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PAthogenisity Island DataBase (PAI DB)

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Homologs of int gene of NC_003923_P7

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) int
( NP_646768.1 )

hypothetical protein

NC_003923
(Staphylococcus aureus MW2)

3e-41

100

2) NWMN_1936
( YP_001332970.1 )

truncated integrase

NC_009641
(Staphylococcus aureus Newman)

3e-40

3) SAVC_09015
( YP_005291390.1 )

hypothetical protein

NC_016912
(Staphylococcus aureus VC40)

3e-40

• Sequence Alignments

1) int in NC_003923


> NC_003923_P7|5|G5|21283680|NP_646768.1|Staphylococcus_aureus_subsp._aureus_MW2|+|2236..2583|int|MW1951|hypothetical 
protein
Length=115

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    MKWSDIDFENNTISItktyynpnnnkkkFQILPPKTESSIGKISVDPNVIKVLRDYKINV  60
            MKWSDIDFENNTISITKTYYNPNNNKKKFQILPPKTESSIGKISVDPNVIKVLRDYKINV
Sbjct  1    MKWSDIDFENNTISITKTYYNPNNNKKKFQILPPKTESSIGKISVDPNVIKVLRDYKINV  60

Query  61   QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH  115
            QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH
Sbjct  61   QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH  115

2) NWMN_1936 in NC_009641


> NC_003923_P7|5|G5|21283680|NP_646768.1|Staphylococcus_aureus_subsp._aureus_MW2|+|2236..2583|int|MW1951|hypothetical 
protein
Length=115

 Score =  158 bits (582),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 114/115 (99%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    MKWSDIDFENNTISItktyynpnnnkkkyQILPPKTESSIGKISVDPNVIKVLRDYKINV  60
            MKWSDIDFENNTISITKTYYNPNNNKKK+QILPPKTESSIGKISVDPNVIKVLRDYKINV
Sbjct  1    MKWSDIDFENNTISITKTYYNPNNNKKKFQILPPKTESSIGKISVDPNVIKVLRDYKINV  60

Query  61   QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH  115
            QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH
Sbjct  61   QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH  115

3) SAVC_09015 in NC_016912


> NC_003923_P7|5|G5|21283680|NP_646768.1|Staphylococcus_aureus_subsp._aureus_MW2|+|2236..2583|int|MW1951|hypothetical 
protein
Length=115

 Score =  158 bits (582),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 114/115 (99%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    MKWSDIDFENNTISItktyynpnnnkkkyQILPPKTESSIGKISVDPNVIKVLRDYKINV  60
            MKWSDIDFENNTISITKTYYNPNNNKKK+QILPPKTESSIGKISVDPNVIKVLRDYKINV
Sbjct  1    MKWSDIDFENNTISITKTYYNPNNNKKKFQILPPKTESSIGKISVDPNVIKVLRDYKINV  60

Query  61   QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH  115
            QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH
Sbjct  61   QNNWKNELYNDNHCNEKTINVDTNHYVTYQHTQKYLYALIQIHTLRIAHRIRCTH  115