Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
hypothetical protein |
NC_009792 (Citrobacter koseri ATCC BAA-895) |
0.0 |
100 |
|
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) |
NC_020181 (Enterobacter aerogenes EA1509E) |
0.0 |
100 |
|
ATPase |
NC_018522 (Klebsiella pneumoniae 1084) |
0.0 |
100 |
|
putative type IV secretory pathway VirB4 component |
NC_011745 (Escherichia coli ED1a) |
0.0 |
99 |
|
putative type IV secretory pathway VirB4 component |
NC_011751 (Escherichia coli UMN026) |
0.0 |
99 |
|
putative type IV secretory pathway VirB4 component |
NC_016845 (Klebsiella pneumoniae HS11286) |
0.0 |
99 |
|
type IV secretory pathway VirB3-4 component |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
0.0 |
99 |
|
type IV secretory pathway VirB4 component |
NC_005814 (Yersinia pestis 91001) |
0.0 |
98 |
|
hypothetical protein |
NC_009779 (Cronobacter sakazakii ATCC BAA-894) |
0.0 |
92 |
|
hypothetical protein |
NC_013284 (Cronobacter turicensis z3032) |
0.0 |
91 |
|
CagE, TrbE, VirB component of type IV transporter system |
NC_013592 (Dickeya dadantii Ech586) |
0.0 |
88 |
|
TriC protein |
NC_006154 (Yersinia pseudotuberculosis IP 32953) |
0.0 |
57 |
|
type IV secretory pathway, VirB4 component |
NC_016818 (Rahnella aquatilis CIP 78.65) |
0.0 |
52 |
|
type IV secretion/conjugal transfer ATPase |
NC_011283 (Klebsiella pneumoniae 342) |
0.0 |
52 |
|
putative conjugal transfer protein |
NC_017047 (Rahnella aquatilis HX2) |
0.0 |
52 |
|
conjugal transfer protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
0.0 |
52 |
|
putative conjugal transfer protein |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
0.0 |
52 |
|
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) |
NC_014500 (Dickeya dadantii 3937) |
0.0 |
51 |
|
CagE TrbE VirB component of type IV transporter system |
NC_012912 (Dickeya zeae Ech1591) |
0.0 |
51 |
|
CagE, TrbE, VirB component of type IV transporter system |
NC_013592 (Dickeya dadantii Ech586) |
0.0 |
51 |
|
Type IV secretion system protein virB4 |
NC_017845 (Pectobacterium sp. SCC3193) |
0.0 |
52 |
|
TriC protein |
NC_011092 (Salmonella enterica CVM19633) |
0.0 |
52 |
|
putative conjugal transfer protein TriC |
NC_013718 (Citrobacter rodentium ICC168) |
0.0 |
50 |
|
putative conjugal transfer protein TriC |
NC_021841 (Salmonella enterica 41578) |
0.0 |
50 |
|
triC protein |
NC_010657 (Shigella boydii CDC 3083-94) |
0.0 |
50 |
|
putative conjugal transfer protein |
NC_022078 (Klebsiella pneumoniae JM45) |
0.0 |
45 |
|
type IV secretion/conjugal transfer ATPase |
NC_017624 (Salmonella enterica B182) |
0.0 |
43 |
|
putative Pilx3-4/VirB3-4 protein, putative conjugal transfer protein |
NC_011739 (Escherichia coli UMN026) |
0.0 |
43 |
|
conjugal transfer protein |
NC_021842 (Salmonella enterica CFSAN002069) |
0.0 |
44 |
|
putative conjugal transfer protein |
NC_010555 (Proteus mirabilis HI4320) |
1e-180 |
42 |
|
pilx4 protein |
NC_011204 (Salmonella enterica CT_02021853) |
9e-178 |
44 |
|
ATPase |
NC_016513 (Aggregatibacter actinomycetemcomitans ANH9381) |
9e-168 |
44 |
|
hypothetical protein |
NC_014629 (Aggregatibacter actinomycetemcomitans D11S-1) |
1e-155 |
46 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY233333' AND ph.id_pai_orf='5' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc