Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
HrpS type III protein secretion system regulatory protein |
NC_014500 (Dickeya dadantii 3937) |
2e-91 |
63 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
3e-89 |
65 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_012912 (Dickeya zeae Ech1591) |
3e-89 |
62 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_013592 (Dickeya dadantii Ech586) |
6e-89 |
65 |
|
HrpS |
NC_018525 (Pectobacterium carotovorum PCC21) |
8e-87 |
60 |
|
sigma-54-dependent enhancer-binding protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
2e-85 |
62 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_012917 (Pectobacterium carotovorum PC1) |
1e-84 |
62 |
|
Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster) |
NC_010694 (Erwinia tasmaniensis Et1/99) |
3e-82 |
60 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein |
NC_017445 (Erwinia sp. Ejp617) |
4e-82 |
59 |
|
Fis family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
1e-81 |
57 |
|
Sigma-54-dependent enhancer-binding protein HrpS |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
1e-81 |
59 |
|
Hrp/hrc secretion/translocation pathway protein HrpS |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
1e-81 |
59 |
|
protein HrpS |
NC_016830 (Pseudomonas fluorescens F113) |
4e-81 |
57 |
|
type III transcriptional regulator HrpR |
NC_004578 (Pseudomonas syringae DC3000) |
7e-81 |
60 |
|
type III transcriptional regulator HrpR |
NC_005773 (Pseudomonas syringae 1448A) |
1e-80 |
58 |
|
type III transcriptional regulator HrpR |
NC_007005 (Pseudomonas syringae B728a) |
2e-80 |
55 |
|
sigma-54-dependent enhancer-binding protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
5e-80 |
59 |
|
sigma-54-dependent enhancer-binding protein HrpS |
NC_013961 (Erwinia amylovora CFBP1430) |
5e-80 |
59 |
|
type III secretion system transcriptional regulator RspS |
NC_017911 (Pseudomonas fluorescens A506) |
3e-79 |
56 |
|
sigma-54 interacting regulator |
NC_020064 (Serratia marcescens FGI94) |
2e-78 |
62 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
3e-77 |
57 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
8e-77 |
58 |
|
type III transcriptional regulator HrpS |
NC_004578 (Pseudomonas syringae DC3000) |
4e-76 |
58 |
|
type III transcriptional regulator HrpS |
NC_007005 (Pseudomonas syringae B728a) |
1e-75 |
60 |
|
type III transcriptional regulator HrpS |
NC_005773 (Pseudomonas syringae 1448A) |
3e-71 |
58 |
|
putative type III secretion system, regulatory protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
1e-70 |
55 |
|
type III secretion system transcriptional regulator RspS |
NC_020209 (Pseudomonas poae RE*1-1-14) |
3e-64 |
56 |
|
Transcriptional regulatory protein (zraR) |
NC_012811 (Methylobacterium extorquens AM1) |
7e-48 |
41 |
|
sigma-54 dependent DNA-binding response regulator |
NC_002977 (Methylococcus capsulatus Bath) |
6e-38 |
41 |
|
DNA-binding transcriptional activator |
NC_016617 (Azospirillum brasilense Sp245) |
4e-36 |
43 |
|
hypothetical protein |
NC_013422 (Halothiobacillus neapolitanus c2) |
3e-35 |
42 |
|
Psp operon transcriptional activator PspF |
NC_017531 (Pantoea ananatis AJ13355) |
3e-35 |
42 |
|
Psp operon transcriptional activator PspF |
NC_016816 (Pantoea ananatis LMG 5342) |
3e-35 |
42 |
|
Psp operon transcriptional activator PspF |
NC_017554 (Pantoea ananatis PA13) |
3e-35 |
42 |
|
psp operon transcriptional activator PspF |
NC_016818 (Rahnella aquatilis CIP 78.65) |
2e-34 |
42 |
|
phage shock protein operon transcriptional activator |
NC_012880 (Dickeya dadantii Ech703) |
3e-34 |
41 |
|
DNA-binding transcriptional activator |
NC_014500 (Dickeya dadantii 3937) |
6e-34 |
42 |
|
phage shock protein operon transcriptional activator |
NC_017047 (Rahnella aquatilis HX2) |
6e-34 |
41 |
|
Fis family transcriptional regulator |
NC_015061 (Rahnella sp. Y9602) |
6e-34 |
41 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_014837 (Pantoea sp. At-9b) |
7e-34 |
41 |
|
sigma54 specific transcriptional activator, PspF, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
1e-33 |
42 |
|
Psp operon transcriptional activator |
NC_014306 (Erwinia billingiae Eb661) |
1e-33 |
41 |
|
transcriptional regulator |
NC_021741 (Serratia liquefaciens ATCC 27592) |
1e-33 |
41 |
|
psp operon transcriptional activator PspF |
NC_020064 (Serratia marcescens FGI94) |
3e-33 |
41 |
|
psp operon transcriptional activator |
NC_021591 (Serratia odorifera 4Rx13) |
3e-33 |
41 |
|
transcriptional regulator |
NC_021659 (Serratia plymuthica S13) |
4e-33 |
41 |
|
Fis family transcriptional regulator |
NC_015567 (Serratia plymuthica AS9) |
8e-33 |
41 |
|
Fis family sigma-54 specific transcriptional activator PspF |
NC_015566 (Serratia sp. AS12) |
8e-33 |
41 |
|
Fis family sigma-54 specific transcriptional activator PspF |
NC_017573 (Serratia sp. AS13) |
8e-33 |
41 |
|
flagellar regulatory protein fleQ |
NC_015850 (Acidithiobacillus caldus SM-1) |
1e-32 |
43 |
|
DNA-binding transcriptional activator |
NC_020211 (Serratia marcescens WW4) |
1e-32 |
41 |
|
phage shock protein operon transcriptional activator |
NC_012912 (Dickeya zeae Ech1591) |
9e-33 |
41 |
|
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
NC_016633 (Sphaerochaeta pleomorpha Grapes) |
4e-32 |
41 |
|
putative transcriptional regulator |
NC_011770 (Pseudomonas aeruginosa LESB58) |
1e-31 |
41 |
|
putative transcriptional regulator |
NC_017548 (Pseudomonas aeruginosa M18) |
1e-31 |
41 |
|
transcriptional regulator |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
1e-31 |
41 |
|
Fis family transcriptional regulator |
NC_021577 (Pseudomonas aeruginosa RP73) |
1e-31 |
41 |
|
transcriptional regulator |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
1e-31 |
41 |
|
transcriptional regulator |
NC_018080 (Pseudomonas aeruginosa DK2) |
8e-32 |
41 |
|
putative transcriptional regulator |
NC_020912 (Pseudomonas aeruginosa B136-33) |
2e-31 |
41 |
|
hypothetical protein |
NC_021499 (Pseudomonas resinovorans NBRC 106553) |
4e-30 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='DQ168848' AND ph.id_pai_orf='51' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc