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Homologs of YE3500 gene of NC_008800_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YE3500
( YP_001007661.1 )

putative type IV prepilin

NC_008800
(Yersinia enterocolitica 8081)

7e-66

100

2) pilS
( YP_001402683.1 )

type IV pilus biogenesis protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-63

3) O3K_25692
( YP_006781736.1 )

type IV prepilin cluster, prepilin

NC_018659
(Escherichia coli 2011C-3493)

4e-46

4) EKO11_4731
( YP_005280348.1 )

PilS domain-containing protein

NC_016904
(Escherichia coli KO11FL)

4e-46

5) pilS
( YP_006137024.1 )

IncI1 conjugal transfer prepilin protein PilS

NC_017642
(Escherichia coli UMNK88)

4e-46

6) pilS
( YP_006127340.1 )

Type IVB thin major prepilin

NC_017637
(Escherichia coli W)

4e-46

7) WFL_23655
( YP_006176109.1 )

type IV prepilin cluster; prepilin

NC_017665
(Escherichia coli W)

4e-46

8) pilS
( NP_928385.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

4e-46

9) SEEH1578_00600
( YP_008248856.1 )

type IV pepilin

NC_021811
(Salmonella enterica 41578)

3e-44

10) CFSAN002069_23040
( YP_008253311.1 )

hypothetical protein

NC_021813
(Salmonella enterica CFSAN002069)

3e-44

11) pilS
( YP_006203609.1 )

typeIV prepilin

NC_017718
(Salmonella enterica SL1344)

3e-44

12) SeHA_A0112
( YP_002043947.1 )

typeIV prepilin

NC_011081
(Salmonella enterica SL476)

3e-44

13) pilS
( YP_006200933.1 )

typeIV prepilin

NC_017675
(Salmonella enterica ST4/74)

3e-44

14) ECSE_P1-0110
( YP_002296135.1 )

type IV prepilin PilS

NC_011419
(Escherichia coli SE11)

7e-44

15) EJP617_06730
( YP_005817241.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

1e-42

16) SPAB_05362
( YP_001591468.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-40

17) ECL_00421
( YP_003610936.1 )

type IV prepilin

NC_014121
(Enterobacter cloacae ATCC 13047)

6e-40

18) Ser39006_1487
( YP_008521869.1 )

PilS domain-containing protein

NC_022268
(Serratia sp. ATCC 39006)

5e-32

19) PAGR_g3868
( YP_005994576.1 )

putative conjugative transfer outer membrane protein PilS

NC_017554
(Pantoea ananatis PA13)

2e-30

20) pilS
( YP_005197432.1 )

type IV prepilin PilS

NC_016816
(Pantoea ananatis LMG 5342)

7e-27

21) pilS
( YP_002924034.1 )

PilS type IV pilus prepilin

NC_012751
(Candidatus Hamiltonella defensa T5A)

9e-27

22) pilS
( NP_458635.1 )

prepilin

NC_003198
(Salmonella enterica CT18)

4e-22

23) STBHUCCB_44980
( YP_005219918.1 )

Prepilin

NC_016832
(Salmonella enterica P-stx-12)

4e-22

24) pilS
( NP_807846.1 )

prepilin

NC_004631
(Salmonella enterica Ty2)

4e-22

25) TY21A_21625
( YP_007928485.1 )

prepilin

NC_021176
(Salmonella enterica Ty21a)

5e-22

26) pilS
( YP_005804229.1 )

prepilin

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-21

27) pilS
( YP_002650206.1 )

type IV prepilin

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-21

• Sequence Alignments

1) YE3500 in NC_008800


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  243 bits (906),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 195/195 (100%), Positives = 195/195 (100%), Gaps = 0/195 (0%)

Query  1    MLFHAVARKRPHRGWGILESggvalvviivitvvlgglYMLWNRKDIALESANVQSIITS  60
            MLFHAVARKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITS
Sbjct  1    MLFHAVARKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITS  60

Query  61   TQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPIT  120
            TQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPIT
Sbjct  61   TQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPIT  120

Query  121  ANGFNHGFTVIYPKVPQYACiaittslstggsisgitinstAYSDGNVTAENAGTACVKD  180
            ANGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKD
Sbjct  121  ANGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKD  180

Query  181  TGRSGMNTLTFTVNG  195
            TGRSGMNTLTFTVNG
Sbjct  181  TGRSGMNTLTFTVNG  195

2) pilS in NC_009708


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  233 bits (869),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 160/195 (83%), Positives = 180/195 (93%), Gaps = 0/195 (0%)

Query  1    MSLPVASRKQPHSGWGILESggvalvvivviavvlggiYTLWNRKDIALESANVQSIITS  60
            M +   +RK+PH GWGILESGGVALVVI+VI+VVLGG+Y LWNRKDIALESANVQSIITS
Sbjct  1    MLFHAVARKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITS  60

Query  61   TQGLLKGRNGYSFASGTTMTGILIQVGGVPKNMMTKGNVTASTATLWNTWGGQVIVAPVT  120
            TQGLLK+RNGY+++SG  MTG+LIQVGGVPKNMMTKGNVT++TATLWNTWGGQV+VAP+T
Sbjct  61   TQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPIT  120

Query  121  ANGFNHGFTLTYQKVPQSVCIAITTRLSAGGSMSGITINSTVYSDGNITAENAGTTCVKD  180
            ANGFNHGFT+ Y KVPQ  CIAITT LS+GGS+SGITINST YSDGN+TAENAGT+CVKD
Sbjct  121  ANGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKD  180

Query  181  TGRIGMNTLTFTVNG  195
            TGR GMNTLTFTVNG
Sbjct  181  TGRSGMNTLTFTVNG  195

3) EKO11_4731 in NC_016904


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  177 bits (656),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 108/184 (59%), Positives = 149/184 (81%), Gaps = 0/184 (0%)

Query  21   DKGWGIMEQGaialvviivlalvFGGLYMLRSRTGVANESSNIQTIITSTQGLLKGSDGY  80
            ++GWGI+E G++ALVVIIV+++V+GGLYML++R ++A ES+N+Q+IITSTQGLLK+ +GY
Sbjct  12   HRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKSRNGY  71

Query  81   TFTSGAKMTGALIQMGGVPKTMTVRGTPSSGTATLYNSWGGAVTVAPASTSGFNNGFTVT  140
             +TSG  MTG LIQ+GGVPK M  +G  ++GTATL N+WGG V VAP +++GFN+GFTV 
Sbjct  72   NYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNHGFTVI  131

Query  141  YEKVPQDACIQIATQISRTGLTNGITLNSTTHNDGKVTTEEASAQCTADNGSTGTNKLIF  200
            Y KVPQ ACI I+T +S  G  +GIT+NST+ +DG+VT+E+A++ C  D G +G N L F
Sbjct  132  YPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGMNTLTF  191

Query  201  TING  204
            T+NG
Sbjct  192  TVNG  195

4) O3K_25692 in NC_018659


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  177 bits (656),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 108/184 (59%), Positives = 149/184 (81%), Gaps = 0/184 (0%)

Query  21   DKGWGIMEQGaialvviivlalvFGGLYMLRSRTGVANESSNIQTIITSTQGLLKGSDGY  80
            ++GWGI+E G++ALVVIIV+++V+GGLYML++R ++A ES+N+Q+IITSTQGLLK+ +GY
Sbjct  12   HRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKSRNGY  71

Query  81   TFTSGTKMTGALIQMGGVPKTMTVRGTPSSGTATLYNSWGGAVTVAPASTSGFNNGFTVT  140
             +TSG  MTG LIQ+GGVPK M  +G  ++GTATL N+WGG V VAP +++GFN+GFTV 
Sbjct  72   NYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNHGFTVI  131

Query  141  YEKVPQDACIQIATQISRTGLTNGITLNSTTHNDGKVTTEEASAQCTADNGSTGTNKLIF  200
            Y KVPQ ACI I+T +S  G  +GIT+NST+ +DG+VT+E+A++ C  D G +G N L F
Sbjct  132  YPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGMNTLTF  191

Query  201  TING  204
            T+NG
Sbjct  192  TVNG  195

5) pilS in NC_017642


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  177 bits (656),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 108/184 (59%), Positives = 149/184 (81%), Gaps = 0/184 (0%)

Query  21   DKGWGIMEQGaialvviivlalvFGGLYMLRSRTGVANESSNIQTIITSTQGLLKGSDGY  80
            ++GWGI+E G++ALVVIIV+++V+GGLYML++R ++A ES+N+Q+IITSTQGLLK+ +GY
Sbjct  12   HRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKSRNGY  71

Query  81   TFTSGAKMTGALIQMGGVPKTMTVRGTPSSGTATLYNSWGGAVTVAPASTSGFNNGFTVT  140
             +TSG  MTG LIQ+GGVPK M  +G  ++GTATL N+WGG V VAP +++GFN+GFTV 
Sbjct  72   NYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNHGFTVI  131

Query  141  YEKVPQDACIQIATQISRTGLTNGITLNSTTHNDGKVTTEEASAQCTADNGSTGTNKLIF  200
            Y KVPQ ACI I+T +S  G  +GIT+NST+ +DG+VT+E+A++ C  D G +G N L F
Sbjct  132  YPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGMNTLTF  191

Query  201  TING  204
            T+NG
Sbjct  192  TVNG  195

6) pilS in NC_017637


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  177 bits (656),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 108/184 (59%), Positives = 149/184 (81%), Gaps = 0/184 (0%)

Query  21   DKGWGIMEQGaialvviivlalvFGGLYMLRSRTGVANESSNIQTIITSTQGLLKGSDGY  80
            ++GWGI+E G++ALVVIIV+++V+GGLYML++R ++A ES+N+Q+IITSTQGLLK+ +GY
Sbjct  12   HRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKSRNGY  71

Query  81   TFTSGAKMTGALIQMGGVPKTMTVRGTPSSGTATLYNSWGGAVTVAPASTSGFNNGFTVT  140
             +TSG  MTG LIQ+GGVPK M  +G  ++GTATL N+WGG V VAP +++GFN+GFTV 
Sbjct  72   NYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNHGFTVI  131

Query  141  YEKVPQDACIQIATQISRTGLTNGITLNSTTHNDGKVTTEEASAQCTADNGSTGTNKLIF  200
            Y KVPQ ACI I+T +S  G  +GIT+NST+ +DG+VT+E+A++ C  D G +G N L F
Sbjct  132  YPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGMNTLTF  191

Query  201  TING  204
            T+NG
Sbjct  192  TVNG  195

7) WFL_23655 in NC_017665


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  177 bits (656),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 108/184 (59%), Positives = 149/184 (81%), Gaps = 0/184 (0%)

Query  21   DKGWGIMEQGaialvviivlalvFGGLYMLRSRTGVANESSNIQTIITSTQGLLKGSDGY  80
            ++GWGI+E G++ALVVIIV+++V+GGLYML++R ++A ES+N+Q+IITSTQGLLK+ +GY
Sbjct  12   HRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKSRNGY  71

Query  81   TFTSGAKMTGALIQMGGVPKTMTVRGTPSSGTATLYNSWGGAVTVAPASTSGFNNGFTVT  140
             +TSG  MTG LIQ+GGVPK M  +G  ++GTATL N+WGG V VAP +++GFN+GFTV 
Sbjct  72   NYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNHGFTVI  131

Query  141  YEKVPQDACIQIATQISRTGLTNGITLNSTTHNDGKVTTEEASAQCTADNGSTGTNKLIF  200
            Y KVPQ ACI I+T +S  G  +GIT+NST+ +DG+VT+E+A++ C  D G +G N L F
Sbjct  132  YPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGMNTLTF  191

Query  201  TING  204
            T+NG
Sbjct  192  TVNG  195

8) pilS in NC_005126


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  177 bits (657),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 113/197 (58%), Positives = 160/197 (82%), Gaps = 2/197 (1%)

Query  4    MMIQKQDRMARPPERGWAILENgavalvviavitvvlggiYMLYDRKDAVVETTNLQTII  63
            M+++   R  + P+RGW+ILE+G+VALVVI VITVVLGG+YML +RKD  +E++N+Q+II
Sbjct  1    MLFHAVAR--KRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSII  58

Query  64   SSTQGLMKGSGGYEFSHADKMTGVLIQLGGVPKSMTVRGDTTVGNATLWNTWGGQVKVGP  123
            +STQGL+K+  GY+++ +  MTG+LIQ+GGVPK+M  +G+ T G ATLWNTWGGQV V+P
Sbjct  59   TSTQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAP  118

Query  124  SSTGGFNNGFTVTYERVPQSACVSLATGMSRGGSASEITINNTHHADGKVTLESASTACT  183
             ++ GFN+GFTV Y +VPQ AC++++T++S GGS S ITIN+T  +DG+VT E+A+TAC 
Sbjct  119  ITANGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACV  178

Query  184  RNNGRTGTNKLIFTING  200
            ++ GR+G N L FT+NG
Sbjct  179  KDTGRSGMNTLTFTVNG  195

9) SEEH1578_00600 in NC_021811


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 107/189 (57%), Positives = 147/189 (78%), Gaps = 1/189 (0%)

Query  16   KNEPHDKGWAILEQGTIAlvvlfvivvvlGSLYALRTRANVATETANIQTIITSAQSLLK  75
            ++ PH +GW+ILE G +ALVV++VI VVLG+LY L+ R ++A E+AN+Q+IITS+Q+LLK
Sbjct  8    RKRPH-RGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLK  66

Query  76   GSDGYTFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWGGAVTVAPASTSGFNN  135
            + +GY +TS+  MTG LIQ+G +P  M  +G+ T+GTATL N+WGG V VAP +++GFN+
Sbjct  67   SRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNH  126

Query  136  GFTVTYDKVPQDACIQIATRISKTGLTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGT  195
            GFTV Y KVPQ ACI I+T +S  G  +GIT+NSTA SDG+VT+E+A+T C  D G +G 
Sbjct  127  GFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGM  186

Query  196  NKLIFTING  204
            N L FT+NG
Sbjct  187  NTLTFTVNG  195

10) CFSAN002069_23040 in NC_021813


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 107/189 (57%), Positives = 147/189 (78%), Gaps = 1/189 (0%)

Query  16   KNEPHDKGWAILEQGTIAlvvlfvivvvlGSLYALRTRANVATETANIQTIITSAQSLLK  75
            ++ PH +GW+ILE G +ALVV++VI VVLG+LY L+ R ++A E+AN+Q+IITS+Q+LLK
Sbjct  8    RKRPH-RGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLK  66

Query  76   GSDGYTFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWGGAVTVAPASTSGFNN  135
            + +GY +TS+  MTG LIQ+G +P  M  +G+ T+GTATL N+WGG V VAP +++GFN+
Sbjct  67   SRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNH  126

Query  136  GFTVTYDKVPQDACIQIATRISKTGLTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGT  195
            GFTV Y KVPQ ACI I+T +S  G  +GIT+NSTA SDG+VT+E+A+T C  D G +G 
Sbjct  127  GFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGM  186

Query  196  NKLIFTING  204
            N L FT+NG
Sbjct  187  NTLTFTVNG  195

11) SeHA_A0112 in NC_011081


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 107/189 (57%), Positives = 147/189 (78%), Gaps = 1/189 (0%)

Query  16   KNEPHDKGWAILEQGTIAlvvlfvivvvlGSLYALRTRANVATETANIQTIITSAQSLLK  75
            ++ PH +GW+ILE G +ALVV++VI VVLG+LY L+ R ++A E+AN+Q+IITS+Q+LLK
Sbjct  8    RKRPH-RGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLK  66

Query  76   GSDGYTFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWGGAVTVAPASTSGFNN  135
            + +GY +TS+  MTG LIQ+G +P  M  +G+ T+GTATL N+WGG V VAP +++GFN+
Sbjct  67   SRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNH  126

Query  136  GFTVTYDKVPQDACIQIATRISKTGLTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGT  195
            GFTV Y KVPQ ACI I+T +S  G  +GIT+NSTA SDG+VT+E+A+T C  D G +G 
Sbjct  127  GFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGM  186

Query  196  NKLIFTING  204
            N L FT+NG
Sbjct  187  NTLTFTVNG  195

12) pilS in NC_017718


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 107/189 (57%), Positives = 147/189 (78%), Gaps = 1/189 (0%)

Query  16   KNEPHDKGWAILEQGTIAlvvlfvivvvlGSLYALRTRANVATETANIQTIITSAQSLLK  75
            ++ PH +GW+ILE G +ALVV++VI VVLG+LY L+ R ++A E+AN+Q+IITS+Q+LLK
Sbjct  8    RKRPH-RGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLK  66

Query  76   GSDGYTFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWGGAVTVAPASTSGFNN  135
            + +GY +TS+  MTG LIQ+G +P  M  +G+ T+GTATL N+WGG V VAP +++GFN+
Sbjct  67   SRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNH  126

Query  136  GFTVTYDKVPQDACIQIATRISKTGLTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGT  195
            GFTV Y KVPQ ACI I+T +S  G  +GIT+NSTA SDG+VT+E+A+T C  D G +G 
Sbjct  127  GFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGM  186

Query  196  NKLIFTING  204
            N L FT+NG
Sbjct  187  NTLTFTVNG  195

13) pilS in NC_017675


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  171 bits (632),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 107/189 (57%), Positives = 147/189 (78%), Gaps = 1/189 (0%)

Query  16   KNEPHDKGWAILEQGTIAlvvlfvivvvlGSLYALRTRANVATETANIQTIITSAQSLLK  75
            ++ PH +GW+ILE G +ALVV++VI VVLG+LY L+ R ++A E+AN+Q+IITS+Q+LLK
Sbjct  8    RKRPH-RGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLK  66

Query  76   GSDGYTFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWGGAVTVAPASTSGFNN  135
            + +GY +TS+  MTG LIQ+G +P  M  +G+ T+GTATL N+WGG V VAP +++GFN+
Sbjct  67   SRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNH  126

Query  136  GFTVTYDKVPQDACIQIATRISKTGLTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGT  195
            GFTV Y KVPQ ACI I+T +S  G  +GIT+NSTA SDG+VT+E+A+T C  D G +G 
Sbjct  127  GFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGM  186

Query  196  NKLIFTING  204
            N L FT+NG
Sbjct  187  NTLTFTVNG  195

14) ECSE_P1-0110 in NC_011419


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  170 bits (628),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 107/189 (57%), Positives = 146/189 (78%), Gaps = 1/189 (0%)

Query  16   KNEPHDKGWAILEQATIAlvvlfvivvvlGSLYALRTRANVATETANIQTIITSTQSLLK  75
            ++ PH +GW+ILE + +ALVV++VI VVLG+LY L+ R ++A E+AN+Q+IITSTQ+LLK
Sbjct  8    RKRPH-RGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLK  66

Query  76   GSDGYTFTSSAKMTGALIQMGVTPSGMTVQGDETSGTATLYNAWGGAVTVAPASTSGFNN  135
            + +GY +TS+  MTG LIQ+G  P  M  +G+ T+GTATL N+WGG V VAP +++GFN+
Sbjct  67   SRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNH  126

Query  136  GFTVTYDKVPQDACIQIATRISKTGLTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGT  195
            GFTV Y KVPQ ACI I+T +S  G  +GIT+NSTA SDG+VT+E+A+T C  D G +G 
Sbjct  127  GFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGM  186

Query  196  NKLIFTING  204
            N L FT+NG
Sbjct  187  NTLTFTVNG  195

15) EJP617_06730 in NC_017445


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  166 bits (613),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 104/195 (54%), Positives = 156/195 (80%), Gaps = 1/195 (0%)

Query  1    MSVQTVDKRQQDRGWGILEHgtigiitlivltvvgAWLWSLWSKKSVAVETSNIQTIVAN  60
            M  ++V +++ +RGWGILE G ++++ +IV+TVV + L  LW++K +A+E++N+Q+I+++
Sbjct  1    MLFHAVARKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITS  60

Query  61   AQ-MLKSNNGYNFTSASTMTGTLIQIGGAPKGMTIQGTASSGSATLWNGYGGQVVLAPVA  119
            +Q +LKS NGYN+TS+  MTG LIQ+GG PK M  +G  ++G+ATLWN  GGQVV+AP++
Sbjct  61   TQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPIT  120

Query  120  SNGFNNGFSVTAQKVPQADCIAITTQFGSAGAFSAITINSTSFSDGVVSAESAGKACSSD  179
            +NGFN+GF+V   KVPQ  CIAITT ++++G++S+ITINST++SDG V+AE+AG AC  D
Sbjct  121  ANGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKD  180

Query  180  SGMTGNNTLVFTHNG  194
            +G +G NTL FT NG
Sbjct  181  TGRSGMNTLTFTVNG  195

16) SPAB_05362 in NC_010102


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  158 bits (583),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 100/189 (53%), Positives = 145/189 (77%), Gaps = 1/189 (0%)

Query  10   QHQPDRGWGILEHGTIAIGTIIVLAIVGALVWSLWGKKSVAVEVSNLQTVVTNAQQLKQA  69
            + +P+RGWGILE G +A+  IIV+++V + +  LW +K +A+E +N+Q+++T++Q L ++
Sbjct  8    RKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKS  67

Query  70   QGGYNFTSGTTMTGTLIQQGGAPKAGWTIQGTASSGTATMWNGYGGQVVLAPVASNGFNN  129
            + GYN+TSG  MTG LIQ GG PK     +G  ++GTAT+WN  GGQVV+AP+++NGFN+
Sbjct  68   RNGYNYTSGMVMTGLLIQVGGVPKNM-MTKGNVTTGTATLWNTWGGQVVVAPITANGFNH  126

Query  130  GFSVTTQKVPQADCISITTQLGSGGAFSAITINSTDYSDGLVSAEEAGKTCSSDSGMTGN  189
            GF+V   KVPQ  CI+ITT L++GG++S+ITINST YSDG V+AE+AG +C  D+G +G 
Sbjct  127  GFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGM  186

Query  190  NTLVFTHNG  198
            NTL FT NG
Sbjct  187  NTLTFTVNG  195

17) ECL_00421 in NC_014121


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 100/192 (53%), Positives = 149/192 (78%), Gaps = 7/192 (3%)

Query  10   QRQPDRGWGILEHGSIALFTVIVICI-VGAL--VWGLSGKKSVAVETSNIQTVVTNAQQL  66
            +++P+RGWGILE G++AL  +IVI + +G+L  +W    +K +A+E++N+Q+++T++Q L
Sbjct  8    RKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWN---RKDIALESANVQSIITSTQGL  64

Query  67   KQTQGGYNFTSGTTMTGTLIQQGGAPKAGWTIQGTASSGTGTMWNSYGGQVVMAPVASNG  126
             +++ GYN+TSG  MTG LIQ GG PK     +G  ++GT+T+WN+ GGQVV+AP+++NG
Sbjct  65   LKSRNGYNYTSGMVMTGLLIQVGGVPKNM-MTKGNVTTGTATLWNTWGGQVVVAPITANG  123

Query  127  FNNGFSVTTQKVPQADCISIATQLGSGGAFSAISINSTDYSDGLVSAEDAGKACTADTGM  186
            FN+GF+V   KVPQ  CI+I+T L++GG++S+I+INST YSDG V+AE+AG AC  DTG 
Sbjct  124  FNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGR  183

Query  187  TGNNTLVFTHNG  198
            +G NTL FT NG
Sbjct  184  SGMNTLTFTVNG  195

18) Ser39006_1487 in NC_022268


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 97/188 (52%), Positives = 149/188 (80%), Gaps = 2/188 (1%)

Query  11   RRQPHRGWGIIENGTLAiliiivivyvvSKLWGLWTQKSVAMETTNYQSLITYVRGNFKG  70
            R++PHRGWGI+E+G +A+++IIVI  V++ L  LW +K +A+E++N QS+IT  +G +K+
Sbjct  8    RKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKS  67

Query  71   PGGYDFTSASTMTGTVIAAGG-AKGMTVQGDVTSGSATMFNTFGGQVILTPVAsngfnng  129
              GY++TS+  MTG +I  GG +K M  +G+VT+G+AT+ NT GGQV+++P+++NGFN+G
Sbjct  68   RNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGFNHG  127

Query  130  fslssAKIPQDACISIAQQMGN-GAYSSVSINSTAHTDGNVTAETAAKECVKDSGGTGQN  188
            F++  +K+PQ ACI+I+  ++  G+ S+++INSTA +DGNVTAE A+  CVKD+G +G N
Sbjct  128  FTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGMN  187

Query  189  TLTFTVNG  196
            TLTFTVNG
Sbjct  188  TLTFTVNG  195

19) PAGR_g3868 in NC_017554


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/195 (47%), Positives = 145/195 (75%), Gaps = 2/195 (1%)

Query  3    FLNTTAGKHPDRGWGFMEQGAIGLLYAIVITVVLGGVWKLFSAKDSTTEVSSLQTMMSNG  62
            ++++ A K+P+RGWG++E G+++L+  IVITVVLGG+  L + KD + E +++Q+++++ 
Sbjct  2    LFHAVARKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITST  61

Query  63   TA-LKGPNGYDFSSGASMTGFLIQKGGAPSGFTVHGTASSGTATLTNSYGGQVVMAPVAN  121
             + LK+ NGY+++SG  MTG+LIQ GG P      G  ++GTATL N+ GGQVV+AP++ 
Sbjct  62   QGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPIT-  120

Query  122  SNGYNNGFSVTTQSVTQAGCIDIatrmasagsssslainsTDFSSGQVSSEAIGQACTAD  181
            +NG+N+GF+V    V Q +CI I+T ++++GS S+++INST +S G+V++E  G AC  D
Sbjct  121  ANGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKD  180

Query  182  SGRTGNNTLVFTHNG  196
            +GR+G NTL FT NG
Sbjct  181  TGRSGMNTLTFTVNG  195

20) pilS in NC_016816


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  113 bits (413),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 79/192 (42%), Positives = 136/192 (71%), Gaps = 2/192 (1%)

Query  5    NNAVKVHPDRGWGFSEQGYIALGYLLVITIVVIAGWKLLHKKDTAVEVTSLQTMLSNGVA  64
            +   + +P+RGWG+ E G +AL  ++VIT+V+ +   L ++KD A+E +++Q+++++  +
Sbjct  4    HAVARKRPHRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQG  63

Query  65   L-KGRNGYDYSSGASMTGTLIKRDLAPSGYTVHGTPSSGTATLTNSYGGQVVIAPVAVNG  123
            L K+RNGY+Y+SG  MTG LI+ +  P      G  ++GTATL N+ GGQVV+AP++ NG
Sbjct  64   LLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANG  123

Query  124  YNNAFSVTTQSLPQSACIDVASGMNSSGTSNTLTINSTDFSDGA-SSETISQACTADSGR  182
            +N++F+V    +PQ ACI ++++++++G+ + +TINST +SDG  ++E  + AC  D+GR
Sbjct  124  FNHGFTVIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGR  183

Query  183  TGNNTIVVTHNG  194
            +G NT+  T NG
Sbjct  184  SGMNTLTFTVNG  195

21) pilS in NC_012751


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score =  113 bits (412),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 77/182 (43%), Positives = 118/182 (65%), Gaps = 3/182 (1%)

Query  24   HRGFLSLEAMGVLAVISFAIVLAVGTVSSLFNKSTLNDEIANVQSLVTQSRGLLKTQGEY  83
            HRG   LE+ GV  V+ + I + +G +  L N+  +  E ANVQS++T ++GLLK++  Y
Sbjct  12   HRGWGILESGGVALVVIIVITVVLGGLYMLWNRKDIALESANVQSIITSTQGLLKSRNGY  71

Query  84   PFSNGAKMTGTLVQFGGVPGNMTINGDKSKGEAKITNGWGGEVMIAPEKVQGSVNNKGFS  143
             +++G  MTG L+Q GGVP NM  +G+ + G A + N WGG+V++AP   +G   N GF+
Sbjct  72   NYTSGMVMTGLLIQVGGVPKNMMTKGNVTTGTATLWNTWGGQVVVAPITANGF--NHGFT  129

Query  144  VTYKNVPQEACSVMATKLSGSAMIQEVSISGS-HNVGGVTAEKAGAQCKPDNGSVGVNTL  202
            V Y +VPQ AC  ++T LS ++ I  ++I+++  + G VTAE+AG+ C  D G  G+NTL
Sbjct  130  VIYPKVPQYACIAITTSLSTGGSISGITINSTAYSDGNVTAENAGTACVKDTGRSGMNTL  189

Query  203  IF  204
             F
Sbjct  190  TF  191

22) pilS in NC_003198


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 115/157 (74%), Gaps = 3/157 (1%)

Query  56   MWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQ-AGAAKGMTVSGDPA  114
            +W +KD + E +N Q++ T+T G++K+ +GY +TSG  MT+ LIQ +G +K M   G+ +
Sbjct  41   LWNRKDIALESANVQSIITSTQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVT  100

Query  115  SGSATLWNSWGGQIVVAPDTAggtgfnngftittnKVPQSACVsistgmsrsggtsgiKI  174
            +G+ATLWN+WGGQ+VVAP TA   GFN+GFT+   KVPQ AC++I+T++S +G+ SGI I
Sbjct  101  TGTATLWNTWGGQVVVAPITA--NGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITI  158

Query  175  NGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG  211
            N+   +D++VTAE A++ C  D GR+G NTL F  NG
Sbjct  159  NSTAYSDGNVTAENAGTACVKDTGRSGMNTLTFTVNG  195

23) STBHUCCB_44980 in NC_016832


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 115/157 (74%), Gaps = 3/157 (1%)

Query  56   MWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQ-AGAAKGMTVSGDPA  114
            +W +KD + E +N Q++ T+T G++K+ +GY +TSG  MT+ LIQ +G +K M   G+ +
Sbjct  41   LWNRKDIALESANVQSIITSTQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVT  100

Query  115  SGSATLWNSWGGQIVVAPDTAggtgfnngftittnKVPQSACVsistgmsrsggtsgiKI  174
            +G+ATLWN+WGGQ+VVAP TA   GFN+GFT+   KVPQ AC++I+T++S +G+ SGI I
Sbjct  101  TGTATLWNTWGGQVVVAPITA--NGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITI  158

Query  175  NGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG  211
            N+   +D++VTAE A++ C  D GR+G NTL F  NG
Sbjct  159  NSTAYSDGNVTAENAGTACVKDTGRSGMNTLTFTVNG  195

24) pilS in NC_004631


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 115/157 (74%), Gaps = 3/157 (1%)

Query  56   MWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQ-AGAAKGMTVSGDPA  114
            +W +KD + E +N Q++ T+T G++K+ +GY +TSG  MT+ LIQ +G +K M   G+ +
Sbjct  41   LWNRKDIALESANVQSIITSTQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVT  100

Query  115  SGSATLWNSWGGQIVVAPDTAggtgfnngftittnKVPQSACVsistgmsrsggtsgiKI  174
            +G+ATLWN+WGGQ+VVAP TA   GFN+GFT+   KVPQ AC++I+T++S +G+ SGI I
Sbjct  101  TGTATLWNTWGGQVVVAPITA--NGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITI  158

Query  175  NGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG  211
            N+   +D++VTAE A++ C  D GR+G NTL F  NG
Sbjct  159  NSTAYSDGNVTAENAGTACVKDTGRSGMNTLTFTVNG  195

25) TY21A_21625 in NC_021176


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score = 97.8 bits (352),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 115/157 (74%), Gaps = 3/157 (1%)

Query  26   MWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQ-AGAAKGMTVSGDPA  84
            +W +KD + E +N Q++ T+T G++K+ +GY +TSG  MT+ LIQ +G +K M   G+ +
Sbjct  41   LWNRKDIALESANVQSIITSTQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVT  100

Query  85   SGSATLWNSWGGQIVVAPDTAggtgfnngftittnKVPQSACVsistgmsrsggtsgiKI  144
            +G+ATLWN+WGGQ+VVAP TA   GFN+GFT+   KVPQ AC++I+T++S +G+ SGI I
Sbjct  101  TGTATLWNTWGGQVVVAPITA--NGFNHGFTVIYPKVPQYACIAITTSLSTGGSISGITI  158

Query  145  NGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG  181
            N+   +D++VTAE A++ C  D GR+G NTL F  NG
Sbjct  159  NSTAYSDGNVTAENAGTACVKDTGRSGMNTLTFTVNG  195

26) pilS in NC_017390


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score = 94.9 bits (341),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 62/154 (41%), Positives = 93/154 (61%), Gaps = 2/154 (1%)

Query  44   FSRNDTNTELSNISELMNNSRTLLKTNGTYNFEGGESMIGALIQFGGVPGNMSIIGDKSS  103
             +R+D   E +N+  ++ +++ LLK+   YN+ +G  M G LIQ GGVP NM   G+ ++
Sbjct  42   WNRKDIALESANVQSIITSTQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTT  101

Query  104  GKAHLQNVWGGAVSVEPAADSAGELTGFHLIYQMVPQEACIAIAQRLSTTSFVHAIRIND  163
            G A L N WGG V V P + ++ +  GF +IY  VPQ ACIAI+  LST + + +I IN 
Sbjct  102  GTATLWNTWGGQVVVAPITANGFN-HGFTVIYPKVPQYACIAITTSLSTGGSISGITINS  160

Query  164  TI-NRGSISAGNLGGQCVADSGEHKGNILSFISD  196
            T  + G+++A N G  CV D+G    N L+F  +
Sbjct  161  TAYSDGNVTAENAGTACVKDTGRSGMNTLTFTVN  194

27) pilS in NC_012214


> NC_008800_P2|52|G49|123443690|YP_001007661.1|Yersinia_enterocolitica_subsp._enterocolitica_8081|-|49070..49657|-|YE3500|putative 
type IV prepilin
Length=195

 Score = 94.9 bits (341),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 62/154 (41%), Positives = 93/154 (61%), Gaps = 2/154 (1%)

Query  44   FSRNDTNTELSNISELMNNSRTLLKTNGTYNFEGGESMIGALIQFGGVPGNMSIIGDKSS  103
             +R+D   E +N+  ++ +++ LLK+   YN+ +G  M G LIQ GGVP NM   G+ ++
Sbjct  42   WNRKDIALESANVQSIITSTQGLLKSRNGYNYTSGMVMTGLLIQVGGVPKNMMTKGNVTT  101

Query  104  GKAHLQNVWGGAVSVEPAADSAGELTGFHLIYQMVPQEACIAIAQRLSTTSFVHAIRIND  163
            G A L N WGG V V P + ++ +  GF +IY  VPQ ACIAI+  LST + + +I IN 
Sbjct  102  GTATLWNTWGGQVVVAPITANGFN-HGFTVIYPKVPQYACIAITTSLSTGGSISGITINS  160

Query  164  TI-NRGSISAGNLGGQCVADSGEHKGNILSFISD  196
            T  + G+++A N G  CV D+G    N L+F  +
Sbjct  161  TAYSDGNVTAENAGTACVKDTGRSGMNTLTFTVN  194