Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of HMPREF0351_12129 gene of NC_017960_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EFAU004_02133
( YP_005355335.1 )

hypothetical protein

NC_017022
(Enterococcus faecium Aus0004)

1e-04

100

2) HMPREF0351_12129
( YP_006376735.1 )

hypothetical protein

NC_017960
(Enterococcus faecium DO)

1e-04

100

3) PECL_598
( YP_005004572.1 )

hypothetical protein

NC_016605
(Pediococcus claussenii ATCC BAA-344)

1.6

• Sequence Alignments

1) EFAU004_02133 in NC_017022


> NC_017960_P1|5|G5|389869312|YP_006376735.1|Enterococcus_faecium_DO|-|3358..3543|-|HMPREF0351_12129|hypothetical 
protein
Length=61

 Score = 40.3 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  1   MNFIQVKNFLSNYIHTvllllglvcvlvAITLLTNvyygllalgivligvavMLNTEQKG  60
           MNFIQVKNFLSNYIHTVLLLLGLVCVLVAITLLTNVYYGLLALGIVLIGVAVMLNTEQKG
Sbjct  1   MNFIQVKNFLSNYIHTVLLLLGLVCVLVAITLLTNVYYGLLALGIVLIGVAVMLNTEQKG  60

Query  61  G  61
           G
Sbjct  61  G  61

2) HMPREF0351_12129 in NC_017960


> NC_017960_P1|5|G5|389869312|YP_006376735.1|Enterococcus_faecium_DO|-|3358..3543|-|HMPREF0351_12129|hypothetical 
protein
Length=61

 Score = 40.3 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  1   MNFIQVKNFLSNYIHTvllllglvcvlvAITLLTNvyygllalgivligvavMLNTEQKG  60
           MNFIQVKNFLSNYIHTVLLLLGLVCVLVAITLLTNVYYGLLALGIVLIGVAVMLNTEQKG
Sbjct  1   MNFIQVKNFLSNYIHTVLLLLGLVCVLVAITLLTNVYYGLLALGIVLIGVAVMLNTEQKG  60

Query  61  G  61
           G
Sbjct  61  G  61

3) PECL_598 in NC_016605


> NC_017960_P1|5|G5|389869312|YP_006376735.1|Enterococcus_faecium_DO|-|3358..3543|-|HMPREF0351_12129|hypothetical 
protein
Length=61

 Score = 26.4 bits (80),  Expect = 1.6, Method: Compositional matrix adjust.
 Identities = 26/58 (45%), Positives = 45/58 (78%), Gaps = 0/58 (0%)

Query  1   MKVKNFLSKYIQtlllligliattagVWLIFSYKVGIIMIGIVFVLLAFMINQEKKGG  58
           ++VKNFLS+YI+T+LLL+GL+    ++ L+ +   G++ +GIV++ +A M+N E+KGG
Sbjct  4   IQVKNFLSNYIHTVLLLLGLVCVLVAITLLTNVYYGLLALGIVLIGVAVMLNTEQKGG  61