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Homologs of escJ gene of JQ747540

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) escJ
( YP_003236093.1 )

T3SS structure protein EscJ

NC_013364
(Escherichia coli 11128)

8e-61

2) escJ
( YP_003501879.1 )

EscJ

NC_013941
(Escherichia coli CB9615)

8e-61

3) escJ
( YP_002331415.1 )

T3SS structure protein EscJ

NC_011601
(Escherichia coli E2348/69)

8e-61

4) ECH74115_5066
( YP_002273170.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_011353
(Escherichia coli EC4115)

8e-61

5) escJ
( NP_290273.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

8e-61

6) ECO55CA74_21245
( YP_006161354.1 )

protein EscJ

NC_017656
(Escherichia coli RM12579)

8e-61

7) ECs4573
( NP_312600.1 )

EscJ

NC_002695
(Escherichia coli Sakai)

8e-61

8) escJ
( YP_003080485.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

8e-61

9) CDCO157_4308
( YP_006315173.1 )

protein EscJ

NC_017906
(Escherichia coli Xuzhou21)

8e-61

10) escJ
( YP_003232148.1 )

T3SS structure protein EscJ

NC_013361
(Escherichia coli 11368)

5e-60

11) escJ
( YP_003223480.1 )

T3SS structure protein EscJ

NC_013353
(Escherichia coli 12009)

5e-60

12) escJ
( YP_003366507.1 )

T3SS structural protein EscJ

NC_013716
(Citrobacter rodentium ICC168)

6e-60

13) YE105_C0327
( YP_004296528.1 )

type III secretion system apparatus lipoprotein

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-36

14) Y11_35351
( YP_006007034.1 )

secretion system apparatus protein SsaJ

NC_017564
(Yersinia enterocolitica Y11)

2e-36

15) ETAC_04110
( YP_007628313.1 )

protein EsaJ

NC_020796
(Edwardsiella tarda C07-087)

7e-35

16) esaJ
( YP_003294913.1 )

type III secretion system apparatus lipoprotein

NC_013508
(Edwardsiella tarda EIB202)

7e-35

17) esaJ
( YP_005698412.1 )

protein EsaJ

NC_017309
(Edwardsiella tarda FL6-60)

7e-35

18) NT01EI_0936
( YP_002932384.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family, putative

NC_012779
(Edwardsiella ictaluri 93-146)

7e-34

19) Sbal195_2266
( YP_001554694.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009997
(Shewanella baltica OS195)

7e-34

20) Sbal678_2276
( YP_005273483.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_016901
(Shewanella baltica OS678)

7e-34

21) Sbal175_2403
( YP_006020960.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_017571
(Shewanella baltica BA175)

1e-33

22) SVI_2241
( YP_003556990.1 )

type III secretion system apparatus lipoprotein

NC_014012
(Shewanella violacea DSS12)

2e-33

23) Sbal117_2078
( YP_006037309.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_017579
(Shewanella baltica OS117)

2e-33

24) Sbal_1962
( YP_001050335.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009052
(Shewanella baltica OS155)

2e-33

• Sequence Alignments

1) escJ in NC_013364


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

2) escJ in NC_011601


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

3) ECH74115_5066 in NC_011353


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

4) escJ in NC_002655


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

5) ECs4573 in NC_002695


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

6) escJ in NC_013008


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

7) escJ in NC_013941


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

8) ECO55CA74_21245 in NC_017656


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

9) CDCO157_4308 in NC_017906


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  225 bits (840),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 122/187 (66%), Positives = 169/187 (91%), Gaps = 0/187 (0%)

Query  1    MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLS  60
            MK+ IK++ +L+ + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++++
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

10) escJ in NC_013353


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  223 bits (830),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 121/187 (65%), Positives = 167/187 (90%), Gaps = 0/187 (0%)

Query  1    MRKYIKNTFLFVFICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNVTIS  60
            M++ IK+  ++  + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++I+
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

11) escJ in NC_013361


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  223 bits (830),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 121/187 (65%), Positives = 167/187 (90%), Gaps = 0/187 (0%)

Query  1    MRKYIKNTFLFVFICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNVTIS  60
            M++ IK+  ++  + L  +C+E LY+GL E+EANQMQALLLSN++NVSKE +K+G ++I+
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+LVKNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

12) escJ in NC_013716


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  223 bits (830),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 121/187 (65%), Positives = 167/187 (90%), Gaps = 0/187 (0%)

Query  1    MKKRIKNTFLLIAICLTVACKEQLYTGLTEKEANLMQALLLSNDVNVSKEMDKSGNVTIS  60
            MK++IK+  +L  + L  +C+E LY+GL E+EAN MQALLLSN++NVSKE +K+G ++I+
Sbjct  1    MKNKIKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISIN  60

Query  61   VEKEDFVRAITILNNNGFPKKKFADIEVIFPPSQLVTSPSQENAKINYLKEQDIERLLSK  120
            V+K+DFV+AI+ILNN+G+P+KK  +IE IFPPSQLV+SP+QE+AKINY+KEQ++ERLLSK
Sbjct  61   VDKNDFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSK  120

Query  121  IPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLIKNSVDDLKLENISV  180
            IPGVIDCS+ LN+N++   PSSA+VL+ISSPE+NLAP++ QIK+L+KNS+DDLK+ENISV
Sbjct  121  IPGVIDCSIVLNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  181  VIKSSSG  187
            VIK+++G
Sbjct  181  VIKNTAG  187

13) YE105_C0327 in NC_015224


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  144 bits (531),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 77/172 (45%), Positives = 128/172 (75%), Gaps = 4/172 (2%)

Query  19   GCGMELYSGLSEGEANQMLALLMLHQIKAEKQSEKGGTVALNVDKSQFINAVELLRQHGF  78
            GC   LYSGL E EANQM ALL+ ++I+  K++EK+G +++NVDK++F++A+ +L +HG+
Sbjct  19   GCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISINVDKNDFVKAISILNNHGL  78

Query  79   PRQRFASVDELFPSNQLVTSPGQEQAKMVYLKEQQLESMLSHMDGVIQADVTIAMPAPTD  138
            PR++  +++ +FP++QLV+SP QE+AK+ Y+KEQ++E +LS + GVI  D +I +    +
Sbjct  79   PRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVI--DCSIVLNINKE  136

Query  139  GKSSVPHAASVFIKYSPEVNLLSYQPQIKNLIRDGIPGIDFSQISVVMQPTN  190
            G   VP +ASV+I  SPE+NL +   QIK+L++++I ++   +ISVV++ T 
Sbjct  137  G--DVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISVVIKNTA  186

14) Y11_35351 in NC_017564


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  144 bits (531),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 77/172 (45%), Positives = 128/172 (75%), Gaps = 4/172 (2%)

Query  19   GCGMELYSGLSEGEANQMLALLMLHQIKAEKQSEKGGTVALNVDKSQFINAVELLRQHGF  78
            GC   LYSGL E EANQM ALL+ ++I+  K++EK+G +++NVDK++F++A+ +L +HG+
Sbjct  19   GCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISINVDKNDFVKAISILNNHGL  78

Query  79   PRQRFASVDELFPSNQLVTSPGQEQAKMVYLKEQQLESMLSHMDGVIQADVTIAMPAPTD  138
            PR++  +++ +FP++QLV+SP QE+AK+ Y+KEQ++E +LS + GVI  D +I +    +
Sbjct  79   PRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVI--DCSIVLNINKE  136

Query  139  GKSSVPHAASVFIKYSPEVNLLSYQPQIKNLIRDGIPGIDFSQISVVMQPTN  190
            G   VP +ASV+I  SPE+NL +   QIK+L++++I ++   +ISVV++ T 
Sbjct  137  G--DVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISVVIKNTA  186

15) ETAC_04110 in NC_020796


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 134/185 (73%), Gaps = 5/185 (2%)

Query  4    IPWILIFGLLPLLSGCKSELYSKLDEKEANQMMALLIYNNIPADKRVEKEG-VTLLVERE  62
            I  ++I+++L L+SGC+  LYS LDE+EANQM ALL+ NNI   K  EK G +++ V+++
Sbjct  5    IKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISINVDKN  64

Query  63   RFVDAVEVLRQNGLPRRKTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLGSMDGV  122
             FV A+ +L ++GLPR+K V ++ +FP++QLV+SP QE+AK+NY+K Q++E++L+ + GV
Sbjct  65   DFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGV  124

Query  123  INAEVSVAEPRVIVGEAPPQASAAVFIKYSPEINLPAREAEIRALIHNGIPGLAPDRISV  182
            I+  + +   +   G+ P  +SA+V+I  SPEINL++   +I++L+ N+I +L  + ISV
Sbjct  125  IDCSIVLNINK--EGDVP--SSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  183  TLQRA  187
             ++ +
Sbjct  181  VIKNT  185

16) esaJ in NC_013508


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 134/185 (73%), Gaps = 5/185 (2%)

Query  4    IPWILIFGLLPLLSGCKSELYSKLDEKEANQMMALLIYNNIPADKRVEKEG-VTLLVERE  62
            I  ++I+++L L+SGC+  LYS LDE+EANQM ALL+ NNI   K  EK G +++ V+++
Sbjct  5    IKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISINVDKN  64

Query  63   RFVDAVEVLRQNGLPRRKTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLGSMDGV  122
             FV A+ +L ++GLPR+K V ++ +FP++QLV+SP QE+AK+NY+K Q++E++L+ + GV
Sbjct  65   DFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGV  124

Query  123  INAEVSVAEPRVIVGEAPPQASAAVFIKYSPEINLPAREAEIRALIHNGIPGLAPDRISV  182
            I+  + +   +   G+ P  +SA+V+I  SPEINL++   +I++L+ N+I +L  + ISV
Sbjct  125  IDCSIVLNINK--EGDVP--SSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  183  TLQRA  187
             ++ +
Sbjct  181  VIKNT  185

17) esaJ in NC_017309


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  140 bits (513),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 134/185 (73%), Gaps = 5/185 (2%)

Query  4    IPWILIFGLLPLLSGCKSELYSKLDEKEANQMMALLIYNNIPADKRVEKEG-VTLLVERE  62
            I  ++I+++L L+SGC+  LYS LDE+EANQM ALL+ NNI   K  EK G +++ V+++
Sbjct  5    IKKMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISINVDKN  64

Query  63   RFVDAVEVLRQNGLPRRKTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLGSMDGV  122
             FV A+ +L ++GLPR+K V ++ +FP++QLV+SP QE+AK+NY+K Q++E++L+ + GV
Sbjct  65   DFVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGV  124

Query  123  INAEVSVAEPRVIVGEAPPQASAAVFIKYSPEINLPAREAEIRALIHNGIPGLAPDRISV  182
            I+  + +   +   G+ P  +SA+V+I  SPEINL++   +I++L+ N+I +L  + ISV
Sbjct  125  IDCSIVLNINK--EGDVP--SSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  183  TLQRA  187
             ++ +
Sbjct  181  VIKNT  185

18) NT01EI_0936 in NC_012779


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  136 bits (500),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 77/182 (43%), Positives = 134/182 (74%), Gaps = 5/182 (2%)

Query  7    ILLFSMLPLLSGCKSELYSKLDEKEANQMMALLIYNKIPADKRMEK-DGVTLLVDQDRFV  65
            ++++SML L+SGC+  LYS LDE+EANQM ALL+ N+I   K  EK +G+++ VD++ FV
Sbjct  8    MMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKENEKAGGISINVDKNDFV  67

Query  66   DAVEVLRQNGLPRPQTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLSSMDGVINA  125
             A+ +L ++GLPR + V ++ +FP++QLV+SP QE+AK+NY+K Q++E++LS + GVI+ 
Sbjct  68   KAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVIDC  127

Query  126  EVSVAEPRAIVGEAPPLASAAVFIKYSPDVNLPAREAEIRALINNGIPGLAPDRISVTLQ  185
             + +   +   G+ P  +SA+V+I  SP++NL++   +I++L++N+I +L  + ISV ++
Sbjct  128  SIVLNINKE--GDVP--SSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISVVIK  183

Query  186  RA  187
             +
Sbjct  184  NT  185

19) Sbal195_2266 in NC_009997


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  136 bits (500),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 78/186 (42%), Positives = 135/186 (73%), Gaps = 6/186 (3%)

Query  5    KWSILLLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIDKDQ  64
            K  IL +++ ++GC+  LY +L ++EANQM ALL+ N+I+ S E ++K+G +S+++DK++
Sbjct  7    KMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKE-NEKAGGISINVDKND  65

Query  65   FINAVELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVI  124
            F++A+ +L ++G+P+    NIE +FP++QLV+SP+QE+AK+ Y+KEQ++ER LS + GVI
Sbjct  66   FVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVI  125

Query  125  SARVSIAEPAPDSGRQIALTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISV  184
               + +     +  ++  +  SASV I  SP+ NL+ T NQIKSLV+N++ +L  +NISV
Sbjct  126  DCSIVL-----NINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  185  FLQAAS  190
             ++ ++
Sbjct  181  VIKNTA  186

20) Sbal678_2276 in NC_016901


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  136 bits (500),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 78/186 (42%), Positives = 135/186 (73%), Gaps = 6/186 (3%)

Query  5    KWSILLLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIDKDQ  64
            K  IL +++ ++GC+  LY +L ++EANQM ALL+ N+I+ S E ++K+G +S+++DK++
Sbjct  7    KMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKE-NEKAGGISINVDKND  65

Query  65   FINAVELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVI  124
            F++A+ +L ++G+P+    NIE +FP++QLV+SP+QE+AK+ Y+KEQ++ER LS + GVI
Sbjct  66   FVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVI  125

Query  125  SARVSIAEPAPDSGRQIALTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISV  184
               + +     +  ++  +  SASV I  SP+ NL+ T NQIKSLV+N++ +L  +NISV
Sbjct  126  DCSIVL-----NINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  185  FLQAAS  190
             ++ ++
Sbjct  181  VIKNTA  186

21) Sbal175_2403 in NC_017571


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  135 bits (497),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 78/186 (42%), Positives = 135/186 (73%), Gaps = 6/186 (3%)

Query  5    KWSILLLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIEKDQ  64
            K  IL +++ ++GC+  LY +L ++EANQM ALL+ N+I+ S E ++K+G +S++++K++
Sbjct  7    KMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKE-NEKAGGISINVDKND  65

Query  65   FINAVELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVI  124
            F++A+ +L ++G+P+    NIE +FP++QLV+SP+QE+AK+ Y+KEQ++ER LS + GVI
Sbjct  66   FVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVI  125

Query  125  SASVSIAEPAPDTGRQLAQTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISV  184
              S+ +     +  ++     SASV I  SP+ NL+ T NQIKSLV+N++ +L  +NISV
Sbjct  126  DCSIVL-----NINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  185  FLQAAS  190
             ++ ++
Sbjct  181  VIKNTA  186

22) SVI_2241 in NC_014012


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 74/183 (41%), Positives = 136/183 (75%), Gaps = 6/183 (3%)

Query  8    LLLLVILLSGCKVDLFRDLSQDDANQMVALLMLHHIDAASELDDKSGTITLKIDKDQFIN  67
            +L +++L+SGC+  L+ +L +++ANQM ALL+ ++I+ + E ++K+G I++++DK++F++
Sbjct  10   ILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKE-NEKAGGISINVDKNDFVK  68

Query  68   AVELLRQNGFPKPHYSSIEDLFPSGQLVTSPTQEEAKMNYLKEQQLERTLSTMDGVISAR  127
            A+ +L ++G+P+    +IE +FP++QLV+SPTQE+AK+NY+KEQ++ER LS + GVI   
Sbjct  69   AISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVIDCS  128

Query  128  VTIAEMELDPNRREPTDKSASVFIKYSPQANLSNAKNNIKKLIQNSVTGLSVDNISVYLQ  187
            +      L+ N+      SASV+I  SP+ NL+ + N+IK L++NS+ +L ++NISV ++
Sbjct  129  IV-----LNINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISVVIK  183

Query  188  ESN  190
            ++ 
Sbjct  184  NTA  186

23) Sbal117_2078 in NC_017579


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 134/186 (73%), Gaps = 6/186 (3%)

Query  5    KWSILLLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIEKDQ  64
            K  IL +++ ++GC+  LY +L ++EANQM ALL+ N+I+ S E ++K+G +S++++K++
Sbjct  7    KMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKE-NEKAGGISINVDKND  65

Query  65   FINAVELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVI  124
            F++A+ +L ++G+P+    NIE +FP++QLV+SP+QE+AK+ Y+KEQ++ER LS + GVI
Sbjct  66   FVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVI  125

Query  125  SARVSIAEPAPDTGRQLAQTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISV  184
               + +     +  ++     SASV I  SP+ NL+ T NQIKSLV+N++ +L  +NISV
Sbjct  126  DCSIVL-----NINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  185  FLQAAS  190
             ++ ++
Sbjct  181  VIKNTA  186

24) Sbal_1962 in NC_009052


> JQ747540|50|G45|397782032|AFO66410.1|Salmonella_enterica_subsp._salamae_serovar_Sofia_S1635|-|41794..42357|escJ|SESS1635_03857|putative 
LEE-encoded type III secretion system factor
Length=187

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 134/186 (73%), Gaps = 6/186 (3%)

Query  5    KWSILLLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIEKDQ  64
            K  IL +++ ++GC+  LY +L ++EANQM ALL+ N+I+ S E ++K+G +S++++K++
Sbjct  7    KMMILSMLLLISGCNETLYSGLDENEANQMQALLLSNNINVSKE-NEKAGGISINVDKND  65

Query  65   FINAVELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVI  124
            F++A+ +L ++G+P+    NIE +FP++QLV+SP+QE+AK+ Y+KEQ++ER LS + GVI
Sbjct  66   FVKAISILNNHGLPRKKHVNIEAIFPPSQLVSSPTQEHAKINYIKEQNVERLLSKIPGVI  125

Query  125  SARVSIAEPAPDTGRQLAQTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISV  184
               + +     +  ++     SASV I  SP+ NL+ T NQIKSLV+N++ +L  +NISV
Sbjct  126  DCSIVL-----NINKEGDVPSSASVLIISSPEINLAPTINQIKSLVKNSIDDLKMENISV  180

Query  185  FLQAAS  190
             ++ ++
Sbjct  181  VIKNTA  186