Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
conjugal transfer protein |
NC_010554 (Proteus mirabilis HI4320) |
3e-97 |
100 |
|
type IV B pilus protein |
NC_009832 (Serratia proteamaculans 568) |
4e-40 |
44 |
|
type IV B pilus protein |
NC_009832 (Serratia proteamaculans 568) |
6e-40 |
45 |
|
hypothetical protein |
NC_011993 (Escherichia coli LF82) |
4e-39 |
50 |
|
lipoprotein |
NC_017634 (Escherichia coli NRG 857C) |
4e-39 |
50 |
|
type IV B pilus protein |
NC_015567 (Serratia plymuthica AS9) |
5e-39 |
45 |
|
type IV B pilus protein |
NC_015566 (Serratia sp. AS12) |
5e-39 |
45 |
|
type IV B pilus protein |
NC_017573 (Serratia sp. AS13) |
5e-39 |
45 |
|
hypothetical protein |
NC_014029 (Yersinia pestis Z176003) |
1e-38 |
54 |
|
PilL protein (fragment) |
NC_013892 (Xenorhabdus bovienii SS-2004) |
3e-38 |
49 |
|
type IV B pilus protein |
NC_021818 (Salmonella enterica CFSAN002050) |
4e-37 |
53 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
3e-36 |
49 |
|
pilL protein (fragment) |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
2e-35 |
46 |
|
PilL protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
2e-34 |
47 |
|
type IV B pilus protein |
NC_016845 (Klebsiella pneumoniae HS11286) |
3e-34 |
49 |
|
type IV B pilus protein |
NC_022082 (Klebsiella pneumoniae JM45) |
3e-34 |
49 |
|
PilL protein (fragment) |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
6e-34 |
49 |
|
lipoprotein |
NC_010554 (Proteus mirabilis HI4320) |
5e-30 |
43 |
|
hypothetical protein |
NC_016830 (Pseudomonas fluorescens F113) |
8e-27 |
41 |
|
PilL protein |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
9e-27 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_010554_P1' AND ph.id_pai_orf='50' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc