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Homologs of YPO0259 gene of NC_003143_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YP_0412
( NP_991806.1 )

type III secretion apparatus

NC_005810
(Yersinia pestis 91001)

8e-29

100

2) A1122_03850
( YP_005520465.1 )

putative type III secretion apparatus

NC_017168
(Yersinia pestis A1122)

8e-29

100

3) YpAngola_A3941
( YP_001608239.1 )

type III secretion system protein YseE family

NC_010159
(Yersinia pestis Angola)

8e-29

100

4) YPA_4025
( YP_653931.1 )

putative type III secretion apparatus

NC_008150
(Yersinia pestis Antiqua)

8e-29

100

5) YPO0259
( YP_002345339.1 )

type III secretion apparatus

NC_003143
(Yersinia pestis CO92)

8e-29

100

6) YPC_0750
( YP_005622734.1 )

putative type III secretion apparatus

NC_017265
(Yersinia pestis Harbin 35)

8e-29

100

7) y0516
( NP_667854.1 )

type III secretion system component

NC_004088
(Yersinia pestis KIM)

8e-29

100

8) YPN_3410
( YP_649337.1 )

type III secretion apparatus

NC_008149
(Yersinia pestis Nepal516)

8e-29

100

9) YPDSF_3712
( YP_001165035.1 )

type III secretion apparatus

NC_009381
(Yersinia pestis Pestoides F)

8e-29

100

10) YPK_3915
( YP_001722633.1 )

YseE family type III secretion system protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

8e-29

100

11) YPTB0314
( YP_068860.1 )

hypothetical protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-28

12) YPTS_0338
( YP_001870784.1 )

YseE family type III secretion system protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

2e-28

13) YpsIP31758_3828
( YP_001402782.1 )

type III secretion system protein YseE family

NC_009708
(Yersinia pseudotuberculosis IP 31758)

3e-28

14) YE105_C0314
( YP_004296515.1 )

type III secretion apparatus

NC_015224
(Yersinia enterocolitica 105.5R(r))

4e-09

15) Y11_35221
( YP_006007021.1 )

putative type III secretion apparatus

NC_017564
(Yersinia enterocolitica Y11)

7e-09

• Sequence Alignments

1) A1122_03850 in NC_017168


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

2) YpAngola_A3941 in NC_010159


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

3) YPA_4025 in NC_008150


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

4) YPC_0750 in NC_017265


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

5) YP_0412 in NC_005810


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

6) YPO0259 in NC_003143


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

7) y0516 in NC_004088


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

8) YPN_3410 in NC_008149


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

9) YPDSF_3712 in NC_009381


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

10) YPK_3915 in NC_010465


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  120 bits (438),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

11) YPTB0314 in NC_006155


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 72/73 (99%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIQQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAI+QRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

12) YPTS_0338 in NC_010634


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 72/73 (99%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIQQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60
           MQHITVLEEDIKHDPTAI+QRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

13) YpsIP31758_3828 in NC_009708


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 71/73 (98%), Positives = 73/73 (100%), Gaps = 0/73 (0%)

Query  1   MQHITVLEEDIKHDPTAIQQRKEILARGRRLITCQLSLLQTPENYQSLNDMMLALQRAEE  60
           MQHITVLEEDIKHDPTAI+QRKEILARGRRLITCQLSLLQTPENYQSLN+MMLALQRAEE
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIEILTLRYGNKE  73
           IIEILTLRYGNKE
Sbjct  61  IIEILTLRYGNKE  73

14) YE105_C0314 in NC_015224


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score = 54.7 bits (188),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 39/71 (55%), Positives = 54/71 (77%), Gaps = 0/71 (0%)

Query  1   MPHITELEDRIKNDTLSIQHkkfllikekillTHQLSLQQTPENYKVLRDLMLALNSAEK  60
           M HIT LE+ IK+D  +I+++K +L + + L+T QLSL QTPENY+ L ++MLAL+ AE 
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIETLCLRYGH  71
           IIE L LRYG+
Sbjct  61  IIEILTLRYGN  71

15) Y11_35221 in NC_017564


> NC_003143_P1|5|G5|218927464|YP_002345339.1|Yersinia_pestis_CO92|+|6443..6664|-|YPO0259|type 
III secretion apparatus
Length=73

 Score = 54.0 bits (185),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 39/71 (55%), Positives = 54/71 (77%), Gaps = 0/71 (0%)

Query  1   MPHITELEDCIKNDTLSIQHkkfllikekillTHQLSLQQTPENYKVLRDLMLALNSAEK  60
           M HIT LE+ IK+D  +I+++K +L + + L+T QLSL QTPENY+ L ++MLAL+ AE 
Sbjct  1   MQHITVLEEDIKHDPTAIKQRKEILARGRRLITCQLSLLQTPENYQSLNNMMLALQRAEE  60

Query  61  IIETLCLRYGH  71
           IIE L LRYG+
Sbjct  61  IIEILTLRYGN  71