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PAthogenisity Island DataBase (PAI DB)

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Homologs of XC_3005 gene of NC_007086_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) XC_3005
( YP_244073.1 )

HrpB7 protein

NC_007086
(Xanthomonas campestris 8004)

2e-41

100

2) hrpB7
( NP_636611.1 )

HrpB7 protein

NC_003902
(Xanthomonas campestris ATCC 33913)

2e-41

100

3) hrpB7
( YP_001904473.1 )

HrpB7 protein

NC_010688
(Xanthomonas campestris B100)

2e-41

100

4) hrpB7
( YP_005636506.1 )

type III secretion protein HrpB7

NC_017271
(Xanthomonas campestris 756C)

2e-36

5) hrpB7
( YP_362164.1 )

HrpB7 protein

NC_007508
(Xanthomonas campestris 85-10)

2e-22

• Sequence Alignments

1) XC_3005 in NC_007086


> NC_007086_P1|5|G5|66769311|YP_244073.1|Xanthomonas_campestris_pv._campestris_str._8004|-|4216..4725|-|XC_3005|HrpB7 
protein
Length=169

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%)

Query  1    MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRlaafdaa  60
            MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAA
Sbjct  1    MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAA  60

Query  61   ladtagagEPIGIEAILQHQRFRAVLEERCGaaeqalvaatqalqraHDEVATVQQTVSR  120
            LADTAGAGEPIGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSR
Sbjct  61   LADTAGAGEPIGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSR  120

Query  121  LEAQAQVYaekaararrawqaqreaaeeedaieaLIGLRLHRAARGVGP  169
            LEAQAQVYAEKAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP
Sbjct  121  LEAQAQVYAEKAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP  169

2) hrpB7 in NC_003902


> NC_007086_P1|5|G5|66769311|YP_244073.1|Xanthomonas_campestris_pv._campestris_str._8004|-|4216..4725|-|XC_3005|HrpB7 
protein
Length=169

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%)

Query  1    MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRlaafdaa  60
            MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAA
Sbjct  1    MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAA  60

Query  61   ladtagagEPIGIEAILQHQRFRAVLEERCGaaeqalvaatqalqraHDEVATVQQTVSR  120
            LADTAGAGEPIGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSR
Sbjct  61   LADTAGAGEPIGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSR  120

Query  121  LEAQAQVYaekaararrawqaqreaaeeedaieaLIGLRLHRAARGVGP  169
            LEAQAQVYAEKAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP
Sbjct  121  LEAQAQVYAEKAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP  169

3) hrpB7 in NC_010688


> NC_007086_P1|5|G5|66769311|YP_244073.1|Xanthomonas_campestris_pv._campestris_str._8004|-|4216..4725|-|XC_3005|HrpB7 
protein
Length=169

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%)

Query  1    MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRlaafdaa  60
            MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAA
Sbjct  1    MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAA  60

Query  61   ladtagagEPIGIEAILQHQRFRAVLEERCGaaeqalvaatqalqraHDEVATVQQTVSR  120
            LADTAGAGEPIGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSR
Sbjct  61   LADTAGAGEPIGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSR  120

Query  121  LEAQAQVYaekaararrawqaqreaaeeedaieaLIGLRLHRAARGVGP  169
            LEAQAQVYAEKAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP
Sbjct  121  LEAQAQVYAEKAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP  169

4) hrpB7 in NC_017271


> NC_007086_P1|5|G5|66769311|YP_244073.1|Xanthomonas_campestris_pv._campestris_str._8004|-|4216..4725|-|XC_3005|HrpB7 
protein
Length=169

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 158/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRlaafdaaladtagagEP  60
            +QQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAALADTAGAGEP
Sbjct  11   LQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAALADTAGAGEP  70

Query  61   IGIEAILQHQRFRAVLEERCGaaeqalvaatqalqraHDEVATVQQTVSRLEAQAQVYae  120
            IGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSRLEAQAQVYAE
Sbjct  71   IGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSRLEAQAQVYAE  130

Query  121  kaararrawqaqreaaeeedaieaLIGLRLHRAARGVGP  159
            KAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP
Sbjct  131  KAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVGP  169

5) hrpB7 in NC_007508


> NC_007086_P1|5|G5|66769311|YP_244073.1|Xanthomonas_campestris_pv._campestris_str._8004|-|4216..4725|-|XC_3005|HrpB7 
protein
Length=169

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 112/168 (67%), Positives = 142/168 (85%), Gaps = 0/168 (0%)

Query  1    MREPAYTWSVLHQLKARRCERMQERLSDCRRALEHCDRELARCRQEAEACTTRLANCDAA  60
            MRE   TW  L+QLK+RR +RMQ++LSDCRRALE+CD E A C Q+A+ACTTRLA  DAA
Sbjct  1    MRERVSTWRTLQQLKTRRYQRMQDHLSDCRRALEQCDGERASCSQQADACTTRLAAFDAA  60

Query  61   LMDKTGVGGSIDIDTILQHERFRTVLVETCraaeqaraaaDQSLHSARDElasvqqalsk  120
            L D +G G +I+I++ILQH+RFR+VL E C AAEQA  AA Q+L+ A+DE+A+VQQ++S+
Sbjct  61   LADTAGAGEPIGIEAILQHQRFRAVLEERCGAAEQALVAATQALQRAHDEVATVQQTVSR  120

Query  121  lqaqaqvYadkaasarrarqaqrdaaeeedaieaLVGLRSHRAAHGGA  168
            L+AQAQVYA+KAA ARRA+QAQR+AAEEEDAIEAL+GLR HRAA+G +
Sbjct  121  LEAQAQVYAEKAARARRAWQAQREAAEEEDAIEALIGLRLHRAARGVG  168