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Homologs of SH0073 gene of NC_007168_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SH0073
( YP_251988.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

8e-153

100

2) OEOE_0042
( YP_809711.1 )

LacI family transcription regulator

NC_008528
(Oenococcus oeni PSU-1)

2e-53

3) Lbuc_0110
( YP_004397464.1 )

lacI family transcriptional regulator

NC_015428
(Lactobacillus buchneri NRRL B-30929)

3e-53

4) zj316_2p29
( YP_008362793.1 )

Transcriptional regulator, LacI family

NC_021904
(Lactobacillus plantarum ZJ316)

3e-50

• Sequence Alignments

1) SH0073 in NC_007168


> NC_007168_R1|51|G51|70725074|YP_251988.1|Staphylococcus_haemolyticus_JCSC1435|-|53001..53999|-|SH0073|hypothetical 
protein
Length=332

 Score =  533 bits (2010),  Expect = 8e-153, Method: Compositional matrix adjust.
 Identities = 332/332 (100%), Positives = 332/332 (100%), Gaps = 0/332 (0%)

Query  1    MSVTIKDIAKIANKTPSTVSRVLSNAGGYSSKTEKEIKRIAEDLGYNKNLAAEELVKQHG  60
            MSVTIKDIAKIANKTPSTVSRVLSNAGGYSSKTEKEIKRIAEDLGYNKNLAAEELVKQHG
Sbjct  1    MSVTIKDIAKIANKTPSTVSRVLSNAGGYSSKTEKEIKRIAEDLGYNKNLAAEELVKQHG  60

Query  61   KVIGVMMMDATTNFSGDIINGIEKQVTEEGFSAIWVHAGYQDAERQKKALALLFERRVSG  120
            KVIGVMMMDATTNFSGDIINGIEKQVTEEGFSAIWVHAGYQDAERQKKALALLFERRVSG
Sbjct  61   KVIGVMMMDATTNFSGDIINGIEKQVTEEGFSAIWVHAGYQDAERQKKALALLFERRVSG  120

Query  121  IIIISLTLEESNFIYLKNMNIPYIYLSVNPKNNAPFIASNDFQMAYKGTQYLINKGHQKI  180
            IIIISLTLEESNFIYLKNMNIPYIYLSVNPKNNAPFIASNDFQMAYKGTQYLINKGHQKI
Sbjct  121  IIIISLTLEESNFIYLKNMNIPYIYLSVNPKNNAPFIASNDFQMAYKGTQYLINKGHQKI  180

Query  181  AFTGIDFDEKNIGSERIKGYQQALQDYNIKGYKKWIIEGDYSYESGYVSAKNKLTKMNVS  240
            AFTGIDFDEKNIGSERIKGYQQALQDYNIKGYKKWIIEGDYSYESGYVSAKNKLTKMNVS
Sbjct  181  AFTGIDFDEKNIGSERIKGYQQALQDYNIKGYKKWIIEGDYSYESGYVSAKNKLTKMNVS  240

Query  241  ATLAASDEIALGVINGLSLVDISIPKDFSVMSIDGTSISQMYRPRLHCVRQDFFNIGFEG  300
            ATLAASDEIALGVINGLSLVDISIPKDFSVMSIDGTSISQMYRPRLHCVRQDFFNIGFEG
Sbjct  241  ATLAASDEIALGVINGLSLVDISIPKDFSVMSIDGTSISQMYRPRLHCVRQDFFNIGFEG  300

Query  301  AKALINTISNYKPLKSSYIPFSLIEGETIKHI  332
            AKALINTISNYKPLKSSYIPFSLIEGETIKHI
Sbjct  301  AKALINTISNYKPLKSSYIPFSLIEGETIKHI  332

2) OEOE_0042 in NC_008528


> NC_007168_R1|51|G51|70725074|YP_251988.1|Staphylococcus_haemolyticus_JCSC1435|-|53001..53999|-|SH0073|hypothetical 
protein
Length=332

 Score =  202 bits (752),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 138/334 (42%), Positives = 227/334 (68%), Gaps = 8/334 (2%)

Query  1    MSVTIKDVAKAAGVSTATVSRVLSGKDFFYSEKTEKKVKKAIRDLGYRKNTAAVELVTMK  60
            MSVTIKD+AK A  + +TVSRVLS  +  YS KTEK +K+   DLGY KN AA ELV   
Sbjct  1    MSVTIKDIAKIANKTPSTVSRVLSNAGG-YSSKTEKEIKRIAEDLGYNKNLAAEELVKQH  59

Query  61   SKVIAVILPDTKTTFSNSIIEGIQNEAFKIDLSVIILYIGNNDREKQKRALTTVIERSVN  120
            +KVI+V++ D+ T FS  II+GI+++    ++S I +  G +D E+QK+AL+ ++ER V+
Sbjct  60   GKVIGVMMMDATTNFSGDIINGIEKQVTEEGFSAIWVHAGYQDAERQKKALALLFERRVS  119

Query  121  GILLLSSQLEKENQELLNSSNIPYVYVSIAVQSENIRFIASDDFQIGYQAANFLINKGHK  180
            GI+++S  LE  N   L++ NIPY+Y+S+    +N  FIAS+DFQ++Y+++++LINKGH+
Sbjct  120  GIIIISLTLEESNFIYLKNMNIPYIYLSVN-PKNNAPFIASNDFQMAYKGTQYLINKGHQ  178

Query  181  KIGLAALE-PNTFIGRQRINGYLRALNEHSLPSNENWIFSGNYSYDDGVQAMKYYGSDTE  239
            KI++++++  +  IG +RI+GY +AL++ ++ +  +WI+ G+YSY+ G  + K   +  +
Sbjct  179  KIAFTGIDFDEKNIGSERIKGYQQALQDYNIKGYKKWIIEGDYSYESGYVSAKNKLTKMN  238

Query  240  LTAIIGASDLVAIGIINQAKKIGFKVPQQLSVMSIDGTDAVNIVDPNLTSVTQSFYTMGV  299
            ++A ++ASD +A+G+IN    +++ +P+++SVMSIDGT   ++  P L  V Q F+ +G 
Sbjct  239  VSATLAASDEIALGVINGLSLVDISIPKDFSVMSIDGTSISQMYRPRLHCVRQDFFNIGF  298

Query  300  ESMKMLLNP-----ELKSKYTETKIEERQSTGNI  328
            E+ K L+N       LKS Y    + E ++  +I
Sbjct  299  EGAKALINTISNYKPLKSSYIPFSLIEGETIKHI  332

3) Lbuc_0110 in NC_015428


> NC_007168_R1|51|G51|70725074|YP_251988.1|Staphylococcus_haemolyticus_JCSC1435|-|53001..53999|-|SH0073|hypothetical 
protein
Length=332

 Score =  202 bits (750),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 139/331 (42%), Positives = 231/331 (70%), Gaps = 5/331 (1%)

Query  1    MAVTIKDIAKQAGVSTATVSRVLSGQTAFYSEktakkvkktakkLGYQKNTAAVELVTRR  60
            M+VTIKDIAK A  + +TVSRVLS   + YS KT K +K+ A  LGY+KN AA ELV ++
Sbjct  1    MSVTIKDIAKIANKTPSTVSRVLSNAGG-YSSKTEKEIKRIAEDLGYNKNLAAEELVKQH  59

Query  61   SKVIAVILSSTKSNFSDQIINGIQQEARRHDLNVIIVFAGENDSQMERKALETVIERSVM  120
            +KVI+V++  + +NFS++IINGI+++   ++++ I V AG +D++ ++KAL  ++ER V 
Sbjct  60   GKVIGVMMMDATTNFSGDIINGIEKQVTEEGFSAIWVHAGYQDAERQKKALALLFERRVS  119

Query  121  GILLVAVNLNPANEDLLLNANIPFLFLSITIENRGLPFITSDDFQIGYQATKYLIDKGHS  180
            GI+++++ L+ +N   L N NIP+++LS+   N + PFI+S+DFQ++Y++T+YLI+KGH 
Sbjct  120  GIIIISLTLEESNFIYLKNMNIPYIYLSVNPKNNA-PFIASNDFQMAYKGTQYLINKGHQ  178

Query  181  KIGFAAADLDSVT-GQLRLDGYRHALADNGLPLNSGWVLGGDFAYEDGVNAMKQYGRKPE  239
            KI+F++ D+D    G  R+ GY++AL D  +     W++ GD++YE G  + K+   K +
Sbjct  179  KIAFTGIDFDEKNIGSERIKGYQQALQDYNIKGYKKWIIEGDYSYESGYVSAKNKLTKMN  238

Query  240  VTAVIASSDLAAIGVMNQARDYGLKIPADLAVMSIDGTKLCGIVRPQLTSVTQEFLEMGV  299
            V+A +A+SD  A+GV+N     ++ IP D++VMSIDGT +  + RP+L  V Q+F+++G 
Sbjct  239  VSATLAASDEIALGVINGLSLVDISIPKDFSVMSIDGTSISQMYRPRLHCVRQDFFNIGF  298

Query  300  RGMQQIISPPA--KAAKSSFTPFKIIPRQSV  328
             G + +I+  +  K+ KSS+ PF +I  +++
Sbjct  299  EGAKALINTISNYKPLKSSYIPFSLIEGETI  329

4) zj316_2p29 in NC_021904


> NC_007168_R1|51|G51|70725074|YP_251988.1|Staphylococcus_haemolyticus_JCSC1435|-|53001..53999|-|SH0073|hypothetical 
protein
Length=332

 Score =  192 bits (712),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 140/331 (43%), Positives = 231/331 (70%), Gaps = 5/331 (1%)

Query  1    MAVTIKDIAKQAGVSPATVSRVLSGQAAFYSEktakkvkktakkLGYQKNTAAVELVTRR  60
            M+VTIKDIAK A  +P+TVSRVLS  ++ YS KT K +K+ A  LGY+KN AA ELV ++
Sbjct  1    MSVTIKDIAKIANKTPSTVSRVLSNAGG-YSSKTEKEIKRIAEDLGYNKNLAAEELVKQH  59

Query  61   SKVIAVIVSSTKTNFSDQIIDGIQQEAGEHDLNVIILYAGEKDPQMERKALETVIERSVM  120
            +KVI+V++  + TNFS++II+GI+++  E++++ I + AG +D++ ++KAL  ++ER V 
Sbjct  60   GKVIGVMMMDATTNFSGDIINGIEKQVTEEGFSAIWVHAGYQDAERQKKALALLFERRVS  119

Query  121  GIllvavnlnsvnenllvnanIPYQFLSITLKNRKLPFITSDDFQIGYQATKYLIDKGHS  180
            GI+++++ L+  N   L N NIPY +LS+  KN   PFI+S+DFQ++Y++T+YLI+KGH 
Sbjct  120  GIIIISLTLEESNFIYLKNMNIPYIYLSVNPKNNA-PFIASNDFQMAYKGTQYLINKGHQ  178

Query  181  KIGFAAADLDSVT-GQLRLDGYHQAMADNGLQLNSAWVCGGDFAYEDGVNAMKQYGREPE  239
            KI+F++ D+D    G  R+ GY+QA+ D  ++    W+  GD++YE G  + K+     +
Sbjct  179  KIAFTGIDFDEKNIGSERIKGYQQALQDYNIKGYKKWIIEGDYSYESGYVSAKNKLTKMN  238

Query  240  VTAVIASSDLAAIGVMNQAQDYGLKIPADLAVMSVDGTKLCSIVRPQLTSVTQEFFEMGV  299
            V+A +A+SD  A+GV+N     ++ IP D++VMS+DGT +  + RP+L  V Q+FF++G 
Sbjct  239  VSATLAASDEIALGVINGLSLVDISIPKDFSVMSIDGTSISQMYRPRLHCVRQDFFNIGF  298

Query  300  RGMQQIISQPT--KAAKSAFTPFKIIARQSV  328
             G + +I+  +  K+ KS++ PF +I  +++
Sbjct  299  EGAKALINTISNYKPLKSSYIPFSLIEGETI  329