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Homologs of unnamed gene of EF611304

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) RSPO_c02811
( YP_006030639.1 )

hypothetical protein

NC_017574
(Ralstonia solanacearum Po82)

3e-76

2) YPTB0245
( YP_068791.1 )

hypothetical protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

3e-69

3) YPTS_0261
( YP_001870713.1 )

hypothetical protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-69

4) YPK_3955
( YP_001722671.1 )

hypothetical protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

3e-69

• Sequence Alignments

1) RSPO_c02811 in NC_017574


> EF611304|5|G5|148807463|ABR13534.1|Pseudomonas_aeruginosa_PSE9|+|5169..6371|-|-|phage-related 
DNA-binding protein
Length=400

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 177/401 (45%), Positives = 273/401 (69%), Gaps = 3/401 (0%)

Query  1    MRIGVAGFQPERLIQARLCRGLTQTALAAKVGKSSGTVSKWEKGDQVPESEALQRLSDHL  60
            MR G+ GFQ+ERL Q R   GLTQ +LA  +G S+G +SKWE G   P + +++++ + +
Sbjct  1    MRTGILGFQSERLKQLRSASGLTQEGLAELIGCSAGNISKWETGSSYPTAPSFHKICEFF  60

Query  61   GMPTSWFLTALPSYG-DKVCFYRSTAAVTKEAQTIADIRLKWLNEISLVLQDWVDWPTVN  119
            G++ SW+L      G  +  F+RS  +  K +  +AD RL WL+EIS  LQ+ ++ P +N
Sbjct  61   GVSESWLLEKPIKSGFLRPSFFRSQVTTPKISWDVADARLDWLEEISYKLQESLEFPPIN  120

Query  120  IPRLGANDHLKITDADIEQAAQACRRQWNLGLGPISDMVLVLENAGVICVREELGYTRMD  179
            IP   +N+   I+D DIE  A+ CR+ W LG GPI +++ VLEN G +  R  LG+ +MD
Sbjct  121  IPAYNGNNVREISDEDIESLADECRKTWRLGDGPIQNVIQVLENFGAVTARCTLGFLKMD  180

Query  180  GASQWFDTDGRPYVFLAADKANGVRSRFDAAHELGHLVLHRDIDDVEFMKRYPEIERQah  239
            G S+W + D RPYV++A+DKA+ +R+RFDAAHELGHLVLHR+++  +    Y  +E QAH
Sbjct  181  GVSRWSEVDNRPYVLIAGDKASPIRNRFDAAHELGHLVLHRGVGFDQARVDYHLLENQAH  240

Query  240  lfaaafllpaetfaaEMIRPSLDTFLALKLRWKVSVAAMIMRCRQLGIIDDAYATRLWKN  299
             FA+AFL+P+E+F+ E+ +P+LD FLALK RWKVS+AAMI RC++L ++DD    RLWK 
Sbjct  241  RFASAFLMPSESFPLEVKWPTLDGFLALKKRWKVSIAAMIKRCHDLNVVDDEAVVRLWKG  300

Query  300  YSARGWRKGEPLDDRLGFESVRLLPRTINLLLSEGGLTKEGLLASVGFSATDCEKLCGLP  359
             SARGW K EPLD+ ++FE  +L++R++++++ ++ LTK+ L   +G ++   E LC+L 
Sbjct  301  RSARGWVKKEPLDEEFSFEQPKLISRSVKMIIENDILTKNQLKEILGVPSEKLEELCALE  360

Query  360  EGFFSQQSSVSSLDAVRLKKQSL-DGSPSSSAGTILQFPRK  399
             G+F  +     +D +R++ +S  +  + S++G +L FP+K
Sbjct  361  KGYFQSNDEQKIID-IRIRANSPRETHARSTSGVVLGFPKK  400

2) YPTB0245 in NC_006155


> EF611304|5|G5|148807463|ABR13534.1|Pseudomonas_aeruginosa_PSE9|+|5169..6371|-|-|phage-related 
DNA-binding protein
Length=400

 Score =  255 bits (951),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 152/372 (41%), Positives = 250/372 (68%), Gaps = 9/372 (2%)

Query  1    MRVGISGFQPERLTQMREARGLSKINLGRLVERSPSTITKWENGSHSPDAEGLASLGKVL  60
            MR GI GFQ+ERL Q+R A GL++  L+ L+  S++ I+KWE GS  P A ++  +   +
Sbjct  1    MRTGILGFQSERLKQLRSASGLTQEGLAELIGCSAGNISKWETGSSYPTAPSFHKICEFF  60

Query  61   NCPVSWF----TKVAYERENNPVFFRTLSATAKDLCKSSEVYMGWLQEISASLQEYLDYP  116
              + SW+     K ++ R   P FFR+  +T+K     ++  ++WL+EIS  LQE L++P
Sbjct  61   GVSESWLLEKPIKSGFLR---PSFFRSQVTTPKISWDVADARLDWLEEISYKLQESLEFP  117

Query  117  NVNIPYLDVDDYRSIDDEAIERVASDCRKRWGLGIAPIQDLLLVMENAGVVCSRFEQGSV  176
             +NIP  + ++ R I DE IE +A +CRK W LG +PIQ+++ V+EN G V +R   G +
Sbjct  118  PINIPAYNGNNVREISDEDIESLADECRKTWRLGDGPIQNVIQVLENFGAVTARCTLGFL  177

Query  177  MMDGYSQWNEKENRPYVVLASDKNNYFRSRFDAAHELGHLVLHRYVK-RLDSINFKPIEE  235
             MDG S+W+E +NRPYV++A+DK + +R+RFDAAHELGHLVLHR V      +++  +E+
Sbjct  178  KMDGVSRWSEVDNRPYVLIAGDKASPIRNRFDAAHELGHLVLHRGVGFDQARVDYHLLEN  237

Query  236  QAHKFAACFMLPEEAFSAELPSFPSLENFVSLKSRWGMSAQSMILRARDLELISSIEYQR  295
            QAH+FA+ F++P E+F+ E+   P+L+ F++LK RW +S  +MI R +DL+++      R
Sbjct  238  QAHRFASAFLMPSESFPLEV-KWPTLDGFLALKKRWKVSIAAMIKRCHDLNVVDDEAVVR  296

Query  296  LYKSLSSRGWRKGEPLDDQRKPESVRLLPRCINLLLESTIFSKHGFLEFVNLARGDVEDL  355
            L K+ S+RGW K EPLD++   E  +L++R +++++E+ I++K+ + E++ ++   +E+L
Sbjct  297  LWKGRSARGWVKKEPLDEEFSFEQPKLISRSVKMIIENDILTKNQLKEILGVPSEKLEEL  356

Query  356  CSLPKGFLAESA  367
            C+L KG++  + 
Sbjct  357  CALEKGYFQSND  368

3) YPTS_0261 in NC_010634


> EF611304|5|G5|148807463|ABR13534.1|Pseudomonas_aeruginosa_PSE9|+|5169..6371|-|-|phage-related 
DNA-binding protein
Length=400

 Score =  255 bits (951),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 152/372 (41%), Positives = 250/372 (68%), Gaps = 9/372 (2%)

Query  1    MRVGISGFQPERLTQMREARGLSKINLGRLVERSPSTITKWENGSHSPDAEGLASLGKVL  60
            MR GI GFQ+ERL Q+R A GL++  L+ L+  S++ I+KWE GS  P A ++  +   +
Sbjct  1    MRTGILGFQSERLKQLRSASGLTQEGLAELIGCSAGNISKWETGSSYPTAPSFHKICEFF  60

Query  61   NCPVSWF----TKVAYERENNPVFFRTLSATAKDLCKSSEVYMGWLQEISASLQEYLDYP  116
              + SW+     K ++ R   P FFR+  +T+K     ++  ++WL+EIS  LQE L++P
Sbjct  61   GVSESWLLEKPIKSGFLR---PSFFRSQVTTPKISWDVADARLDWLEEISYKLQESLEFP  117

Query  117  NVNIPYLDVDDYRSIDDEAIERVASDCRKRWGLGIAPIQDLLLVMENAGVVCSRFEQGSV  176
             +NIP  + ++ R I DE IE +A +CRK W LG +PIQ+++ V+EN G V +R   G +
Sbjct  118  PINIPAYNGNNVREISDEDIESLADECRKTWRLGDGPIQNVIQVLENFGAVTARCTLGFL  177

Query  177  MMDGYSQWNEKENRPYVVLASDKNNYFRSRFDAAHELGHLVLHRYVK-RLDSINFKPIEE  235
             MDG S+W+E +NRPYV++A+DK + +R+RFDAAHELGHLVLHR V      +++  +E+
Sbjct  178  KMDGVSRWSEVDNRPYVLIAGDKASPIRNRFDAAHELGHLVLHRGVGFDQARVDYHLLEN  237

Query  236  QAHKFAACFMLPEEAFSAELPSFPSLENFVSLKSRWGMSAQSMILRARDLELISSIEYQR  295
            QAH+FA+ F++P E+F+ E+   P+L+ F++LK RW +S  +MI R +DL+++      R
Sbjct  238  QAHRFASAFLMPSESFPLEV-KWPTLDGFLALKKRWKVSIAAMIKRCHDLNVVDDEAVVR  296

Query  296  LYKSLSSRGWRKGEPLDDQRKPESVRLLPRCINLLLESTIFSKHGFLEFVNLARGDVEDL  355
            L K+ S+RGW K EPLD++   E  +L++R +++++E+ I++K+ + E++ ++   +E+L
Sbjct  297  LWKGRSARGWVKKEPLDEEFSFEQPKLISRSVKMIIENDILTKNQLKEILGVPSEKLEEL  356

Query  356  CSLPKGFLAESA  367
            C+L KG++  + 
Sbjct  357  CALEKGYFQSND  368

4) YPK_3955 in NC_010465


> EF611304|5|G5|148807463|ABR13534.1|Pseudomonas_aeruginosa_PSE9|+|5169..6371|-|-|phage-related 
DNA-binding protein
Length=400

 Score =  255 bits (951),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 152/372 (41%), Positives = 250/372 (68%), Gaps = 9/372 (2%)

Query  1    MRVGISGFQPERLTQMREARGLSKINLGRLVERSPSTITKWENGSHSPDAEGLASLGKVL  60
            MR GI GFQ+ERL Q+R A GL++  L+ L+  S++ I+KWE GS  P A ++  +   +
Sbjct  1    MRTGILGFQSERLKQLRSASGLTQEGLAELIGCSAGNISKWETGSSYPTAPSFHKICEFF  60

Query  61   NCPVSWF----TKVAYERENNPVFFRTLSATAKDLCKSSEVYMGWLQEISASLQEYLDYP  116
              + SW+     K ++ R   P FFR+  +T+K     ++  ++WL+EIS  LQE L++P
Sbjct  61   GVSESWLLEKPIKSGFLR---PSFFRSQVTTPKISWDVADARLDWLEEISYKLQESLEFP  117

Query  117  NVNIPYLDVDDYRSIDDEAIERVASDCRKRWGLGIAPIQDLLLVMENAGVVCSRFEQGSV  176
             +NIP  + ++ R I DE IE +A +CRK W LG +PIQ+++ V+EN G V +R   G +
Sbjct  118  PINIPAYNGNNVREISDEDIESLADECRKTWRLGDGPIQNVIQVLENFGAVTARCTLGFL  177

Query  177  MMDGYSQWNEKENRPYVVLASDKNNYFRSRFDAAHELGHLVLHRYVK-RLDSINFKPIEE  235
             MDG S+W+E +NRPYV++A+DK + +R+RFDAAHELGHLVLHR V      +++  +E+
Sbjct  178  KMDGVSRWSEVDNRPYVLIAGDKASPIRNRFDAAHELGHLVLHRGVGFDQARVDYHLLEN  237

Query  236  QAHKFAACFMLPEEAFSAELPSFPSLENFVSLKSRWGMSAQSMILRARDLELISSIEYQR  295
            QAH+FA+ F++P E+F+ E+   P+L+ F++LK RW +S  +MI R +DL+++      R
Sbjct  238  QAHRFASAFLMPSESFPLEV-KWPTLDGFLALKKRWKVSIAAMIKRCHDLNVVDDEAVVR  296

Query  296  LYKSLSSRGWRKGEPLDDQRKPESVRLLPRCINLLLESTIFSKHGFLEFVNLARGDVEDL  355
            L K+ S+RGW K EPLD++   E  +L++R +++++E+ I++K+ + E++ ++   +E+L
Sbjct  297  LWKGRSARGWVKKEPLDEEFSFEQPKLISRSVKMIIENDILTKNQLKEILGVPSEKLEEL  356

Query  356  CSLPKGFLAESA  367
            C+L KG++  + 
Sbjct  357  CALEKGYFQSND  368