Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
holin |
NC_017333 (Staphylococcus aureus ST398) |
1e-49 |
96 |
|
phage-related holin |
NC_017337 (Staphylococcus aureus ED133) |
3e-44 |
100 |
|
phage-related holin |
NC_007622 (Staphylococcus aureus RF122) |
1e-43 |
98 |
|
holin, phage phi LC3 family |
NC_017351 (Staphylococcus aureus 11819-97) |
1e-42 |
97 |
|
holin |
NC_021670 (Staphylococcus aureus Bmb9393) |
1e-42 |
97 |
|
holin |
NC_017349 (Staphylococcus aureus LGA251) |
1e-42 |
95 |
|
holin, phage phi LC3 family |
NC_021554 (Staphylococcus aureus CA-347) |
2e-42 |
96 |
|
phage phi LC3 family holin |
NC_009632 (Staphylococcus aureus JH1) |
2e-42 |
96 |
|
phage phi LC3 family holin |
NC_009632 (Staphylococcus aureus JH1) |
2e-42 |
96 |
|
phage phi LC3 family holin |
NC_009487 (Staphylococcus aureus JH9) |
2e-42 |
96 |
|
phage phi LC3 family holin |
NC_009487 (Staphylococcus aureus JH9) |
2e-42 |
96 |
|
phage holin |
NC_017341 (Staphylococcus aureus JKD6008) |
2e-42 |
96 |
|
holin |
NC_017331 (Staphylococcus aureus TW20) |
2e-42 |
96 |
|
hypothetical protein |
NC_009782 (Staphylococcus aureus Mu3) |
3e-42 |
96 |
|
holin |
NC_002758 (Staphylococcus aureus Mu50) |
3e-42 |
96 |
|
holin |
NC_007795 (Staphylococcus aureus NCTC 8325) |
4e-42 |
96 |
|
phage holin |
NC_009641 (Staphylococcus aureus Newman) |
5e-42 |
95 |
|
holin |
NC_013893 (Staphylococcus lugdunensis HKU09-01) |
2e-14 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_017337_P3' AND ph.id_pai_orf='52' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc