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Homologs of hrpRS gene of DQ168848

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpS
( YP_003883235.1 )

HrpS type III protein secretion system regulatory protein

NC_014500
(Dickeya dadantii 3937)

2e-91

2) Ser39006_2908
( YP_008523290.1 )

sigma54 specific transcriptional regulator, Fis family

NC_022268
(Serratia sp. ATCC 39006)

3e-89

3) Dd1591_1896
( YP_003004225.1 )

sigma54 specific transcriptional regulator, Fis family

NC_012912
(Dickeya zeae Ech1591)

3e-89

4) Dd586_1893
( YP_003333457.1 )

sigma54 specific transcriptional regulator, Fis family

NC_013592
(Dickeya dadantii Ech586)

6e-89

5) PCC21_022790
( YP_006646935.1 )

HrpS

NC_018525
(Pectobacterium carotovorum PCC21)

8e-87

6) hrpS
( YP_050185.1 )

sigma-54-dependent enhancer-binding protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-85

7) PC1_2201
( YP_003017776.1 )

Fis family sigma-54 specific transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

1e-84

8) hrpS
( YP_001906474.1 )

Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

3e-82

9) hrpS
( YP_005818266.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein

NC_017445
(Erwinia sp. Ejp617)

4e-82

10) PSEBR_a5366
( YP_004356874.1 )

Fis family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

1e-81

11) hrpS
( YP_005804080.1 )

Sigma-54-dependent enhancer-binding protein HrpS

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-81

12) hrpS
( YP_002650063.1 )

Hrp/hrc secretion/translocation pathway protein HrpS

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-81

13) hrpS
( YP_005210952.1 )

protein HrpS

NC_016830
(Pseudomonas fluorescens F113)

4e-81

14) hrpR
( NP_791206.1 )

type III transcriptional regulator HrpR

NC_004578
(Pseudomonas syringae DC3000)

7e-81

15) hrpR
( YP_273529.1 )

type III transcriptional regulator HrpR

NC_005773
(Pseudomonas syringae 1448A)

1e-80

16) HrpR
( YP_234282.1 )

type III transcriptional regulator HrpR

NC_007005
(Pseudomonas syringae B728a)

2e-80

17) hrpS
( YP_003539957.1 )

sigma-54-dependent enhancer-binding protein

NC_013971
(Erwinia amylovora ATCC 49946)

5e-80

18) hrpS
( YP_003529897.1 )

sigma-54-dependent enhancer-binding protein HrpS

NC_013961
(Erwinia amylovora CFBP1430)

5e-80

19) rspS
( YP_006322245.1 )

type III secretion system transcriptional regulator RspS

NC_017911
(Pseudomonas fluorescens A506)

3e-79

20) D781_3924
( YP_007346299.1 )

sigma-54 interacting regulator

NC_020064
(Serratia marcescens FGI94)

2e-78

21) Pmen_0032
( YP_001185539.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

3e-77

22) Pmen_0033
( YP_001185540.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

8e-77

23) hrpS
( NP_791207.1 )

type III transcriptional regulator HrpS

NC_004578
(Pseudomonas syringae DC3000)

4e-76

24) HrpS
( YP_234283.1 )

type III transcriptional regulator HrpS

NC_007005
(Pseudomonas syringae B728a)

1e-75

25) hrpS
( YP_273530.1 )

type III transcriptional regulator HrpS

NC_005773
(Pseudomonas syringae 1448A)

3e-71

26) rspR
( YP_002870393.1 )

putative type III secretion system, regulatory protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-70

27) H045_00470
( YP_007395666.1 )

type III secretion system transcriptional regulator RspS

NC_020209
(Pseudomonas poae RE*1-1-14)

3e-64

28) MexAM1_META2p0902
( YP_002967060.1 )

Transcriptional regulatory protein (zraR)

NC_012811
(Methylobacterium extorquens AM1)

7e-48

29) MCA0447
( YP_112977.1 )

sigma-54 dependent DNA-binding response regulator

NC_002977
(Methylococcus capsulatus Bath)

6e-38

30) pspF
( YP_005030260.1 )

DNA-binding transcriptional activator

NC_016617
(Azospirillum brasilense Sp245)

4e-36

31) Hneap_1253
( YP_003263136.1 )

hypothetical protein

NC_013422
(Halothiobacillus neapolitanus c2)

3e-35

32) pspF
( YP_005934229.1 )

Psp operon transcriptional activator PspF

NC_017531
(Pantoea ananatis AJ13355)

3e-35

33) pspF
( YP_005195578.1 )

Psp operon transcriptional activator PspF

NC_016816
(Pantoea ananatis LMG 5342)

3e-35

34) PAGR_g2078
( YP_005992810.1 )

Psp operon transcriptional activator PspF

NC_017554
(Pantoea ananatis PA13)

3e-35

35) Rahaq2_2781
( YP_005200755.1 )

psp operon transcriptional activator PspF

NC_016818
(Rahnella aquatilis CIP 78.65)

2e-34

36) pspF
( YP_002987340.1 )

phage shock protein operon transcriptional activator

NC_012880
(Dickeya dadantii Ech703)

3e-34

37) pspF
( YP_003883405.1 )

DNA-binding transcriptional activator

NC_014500
(Dickeya dadantii 3937)

6e-34

38) pspF
( YP_005402521.1 )

phage shock protein operon transcriptional activator

NC_017047
(Rahnella aquatilis HX2)

6e-34

39) Rahaq_2750
( YP_004213480.1 )

Fis family transcriptional regulator

NC_015061
(Rahnella sp. Y9602)

6e-34

40) Pat9b_2048
( YP_004115918.1 )

Fis family sigma-54 specific transcriptional regulator

NC_014837
(Pantoea sp. At-9b)

7e-34

41) Ser39006_2989
( YP_008523371.1 )

sigma54 specific transcriptional activator, PspF, Fis family

NC_022268
(Serratia sp. ATCC 39006)

1e-33

42) pspF
( YP_003741686.1 )

Psp operon transcriptional activator

NC_014306
(Erwinia billingiae Eb661)

1e-33

43) pspF
( YP_008230561.1 )

transcriptional regulator

NC_021741
(Serratia liquefaciens ATCC 27592)

1e-33

44) D781_2125
( YP_007344583.1 )

psp operon transcriptional activator PspF

NC_020064
(Serratia marcescens FGI94)

3e-33

45) pspF
( YP_008138660.1 )

psp operon transcriptional activator

NC_021591
(Serratia odorifera 4Rx13)

3e-33

46) pspF
( YP_008159502.1 )

transcriptional regulator

NC_021659
(Serratia plymuthica S13)

4e-33

47) SerAS9_2621
( YP_004506004.1 )

Fis family transcriptional regulator

NC_015567
(Serratia plymuthica AS9)

8e-33

48) SerAS12_2622
( YP_004501051.1 )

Fis family sigma-54 specific transcriptional activator PspF

NC_015566
(Serratia sp. AS12)

8e-33

49) SerAS13_2623
( YP_006025465.1 )

Fis family sigma-54 specific transcriptional activator PspF

NC_017573
(Serratia sp. AS13)

8e-33

50) Atc_1480
( YP_004748829.1 )

flagellar regulatory protein fleQ

NC_015850
(Acidithiobacillus caldus SM-1)

1e-32

51) pspF
( YP_007406425.1 )

DNA-binding transcriptional activator

NC_020211
(Serratia marcescens WW4)

1e-32

52) pspF
( YP_003004084.1 )

phage shock protein operon transcriptional activator

NC_012912
(Dickeya zeae Ech1591)

9e-33

53) SpiGrapes_2045
( YP_005062842.1 )

response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains

NC_016633
(Sphaerochaeta pleomorpha Grapes)

4e-32

54) PLES_10441
( YP_002438650.1 )

putative transcriptional regulator

NC_011770
(Pseudomonas aeruginosa LESB58)

1e-31

55) PAM18_1008
( YP_005973597.1 )

putative transcriptional regulator

NC_017548
(Pseudomonas aeruginosa M18)

1e-31

56) NCGM2_5127
( YP_005983333.1 )

transcriptional regulator

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

1e-31

57) M062_20795
( YP_008134566.1 )

Fis family transcriptional regulator

NC_021577
(Pseudomonas aeruginosa RP73)

1e-31

58) PA14_13000
( YP_789185.1 )

transcriptional regulator

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

1e-31

59) PADK2_04665
( YP_006480928.1 )

transcriptional regulator

NC_018080
(Pseudomonas aeruginosa DK2)

8e-32

60) G655_05020
( YP_007707853.1 )

putative transcriptional regulator

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-31

61) PCA10_01930
( YP_008100530.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

4e-30

• Sequence Alignments

1) hrpS in NC_014500


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  328 bits (1230),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 192/309 (63%), Positives = 254/309 (83%), Gaps = 6/309 (1%)

Query  16   ASHESSLTHPSEDIHGSLSSLIHTIAPLNVDIVLEGETGTGKDTLARRIHQLSGCAGPLV  75
             ++ S + H   DI G+L S+I+  APLNVD+VLEGETGTGKDTLARRIHQLSG  GPLV
Sbjct  7    NTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLV  66

Query  76   AVNCAAVPETLAESELFGVVSGAYTGASRSRAGYLETADKGILFLDEIDSMPLTLQAKML  135
            A+NCAAVPE LAESELFGV++GAYTGAS+SRAGY+E++++G L+LDEIDSMPL LQAK+L
Sbjct  67   ALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLL  126

Query  136  RVLESRGIERLGSTQFKPVDMRVIVATQTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRS  195
            RVLE RGIERLGST+F P+++RVIVATQTPL+KLV+EG+FRRDL+FRL+ +KIQLPTLRS
Sbjct  127  RVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRS  186

Query  196  RTEIILPLFERFLLEASARLKRPAPGLSAIIQEQLLMHGWPGNIRELKAAAERWVLGLSP  255
            R + + +LFERF++E++ +  +P P   + + ++LL H WPGNIRELK AAER VLG+S 
Sbjct  187  RLDHLPSLFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMS-  245

Query  256  VPIASDGDVQVMGEDTPLTSLKVRLRRIERFLIQEALQRNDHCIDTVVNELGIPKRTLYH  315
             P+++D D ++ G+      LK  LR++E+ LIQ+ L R+  CI++V++ELGIP+RTLYH
Sbjct  246  -PLGTDEDPNLEGN----IHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYH  300

Query  316  RIKLLNVAA  324
            R+K L++ +
Sbjct  301  RMKSLSINS  309

2) Ser39006_2908 in NC_022268


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  321 bits (1204),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 188/293 (65%), Positives = 244/293 (84%), Gaps = 0/293 (0%)

Query  28   DIHGTLLSLINDIAPLNVDIVLEGETGTGKDTLARRIHKLSGCSGPLVAVNCAAIPESLA  87
            DI GTL S+I   APLNVD+VLEGETGTGKDTLARRIH+LSG  GPLVA+NCAA+PE LA
Sbjct  19   DIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLA  78

Query  88   ESELFGVVSGAYTGANRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLENRGIERLG  147
            ESELFGV++GAYTGA++SRAGY+E++++G L+LDEIDSMPL LQAK+LRVLE RGIERLG
Sbjct  79   ESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLG  138

Query  148  STQFKAVDMRVIVATQTPLSKLVEEGRFRRDLYFRLDTVKIQLPTLRSRIDIILPMFQRF  207
            ST+F ++++RVIVATQTPL KLVEEG+FRRDL+FRL+ +KIQLPTLRSR+D + ++F+RF
Sbjct  139  STRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERF  198

Query  208  TREASARLKRSSPPIPVSVHERLLTHSWQGNIRELKAAAERWVLGLPPLPMVMETSAQHH  267
              E++ +  ++ P    SV +RLL+H W GNIRELK AAER VLG++PL    + + + +
Sbjct  199  VMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGN  258

Query  268  PLLKERLRRIEKFLIQDALTRNGHCIDDVVTELGIPKRTLYHRIKLLNVRSAN  320
              LK  LR++EK LIQD L+R+  CI+ V++ELGIP+RTLYHR+K L++ S++
Sbjct  259  IHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSPE  311

3) Dd1591_1896 in NC_012912


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  321 bits (1203),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 193/312 (62%), Positives = 252/312 (81%), Gaps = 16/312 (5%)

Query  20   FLSTQQSE------DIHGSLASLIHTIAPLNVDIVLEGETGTGKDTLARRIHQLSGCAGP  73
            F++T+ S+      DI G+L S+I+  APLNVD+VLEGETGTGKDTLARRIHQLSG  GP
Sbjct  5    FMNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGP  64

Query  74   LVAVNCAAVPETLAESELFGVVSGAYTGASRSRAGYLETADKGILFLDEIDSMPLTLQAK  133
            LVA+NCAAVPE LAESELFGV++GAYTGAS+SRAGY+E++++G L+LDEIDSMPL LQAK
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  134  MLRVLESRGIERLGSTQFKPVDMRVIVATQTPLQKLVDEGRFRRDLYFRLDTVKIQLPTL  193
            +LRVLE RGIERLGST+F P+++RVIVATQTPL+KLV+EG+FRRDL+FRL+ +KIQLPTL
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  194  RSRTDIILPLFQRFLHDAAARLKLSVPGVSVIMQEQLLMHDWPGNIRELKAAAERWVLGL  253
            RSR D + +LF+RF+ ++A +   ++P     + ++LL H WPGNIRELK AAER VLG+
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGM  244

Query  254  SPVPIVADGDGAESDTPLTS---LKVRLRRIERFLIQEALQRNDHCIDTVVSELGIPKRT  310
            SP+       G++ D  L +   LK  LR++E+ LIQ+ L R+  CI++V+SELGIP+RT
Sbjct  245  SPL-------GTDEDPNLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRT  297

Query  311  LYHRIKLLNVAA  322
            LYHR+K L++ +
Sbjct  298  LYHRMKSLSINS  309

4) Dd586_1893 in NC_013592


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  320 bits (1200),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 189/295 (65%), Positives = 240/295 (82%), Gaps = 4/295 (1%)

Query  28   DIHGPLSSLIHTIAPLHVDIVLEGETGTGKDTLARRIHQLSGCPGPLVAVNCAAVPETLA  87
            DI G L S+I+  APL+VD+VLEGETGTGKDTLARRIHQLSG  GPLVA+NCAAVPE LA
Sbjct  19   DIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLA  78

Query  88   ESELFGVVSGAYTGASRSRAGYLEIADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLG  147
            ESELFGV++GAYTGAS+SRAGY+E +++G L+LDEIDSMPL LQAK+LRVLE RGIERLG
Sbjct  79   ESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLG  138

Query  148  STQFKPVNMRVIVATQTPLHKLVEKGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFQRF  207
            ST+F P+N+RVIVATQTPL+KLVE G+FRRDL+FRL+ +KIQLPTLRSR + + +LF+RF
Sbjct  139  STRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERF  198

Query  208  LHDAAARLKRPVPGVSAMMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPVAADGGKAGN  267
            + ++A +  +P+P   + + ++LL H WPGNIRELK AAER VLG+SP+    D    GN
Sbjct  199  VMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGN  258

Query  268  DTPLTSLKVRLRRIERFLIQEALQRNDHCIDNVVHELGIPKRTLYHRIKLLNVAA  322
                  LK  LR++E+ LIQ+ L R+  CI++V+ ELGIP+RTLYHR+K L++ +
Sbjct  259  ----IHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINS  309

5) PCC21_022790 in NC_018525


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  313 bits (1173),  Expect = 8e-87, Method: Compositional matrix adjust.
 Identities = 185/309 (60%), Positives = 246/309 (80%), Gaps = 2/309 (0%)

Query  38   DYFPPSSGHSTHTADDIHSSLAPIINVIAPLNVDIVLEGETGTGKDTLANRIHQLSRCSG  97
            ++    S++  H   DI ++L ++I   APLNVD+VLEGETGTGKDTLA RIHQLS   G
Sbjct  4    GFMNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREG  63

Query  98   PLVAVNCAAVPENLAESELFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQA  157
            PLVA+NCAAVPE+LAESELFGV++GAYTGA++SRAGY+E++++G L+LDEIDSMP+ LQA
Sbjct  64   PLVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQA  123

Query  158  KMLRVLESRGVKRLGSTQFTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPT  217
            K+LRVLE RG+ RLGST+F P+++RVIVATQTPL +LVE G FRRDL+FRL+ +KIQLPT
Sbjct  124  KLLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPT  183

Query  218  LRSRSDLILPLFQRFSQEAAVRLKMTLPPMTAEIHEQLLTHSWPGNIRELKAAADRWALG  277
            LRSR D + +LF+RF  E+A +    +P   + + ++LL+H WPGNIRELK AA+R  LG
Sbjct  184  LRSRLDHLPSLFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLG  243

Query  278  LSPLA-EIQPLLHPRPLQLKDRLKRIEKFLIQDALRRHDHCIDDVIVELGIPKRTLYHRL  336
            +SPL+ + +P L+   ++LK+ L+++EK LIQD L RH  CI+ VI ELGIP+RTLYHR+
Sbjct  244  MSPLGTDEDPNLEGN-IHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRM  302

Query  337  KVLNVTARE  345
            K L++ + E
Sbjct  303  KSLSINSPE  311

6) hrpS in NC_004547


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  309 bits (1157),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 179/293 (62%), Positives = 237/293 (81%), Gaps = 0/293 (0%)

Query  51   DIHSSLSPIINVIAPLNVDIVLEGETGTGKDTLANRIHQISQCSGPLVAVNCAAVPENLA  110
            DI ++L ++I   APLNVD+VLEGETGTGKDTLA RIHQ+S   GPLVA+NCAAVPE+LA
Sbjct  19   DIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLA  78

Query  111  ESELFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLG  170
            ESELFGV++GAYTGA++SRAGY+E++++G L+LDEIDSMP+ LQAK+LRVLE RG+ RLG
Sbjct  79   ESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLG  138

Query  171  STQFTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRF  230
            ST+F P+++RVIVATQTPL +LVE G FRRDL+FRL+ +KIQLPTLRSR D + +LF+RF
Sbjct  139  STRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERF  198

Query  231  SQEAAVRLRMTLPPMTAEIDEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQQLLHPRP  290
              E+A + +  +P   + + ++LL+H WPGNIRELK AA+R  +G+SPL+  ++      
Sbjct  199  VMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGN  258

Query  291  LQLKDRLKRIEKFLIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNVTVRE  343
            ++LK+ L+++EK LIQD L RH  CI+ VI ELGIP+RTLYHR+K L++   E
Sbjct  259  IHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSPE  311

7) PC1_2201 in NC_012917


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  306 bits (1146),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 181/294 (62%), Positives = 239/294 (82%), Gaps = 2/294 (0%)

Query  49   DIHSSLSPIINVIAPLNVDIVLEGETGTGKDTLANRIHRLSRCSGPLVAVNCAAVPENLA  108
            DI ++L ++I   APLNVD+VLEGETGTGKDTLA RIH+LS   GPLVA+NCAAVPE+LA
Sbjct  19   DIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLA  78

Query  109  ESELFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLG  168
            ESELFGV++GAYTGA++SRAGY+E++++G L+LDEIDSMP+ LQAK+LRVLE RG+ RLG
Sbjct  79   ESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLG  138

Query  169  STQFTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRF  228
            ST+F P+++RVIVATQTPL +LVE G FRRDL+FRL+ +KIQLPTLRSR D + +LF+RF
Sbjct  139  STRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERF  198

Query  229  SQEAAVRLRMTQPPMTAEIYEQLLTHSWPGNIRELKAAADRWAMGLSPLA-EIQPLLHPR  287
              E+A + +   P   + + ++LL+H WPGNIRELK AA+R  +G+SPL+ + +P L+  
Sbjct  199  VMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGN  258

Query  288  PLQLKDRLKRIEKFLIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNVTVRE  341
             ++LK+ L+++EK LIQD L RH  CI+ VI ELGIP+RTLYHR+K L++   E
Sbjct  259  -IHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSPE  311

8) hrpS in NC_010694


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  297 bits (1114),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 177/297 (60%), Positives = 230/297 (78%), Gaps = 1/297 (0%)

Query  24   EEQPIDIHDTLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCSGKLVAVNCAAI  83
            E++ +DI +TL   I+  APL++D+VLEGETGTGKDTLAR+IHQLSG  G LVA+NCAA+
Sbjct  14   EHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAV  73

Query  84   PETLAESELFGINNGAYTGAGQARAGYVEAAHNGILFLDEIDSMPLSLQAKMLRVLENRG  143
            PE LAESELFG+  GAYTGA+++RAGY+EA+HNG L+LDEIDSMPL LQAK+LRVLE RG
Sbjct  74   PEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRG  133

Query  144  VERLGGTRFTPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEIIIP  203
            +ERLG+TRF P+N+RVIVATQTPL  LVE G FRRDL+FRLN + IQL  LR+R++ + +
Sbjct  134  IERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPS  193

Query  204  LFRYFIQQAATTLQCPQREITQEHYECLLSYGWPGNIRELKAAAERFVLGLPPLGFSCHC  263
            LF  F+ ++A   + P  +      + LLS  WPGNIRELK AAERFVLG++PLG   + 
Sbjct  194  LFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDP  253

Query  264  E-DERPRLKEMMRRIEKSLIHDCLLRHGHSIDDAAQELGIPLRTLYHRIKLLNVTTS  319
            + +   +LK  +R++EK+LI+DCL RH   I+    ELGIP RTLYHR+K L++ ++
Sbjct  254  NLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSP  310

9) hrpS in NC_017445


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  297 bits (1112),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 174/297 (59%), Positives = 227/297 (77%), Gaps = 1/297 (0%)

Query  3    EEQPIDIHDTLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAI  62
            E++ +DI +TL   I+  APL++D+VLEGETGTGKDTLAR+IHQLSG  G LVA+NCAA+
Sbjct  14   EHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAV  73

Query  63   PETLAESELFGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRG  122
            PE LAESELFG+  GAYTGA+++RAGY+EA++NG L+LDEIDSMPL LQAK+LRVLE RG
Sbjct  74   PEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRG  133

Query  123  VERLGGTRFTPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIP  182
            +ERLG+TRF P+N+RVIVATQTPL  LVE G FRRDL+FRLN + IQL  LR+R++ + +
Sbjct  134  IERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPS  193

Query  183  LFRSFIQKAASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHC  242
            LF  F+  +A   + +  +      + LLS  WPGNIRELK AAERFVLG++PLG   + 
Sbjct  194  LFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDP  253

Query  243  G-QERPQLKELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVATS  298
              +   +LK  +R++EK +I+DCL RH   I+    ELGIP RTLYHR+K L++ ++
Sbjct  254  NLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSP  310

10) PSEBR_a5366 in NC_015379


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  296 bits (1108),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 162/289 (57%), Positives = 228/289 (79%), Gaps = 1/289 (0%)

Query  19   NLEAFVQSVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQL  78
             L++F++  APL +D++L GETGTGKDTLA +IH++SG  G +VA+NCAA+PE LAES+L
Sbjct  23   TLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESEL  82

Query  79   FGANTGAFTGANQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQS  138
            FG  +GA+TGA+++RAG++EA+HNGTLYLDEIDSMPL LQAKLLRVLE R ++RLGST+ 
Sbjct  83   FGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRF  142

Query  139  IPVNMRVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRRE  198
            +P+N+RVI ++Q PL  +VE G FRRDL+FRLN+I ++LP LRSR +++ +LF+ +V   
Sbjct  143  VPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMET  202

Query  199  AQALDRPYVAPSPALLRQLLGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKL  258
            A+  ++P     P++L +LL+  WPGNIREL+ AA R+VLG+++L   E+  +  + + L
Sbjct  203  AHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDED-PNLEGNIHL  261

Query  259  KEHLQQFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQISTS  307
            K  L+QFEK LI+DC+ RH  CI+ VI+ELGI+RRTLY RMK L I+++
Sbjct  262  KGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSP  310

11) hrpS in NC_017390


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 173/297 (59%), Positives = 227/297 (77%), Gaps = 1/297 (0%)

Query  24   EEQPIDIHDTLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAI  83
            E++ +DI +TL   I+  APL++D+VLEGETGTGKDTLAR+IHQLSG  G LVA+NCAA+
Sbjct  14   EHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAV  73

Query  84   PETLAESELFGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRG  143
            PE LAESELFG+  GAYTGA+++RAGY+EA++NG L+LDEIDSMPL LQAK+LRVLE RG
Sbjct  74   PEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRG  133

Query  144  VERLGGTQFTPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIP  203
            +ERLG+T+F P+N+RVIVATQTPL  LVE G FRRDL+FRLN + IQL  LR+R++ + +
Sbjct  134  IERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPS  193

Query  204  LFRSFIQKAASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHC  263
            LF  F+  +A   + +  +      + LLS  WPGNIRELK AAERFVLG++PLG   + 
Sbjct  194  LFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDP  253

Query  264  G-QERPQLKELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVATS  319
              +   +LK  +R++EK +I+DCL RH   I+    ELGIP RTLYHR+K L++ ++
Sbjct  254  NLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSP  310

12) hrpS in NC_012214


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  295 bits (1106),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 173/297 (59%), Positives = 227/297 (77%), Gaps = 1/297 (0%)

Query  24   EEQPIDIHDTLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAI  83
            E++ +DI +TL   I+  APL++D+VLEGETGTGKDTLAR+IHQLSG  G LVA+NCAA+
Sbjct  14   EHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAV  73

Query  84   PETLAESELFGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRG  143
            PE LAESELFG+  GAYTGA+++RAGY+EA++NG L+LDEIDSMPL LQAK+LRVLE RG
Sbjct  74   PEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRG  133

Query  144  VERLGGTQFTPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIP  203
            +ERLG+T+F P+N+RVIVATQTPL  LVE G FRRDL+FRLN + IQL  LR+R++ + +
Sbjct  134  IERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPS  193

Query  204  LFRSFIQKAASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHC  263
            LF  F+  +A   + +  +      + LLS  WPGNIRELK AAERFVLG++PLG   + 
Sbjct  194  LFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDP  253

Query  264  G-QERPQLKELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVATS  319
              +   +LK  +R++EK +I+DCL RH   I+    ELGIP RTLYHR+K L++ ++
Sbjct  254  NLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSP  310

13) hrpS in NC_016830


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  294 bits (1100),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 162/289 (57%), Positives = 228/289 (79%), Gaps = 1/289 (0%)

Query  19   NLEAFVQCVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQL  78
             L++F++  APL +D++L GETGTGKDTLA +IH++SG  G +VA+NCAA+PE LAES+L
Sbjct  23   TLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESEL  82

Query  79   FGANTGAFTGASQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQN  138
            FG  +GA+TGAS++RAG++EA+HNGTLYLDEIDSMPL LQAKLLRVLE R ++RLGST+ 
Sbjct  83   FGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRF  142

Query  139  IPVNMRVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRRE  198
            +P+N+RVI ++Q PL  +VE G FRRDL+FRLN+I ++LP LRSR +++ +LF+ +V   
Sbjct  143  VPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMET  202

Query  199  AQALDRPYVAPSPALLRQLIGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKL  258
            A+  ++P     P++L +L++  WPGNIREL+ AA R+VLG+++L   E+  +  + + L
Sbjct  203  AHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDED-PNLEGNIHL  261

Query  259  KEHLQQFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQISTS  307
            K  L+QFEK LI+DC+ RH  CI+ VI+ELGI+RRTLY RMK L I+++
Sbjct  262  KGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSP  310

14) hrpR in NC_004578


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  293 bits (1097),  Expect = 7e-81, Method: Compositional matrix adjust.
 Identities = 165/277 (60%), Positives = 217/277 (79%), Gaps = 0/277 (0%)

Query  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90
            L++D++L GETGTGKDTLA RIH+LS+R GP+V++NCAA+PE LAES+LFGV+ GA+TG 
Sbjct  34   LNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYTGA  93

Query  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150
             ++R GYIEAS  GTLYLDEIDSMPL LQAKLLRVLE RGIERLGST F+P++LR+I ++
Sbjct  94   SKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIVAT  153

Query  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210
            Q PL+ LVE+G FRRDLFFRLNV+ ++LP+LR R +++ +LF++F    A    +P P  
Sbjct  154  QTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIPQR  213

Query  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270
            D++ ++ LLSH WPGNIRELK AA RFVLG + LG+D    L+    L+  +R +EK LI
Sbjct  214  DPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKGYLRQFEKALI  273

Query  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307
            QD L RH   +++V+ EL +PRRTLYHRMK L++ +P
Sbjct  274  QDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSP  310

15) hrpR in NC_005773


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  292 bits (1094),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 164/285 (58%), Positives = 223/285 (79%), Gaps = 0/285 (0%)

Query  22   HQIVMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFG  81
            + ++ ++A L++D++L GETGTGKDTLA RIH+LS+R GP+V++NCAA+PE LAES+LFG
Sbjct  25   QSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFG  84

Query  82   VVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVERLGSTEFIP  141
            V+ GA+TG  ++R GYIEAS  GTLYLDEIDSMPL LQAKLLRVLE RG+ERLGST F+P
Sbjct  85   VMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVP  144

Query  142  LDLRVIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQEIAA  201
            L+LRVI ++Q PL+ LVE+G FRRDLFFRLNV+ ++LP+LR R +++ +LF++F  E A 
Sbjct  145  LNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAH  204

Query  202  EFQRPVPVLDNGRVQILLSHDWPGNVRELKSAAKRFVLGFPLLGAEPMDARDPVTGLRMQ  261
              ++P+P  D + ++ LLSH WPGN+RELK AA RFVLG + LG++     +    L+  
Sbjct  205  KHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKGY  264

Query  262  MRVIEKMLIQDALKRHRHNVDAVLQELELPRRTLYHRMKELGVAA  306
            +R +EK LIQD L RH   +++V+ EL +PRRTLYHRMK L++ +
Sbjct  265  LRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINS  309

16) HrpR in NC_007005


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  292 bits (1092),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 165/305 (55%), Positives = 233/305 (77%), Gaps = 5/305 (1%)

Query  2    STDIDNDVLTCCNVTALSAGHQIVMNSVLMDMDLLLCGETGTGKDTLASRIHELSSRTGP  61
            S++++++VL       +++ + ++ ++  +++D++L GETGTGKDTLA RIH+LS+R GP
Sbjct  10   SSQMEHEVLD-----IFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGP  64

Query  62   FVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAK  121
            +V++NCAA+PE LAES+LFGV+ GA+TG  ++R GYIEAS  GTLYLDEIDSMPL LQAK
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  122  LLRVLESRGVERLGSTDFIPLDLRVIASAQRPLDELVEQGLFRRDLFFRLNVLTLQLPAL  181
            LLRVLE RG+ERLGST F+PL+LRVI ++Q PL+ LVE+G FRRDLFFRLNV+ +QLP+L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  182  RKRREQILPLFDQFTQDVAAESGRSVPTLDNRRVQILLSHDWPGNVRELKSAAKRFVLGL  241
            R R +++ +LF++F  + A    +++P  D   ++ LLSH WPGN+RELK AA RFVLG+
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGM  244

Query  242  PLLGAEPVEARDPVTGLRMQMRVIEKMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKE  301
            + LG++     +    L+  +R +EK LIQD L RH   +++V+ EL +PRRTLYHRMK 
Sbjct  245  SPLGTDEDPNLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKS  304

Query  302  LGVAS  306
            L++ S
Sbjct  305  LSINS  309

17) hrpS in NC_013971


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  290 bits (1087),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 173/296 (59%), Positives = 226/296 (77%), Gaps = 1/296 (0%)

Query  24   EEQPIDIHDTLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAI  83
            E++ +DI +TL   I+  APL++D+VLEGETGTGKDTLAR+IHQLSG  G LVA+NCAA+
Sbjct  14   EHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAV  73

Query  84   PETLAESELFGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRG  143
            PE LAESELFG+  GAYTGA+++RAGY+EA++NG L+LDEIDSMPL LQAK+LRVLE RG
Sbjct  74   PEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRG  133

Query  144  VERLGGTRFTPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIP  203
            +ERLG+TRF P+N+RVIVATQTPL  LVE G FRRDL+FRLN + IQL  LR+R++ + +
Sbjct  134  IERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPS  193

Query  204  MFRSFIQKAASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDLPCHC  263
            +F  F+  +A   + +  +      + LLS  WPGNIRELK AAERFVLG++PL+   + 
Sbjct  194  LFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDP  253

Query  264  G-QERPQLKELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVNT  318
              +   +LK  +R++EK +I DCL RH   I+    ELGIP RTLYHR+K L++N+
Sbjct  254  NLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINS  309

18) hrpS in NC_013961


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  290 bits (1087),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 173/296 (59%), Positives = 226/296 (77%), Gaps = 1/296 (0%)

Query  24   EEQPIDIHDTLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAI  83
            E++ +DI +TL   I+  APL++D+VLEGETGTGKDTLAR+IHQLSG  G LVA+NCAA+
Sbjct  14   EHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAV  73

Query  84   PETLAESELFGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRG  143
            PE LAESELFG+  GAYTGA+++RAGY+EA++NG L+LDEIDSMPL LQAK+LRVLE RG
Sbjct  74   PEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRG  133

Query  144  VERLGGTRFTPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIP  203
            +ERLG+TRF P+N+RVIVATQTPL  LVE G FRRDL+FRLN + IQL  LR+R++ + +
Sbjct  134  IERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPS  193

Query  204  MFRSFIQKAASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDLPCHC  263
            +F  F+  +A   + +  +      + LLS  WPGNIRELK AAERFVLG++PL+   + 
Sbjct  194  LFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDP  253

Query  264  G-QERPQLKELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVNT  318
              +   +LK  +R++EK +I DCL RH   I+    ELGIP RTLYHR+K L++N+
Sbjct  254  NLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINS  309

19) rspS in NC_017911


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  288 bits (1077),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 159/285 (56%), Positives = 232/285 (82%), Gaps = 0/285 (0%)

Query  21   IETTLNNTAALNVDILLLGETGTGKDTLAQRIHRLSGRRGNFVAVNCAAIPESLAESQLF  80
            +++ + ++A+LNVD++L GETGTGKDTLA+RIH+LSGR G +VA+NCAA+PE LAES+LF
Sbjct  24   LQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELF  83

Query  81   GVNSGAYTGAVQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLRVLECRGVERLGSTRFI  140
            GV +GAYTGA +SRAG++EA+H GTLYLDEIDSMPL LQAKLLRVLE RG+ERLGSTRF+
Sbjct  84   GVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFV  143

Query  141  SVDMRVIASAQQSLQIMVDQGAFRRDLYFRLNVVNIELPALRDRRERIIPLFLQMIQEEA  200
            ++++RVI ++Q +L+ +V++G FRRDL+FRLNV++I+LP+LR R +++ +LF + + E A
Sbjct  144  PLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETA  203

Query  201  DQFNCTPPSPSDGLLHELLCHPWLGNVRELRSAAKRFVLGLPPLSAPACRQPPPQTDLKA  260
            ++ +   P    ++L+ LL H W GN+REL+ AA RFVLG++PL++    +   + +LK+
Sbjct  204  HKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

Query  261  RLQQIEKALIEESMYRHQHCVDTVAIELGVAKRTLYYRMKQLNIS  305
             L+Q+EKALI++ + RH  C+++V  ELG+++RTLY RMK L+I+
Sbjct  264  YLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSIN  308

20) D781_3924 in NC_020064


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  285 bits (1067),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 176/288 (62%), Positives = 233/288 (81%), Gaps = 1/288 (0%)

Query  39   GYLHKLTKIVAPLHVDVLLEGETGTGKDTLARRIYELSGGNGPFVPVNCGAIPESLAESE  98
            G L+ + +  APL+VD++LEGETGTGKDTLARRI +LSG +GP+V++NC+A+PE LAESE
Sbjct  22   GTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESE  81

Query  99   LFGVEAGAYTGASHARAGYLETANNGILFLDEIDSMPLTVQAKLLRVLETRTITRLGSTK  158
            LFGV AGAYTGAS +RAGY+E+++NG L+LDEIDSMPL +QAKLLRVLE R I RLGST+
Sbjct  82   LFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTR  141

Query  159  PISLHLRVIVAAQTPLEQLVEAGRFRRDLCFRLNTIKLETPTLRSRPELIIPLFRRFAIE  218
             ++L+LRVIVA+QTPLE+LVE G+FRRDL FRLN IK++ PTLRSR + + +LF RF +E
Sbjct  142  FVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVME  201

Query  219  SALRLGMPHPPRSTALDEALLLHCWPGNLRELKAAAERFILGLPPL-NQALPQESGAVLL  277
            +A +   P P R  ++ + LL H WPGN+RELK AAERF+LG++PL  +  P+  G + L
Sbjct  202  TAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHL  261

Query  278  KERLKRIERSLIHDCLhrhdhriddvvhELGIPRRTLYHRLKQLNIHA  325
            K  L+++E++LI+DCL RH   I+ V+ ELGIPRRTLYHR+K L+I++
Sbjct  262  KGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINS  309

21) Pmen_0032 in NC_009439


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  281 bits (1052),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 162/285 (57%), Positives = 220/285 (78%), Gaps = 2/285 (0%)

Query  19   NLEVVASSISELNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPESLFESEL  78
             L+      + LN+D++L GETG+GKDTLA+ +H+LSGR GP+VA+NCAA+PE L ESEL
Sbjct  23   TLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESEL  82

Query  79   FGVTSGAYTGADHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIERLGSTTP  138
            FGV +GAYTGA  SR GY+EA++ GTLYLDEIDSMP +LQAKLLRVLE R IERLGST  
Sbjct  83   FGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRF  142

Query  139  VPLDICVVASAQRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAFEA  198
            VPL++ V+ ++Q +L+ LVE+G FRRDL+FRLNV+ ++LP+LR + + + ++FERF  E+
Sbjct  143  VPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMET  202

Query  199  SQDMDTALPVIDPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIEAEQPIECD--LK  256
            ++  + ++P  DP++ + LL+H WPGN+RELK AA R VLG++ LG + +  +E +  LK
Sbjct  203  AHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLK  262

Query  257  CQLRLIEKVLIQESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV  301
              LR +EK LIQ+ L RH  CIE+V+ EL+IPRRTLYHRMK L +
Sbjct  263  GYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSI  307

22) Pmen_0033 in NC_009439


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  280 bits (1046),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 162/282 (58%), Positives = 220/282 (79%), Gaps = 5/282 (1%)

Query  28   AGHFRMDLLLCGETGTGKDVLARHIHDLSGRTGAFVGINCAAIPEALAESQLFGVASGAF  87
            A+ + +D++L GETGTGKD LAR+IH+LSGR G++V++NCAA+PE LAES+LFGV +GA+
Sbjct  31   AAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAY  90

Query  88   TGANRSRQGYIEASNDGTLYLDEIDSMPLQLQAKLLRVLETRGVERLGTTKFIPLNLRII  147
            TGA++SR GYIEAS++GTLYLDEIDSMPL LQAKLLRVLE RG+ERLG+T+F+PLNLR+I
Sbjct  91   TGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVI  150

Query  148  ASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPPLRQRRELILPLFKRFTRSLGAKQANGA  207
             +TQ PLE LVE+G FRRDL+FRLN + + LP LR R + + +LF RF    + K+ +  
Sbjct  151  VATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPI  210

Query  208  QALDSQLIQLLLSHPWPGNIRELKSAAKRYVIGLPPIDAGVLADLEDGDFPHDRGLKKRM  267
               D+ +++ LLSH WPGNIRELK AA R+V+G++P++++     ED ++  +  LK  +
Sbjct  211  PQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTD-----EDPNLEGNIHLKGYL  265

Query  268  RAVEKMLIQDALKRHKNGLEAVAEELGISRRTLYQRIKELDV  309
            R  EK LIQD L RH + +E+V  ELGI+RRTLY+R+K L +
Sbjct  266  RQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSI  307

23) hrpS in NC_004578


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  277 bits (1037),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 160/276 (58%), Positives = 217/276 (79%), Gaps = 0/276 (0%)

Query  27   SQLGIDVLLSGETGTGKDTIARRIHEMSGRKGRLVAMNCAAIPESLAESELFGVVSGAYT  86
            + L +D++L GETGTGKDT+ARRIH++SGR G LVA+NCAA+PE LAESELFGV++GAYT
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  87   GADRSRVGYVEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDICVIA  146
            GA +SR GY+EA++ GTLYLDEIDSMPL LQAKLLRVLE R++ERLGST  + L++ VI 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  147  SAQCSLDDAVERGQFRRDLYFRLNVLTLKLPPLRNQSDRIVPLFTRFTAAAARELGVPVP  206
            ++Q +L+  VE G+FRRDL+FRLNV+ ++LP LR++ D++ +LF RF   +A+    P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  207  DVCPLLHKVLLGHDWPGNIRELKAAAKRHVLGFPLLGAEPQGEEHLACGLKSQLRVIEKA  266
            +  P + + LL+H WPGNIRELK AA R VLG + LG++ + + +    LK+ LR +EKA
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKGYLRQFEKA  271

Query  267  LIQESLKRHDNCVDSVSLELDVPRRTLYRRIKELQI  302
            LIQ+ L RH +C++SV  EL++PRRTLY+R+K L I
Sbjct  272  LIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSI  307

24) HrpS in NC_007005


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  276 bits (1031),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 163/276 (60%), Positives = 217/276 (79%), Gaps = 0/276 (0%)

Query  27   SQLGIDVLLSGETGTGKDTIARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYT  86
            + L +D++L GETGTGKDT+ARRIH++SGR+G +V++NCAA+PE LAESELFGV++GAYT
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  87   GADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTINLDICVIA  146
            GA +SR GYIEA++ GTLYLDEIDSMPL LQAKLLRVLE R++ERLGST  + L++ VI 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  147  SAQACLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELSVPIP  206
            ++Q+ L+  VEEGKFRRDL+FRLNV+ ++LP LR + +++ +LF RFV  +A     PIP
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  207  DVCPLLQQVLTGHHWPGNIRELKAAAKRHVLGFPLLGADSQTEEHLACGLKFQLRAIEKA  266
            +  P + + L +H+WPGNIRELK AA R VLG + LG+D + + +    LK  LR +EKA
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKGYLRQFEKA  271

Query  267  LIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302
            LIQ+ L RH +CI++   EL+IPRRTLY+R+K LSI
Sbjct  272  LIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSI  307

25) hrpS in NC_005773


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  261 bits (975),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 159/276 (58%), Positives = 217/276 (79%), Gaps = 0/276 (0%)

Query  27   SQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYT  86
            + L +D++L GETGTGKDT+A+RIH +SGR G LVA+NCAA+PE LAESELFGV++GAYT
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  87   GADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIA  146
            GA +SR GYIEA++ GTLYLDEIDSMPL LQAKLLRVLE R++ERLGST  + L++ VI 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  147  SAQSSLDDAVEQGKFRRDLYFRLNVltlqlpplrtqpERILPLFKRFMAAAAKELNVASA  206
            ++Q++L+  VE+GKFRRDL+FRLNV+ +QLP LR++ +++ +LF RF+  +A   + + +
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  207  DVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAIEKA  266
            +  P + + LL+H WPGNIRELK AA R VLG + LG D +++ +    LK+ LR +EKA
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKGYLRQFEKA  271

Query  267  LIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302
            LIQ+ L RH +CI++   EL++PRRTLY+R+K L I
Sbjct  272  LIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSI  307

26) rspR in NC_012660


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  259 bits (968),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 155/285 (55%), Positives = 222/285 (78%), Gaps = 0/285 (0%)

Query  21   IEEILSGTAQLNIDILLLGETGTGKDTLAQRIHRLSGRRGSFIAVNCAAIPETLAESQLF  80
            ++ ++  +A LN+D++L GETGTGKDTLA+RIH+LSGR G+++A+NCAA+PE LAES+LF
Sbjct  24   LQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELF  83

Query  81   GVNSGAYTGAVQSRAGFIEAAHLGTLYLDEIDSMPLSLQAKLLRTLESRGVERLGSTRFI  140
            GV +GAYTGA +SRAG+IEA+H GTLYLDEIDSMPL LQAKLLR LE RG+ERLGSTRF+
Sbjct  84   GVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFV  143

Query  141  PVDMRVIASAQQSLYEMVERGTFRRDLYFRLSVVNIQLPSLRECRDRIIPLFLTMIRQEA  200
            P+++RVI ++Q +L  +VE G FRRDL+FRL+V++IQLP+LR   D++ +LF   + + A
Sbjct  144  PLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETA  203

Query  201  ESFKCPYpqppssllqqllCHPWPGNVRELSSTAKRFVLGLPPLSVRGKNPKISEASLKE  260
            +    P PQ  +S+L++LL H WPGN+REL  +A RFVLG++PL+        ++  LK 
Sbjct  204  HKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

Query  261  RLQRIEKSLIEESLHRHNGNVDLAAADLRVAKRTFYYRMKQLGID  305
             L+++EK+LI++ L RH   ++   ++L +++RT+Y RMK L+I+
Sbjct  264  YLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSIN  308

27) H045_00470 in NC_020209


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  237 bits (885),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 133/240 (56%), Positives = 191/240 (80%), Gaps = 0/240 (0%)

Query  1    MNCAAIPESLAESQLFGVNSGAFTGAMQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLR  60
            +NCAA+PE LAES+LFGV +GA+TGA +SRAG++EA+H GTLYLDEIDSMPL LQAKLLR
Sbjct  68   LNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLR  127

Query  61   VLESRGVERLGSTRFIPVDMRVIASAQHSLHAMVEQGTFRRDLFFRLNVVTIQLPALRDQ  120
            VLE RG+ERLGSTRF+P+++RVI ++Q +L+ +VE+G FRRDLFFRLNV+ IQLP+LR +
Sbjct  128  VLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSR  187

Query  121  RERIVPLFLQMVRQEAELFECPAPTPTAELLQQLLCQSWLGNIRELRSTAKRFVlglppl  180
             +++ +LF + V + A+  + P P   + +L++LL + W GNIREL+ +A RFVLG++PL
Sbjct  188  LDHLPSLFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPL  247

Query  181  spplsKPQGNEMSLKARLQEIEKALIEESMQRNDRCVDRVAIEMGIAKRTLYHRMKQLAI  240
            +         ++ LK+ L+++EKALI++ + R+ +C++ V  E+GI++RTLYHRMK L+I
Sbjct  248  GTDEDPNLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSI  307

28) dctD in NC_011983


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  200 bits (742),  Expect = 9e-53, Method: Compositional matrix adjust.
 Identities = 121/292 (42%), Positives = 191/292 (66%), Gaps = 4/292 (1%)

Query  13   LRHTLRQIADTDVDVLVTGETGSGKEVVASLLHRWSRRAKGNFVALNCGALPETVIESEL  72
            L+  +R+ A  +VD+++ GETG+GK+ +A  +H+ S R  G +VALNC+A+PE + ESEL
Sbjct  24   LQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGRE-GPLVALNCAAVPEQLAESEL  82

Query  73   FGHEPGAFTGAQKKRIGRIEHASAGTLFLDEIESMPPAVQVQLLRVLEMREVTPLGTNEV  132
            FG  +GA+TGA K R G IE +  GTL+LDEI+SMP  +Q +LLRVLEMR +  LG+   
Sbjct  83   FGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRF  142

Query  133  RPVDLRVVAAAKVDLGDPRQRGDFREDLYYRLNVVTISIPPLRDRRDDIPLLFGYFAERA  192
             P++LRV+ A++  L    + G FR DL++RLNV+ I +P LR R D++P LF  F   +
Sbjct  143  VPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMET  202

Query  193  ASRFKRDVPTMSTAIRRHLQHHDWPGNVRELSHFAERFVLGLESAAGSKPGETPSTDTVL  252
            A +  + +P    ++  +L  H WPGN+REL   AERFVLG+ + +    +E P+ +  +
Sbjct  203  AHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGT---DEDPNLEGNI  259

Query  253  PLPARVERYEADLIRETLAQNGGDVRRTIEALGIPRKTFYDKLQRHGIVRSE  304
             L + + ++E  LI++ L+++   +   I  LGIPR+T+Y++++  +I  +E
Sbjct  260  HLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSPE  311

29) MexAM1_META2p0902 in NC_012811


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  184 bits (682),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 122/302 (41%), Positives = 193/302 (64%), Gaps = 25/302 (8%)

Query  101  LRGEIIKVAPLEIPVLIRGESGTGKELVAQALHRLSARRDSAVVMVNAAALPATLVESEL  160
            L++ I K APL++ +++ GE+GTGK+ +A+ +H+LS+R ++++V +N AA+P  L ESEL
Sbjct  24   LQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPLVALNCAAVPEQLAESEL  82

Query  161  FGYEPGAFTGADRKGRKGKFEQAAGGTIFLDEIGDMPMEVQAKLLRVLQDRIVERIGSDR  220
            FG  +GA+TGA  K+R G +E +  GT++LDEI+ MP+ +QAKLLRVL+ R +ER+GS R
Sbjct  83   FGVMAGAYTGAS-KSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTR  141

Query  221  PQHVDFRLVTATNHDLQELVTAGRFRLDLFYRISAITIEIPPLRSRVDDIPVLVAHFIKD  280
               +++R++ AT+  L+ LV  G+FR DLF+R++ I I++P LRSR+D++P L  +F+ +
Sbjct  142  FVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVME  201

Query  281  VADRHHQPCPEVTDSALSYLMEQPWPGNIRQLRHEVERAFVFAENGRICADTFTPADDFR  340
             A++HHQP P+   S L+ L+ + WPGNIR+L+   ER FV++         +   +D  
Sbjct  202  TAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAER-FVLG------MSPLGTDED--  252

Query  341  APSTTPALAARDIATANPGAATLKASIGQVEIELVRAALTRNQGNKKRAAQELGISRSYL  400
                 P L          G   LK+ + Q E  L++  L+R+         ELGI+R  L
Sbjct  253  -----PNLE---------GNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTL  298

Query  401  YK  402
            Y 
Sbjct  299  YH  300

30) MCA0447 in NC_002977


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  150 bits (554),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 95/233 (41%), Positives = 159/233 (69%), Gaps = 1/233 (0%)

Query  12   FEALIRSARLVAATDVTVLIVGETGTGKELLARALQGHSLRADRPFVTLNCAALPASVAE  71
            F +L    R  A+ +V +++ GETGTGK+ LAR ++  S R + P+V+LNCAA+P  +AE
Sbjct  21   FGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREG-PLVALNCAAVPEQLAE  79

Query  72   SELFGHRRGAFTGAVSDFPGRLETADGGTLFLDEINSLPLPVQAKLLRFLDSGEIQPVGA  131
            SELFG   GA+TGA    +G +E+++ GTL+LDEI+S+PL +QAKLLR L+   I+ +G+
Sbjct  80   SELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGS  139

Query  132  RAPQRVDVRIIAATNANLADKIDKGEFRRDLYYRLSVVPLEIPPLRERGGDVELLLHHFM  191
                 +++R+I AT++ L   ++ G FRRDL++RL+V+ +++P LR R +++  L+++F+
Sbjct  140  TRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFV  199

Query  192  RHFAQTHAIPPAVFGRGAVRRLIAYPWPGNIRELRNLCERLAILMPGRVIEEQ  244
             + A+ H  P +  + + + RL++  WPGNIREL+   ER+ + M+    +E+
Sbjct  200  METAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDED  252

31) pspF in NC_016617


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  144 bits (531),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 100/238 (43%), Positives = 156/238 (66%), Gaps = 3/238 (1%)

Query  15   FHAVLAHVSRVAPLERPLLVIGERGTGKELIAARLHYLSRRWDRPFVKVNCAALTESLLD  74
            F ++ + + + APL+  +++ GE GTGK+ +A R+H LS R + P+V +NCAA+ E L +
Sbjct  21   FGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPLVALNCAAVPEQLAE  79

Query  75   SELFGHEAGAFTGAIRRQIGRVEQADGGTLFLDEIATASAAVQEKLLRAVEYGEIERVGG  134
            SELFG  AGA+TGA + + G +E ++ GTL+LDEI + +  +Q KLLR +E   IER+G+
Sbjct  80   SELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGS  139

Query  135  -RTQTVDVRVIGATNADLPALAEAGRFRADLLDRLAFDVVTLPPLRARREDIPVLAEHFA  193
             R   +++RVI AT++ L  L E G+FR DL+ RL    + LP LR+R +++P L E+F 
Sbjct  140  TRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFV  199

Query  194  LGMVRELERSLFPGFAPRALEQLLDHGWPGNVRELRNAVERSVAASDPEGMVEEILLD  251
            +   +  ++++ P   P  L++LL H WPGN+REL+ A ER V +  P G  E+  L+
Sbjct  200  METAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLE  256

32) Hneap_1253 in NC_013422


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 94/227 (42%), Positives = 152/227 (67%), Gaps = 7/227 (3%)

Query  16   VFESVLRSVQIVAATEATTLILGESGTGKELVARALHDGSGRRARPYVAVNCASFSEALA  75
            +F ++   ++  A+ +   ++ GE+GTGK+ +AR +H+ SGR + P VA+NCA+ +E LA
Sbjct  20   IFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREG-PLVALNCAAVPEQLA  78

Query  76   ESQLFGHKRGAFTGAQCDYDGQIRSADGGTLFLDEIAELSLPVQAKLLRFLETGEVMGLG  135
            ES+LFG   GA+TGA     G I +++ GTL+LDEI  ++L +QAKLLR LE   +  LG
Sbjct  79   ESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLG  138

Query  136  ESQSRRVDVRLVAATHRDLLQMVEQGLFRADLFYRLQVVPIELPPLRMRQGDIDWLLARF  195
             ++   +++R++ AT+  L ++VE+G FR DLF+RL+V+ I+LP LR R +++  L+ RF
Sbjct  139  STRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERF  198

Query  196  MNEFAERYTLHMPRLTSKARGVIRR---HPWPGNVRELRNMAERLVI  239
            + E A++   H   +  +  +V+ R   H WPGN+REL+  AER+V+
Sbjct  199  VMETAHK---HHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFVL  242

33) pspF in NC_017531


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 98/238 (42%), Positives = 155/238 (66%), Gaps = 3/238 (1%)

Query  1    MSPNNDNLLGESNNFLEVLEQ-VSKLAPLEKPVLVVGERGTGKELIASRLHYLSDRWQGP  59
            M+ ++ ++  E  +++  L+  + K APL+  +++ GE GTGK+ +A R+H LS+R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGQLERVGGNHVFQVNVRLICATNEDLPALAAAGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+ +   +N+R+I AT+  L  L   GKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERRSDILVMADHFAIQMCRELTLPLFPGFTQQAQQTLLEHPWPGNVRELKNVVERSV  237
            R R  ++  + ++F ++  +    P+ P       + LL H WPGN+RELK   ER V
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

34) PAGR_g2078 in NC_017554


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 98/238 (42%), Positives = 155/238 (66%), Gaps = 3/238 (1%)

Query  1    MSPNNDNLLGESNNFLEVLEQ-VSKLAPLEKPVLVVGERGTGKELIASRLHYLSDRWQGP  59
            M+ ++ ++  E  +++  L+  + K APL+  +++ GE GTGK+ +A R+H LS+R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGQLERVGGNHVFQVNVRLICATNEDLPALAAAGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+ +   +N+R+I AT+  L  L   GKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERRSDILVMADHFAIQMCRELTLPLFPGFTQQAQQTLLEHPWPGNVRELKNVVERSV  237
            R R  ++  + ++F ++  +    P+ P       + LL H WPGN+RELK   ER V
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

35) pspF in NC_016816


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 98/238 (42%), Positives = 155/238 (66%), Gaps = 3/238 (1%)

Query  1    MSPNNDNLLGESNNFLEVLEQ-VSKLAPLEKPVLVVGERGTGKELIASRLHYLSDRWQGP  59
            M+ ++ ++  E  +++  L+  + K APL+  +++ GE GTGK+ +A R+H LS+R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGQLERVGGNHVFQVNVRLICATNEDLPALAAAGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+ +   +N+R+I AT+  L  L   GKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERRSDILVMADHFAIQMCRELTLPLFPGFTQQAQQTLLEHPWPGNVRELKNVVERSV  237
            R R  ++  + ++F ++  +    P+ P       + LL H WPGN+RELK   ER V
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

36) Rahaq2_2781 in NC_016818


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  139 bits (511),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 97/236 (42%), Positives = 156/236 (67%), Gaps = 3/236 (1%)

Query  1    MTDNTDNLLGEANAFIEVLEQ-VSQLAKLNKPVLVTGERGSGKELIAHRLHYLSPRWQGP  59
            M  ++ ++  E   ++  L+  + + A LN  +++ GE G+GK+ +A+R+H LS R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPMLAAEGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+++ + +++R++ AT+  L  L  EGKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERQQDIMLLAEHFAIQMCRELSLPLFPGFTEYARETLLAYRWPGNIRELKNVVER  235
            R R +++  L E+F ++  +    P+ P       + LL+ RWPGNIRELK   ER
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAER  239

37) pspF in NC_012880


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  139 bits (509),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 157/235 (67%), Gaps = 8/235 (3%)

Query  1    MTHDNESLLGEANRFLEVLEQVSQLAPLNKPVLVIGERGTGKELIASRLHYLSARWQGAF  60
            M H+   ++G  + F      + + APLN  +++ GE GTGK+ +A R+H LS+R +G++
Sbjct  13   MEHEVLDIFGTLQSF------IRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQRRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA + + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGVLERVGGSQPLQVDVRLVCATNEDLPALAAAGKFRADLLDRLAFDVVHLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    ++LP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  ARQQDIMLLAQHFAVQMCRELRLPLFPGFTPNAEHILLSYPWPGNIRELKNVVER  235
            +R +++  L ++F ++  +  + P+ P   P+  + LLS  WPGNIRELK   ER
Sbjct  186  SRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAER  239

38) pspF in NC_014500


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 98/235 (42%), Positives = 151/235 (65%), Gaps = 8/235 (3%)

Query  1    MAHEQESLLGEANSFLEVLEQVSQLAQLNKPVLVIGERGTGKELIASRLHYLSPRWQGPF  60
            M HE   ++G  +SF      + + A LN  +++ GE GTGK+ +A R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSF------IRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGVLERVGGGQSLQVDVRLVCATNEDLPTLAAQGKFRADLLDRLAFDVVHLPPLR  180
            LRV+E   +ER+G+ + + +++R++ AT+  L  L  +GKFR DL+ RL    ++LP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRQQDIMLLAQHFAVQMCRELGLPLFPGFSPQAERTLLDYAWPGNIRELKNVVER  235
             R +++  L ++F ++  +    P+ P   P     LL   WPGNIRELK   ER
Sbjct  186  SRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAER  239

39) pspF in NC_017047


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 96/236 (41%), Positives = 156/236 (67%), Gaps = 3/236 (1%)

Query  1    MTDNTDNLLGEANAFIEVLEQ-VSQLAKLNKPVLVTGERGSGKELIAHRLHYLSPRWQGP  59
            M  ++ ++  E   ++  L+  + + A LN  +++ GE G+GK+ +A+R+H LS R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPVLAAEGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+++ + +++R++ AT+  L  L  EGKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERQQDIMLLAEHFAIQMCRELSLPLFPGFTDYARQTLMAYRWPGNIRELKNVVER  235
            R R +++  L E+F ++  +    P+ P       + L++ RWPGNIRELK   ER
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAER  239

40) Rahaq_2750 in NC_015061


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  137 bits (504),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 96/236 (41%), Positives = 156/236 (67%), Gaps = 3/236 (1%)

Query  1    MTDNTDNLLGEANAFIEVLEQ-VSQLAKLNKPVLVTGERGSGKELIAHRLHYLSPRWQGP  59
            M  ++ ++  E   ++  L+  + + A LN  +++ GE G+GK+ +A+R+H LS R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPVLAAEGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+++ + +++R++ AT+  L  L  EGKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERQQDIMLLAEHFAIQMCRELSLPLFPGFTDYARQTLMAYRWPGNIRELKNVVER  235
            R R +++  L E+F ++  +    P+ P       + L++ RWPGNIRELK   ER
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAER  239

41) Pat9b_2048 in NC_014837


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  137 bits (503),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 155/238 (66%), Gaps = 3/238 (1%)

Query  1    MANGNDNLLGESNNFLEVLEQ-VSRLAPLEKPVLVIGERGTGKELIASRLHYLSDRWQGP  59
            M  ++ ++  E  +++  L+  + + APL+  +++ GE GTGK+ +A R+H LS+R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGQLERVGGNQSLQVNVRLVCATNEDLPALAAAGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+ + + +N+R++ AT+  L  L   GKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERRSDILVMAEHFAIQMCRELGLPLFPGFTEQAQQTLLNYAWPGNVRELKNVVERSV  237
            R R  ++  + E+F ++  +    P+ P       + LL+  WPGN+RELK   ER V
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

42) Ser39006_2989 in NC_022268


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 99/237 (42%), Positives = 155/237 (66%), Gaps = 8/237 (3%)

Query  1    MDHEKESLLGEANNFLEMLEQVSQLAQLNKPVLVIGERGTGKELIASRLHYLSPRWQGPF  60
            M+HE   ++G  ++F      + + A LN  +++ GE GTGK+ +A R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSF------IRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGVLERVGGGQPLQVDVRLVCATNDNLPVLAEQGKFRADLLDRLAFDVVYLPPLR  180
            LRV+E   +ER+G+ + + +++R++ AT+  L  L E+GKFR DL+ RL    + LP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRQQDIMLLAQHFAVQMCRELGQSLFPGFTPHAEHTLLHYAWPGNIRELKNVVERSV  237
             R +++  L ++F ++  +   Q++ P   P   + LL   WPGNIRELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

43) pspF in NC_014306


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  136 bits (500),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 97/238 (41%), Positives = 158/238 (67%), Gaps = 3/238 (1%)

Query  1    MSENNETLLGESNNFLEVLEQ-VSRLAPLNKPVLVIGERGTGKELIASRLHYLSDRWQGP  59
            M+ ++  +  E  +++  L+  + + APLN  +++ GE GTGK+ +A R+H LS+R +GP
Sbjct  6    MNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGP  64

Query  60   FISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEK  119
            +++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q K
Sbjct  65   LVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAK  124

Query  120  LLRVIEYGHLERVGGSQPLQVSVRLVCATNDDLPLLAQEGKFRADLLDRLAFDVVQLPPL  179
            LLRV+E   +ER+G+++ + +++R++ AT+  L  L +EGKFR DL+ RL    +QLP L
Sbjct  125  LLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTL  184

Query  180  RERRSDILVMAEHFAIQMCRELGLPLFPGFSAQAKQILLDYGWPGNVRELKNVVERSV  237
            R R  ++  + E+F ++  +    P+ P   +   + LL   WPGN+RELK   ER V
Sbjct  185  RSRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

44) pspF in NC_021741


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  136 bits (500),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 96/237 (41%), Positives = 157/237 (67%), Gaps = 8/237 (3%)

Query  1    MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M +++ +++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  RRQQDIMLLAEHFAIQMCRELSLPLFPGFTERARDTLLGYHWPGNVRELKNVVERSV  237
             R +++  L E+F ++  +    P+ P       + LL+ +WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

45) D781_2125 in NC_020064


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  135 bits (496),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 96/237 (41%), Positives = 156/237 (66%), Gaps = 8/237 (3%)

Query  1    MSEQIEPLLGEANAFVEVLEQVSQLATLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M +++  ++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  RRQQDIMLLAEHFAIQMCRELALPLFPGFTAHARETLLGYGWPGNVRELKNVVERSV  237
             R +++  L E+F ++  +    P+ P   +   + LL+  WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

46) pspF in NC_021591


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 96/237 (41%), Positives = 156/237 (66%), Gaps = 8/237 (3%)

Query  1    MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M +++ +++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRQQDIMLLAEHFAIQMCRELSLQLFPGFTERARDTLLAYSWPGNVRELKNVVERSV  237
             R +++  L E+F ++  +    Q +P       + LL+  WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHK-HHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

47) pspF in NC_021659


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  135 bits (494),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 96/237 (41%), Positives = 156/237 (66%), Gaps = 8/237 (3%)

Query  1    MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M +++ +++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRQQDIMLLAEHFAIQMCRELSLQLFPGFTERARDTLLAYSWPGNVRELKNVVERSV  237
             R +++  L E+F ++  +    Q +P       + LL+  WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHK-HHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

48) SerAS12_2622 in NC_015566


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  134 bits (490),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 156/237 (66%), Gaps = 8/237 (3%)

Query  1    MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M +++ +++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRQQDIMLLAEHFAIQMCRELSLQLFPGFTERARDTLIAYSWPGNVRELKNVVERSV  237
             R +++  L E+F ++  +    Q +P       + L++  WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHK-HHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

49) SerAS13_2623 in NC_017573


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  134 bits (490),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 156/237 (66%), Gaps = 8/237 (3%)

Query  1    MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M +++ +++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRQQDIMLLAEHFAIQMCRELSLQLFPGFTERARDTLIAYSWPGNVRELKNVVERSV  237
             R +++  L E+F ++  +    Q +P       + L++  WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHK-HHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

50) SerAS9_2621 in NC_015567


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  134 bits (490),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 156/237 (66%), Gaps = 8/237 (3%)

Query  1    MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M +++ +++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRQQDIMLLAEHFAIQMCRELSLQLFPGFTERARDTLIAYSWPGNVRELKNVVERSV  237
             R +++  L E+F ++  +    Q +P       + L++  WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHK-HHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

51) Atc_1480 in NC_015850


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 97/230 (43%), Positives = 153/230 (67%), Gaps = 8/230 (3%)

Query  10   KVAQSDSTVLLLGESGTTGKEVVAQCLHQHSSRRNGPFVAVNCGAIPAELMESELFGHEK  69
            K A  +  ++L GE+GT GK+ +A+ +HQ S+R +GP+VA+NC+A+P +L ESELFG   
Sbjct  30   KAAPLNVDMVLEGETGT-GKDTLARRIHQLSGR-EGPLVALNCAAVPEQLAESELFGVMA  87

Query  70   GAFTGALVARKGRFELAEGGTLFLDEVAEMSPQMQVKLLRVLQERRFERVGGSRSLHANV  129
            GA+TGA  +R G +E ++ GTL+LDE+  M+  +Q KLLRVL+ R +ER+G++R +  N+
Sbjct  88   GAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNL  147

Query  130  RIIAATHRNLEDRIRENLFREDLYYRLNVFPVDLPPLRCRENDVRLLME-FFLKRQAAET  188
            R+I AT+  LE  + E  FR DL++RLNV+ ++LP LR R +++  L E F +     + 
Sbjct  148  RVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHH  207

Query  189  GNLEVRLTEAAWRVLRDYHWPGNVRELQNLAER----LSILHAGEEIDVE  234
              +  R      R+L + +WPGN+REL+  AER    +S L ++E+ ++E
Sbjct  208  QPIPQRDPSVLNRLLSH-RWPGNIRELKCAAERFVLGMSPLGTDEDPNLE  256

52) pspF in NC_020211


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  133 bits (487),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 96/237 (41%), Positives = 154/237 (65%), Gaps = 8/237 (3%)

Query  1    MNEQPENLLGEANAFVEVLEQVSQVAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPF  60
            M+++  +++G  ++F+       + A LN  +++ GE GTGK+ +A+R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSFI------RKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGQLERVGGSQPLRVDVRLVCATNDDLPTLAAAGKFRADLLDRLAFDVVQLPPLR  180
            LRV+E   +ER+G+++ + +++R++ AT+  L  L   GKFR DL+ RL    +QLP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  QRRPDIMLLAEHFAIQMCRELGLPLFPGFTERARQTLLEYGWPGNVRELKNVVERSV  237
             R  ++  L E+F ++  +    P+ P       + LL   WPGN+RELK   ER V
Sbjct  186  SRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAERFV  241

53) pspF in NC_012912


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  133 bits (489),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 151/235 (65%), Gaps = 8/235 (3%)

Query  1    MAHEKESLLGEANSFLEVLEQVSQLAQLSKPVLVIGERGTGKELIASRLHYLSPRWQGPF  60
            M HE   ++G  +SF      + + A L+  +++ GE GTGK+ +A R+H LS R +GP+
Sbjct  13   MEHEVLDIFGTLQSF------IRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-EGPL  65

Query  61   ISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKL  120
            ++LNCAA+ E+L +SELFG  AGA+TGA K + G +E ++ GTL+LDE+ + P+L+Q KL
Sbjct  66   VALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKL  125

Query  121  LRVIEYGVLERVGGGQSLQVDVRLVCATNEDLPALAAQGKFRADLLDRLAFDVVHLPPLR  180
            LRV+E   +ER+G+ + + +++R++ AT+  L  L  +GKFR DL+ RL    ++LP LR
Sbjct  126  LRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLR  185

Query  181  LRQQDIMLLAQHFAVQMCRELGLPLFSGFSPQAERTLLDYGWPGNIRELKNVVER  235
             R +++  L ++F ++  +    P+ +   P     LL   WPGNIRELK   ER
Sbjct  186  SRLDHLPSLFERFVMETAHKHHQPI-PQRDPSVLNRLLSHRWPGNIRELKCAAER  239

54) SpiGrapes_2045 in NC_016633


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  131 bits (481),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 160/242 (67%), Gaps = 11/242 (4%)

Query  1    MESGHNGYNQQPLGESEVFLDFQNQLSRAATVNRSVLLVGERGSGKEIAARRLHFLSPRW  60
            M+++ +  +++ L   ++F  +Q+ + +AA +N  ++L GE G+GK+  ARR+H LS R 
Sbjct  6    MNTDSSQMEHEVL---DIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGR-  61

Query  61   QQNLVTVNCAALPPSLIETELFGYEQGAFTGAQKTRKGRFEEAEGGTLFLDEIGIIPLEV  120
            +  LV++NCAA+P  L E+ELFG   GA+TGA K+R G +E ++ GTL+LDEI+ +PL +
Sbjct  62   EGPLVALNCAAVPEQLAESELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLL  121

Query  121  QEKILRVVEYGTYERVGSSVTHETNVRIIGATNADLPQLCKEGKFKEDLLDRLSFEVLFL  180
            Q K+LRV+E    ER+GS+     N+R+I AT++ L +L  EGKF+ DL+ RL+   + L
Sbjct  122  QAKLLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKLVEEGKFRRDLFFRLNVIKIQL  181

Query  181  PPLRKRGDDILLLANYFAAKMALECGRQEMPILSEEVSAV---LLGYSWPGNVRELKNVI  237
            P LR R D+   L++ F  +  +E ++++   +++  ++V   LL+  WPGN+RELK   
Sbjct  182  PTLRSRLDH---LPSLF-ERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAA  237

Query  238  ER  239
            ER
Sbjct  238  ER  239

55) PLES_10441 in NC_011770


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  130 bits (475),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 148/232 (64%), Gaps = 5/232 (2%)

Query  45   APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGAHN  104
            AP    +++EGETGTGK+ LAR+IH+ S R G +VA++C+A++ + AE+ELFG  +GA  
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  105  GPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVRLVT  164
            G+  SRAG + +++ GTLYLDEI  +PL LQA+LL+ LE R + R+G+ + +P ++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  165  ATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFIGVYAQRLDLPVP  224
            AT   L++ V  GKF  +L   L+  ++ LP LR R +++ +L E F+   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  225  AIGVETQRVLESYPWPGNIRELENVV-HFAL----LVSDKEEILPQHLNFGG  271
              +      L S  WPGNIREL     +F L    L +D +  L  ++++ G
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

56) PAM18_1008 in NC_017548


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  130 bits (476),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 148/232 (64%), Gaps = 5/232 (2%)

Query  45   APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGAHN  104
            AP    +++EGETGTGK+ LAR+IH+ S R G +VA++C+A++ + AE+ELFG  +GA  
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  105  GPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVRLVT  164
            G+  SRAG + +++ GTLYLDEI  +PL LQA+LL+ LE R + R+G+ + +P ++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  165  ATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFVGVYAQRLDLPVP  224
            AT   L++ V  GKF  +L   L+  ++ LP LR R +++ +L E FV   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  225  TIGVETQRVLESYPWPGNIRELENVV-HFAL----LVSDKEEILPQHLNFGG  271
              +      L S  WPGNIREL     +F L    L +D +  L  ++++ G
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

57) NCGM2_5127 in NC_017549


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  130 bits (475),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 149/232 (65%), Gaps = 5/232 (2%)

Query  45   APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGAHN  104
            AP    +++EGETGTGK+ LAR+IH+ S R G +VA++C+A++ + AE+ELFG  +GA  
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  105  GPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVRLVT  164
            G+  SRAG + +++ GTLYLDEI+ +PL LQA+LL+ LE R + R+G+ + +P ++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  165  ATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFIGVYAQRLDLPVP  224
            AT   L++ V  GKF  +L   L+  ++ LP LR R +++ +L E F+   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  225  AIGVETQRVLESYPWPGNIRELENVV-HFAL----LVSDKEEILPQHLNFGG  271
              +      L S  WPGNIREL     +F L    L +D +  L  ++++ G
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

58) M062_20795 in NC_021577


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  130 bits (476),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 148/232 (64%), Gaps = 5/232 (2%)

Query  45   APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGAHN  104
            AP    +++EGETGTGK+ LAR+IH+ S R G +VA++C+A++ + AE+ELFG  +GA  
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  105  GPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVRLVT  164
            G+  SRAG + +++ GTLYLDEI  +PL LQA+LL+ LE R + R+G+ + +P ++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  165  ATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFVGVYAQRLDLPVP  224
            AT   L++ V  GKF  +L   L+  ++ LP LR R +++ +L E FV   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  225  AIGVETQRVLESYPWPGNIRELENVV-HFAL----LVSDKEEILPQHLNFGG  271
              +      L S  WPGNIREL     +F L    L +D +  L  ++++ G
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

59) PA14_13000 in NC_008463


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  130 bits (475),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 149/232 (65%), Gaps = 5/232 (2%)

Query  45   APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGAHN  104
            AP    +++EGETGTGK+ LAR+IH+ S R G +VA++C+A++ + AE+ELFG  +GA  
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  105  GPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVRLVT  164
            G+  SRAG + +++ GTLYLDEI+ +PL LQA+LL+ LE R + R+G+ + +P ++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  165  ATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFIGVYAQRLDLPVP  224
            AT   L++ V  GKF  +L   L+  ++ LP LR R +++ +L E F+   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  225  AIGVETQRVLESYPWPGNIRELENVV-HFAL----LVSDKEEILPQHLNFGG  271
              +      L S  WPGNIREL     +F L    L +D +  L  ++++ G
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

60) PADK2_04665 in NC_018080


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  130 bits (477),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 148/232 (64%), Gaps = 5/232 (2%)

Query  45   APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGAHN  104
            AP    +++EGETGTGK+ LAR+IH+ S R G +VA++C+A++ + AE+ELFG  +GA  
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  105  GPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVRLVT  164
            G+  SRAG + +++ GTLYLDEI  +PL LQA+LL+ LE R + R+G+ + +P ++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  165  ATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFVGVYAQRLDLPVP  224
            AT   L++ V  GKF  +L   L+  ++ LP LR R +++ +L E FV   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  225  AIGVETQRILESYPWPGNIRELENVV-HFAL----LVSDKEEILPQHLNFGG  271
              +      L S  WPGNIREL     +F L    L +D +  L  ++++ G
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

61) G655_05020 in NC_020912


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  129 bits (472),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 149/232 (65%), Gaps = 5/232 (2%)

Query  45   APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGAHN  104
            AP    +++EGETGTGK+ LAR+IH+ S R G +VA++C+A++ + AE+ELFG  +GA  
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  105  GPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVRLVT  164
            G+  SRAG + +++ GTLYLDEI+ +PL LQA+LL+ LE R + R+G+ + +P ++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  165  ATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFMGVYAQRLDLPVP  224
            AT   L++ V  GKF  +L   L+  ++ LP LR R +++ +L E F+   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  225  AIGVETQRVLESYPWPGNIRELENVV-HFAL----LVSDKEEILPQHLNFGG  271
              +      L S  WPGNIREL     +F L    L +D +  L  ++++ G
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHLKG  263

62) PCA10_01930 in NC_021499


> DQ168848|51|G51|76574837|ABA47311.1|Pseudomonas_cichorii_83-1|-|50652..51590|hrpRS|-|HrpRS
Length=312

 Score =  124 bits (455),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 151/230 (66%), Gaps = 5/230 (2%)

Query  46   APGDLPVLIQGETGTGKELLARQIHRSSDRPGLFVAVSCSAISKSYAEAELFGHTPGAYN  105
            AP ++ ++++GETGTGK+ LAR+IH+ S+R G +VA++C+A++   AE+ELFG  +GAY 
Sbjct  32   APLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAESELFGVMAGAYT  91

Query  106  GAASSRAGWFGSANGGTLYLDEIGDlplplqakllaalESREVTRVGAQQPTPVDVRLVA  165
            GA+ SRAG + +++ GTLYLDEI+ +PL LQAKLL  LE R + R+G+ +  P+++R++ 
Sbjct  92   GASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIV  151

Query  166  ATSIDLAEAVRVGKFNARLYQYLNEGRVELPPLRERPDDILPLAEYFLGIYAQRLDLPLP  225
            AT   L   V  GKF   L+  LN  +++LP LR R D++ +L E F+   A++ + P+P
Sbjct  152  ATQTPLEKLVEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIP  211

Query  226  LISAAAQAVLEAYPWPGNTRELENSV-HFAL----LVSEGDEILPQHLNL  270
               ++    L +  WPGN REL  +  +F L    L ++ D  L  +++L
Sbjct  212  QRDPSVLNRLLSHRWPGNIRELKCAAERFVLGMSPLGTDEDPNLEGNIHL  261