Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
PilM protein |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
1e-62 |
100 |
|
putative type IV pilus operon exported poprotein |
NC_008800 (Yersinia enterocolitica 8081) |
1e-51 |
80 |
|
PilM inner membrane family protein |
NC_022268 (Serratia sp. ATCC 39006) |
3e-38 |
61 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
1e-30 |
47 |
|
type IV pilus operon exported poprotein PilM |
NC_017554 (Pantoea ananatis PA13) |
3e-30 |
49 |
|
putative Type IV pilus exported protein (PilM) |
NC_016816 (Pantoea ananatis LMG 5342) |
8e-30 |
52 |
|
PilM protein |
NC_014121 (Enterobacter cloacae ATCC 13047) |
3e-29 |
52 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
1e-27 |
54 |
|
putative exported protein |
NC_003198 (Salmonella enterica CT18) |
3e-18 |
45 |
|
hypothetical protein |
NC_012125 (Salmonella enterica RKS4594) |
3e-18 |
45 |
|
hypothetical protein |
NC_004631 (Salmonella enterica Ty2) |
3e-18 |
45 |
|
hypothetical protein |
NC_021176 (Salmonella enterica Ty21a) |
3e-18 |
45 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_009708_P1' AND ph.id_pai_orf='51' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc