAGGDGTV--------NHGNDY-----NVAKFKNTDVIGHPAGSVFSEFA  141
              +S   +  + +  G++        N+ + +     +  +FK +D IGHP+ S+++  +
Sbjct  91   SLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSIIG--G  148

Query  142  RTFGYTCQGAGTAFMPYFLSTLDTAAWRYNVPEMAYPEALTSGMREIGSRVTGDLWGNVY  201
            +  GY+C++A+T+++PYFLSTLDT AWR  VPE  YPEAL +G REIGS  + ++WGN+Y
Sbjct  149  QIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLY  208

Query  202  PRGGFLHQTDDYKSAAVVAQRAGDVVTRRAQPHVYQPLLANTRDGYWPAGALLEGNASTG  261
            PR+GF+ Q DDYKS+A+VAQR +D++TR  Q HVY+PL +N   GYWP+ ++ E  ++  
Sbjct  209  PRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQN  268

Query  262  -KWQELSPTLSNSCAVFPHSSPRVQAKQGDYAWALWRPYACCQRRGQVFLGSVDLT  316
             KWQ+LSPTLS SC+VFP+++   +  +G+YAW+LW+PY+CC+RRGQ FL S D+ 
Sbjct  269  HKWQQLSPTLSMSCSVFPDTGKIAE--NGNYAWTLWQPYSCCKRRGQTFLYSTDIN  322

121) PFL_4710 in NC_004129


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  257 bits (962),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 147/305 (49%), Positives = 217/305 (72%), Gaps = 22/305 (7%)

Query  22   INTAAIVGSTASPTCLDYRVVGICYWLLCTPFGCKIKTSTKVRHYVPDAVVSAYANTGEN  81
            +NTA+IV+S+ SP+C+  R+ GICYWL+CTPFGC +KTS KV+H++P+AVVS+Y  +G N
Sbjct  26   LNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGN  85

Query  82   PWVEVSPMGRPnstaqagnngttnhnae-------------nnISKFKNADVIGHPGGAV  128
            PW E+S +++  +  + +  G+ +  A              ++  +FK AD IGHP+ ++
Sbjct  86   PWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSI  145

Query  129  FSKFAAASGYACPGATLPFVPYMLSTLDTLAWRHGIPEVVYPESLMPGLREVGGLLSTNM  188
            ++  +  +GY+C +A+ P+VPY LSTLDTLAWR G+PE VYPE+L+PG RE+G+  + N+
Sbjct  146  IG--GQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNI  203

Query  189  WGSIYPRSGFIHQSDDFKAAAVIAQRAGDITTRLGQPHVYVPMRTFPMPGYWPAGELLED  248
            WG++YPRSGF+ Q DD+K++A++AQR +DI TR  Q HVY P+   P +GYWP+  + E+
Sbjct  204  WGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKEN  263

Query  249  -DYSTGKWQQLTPSLSPTCATFPTSGWGIGTDMEAANGAYAWALWRPYSCCQRRGQIFLG  307
             +    KWQQL+P+LS +C+ FP +G        A NG YAW+LW+PYSCC+RRGQ FL 
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPDTG------KIAENGNYAWTLWQPYSCCKRRGQTFLY  317

Query  308  STDFQ  312
            STD++
Sbjct  318  STDIN  322

122) HELO_4068 in NC_014532


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  251 bits (936),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 137/304 (46%), Positives = 203/304 (67%), Gaps = 23/304 (7%)

Query  33   AEISTVEIAESALSPSCLDYRAIGICVWLTCTAWGCYTETSIKVTHYIPELVVSSYQRTG  92
            A ++T  I  S++SPSC+  R  GIC WL CT+ GC   TSIKV H+IPE VVS+YQ +G
Sbjct  24   AALNTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASG  83

Query  93   ENPWPAVRMMAPP------------NNLSQRGGTSTDRHSNNHQ-NLRFKNVDAIGHPAL  139
             NPW  + +++              + L+  GG   ++ +  ++ N+RFK  DAIGHP+ 
Sbjct  84   GNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPST  143

Query  140  ATFQSDWGGFLCKSRGKPMLPYFLSTLDPAAWRSNIPESGYPQALTPGVRELGQPG--DL  197
            + + ++  G+ C+S + P++PYFLSTLD  AWR+ +PES YP+AL PG RE+G  +  ++
Sbjct  144  SIIGGQIPGYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNI  203

Query  198  WGNIYPRGGFINQGNDYKAGAVAAQRVADVVTRTGQPHVYNPLLSHHDEGYWPPDPVKEG  257
            WGN+YPR+GF+ Q +DYK+GA+ AQRVAD++TRT Q HVY+PL ++   GYWPP+PVKE 
Sbjct  204  WGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLTGNPSAGYWPPEPVKEN  263

Query  258  -DRSTHRWQPLAPQMEDSCAVWPDRGPMATYQDRRDGSGDNVWAMWRPITCCARRGEELL  316
             +   H+WQ L+P +  SC+V PD G +A        +G+  W++W+P +CC RRG+ +L
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPDTGKIA-------ENGNYAWTLWQPYSCCKRRGQTFL  316

Query  317  FDTG  320
            + T+
Sbjct  317  YSTD  320

123) R2866_0571 in NC_017451


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  244 bits (911),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 157/333 (48%), Positives = 221/333 (67%), Gaps = 39/333 (11%)

Query  1    MKLKKMTLSGLCIAIALTSISGQASESGQSSLNtasimassastsCLDYKVVGTCFWLFC  60
            ++LK+  LS + I+ ++           Q++LNTASI+ASS S SC+  ++ G C+WL C
Sbjct  4    LRLKRALLSVMLITGGMEV---------QAALNTASIVASSISPSCISWRISGICYWLMC  54

Query  61   TKFGCKIRTSTKIKHYIPEVVVSSYNHQAQNPWVEMNFLSNGVKGGD-------------  107
            T FGC ++TS K+ H+IPE VVS+Y+  + NPW EM+++S+   G +             
Sbjct  55   TPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAG  114

Query  108  -------YQSPHKDYTQATFKNVDVIGHPQGAISQMLNSTGYYCKSQTTPFVPYYLSGLD  160
                   + + +K  ++  FK  D IGHP  +I    +  GY C+S +TP+VPY+LS LD
Sbjct  115  GGNQEQKFPGTRK--SNVRFKYADAIGHPSTSIIGG-QIPGYSCNSAATPLVPYFLSTLD  171

Query  161  FLAWRFGVPEMVYPEALIPGMREIRANG--DTWGNIYPRAGTVTQVHDYKASAVTAHRVA  218
             LAWR GVPE VYPEALIPG REI + +  + WGN+YPR+G VTQ +DYK++A+ A+RVA
Sbjct  172  TLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVA  231

Query  219  DVVTNTFQPHVYIPIAKKDNQSNGEWFPPPVKEG-DAKTHKWQQLHPVTSQSCAIFPDNP  277
            D++T T Q HVY P++  +N S G W P PVKE  +++ HKWQQL P  S SC++FPD  
Sbjct  232  DIITRTNQIHVYKPLT--GNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-  288

Query  278  PSMLSENGSYAWALWRPYKCCKKRGQTFLYSID  310
             + ++ENG+YAW+LW+PY CCK+RGQTFLYS D
Sbjct  289  -GKIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

124) HIB_01220 in NC_016809


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  244 bits (909),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 157/333 (48%), Positives = 220/333 (67%), Gaps = 39/333 (11%)

Query  1    MKLKKMTLSGLCIAIALTSISGQASESGQSSLNtasimassastsCLDYKVVGTCFWLFC  60
            ++LK+  LS + I+ ++           Q++LNTASI+ASS S SC+  ++ G C+WL C
Sbjct  4    LRLKRALLSVMLITGGMEV---------QAALNTASIVASSISPSCISWRISGICYWLMC  54

Query  61   TKFGCKIRTSTKIKHYIPEVVVSSYNHQAQNPWVEMNFLSNGVKGGD-------------  107
            T FGC ++TS K+ H+IPE VVS+Y+  + NPW EM+++S+   G +             
Sbjct  55   TPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAG  114

Query  108  -------YQSPHKDYTQATFKNVDVIGHPQGAISQMLNSTGYYCKSQTTPFVPYYLSGLD  160
                   + + +K  ++  FK  D IGHP  +I    +  GY C+S +TP+VPY+LS LD
Sbjct  115  GGNQEQKFPGTRK--SNVRFKYADAIGHPSTSIIGG-QIPGYSCNSAATPLVPYFLSTLD  171

Query  161  FLAWRFGVPEMVYPEALIPGMREIRANG--DTWGNIYPRAGTVTQVHDYKASAVTAHRVA  218
             LAWR GVPE VYPEALIPG REI + +  + WGN+YPR+G VTQ +DYK++A+ A+RVA
Sbjct  172  TLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVA  231

Query  219  DVVTNTFQPHVYIPIAKKDNQSNGEWFPPPVKEG-DEKTHKWQQLHPVTSQSCAIFPDNP  277
            D++T T Q HVY P++  +N S G W P PVKE  + + HKWQQL P  S SC++FPD  
Sbjct  232  DIITRTNQIHVYKPLT--GNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-  288

Query  278  PSMLSENGSYAWALWRPYKCCKKRGQTFLYSID  310
             + ++ENG+YAW+LW+PY CCK+RGQTFLYS D
Sbjct  289  -GKIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

125) NTHI0146 in NC_007146


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  244 bits (909),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 157/333 (48%), Positives = 220/333 (67%), Gaps = 39/333 (11%)

Query  1    MKLKKMTLSGLCIAIALTSISGQASESGQSSLNtasimassastsCLDYKVVGTCFWLFC  60
            ++LK+  LS + I+ ++           Q++LNTASI+ASS S SC+  ++ G C+WL C
Sbjct  4    LRLKRALLSVMLITGGMEV---------QAALNTASIVASSISPSCISWRISGICYWLMC  54

Query  61   TKFGCKIRTSTKIKHYIPEVVVSSYNHQAQNPWVEMNFLSNGVKGGD-------------  107
            T FGC ++TS K+ H+IPE VVS+Y+  + NPW EM+++S+   G +             
Sbjct  55   TPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAG  114

Query  108  -------YQSPHKDYTQATFKNVDVIGHPQGAISQMLNSTGYYCKSQTTPFVPYYLSGLD  160
                   + + +K  ++  FK  D IGHP  +I    +  GY C+S +TP+VPY+LS LD
Sbjct  115  GGNQEQKFPGTRK--SNVRFKYADAIGHPSTSIIGG-QIPGYSCNSAATPLVPYFLSTLD  171

Query  161  FLAWRFGVPEMVYPEALIPGMREIRANG--DTWGNIYPRAGTVTQVHDYKASAVTAHRVA  218
             LAWR GVPE VYPEALIPG REI + +  + WGN+YPR+G VTQ +DYK++A+ A+RVA
Sbjct  172  TLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVA  231

Query  219  DVVTNTFQPHVYIPIAKKDNQSNGEWFPPPVKEG-DEKTHKWQQLHPVTSQSCAIFPDNP  277
            D++T T Q HVY P++  +N S G W P PVKE  + + HKWQQL P  S SC++FPD  
Sbjct  232  DIITRTNQIHVYKPLT--GNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-  288

Query  278  PSMLSENGSYAWALWRPYKCCKKRGQTFLYSID  310
             + ++ENG+YAW+LW+PY CCK+RGQTFLYS D
Sbjct  289  -GKIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

126) PARA_11760 in NC_015964


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  244 bits (909),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 157/333 (48%), Positives = 220/333 (67%), Gaps = 39/333 (11%)

Query  1    MKLKKMTLSGLCIAIALTSISGQASESGQSSLNtasimassastsCLDYKVVGTCFWLFC  60
            ++LK+  LS + I+ ++           Q++LNTASI+ASS S SC+  ++ G C+WL C
Sbjct  4    LRLKRALLSVMLITGGMEV---------QAALNTASIVASSISPSCISWRISGICYWLMC  54

Query  61   TKFGCKIRTSTKIKHYIPEVVVSSYNHQAQNPWVEMNFLSNGVKGGD-------------  107
            T FGC ++TS K+ H+IPE VVS+Y+  + NPW EM+++S+   G +             
Sbjct  55   TPFGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAG  114

Query  108  -------YQSPHKDYTQATFKNVDVIGHPQGAISQMLNSTGYYCKSQTTPFVPYYLSGLD  160
                   + + +K  ++  FK  D IGHP  +I    +  GY C+S +TP+VPY+LS LD
Sbjct  115  GGNQEQKFPGTRK--SNVRFKYADAIGHPSTSIIGG-QIPGYSCNSAATPLVPYFLSTLD  171

Query  161  FLAWRFGVPEMVYPEALIPGMREIRANG--DTWGNIYPRAGTVTQVHDYKASAVTAHRVA  218
             LAWR GVPE VYPEALIPG REI + +  + WGN+YPR+G VTQ +DYK++A+ A+RVA
Sbjct  172  TLAWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVA  231

Query  219  DVVTNTFQPHVYIPIAKKDNQSNGEWFPPPVKEG-DEKTHKWQQLHPVTSQSCAIFPDNP  277
            D++T T Q HVY P++  +N S G W P PVKE  + + HKWQQL P  S SC++FPD  
Sbjct  232  DIITRTNQIHVYKPLT--GNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDT-  288

Query  278  PSMLSENGSYAWALWRPYKCCKKRGQTFLYSID  310
             + ++ENG+YAW+LW+PY CCK+RGQTFLYS D
Sbjct  289  -GKIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

127) HSM_1690 in NC_010519


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  242 bits (903),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 217/334 (65%), Gaps = 43/334 (12%)

Query  1    MKKTFLTI-LISASLAVPTTLYPQPARaslntasiaassastsCLEYKVVGTCFWLFCTY  59
            +K+++L++ LI++++ V ++L   +           ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNHDGQTPWTE------------------LQALNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGNTGYYCKTQTTPFMPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C++ +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALTPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEAL PG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VSRTAQPHIYFPAAKTGGAGEWPPGPV-EEGQARTHKWQILYPQMSNTCSVFPNGGQTDT  276
            ++RT Q H+Y P +   +AG WPP PV E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

128) MHH_c22740 in NC_021082


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  242 bits (903),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 217/334 (65%), Gaps = 43/334 (12%)

Query  1    MKKTFLTI-LISASLAVPTTLYPQPARaslntasiaassastsCLEYKVVGTCFWLFCTY  59
            +K+++L++ LI++++ V ++L   +           ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNHDGQTPWTE------------------LQALNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGNTGYYCKTQTTPFMPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C++ +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALTPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEAL PG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VSRTAQPHIYFPAAKTGGAGEWPPGPV-EEGQARTHKWQILYPQMSNTCSVFPNGGQTDT  276
            ++RT Q H+Y P +   +AG WPP PV E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

129) Pmu_02990 in NC_016808


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  242 bits (903),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 217/334 (65%), Gaps = 43/334 (12%)

Query  1    MKKTFLTI-LISASLAVPTTLYPQPARaslntasiaassastsCLEYKVVGTCFWLFCTY  59
            +K+++L++ LI++++ V ++L   +           ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNHDGQTPWTE------------------LQALNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGNTGYYCKTQTTPFMPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C++ +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALTPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEAL PG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VSRTAQPHIYFPAAKTGGAGEWPPGPV-EEGQARTHKWQILYPQMSNTCSVFPNGGQTDT  276
            ++RT Q H+Y P +   +AG WPP PV E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

130) UMN179_00323 in NC_015460


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  241 bits (899),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 143/304 (48%), Positives = 206/304 (68%), Gaps = 29/304 (9%)

Query  25   NTAQIMMSSASPSCVEYRVVGICYWLYCGWGGCRVRTSTKVRHYLPEQVVSSYNHGGQNP  84
            NTA I+ SS SPSC+  R+ GICYWL C   GC V+TS KV+H++PE VVS+Y+ +G NP
Sbjct  27   NTASIVASSISPSCISWRISGICYWLMCTPFGCTVKTSIKVHHFIPEAVVSTYQASGGNP  86

Query  85   WSEMNMLGQ----------------GIKAGPENDRPQTKQYSQLTFKNVDVIGHPGGEIN  128
            W+EM++++Q                +  +G ++++    + S++ FK  D IGHP+  I 
Sbjct  87   WTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQKFPGTRKSNVRFKYADAIGHPSTSII  146

Query  129  RVLSSMGYFCNTQTTAFKPHFLSGLDVIGWQNGMPEALYPEALTPGMREVGNLG--DMWG  186
                + GY CN+ +T++ P FLS LD ++W+ G+PE++YPEAL PG RE+G+ +  ++WG
Sbjct  147  GGQIP-GYSCNSAATPLVPYFLSTLDTLAWRTGVPESVYPEALIPGRREIGSTSAQNIWG  205

Query  187  NIYPRAGAITQVHPYKAAAVTAQRAADIISRTGQPHVYLPAAQKARPSRGYWPPPPVEEG  246
            N+YPR+G +TQ + YK++A+ AQR ADII+RT Q HVY P +  + PS GYWPP PV E 
Sbjct  206  NLYPRSGFVTQQDDYKSGAIVAQRVADIITRTNQIHVYKPLT--GNPSAGYWPPEPVKEN  263

Query  247  K-IKTHKWQMLYPKMERTCAIFPDRDALNTYQDKLSTQQDYAWALWRPYSCCKRRGQTFL  305
               + HKWQ L P +  +C++FPD        +K++ + +YAW+LW+PYSCCKRRGQTFL
Sbjct  264  TGTQNHKWQQLSPTLSMSCSVFPD-------TGKIAENGNYAWTLWQPYSCCKRRGQTFL  316

Query  306  YSTD  309
            YSTD
Sbjct  317  YSTD  320

131) PPS_2340 in NC_015733


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  239 bits (893),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 133/264 (51%), Positives = 185/264 (71%), Gaps = 16/264 (6%)

Query  1    MRTSPKVRHFIPELVVSSYSDTGNNPWGEMSGLSAP------------TPLSQGGGNLIT  48
            ++TS KV+HFIPE VVS+Y  +G NPW EMS +S              + L+ GGGN   
Sbjct  61   VKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGGNQEQ  120

Query  49   PSP-QRNNLPRFKNVDGIGHPGGAALTALARSFGYACPSGAVPLAPYYLSTLDPLAWRHA  107
              P  R++  RFK  D+IGHP+ + + +     GY+C S+A PL PY+LSTLD LAWR +
Sbjct  121  KFPGTRKSNVRFKYADAIGHPSTSIIGGQIP--GYSCNSAATPLVPYFLSTLDTLAWRTG  178

Query  108  IPESVYPQALVPGVREIGSQALGNMWGSVYPRQGFLVQPDDFKAAAVMAQRASDFITRVG  167
            +PESVYP+AL+PG REIGS +  N+WG++YPR GF+ Q DD+K++A++AQR +D+ITR  
Sbjct  179  VPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADIITRTN  238

Query  168  QPHVYLPLQPMPSPGYWPPQPVMENN-LNNHRWQLLAPMMQSTCAIFPSATVQSAEGAYA  226
            Q HVY PL   PS+GYWPP+PV EN   +NH+WQ L+P +  +C++FP +   + +G YA
Sbjct  239  QIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTGKIAENGNYA  298

Query  227  WSLWRPYRCCQRMGQTFLFSIDFD  250
            W+LW+PY CC+R GQTFL+S D++
Sbjct  299  WTLWQPYSCCKRRGQTFLYSTDIN  322

132) F382_13655 in NC_021743


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 213/334 (64%), Gaps = 43/334 (12%)

Query  1    MKRAFFSVLL-SVSLAVPTTLYPQQVKaslntasiaassastsCLDYKVVGTCFWLFCTY  59
            +KRA++SV+L + ++ V ++L    +          ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTE------------------LQSLNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGSTGYYCKSQTTPFIPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C+S +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALIPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEALIPG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VTRTAQPHIYFPAAKKggvge-wppgpveegQARTHKWQMLYPQMSNTCSVFPNGGQTDT  276
            +TRT Q H+Y P + + + G   P    E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

133) J451_13890 in NC_021739


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 213/334 (64%), Gaps = 43/334 (12%)

Query  1    MKRAFFSVLL-SVSLAVPTTLYPQQVKaslntasiaassastsCLDYKVVGTCFWLFCTY  59
            +KRA++SV+L + ++ V ++L    +          ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTE------------------LQSLNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGSTGYYCKSQTTPFIPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C+S +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALIPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEALIPG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VTRTAQPHIYFPAAKKggvge-wppgpveegQARTHKWQMLYPQMSNTCSVFPNGGQTDT  276
            +TRT Q H+Y P + + + G   P    E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

134) MHH_c22380 in NC_021082


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 213/334 (64%), Gaps = 43/334 (12%)

Query  1    MKRAFFSVLL-SVSLAVPTTLYPQQVKaslntasiaassastsCLDYKVVGTCFWLFCTY  59
            +KRA++SV+L + ++ V ++L    +          ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTE------------------LQSLNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGSTGYYCKSQTTPFIPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C+S +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALIPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEALIPG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VTRTAQPHIYFPAAKKggvge-wppgpveegQARTHKWQMLYPQMSNTCSVFPNGGQTDT  276
            +TRT Q H+Y P + + + G   P    E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

135) D648_11220 in NC_020834


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 213/334 (64%), Gaps = 43/334 (12%)

Query  1    MKRAFFSVLL-SVSLAVPTTLYPQQVKaslntasiaassastsCLDYKVVGTCFWLFCTY  59
            +KRA++SV+L + ++ V ++L    +          ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTE------------------LQSLNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGSTGYYCKSQTTPFIPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C+S +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALIPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEALIPG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VTRTAQPHIYFPAAKKggvge-wppgpveegQARTHKWQMLYPQMSNTCSVFPNGGQTDT  276
            +TRT Q H+Y P + + + G   P    E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

136) D650_16340 in NC_020833


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 213/334 (64%), Gaps = 43/334 (12%)

Query  1    MKRAFFSVLL-SVSLAVPTTLYPQQVKaslntasiaassastsCLDYKVVGTCFWLFCTY  59
            +KRA++SV+L + ++ V ++L    +          ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTE------------------LQSLNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGSTGYYCKSQTTPFIPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C+S +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALIPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEALIPG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VTRTAQPHIYFPAAKKggvge-wppgpveegQARTHKWQMLYPQMSNTCSVFPNGGQTDT  276
            +TRT Q H+Y P + + + G   P    E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320

137) N220_08220 in NC_021883


> NC_003198_P9|53|G46|16763044|NP_458661.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|44336..45304|STY4576|-|hypothetical 
protein
Length=322

 Score =  229 bits (852),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 152/334 (46%), Positives = 213/334 (64%), Gaps = 43/334 (12%)

Query  1    MKRAFFSVLL-SVSLAVPTTLYPQQVKaslntasiaassastsCLDYKVVGTCFWLFCTY  59
            +KRA++SV+L + ++ V ++L    +          ASS S SC+  ++ G C+WL CT 
Sbjct  6    LKRALLSVMLITGGMEVQAALNTASI---------VASSISPSCISWRISGICYWLMCTP  56

Query  60   FGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTE------------------LQSLNPGVK  101
            FGC V+TS K+ H++PE VVS+Y+  G  PWTE                  L +L +G  
Sbjct  57   FGCTVKTSIKVHHFIPEAVVSTYQASGGNPWTEMSLVSQTAGGVENAVTGALSGLAAGGG  116

Query  102  GGEYRSPQRQYSQLTFKNADAFGHPQGAI--GQLLGSTGYYCKSQTTPFIPYFLSGLDFF  159
              E + P  + S++ FK ADA+GHP  +I  GQ+    GY C+S +TP++PYFLS LD +
Sbjct  117  NQEQKFPGTRKSNVRFKYADAIGHPSTSIIGGQI---PGYSCNSAATPLVPYFLSTLDTL  173

Query  160  AWRENMPEMFYPEALIPGMREVGRVG--DSWGNIYPRSGWVTQAHDYKASATIVQRVADI  217
            AWR  +PE  YPEALIPG RE+G  +  + WGN+YPRSG VTQ +DYK++A + QRVADI
Sbjct  174  AWRTGVPESVYPEALIPGRREIGSTSAQNIWGNLYPRSGFVTQQDDYKSGAIVAQRVADI  233

Query  218  VTRTAQPHIYFPAAKKggvge-wppgpveegQARTHKWQMLYPQMSNTCSVFPNGGQTDT  276
            +TRT Q H+Y P + + + G   P    E+  ++ HKWQ L P +S +CSVFP+ G    
Sbjct  234  ITRTNQIHVYKPLTGNPSAGYWPPEPVKENTGTQNHKWQQLSPTLSMSCSVFPDTG----  289

Query  277  YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSID  310
               +I+++G+YAW+LW+PYSCCKRRGQTFLYS D
Sbjct  290  ---KIAENGNYAWTLWQPYSCCKRRGQTFLYSTD  320