Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
hypothetical protein |
NC_002745 (Staphylococcus aureus N315) |
2e-121 |
100 |
|
Truncated replication protein for pUB110 plasmid |
NC_017340 (Staphylococcus aureus 04-02981) |
2e-120 |
99 |
|
truncated replication protein for pUB110 plasmid |
NC_009782 (Staphylococcus aureus Mu3) |
2e-120 |
99 |
|
hypothetical protein |
NC_002758 (Staphylococcus aureus Mu50) |
2e-120 |
99 |
|
plasmid replication protein RepU |
NC_017961 (Enterococcus faecium DO) |
6e-120 |
99 |
|
plasmid replication protein |
NC_013798 (Streptococcus gallolyticus UCN34) |
4e-117 |
99 |
|
Replication protein |
NC_022226 (Staphylococcus aureus CN1) |
6e-117 |
99 |
|
hypothetical protein |
NC_003383 (Listeria innocua Clip11262) |
4e-80 |
59 |
|
plasmid replication initiation protein |
NC_011997 (Macrococcus caseolyticus JCSC5402) |
4e-78 |
58 |
|
replication protein |
NC_007169 (Staphylococcus haemolyticus JCSC1435) |
3e-72 |
54 |
|
replication protein Rep |
NC_017336 (Staphylococcus aureus ST398) |
2e-71 |
54 |
|
replication protein |
NC_017332 (Staphylococcus aureus TW20) |
3e-68 |
54 |
|
Replication protein |
NC_022227 (Staphylococcus aureus CN1) |
5e-68 |
55 |
|
replication protein |
NC_007790 (Staphylococcus aureus FPR3757) |
5e-68 |
55 |
|
replication initiation protein |
NC_012417 (Staphylococcus aureus TCH1516) |
5e-68 |
55 |
|
putative replication initiation protein Rep domain protein |
NC_017346 (Staphylococcus aureus ECT-R 2) |
1e-66 |
54 |
|
replication protein |
NC_017348 (Staphylococcus aureus LGA251) |
3e-66 |
57 |
|
plasmid replication protein |
NC_016606 (Pediococcus claussenii ATCC BAA-344) |
2e-65 |
51 |
|
replication protein |
NC_006375 (Lactobacillus plantarum WCFS1) |
5e-62 |
46 |
|
RepA |
NC_016035 (Lactobacillus buchneri CD034) |
2e-61 |
46 |
|
Replication protein |
NC_020539 (Staphylococcus aureus ST228) |
1e-53 |
58 |
|
Replication protein |
NC_020567 (Staphylococcus aureus ST228) |
1e-53 |
58 |
|
Replication protein |
NC_020530 (Staphylococcus aureus ST228 (isolate=10388)) |
1e-53 |
58 |
|
Replication protein |
NC_020531 (Staphylococcus aureus ST228 (isolate=10497)) |
1e-53 |
58 |
|
Replication protein |
NC_020565 (Staphylococcus aureus ST228 (isolate=15532)) |
1e-53 |
58 |
|
Replication protein |
NC_020534 (Staphylococcus aureus ST228 (isolate=16035)) |
1e-53 |
58 |
|
Replication protein |
NC_020538 (Staphylococcus aureus ST228 (isolate=18412)) |
1e-53 |
58 |
|
plasmid rolling circle replication initiator protein |
NC_008501 (Streptococcus thermophilus LMD-9) |
8e-50 |
41 |
|
Replication protein |
NC_021721 (Lactobacillus casei LOCK919) |
9e-50 |
44 |
|
replication protein |
NC_014334 (Lactobacillus casei Zhang) |
9e-50 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002745_R1' AND ph.id_pai_orf='5' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc