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Homologs of int gene of AF440524

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Pecwa_1597
( YP_003258994.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

8e-164

2) Neut_0006
( YP_746264.1 )

phage integrase family protein

NC_008344
(Nitrosomonas eutropha C91)

1e-163

3) W5S_1461
( YP_006282427.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

2e-162

4) XCV2261
( YP_363992.1 )

phage-related integrase

NC_007508
(Xanthomonas campestris 85-10)

6e-160

5) Ajs_1340
( YP_985634.1 )

phage integrase family protein

NC_008782
(Acidovorax sp. JS42)

4e-156

6) intB
( YP_004714881.1 )

Putative integrase

NC_015740
(Pseudomonas stutzeri ATCC 17588)

3e-150

7) Ajs_1213
( YP_985520.1 )

phage integrase family protein

NC_008782
(Acidovorax sp. JS42)

2e-138

8) PputW619_3372
( YP_001750225.1 )

integrase family protein

NC_010501
(Pseudomonas putida W619)

7e-138

9) DSC_03650
( YP_004929424.1 )

integrase family protein

NC_016147
(Pseudoxanthomonas spadix BD-a59)

4e-128

10) xerC
( YP_007649721.1 )

Integrase

NC_020815
(Xanthomonas citri Aw12879)

2e-116

11) int
( YP_158425.1 )

phage-related integrase

NC_006513
(Aromatoleum aromaticum EbN1)

6e-103

12) XOC_2579
( YP_005628864.1 )

integrase

NC_017267
(Xanthomonas oryzae BLS256)

6e-94

13) PFLU1878
( YP_002871513.1 )

putative integrase

NC_012660
(Pseudomonas fluorescens SBW25)

2e-89

14) ECENHK_04640
( YP_006577439.1 )

integrase

NC_018405
(Enterobacter cloacae ENHKU01)

1e-65

15) PAU_02730
( YP_003041563.1 )

putative prophage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

9e-66

16) SerAS9_4095
( YP_004507455.1 )

integrase

NC_015567
(Serratia plymuthica AS9)

3e-65

17) SerAS12_4096
( YP_004502503.1 )

integrase family protein

NC_015566
(Serratia sp. AS12)

3e-65

18) SerAS13_4096
( YP_006026917.1 )

integrase family protein

NC_017573
(Serratia sp. AS13)

3e-65

19) intS
( YP_003466695.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

4e-65

20) Spro_3887
( YP_001480111.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

2e-64

21) A79E_0092
( YP_006633935.1 )

phage integrase, Phage P4-associated

NC_018522
(Klebsiella pneumoniae 1084)

4e-64

22) KP1_5380
( YP_002921868.1 )

phage integrase family protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

4e-64

23) SEEH1578_21245
( YP_008248300.1 )

integrase

NC_021810
(Salmonella enterica 41578)

4e-64

24) EcHS_A0329
( YP_001457101.1 )

site-specific recombinase, phage integrase

NC_009800
(Escherichia coli HS)

5e-64

25) EcSMS35_0299
( YP_001742404.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

5e-64

26) CFSAN002069_19870
( YP_008252715.1 )

integrase

NC_021812
(Salmonella enterica CFSAN002069)

5e-64

27) SeHA_C2638
( YP_002046450.1 )

integrase

NC_011083
(Salmonella enterica SL476)

5e-64

28) EC042_3992
( YP_006098276.1 )

integrase

NC_017626
(Escherichia coli 042)

1e-63

29) PC1_3281
( YP_003018833.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

1e-63

30) AvCA_40500
( YP_007894968.1 )

Phage integrase

NC_021149
(Azotobacter vinelandii CA)

2e-63

31) AvCA6_40500
( YP_007900017.1 )

Phage integrase

NC_021150
(Azotobacter vinelandii CA6)

2e-63

32) Avin_40500
( YP_002801161.1 )

phage integrase

NC_012560
(Azotobacter vinelandii DJ)

2e-63

33) EcSMS35_4002
( YP_001745965.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

2e-63

34) PC1_2828
( YP_003018394.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-63

35) SMWW4_v1c00920
( YP_007403919.1 )

phage integrase

NC_020211
(Serratia marcescens WW4)

6e-63

36) ETAF_0751
( YP_005698365.1 )

Integrase

NC_017309
(Edwardsiella tarda FL6-60)

7e-63

37) ECO26_4941
( YP_003231837.1 )

integrase

NC_013361
(Escherichia coli 11368)

7e-63

38) SEEH1578_04845
( YP_008245042.1 )

integrase

NC_021810
(Salmonella enterica 41578)

7e-63

39) int
( YP_002399202.1 )

Integrase from prophage

NC_011745
(Escherichia coli ED1a)

2e-62

40) ECSE_0264
( YP_002291539.1 )

putative phage integrase

NC_011415
(Escherichia coli SE11)

1e-61

41) ENC_02820
( YP_007844422.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

2e-61

42) EcolC_0053
( YP_001723066.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

3e-61

43) ETAC_11945
( YP_007629870.1 )

putative phage integrase

NC_020796
(Edwardsiella tarda C07-087)

4e-61

44) YE105_C3845
( YP_004300042.1 )

putative phage integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

5e-61

45) YPC_4545
( YP_005626217.1 )

putative phage integrase

NC_017265
(Yersinia pestis Harbin 35)

5e-59

46) YpAngola_A4153
( YP_001608430.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

1e-58

47) SARI_03887
( YP_001572823.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-58

48) xerC4
( NP_994679.1 )

phage integrase

NC_005810
(Yersinia pestis 91001)

7e-59

49) A1122_05665
( YP_005520819.1 )

putative phage integrase

NC_017168
(Yersinia pestis A1122)

7e-59

50) YPA_4123
( YP_654029.1 )

putative phage integrase

NC_008150
(Yersinia pestis Antiqua)

7e-59

51) YPO4033
( YP_002348896.1 )

phage integrase

NC_003143
(Yersinia pestis CO92)

7e-59

52) YPD4_3547
( YP_005506754.1 )

putative phage integrase

NC_017154
(Yersinia pestis D106004)

7e-59

53) YPD8_3553
( YP_005510614.1 )

putative phage integrase

NC_017160
(Yersinia pestis D182038)

7e-59

54) y4052
( NP_671345.1 )

integrase

NC_004088
(Yersinia pestis KIM)

7e-59

55) YPN_3680
( YP_649607.1 )

phage integrase

NC_008149
(Yersinia pestis Nepal516)

7e-59

56) YPDSF_3775
( YP_001165093.1 )

phage integrase

NC_009381
(Yersinia pestis Pestoides F)

7e-59

57) SU5_02989
( YP_006088602.1 )

Phage integrase, Phage P4-associated

NC_017623
(Salmonella enterica B182)

7e-59

58) PputW619_4347
( YP_001751196.1 )

integrase family protein

NC_010501
(Pseudomonas putida W619)

2e-58

59) Y11_30661
( YP_006006565.1 )

phage integrase

NC_017564
(Yersinia enterocolitica Y11)

1e-54

60) EcE24377A_3377
( YP_001464377.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

1e-51

61) EcSMS35_3112
( YP_001745129.1 )

site-specific recombinase, phage integrase family protein

NC_010498
(Escherichia coli SMS-3-5)

8e-52

62) SeHA_C4738
( YP_002048369.1 )

integrase

NC_011083
(Salmonella enterica SL476)

6e-51

• Sequence Alignments

1) Pecwa_1597 in NC_013421


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  570 bits (2152),  Expect = 8e-164, Method: Compositional matrix adjust.
 Identities = 342/457 (75%), Positives = 411/457 (90%), Gaps = 0/457 (0%)

Query  1    MALSDMAVRQAKATGKAYTLGDIDGLSLAVTDMGGRSWHFRYSWAGKQKRMSLGTYPEVG  60
            MAL+D+AVRQA++TGK YTL D+DGLSLAV+  GG+SWHFRY WA+KQKRMSLGTYP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LREARTLRDQARALLAKGINPKLDRKHKRQFVRLADEHTFKAVFLQWVEHRRLELKEGRN  120
            LREAR+LRD+ARAL AKGINPK+DRKHK + VRLA E++FKAV+LQW+ HRRLELKEGR+
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  STLSQILRIFERDVLPSLSKLSIYDVRRADLLNVLSKIEQREAFTTAEKVRSWLNQLFRF  180
            STLSQI RIF++DVLP+L+ ++I+D+RR++LL+VL+ IEQR AFTTAEKVR+W+ QLFRF
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  AQVKVERLESNPASDLDvvavpappvvHNPFlrlpelpellQKVRGYRGAITTQLGIRLL  240
            A VK E L +NPASDLDVVA P PPV HNPFLRL ELPELL+K+R YRG ITTQLGIRLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  241  LLTGVRTGELRLAAPEQFDLEQGLWIIPPEVVKQLQTDMRKKGKRPQDIPSYIVPLSIQA  300
            LLTGVRTGELRLA+P+QFDLE+GLWIIPPEVVKQLQ +MRK+GKRPQDIP+YIVPLS+QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  301  IEIVRYLLEEVRPAQRYLFSHRSDLKKRISENTLNGALKRMGYQDLLTGHGIRGTISTAL  360
            IEIVRYLLE+V+PAQR L++HR+DLKKRISENTLN+AL+RMGY++LLTGHGIRGT+ST+L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  361  NEVGYPKVWVDAQLSHCDPNQVSAAYNHALYVEPRRKMMQDWADRLDLLEQGEVEAASQH  420
            NE+GYPK+WVDAQLSH DPN+VSA+YNHALYVEPRRKMMQDWADRLDLLEQG+V AAS H
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASLH  420

Query  421  LTIRIDGVPVLDESNGADAMSKDVSPIIGGITSHRLS  457
            L+I+I+G  V +ES+G  A+    +  +G  + + L+
Sbjct  421  LAIHINGTQVQNESEGFLAIEGSAGTSVGNSAQRNLG  457

2) Neut_0006 in NC_008344


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  569 bits (2149),  Expect = 1e-163, Method: Compositional matrix adjust.
 Identities = 348/458 (76%), Positives = 406/458 (89%), Gaps = 3/458 (0%)

Query  1    MALSDMAVRQARATGKNYTLGDIDGLSLAVTAQGGRSWHFRYCWADKQKRMSLGTYPEIG  60
            MAL+D+AVRQAR+TGK+YTL D+DGLSLAV+A+GG+SWHFRY WA KQKRMSLGTYP ++
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   lrearalrdqarallaKGINPKVDRKHKRQAVRLADEHNFKAVYLQWIEHRKLELKEGRQ  120
            LREARALRD+ARAL AKGINPKVDRKHK +AVRLA E++FKAVYLQW+ HR+LELKEGRQ
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  STLSQIQRIFKNDVLPSLGRTSIYDIRRSYLLEVLAKIEQRGALTTAEKVRTWFNQLFRF  180
            STLSQIQRIF +DVLP+LG  +I+DIRRS LL+VLA IEQRGA+TTAEKVRTWF QLFRF
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  ALVKIERLETNPASDLDVVAIPKPPAAHNPFLRLPEIPELLQKLRSYRGAVTTKLGIRLL  240
            A+VK E L  NPASDLDVVA PKPP AHNPFLRL E+PELL+KLR YRG +TT+LGIRLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  241  MLTGVRTGELRLAAPDQFDLERGLWIIPPEVVKQLQLDMRKKGKRTQDIPPYIVPLSLQA  300
            +LTGVRTGELRLA+PDQFDLERGLWIIPPEVVKQLQ +MRK+GKR QDIPPYIVPLS+QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  301  IEIVQSLLERIKPAQRYLLAHRSDLTKRISENTLNGALKRMGYQDLLTGHGIRGTISTAL  360
            IEIV+ LLE++KPAQR LLAHR+DL KRISENTLN+AL+RMGY++LLTGHGIRGT+ST+L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  361  NEFGYLKKWVDAQLSHSDPDKVSTAYNHAEYVEPRRRMMQDWADRLDLLEQGHVAAASTH  420
            NE+GY K WVDAQLSH+DP+KVS++YNHA YVEPRR+MMQDWADRLDLLEQG+V AAS H
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASLH  420

Query  421  LTIRIEGVPAMVNNK---HASGPAVASATDSAQTTIET  455
            L+I+I+G     ++       G+A +S  +SAQ  +  
Sbjct  421  LAIHINGTQVQNESEGFLAIEGSAGTSVGNSAQRNLGG  458

3) W5S_1461 in NC_017845


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  565 bits (2135),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 341/457 (75%), Positives = 410/457 (90%), Gaps = 0/457 (0%)

Query  1    MALSDMAVRQARATGKAYTLGDIDGLSLAVTDMGGRSWHFRYSWAGKQKRMSLGTYPEVG  60
            MAL+D+AVRQAR+TGK YTL D+DGLSLAV+  GG+SWHFRY WA+KQKRMSLGTYP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LREARTLRDQARALLAKGINPKLDRKHKRQFVRLADEHTFKAVFLQWVEHRKLELKEGRN  120
            LREAR+LRD+ARAL AKGINPK+DRKHK + VRLA E++FKAV+LQW+ HR+LELKEGR+
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  STLSQILRIFERDVLPSLSKLSIYDVRRADLLNVLSKIEQREAFTTAEKVRSWLNQLFRF  180
            STLSQI RIF++DVLP+L+ ++I+D+RR++LL+VL+ IEQR AFTTAEKVR+W+ QLFRF
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  AQVKVERLESNPASDLDvvavpappvaHNPFlrlpelpellQKVRGYRGAITTQLGIRLL  240
            A VK E L +NPASDLDVVA P PPVAHNPFLRL ELPELL+K+R YRG ITTQLGIRLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  241  LLTGVRTGELRLATPEQFDLEQGLWIIPPEVVKQLQTDMRKKGKRPQDIPSYIVPLSIQA  300
            LLTGVRTGELRLATP+QFDLE+GLWIIPPEVVKQLQ +MRK+GKRPQDIP+YIVPLS+QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  301  IEIVRYLFEEVRPAQRYLFSHRSDLKKRISENTLNGALKRMGYQDLLTGHGIRGTISTAL  360
            IEIVRYL+E+V+PAQR L++HR+DLKKRISENTLN+AL+RMGY++LLTGHGIRGT+ST+L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  361  NEVGYPKVWVDAQLSHCDPNQVSAAYNHALYVEPRRKMMQDWADRLDLLEQGEVEAASQH  420
            NE+GYPK+WVDAQLSH DPN+VSA+YNHALYVEPRRKMMQDWADRLDLLEQG+V AAS H
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASLH  420

Query  421  LTIRIDGVPVLDESNVADVMPKDVSPVIGGITPHRLS  457
            L+I+I+G  V +ES+    +    +  +G  + + L+
Sbjct  421  LAIHINGTQVQNESEGFLAIEGSAGTSVGNSAQRNLG  457

4) XCV2261 in NC_007508


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  556 bits (2100),  Expect = 6e-160, Method: Compositional matrix adjust.
 Identities = 316/429 (74%), Positives = 385/429 (90%), Gaps = 1/429 (0%)

Query  2    MALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEVG  61
            MAL+D++VRQA+++ K Y++PD DGL+L V++ GGKSWH+RYYW +KQKR+SLG YP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  62   LREARTLRDEARALMAKGINPHTDRKQKRRAIKLASDYTFKAVFDAWVEHRAKELKEGRN  121
            LREAR+LRDEARAL AKGINP  DRK+K RA++LA++ +FKAV+  W+ HR  ELKEGR+
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  122  STLSQIQRIFGKDVLPSLERMSIYDIRRPQLLGVLARIERRKAFTTAEKVRTWLSQLFRY  181
            STLSQIQRIF+KDVLP+L  ++I+DIRR++LL+VLA IE+R AFTTAEKVRTW+ QLFR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  182  ALVIVEGMEANPATDLDVVAEPKPPVSHNPYLRLPELPDFLQKLRLYNPRGWQTQLGIRL  241
            A+V  EG+ +NPA+DLDVVA PKPPV+HNP+LRL ELP++L+KLR Y      TQLGIRL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNI-TTQLGIRL  239

Query  242  LFLTGVRTGELRLATPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSVQ  301
            L+LTGVRTGELRLATP+QFDL+RGLWIIPP++VKQLQD MRK GKRP+DIPPYIVPLSVQ
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  302  AIEIVRYLLGVMRPAQKHLLAHRSELKKRISENTLNAALKRVGYDAQLTGHGIRGTISTA  361
            AIEIVRYLL  ++PAQ+HLLAHR++LKKRISENTLNAAL+R+GY++ LTGHGIRGT+ST+
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  362  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGQVEAASA  421
            LNEIGYPKIWVDAQLSH+DPNKVS++YNHA YVEPRR+MMQDWADRLDLLEQG+V AAS 
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASL  419

Query  422  HLTIHIEGG  430
            HL+IHI+G 
Sbjct  420  HLAIHINGT  428

5) Ajs_1340 in NC_008782


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  544 bits (2053),  Expect = 4e-156, Method: Compositional matrix adjust.
 Identities = 316/453 (70%), Positives = 388/453 (86%), Gaps = 1/453 (0%)

Query  1    MALSDLIVRQAKTTGKRYTLHDNDCLSLMVSAAGGKSWIFRYSWLGTQKRMSLGSYPALS  60
            MAL+D+ VRQA+ TGK YTL D D LSL VSA GGKSW FRY W + QKRMSLG+YPA+S
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LREARAERDKAQALIARGIDPRIERDQRRHAARLAGEYTFKNVFDAWVEHRRKELKEGRQ  120
            LREARA RD A+AL A+GI+P+++R ++ +A RLA E +FK V+  W+ HRR ELKEGRQ
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  STLSQILRIFNKDVLPTLGKMSIYDIRRPQLVGVVAAIEKRKAFTTAEKVRTWFNQMFRY  180
            STLSQI RIF+KDVLP LG ++I+DIRR++L++V+A+IE+R AFTTAEKVRTWF Q+FR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  ALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL  240
            A+V AEGL  NPA+DLDVVA PKPPVAHNP+L+L ELPE+L+KLR Y      TQLG+RL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNI-TTQLGIRL  239

Query  241  LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ  300
            L+LTGVRTGELRLA P+QFDL+RGLWIIPP+VVKQLQD MRK GKRPQD+PPYIVPLS+Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  301  AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTA  360
            AIEIVRYLL  ++PAQ+ LL+HR++LKKRISENTLN A++ MGYEG LTGHGIRGT+ST+
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  361  LNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLDLLEQGEVEAASA  420
            LNEIGYPKIWVDAQLSH+DPNKVS++YNHA YVEPRR+MMQDWADRLDLLEQG+V AAS 
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASL  419

Query  421  HLTIRIDGVPVMAEAEDVVSAAPTVAEPVASGV  453
            HL+I+I+G  V  E+E+ ++   + + +V+++ 
Sbjct  420  HLAIHINGTQVQNESEGFLAIEGSAGTSVGNSA  452

6) intB in NC_015740


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  524 bits (1978),  Expect = 3e-150, Method: Compositional matrix adjust.
 Identities = 330/410 (81%), Positives = 372/410 (91%), Gaps = 6/410 (1%)

Query  1    MSLGTYPKVSlrearalrdearalVAKGINPKIDRKQKLRAVCFATENSFKVVYLQWLAH  60
            MSLGTYP VSLREARALRDEARAL AKGINPK+DRK+KLRAV +ATENSFK VYLQWLAH
Sbjct  51   MSLGTYPAVSLREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAH  110

Query  61   RKLELKEGRQSTLSQIQRIFDKDVLPALGSVSIFDICRPDLLDVLVSIEQRRAFTTAEKV  120
            R+LELKEGRQSTLSQIQRIFDKDVLP+LG+V+IFDI R++LLDVL +IEQR AFTTAEKV
Sbjct  111  RRLELKEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKV  170

Query  121  RTWLRQLFRFAMVKVAGLESNPASDLDVVAIPKPPVVNNPFLRLPELPNLLNKLRRYRGR  180
            RTW+RQLFRFAMVK  GL +NPASDLDVVA PKPPV +NPFLRL ELP+LL KLR YRG 
Sbjct  171  RTWFRQLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGN  230

Query  181  FTTQLGIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGQRPQDIP  240
            +TTQLGIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRG+RPQDIP
Sbjct  231  ITTQLGIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIP  290

Query  241  PYIVPLSVQAIEIVRYLLEQTKPAQRYLLAHRSELRMRISENTLNGAIKRMGYKDLLTGH  300
            PYIVPLSVQAIEIVRYLLEQ KPAQR LLAHR++L+ RISENTLN+A++RMGY +LLTGH
Sbjct  291  PYIVPLSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGH  350

Query  301  GIRGTLSTALNEFGYPKNWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLE  360
            GIRGTLST+LNE+GYPK WVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLE
Sbjct  351  GIRGTLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLE  410

Query  361  QNKVKAASTHLTIRFDGMPLLDQGAEMSFDPVDDGKSLILGSSVGGPIER  410
            Q  VKAAS HL+I+++G  + +++   +F +++++     G+SVG + +R
Sbjct  411  QGDVKAASLHLAIHINGTQVQNESE--GFLAIEGSA----GTSVGNSAQR  454

7) Ajs_1213 in NC_008782


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  484 bits (1826),  Expect = 2e-138, Method: Compositional matrix adjust.
 Identities = 279/383 (73%), Positives = 339/383 (89%), Gaps = 1/383 (0%)

Query  2    MTLSDLTVRQAKAAEKTYSIPDTDGLGLVVARTGGKSWHLRYYWLGKQKRISLGNYPEIG  61
            M+L+D++VRQA+++ K Y++PD DGL+L V+  GGKSWH+RYYW +KQKR+SLG YP ++
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  62   LREARTLRDEARALLAKGVNPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKEIKEGRN  121
            LREAR+LRDEARAL AKG+NP  DRK+K +AV+LA++ +FKAV+  W+ HRR E+KEGR+
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  122  STLSQILRIFNKDVLPSLKQMSIYDIRRPQLLGVLARIEERKAFTTAEKVRTWLGQLFRY  181
            STLSQI RIF+KDVLP+L  ++I+DIRR++LL+VLA IE+R AFTTAEKVRTW+ QLFR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  182  ALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPEFLHKLRLYNPRGWQTQLGIRL  241
            A+V  EGL +NPASDLDVVA PKPPV HNP+L+L ELPE+L+KLR Y      TQLGIRL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNI-TTQLGIRL  239

Query  242  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSVQ  301
            L+LTGVRTGELRLATPDQFDL+RGLWIIPP++VKQLQD MRK GKRPQD+PPYIVPLSVQ
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  302  AIEIVRYLLGVMRPAQVHLLTHRSELKKRISENTLNAALKRMGYKDQLTGHGIRGTISTA  361
            AIEIVRYLL  ++PAQ HLL+HR++LKKRISENTLNAAL+RMGY + LTGHGIRGT+ST+
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  362  LNEIGYPKIWVDAQLSHSDPNKV  384
            LNEIGYPKIWVDAQLSH+DPNKV
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKV  382

8) PputW619_3372 in NC_010501


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  484 bits (1823),  Expect = 7e-138, Method: Compositional matrix adjust.
 Identities = 289/428 (68%), Positives = 361/428 (85%), Gaps = 0/428 (0%)

Query  1    MALTEMAIRHARVTAKEYTLADSDGLFLNVTAQGSKIWHFRYYWEGRQKRMSFGSYPQVG  60
            MALT++A+R+AR T+K+YTL+D DGL L V+A+G+K WHFRYYW ++QKRMS+G+YP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LrdarerrdearaLIAQGFNPCEQRKQQRVALRLANDQTFDAVFEQWIAFRRLSLKEGRQ  120
            LR+AR  RDEARAL A+G+NP  +RK++  A+RLA +++F AV+ QW+A RRL LKEGRQ
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  STLSQILRIFAKDIQPYIGEQSIHEINRHVLMDLLSRIECRKAFTTAEKCRTWLNQLFRY  180
            STLSQI RIF KD+ P +G  +I +I R  L+D+L+ IE R AFTTAEK RTW+ QLFR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  ALVRIAGLEHNPAADLDVVAVPKPPVEHNPFLRMEELPHFLGKLRAFRGSQQTQLGIRLL  240
            A+V+  GL  NPA+DLDVVA PKPPV HNPFLR++ELP++L KLR +RG+  TQLGIRLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  241  LLTGVRTGELRLATPDQFDLERRLWIIPPEVVKQLQLKMRNTRRQTAKVPPYIVPLSIQA  300
            LLTGVRTGELRLATPDQFDLER LWIIPPEVVKQLQ  MR+  ++   +PPYIVPLS+QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  301  AEVVRLLLDQVVPAQRHLLTHRSDLSKRISENTLNSALRRMGFADRLTGHGVRATISTAL  360
             E+VR LL+QV PAQRHLL+HR+DL KRISENTLN+ALRRMG+ + LTGHG+R+T+ST+L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  361  NEIGYPKIWIDAQLSHADPDKVSSAYNHAEYVEQRRTMMQDWANRLDLWVQGHTKAAASP  420
            NEIGYPKIW+DAQLSHADP+KVS++YNHA YVE RR MMQDWA+RLDL  QG+ KAA+  
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASLH  420

Query  421  LTIRLEGV  428
            L+I+++G 
Sbjct  421  LAIHINGT  428

9) Rpic12D_0697 in NC_012856


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  479 bits (1804),  Expect = 3e-136, Method: Compositional matrix adjust.
 Identities = 311/435 (72%), Positives = 375/435 (87%), Gaps = 0/435 (0%)

Query  1    MALSDLVVRQAKATGKAYTLPDIDGLSLAVTTTGSKSWHFRYYWMKEPKRMSLGTYPEVS  60
            MAL+D+ VRQA++TGK YTLPD+DGLSLAV++ G+KSWHFRYYW    KRMSLGTYP VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   lrearalrdearalVAKDINPRLHRKQKRAAVKLAGENTFEAIYKKWLAHRELGLKKGRQ  120
            LREARALRDEARAL AK+INP+++RK+K  AV+LA EN+F A+Y +WLAHR L LK GRQ
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  TTLSILPRVFAKDVLPLLGKRSIYDIKRPDLLEVIARIERRKALSVAEKVRTWFNQMFRY  180
            +TLS + R+F KDVLP LG  +I+DI+R++LL+V+A IE+R A++ AEKVRTWF Q+FR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  ALVVVPGLEQNPASDLDVVALPLPPVNHNPFLRMAELPKLLQRLRKYrgrlqtqlglrll  240
            A+V   GL  NPASDLDVVA P PPV HNPFLR+ ELP LL++LR YRG + TQLG+RLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  241  lftgvrtgELRLATPDQFDLDRGLWIIPPEVVKQLQVDMRRKRQLPKDIPPYIVPLSVQA  300
            L+TGVRTGELRLATPDQFDL+RGLWIIPPEVVKQLQ +MR++ + P+DIPPYIVPLSVQA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  301  IEIVRHLLEQFKPAQHYLFRHDSELKKRMSENTLNGALKRMGYRDLLTGHGIRGTMSTAL  360
            IEIVR LLEQ KPAQ+ L+ H ++LKKR+SENTLN+AL+RMGY +LLTGHGIRGT+ST+L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  361  NEIGYPKVWVDAQLSHVDPNKVSATYNHAEYVEQRRRMMQDWADRLDLFEQNMVEAASMP  420
            NEIGYPK+WVDAQLSH DPNKVSATYNHA YVE RR+MMQDWADRLDL+EQ  V AAS+ 
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASLH  420

Query  421  LTIHLEGVPVLSDEE  435
            L+IH++G  V ++ E
Sbjct  421  LAIHINGTQVQNESE  435

10) DSC_03650 in NC_016147


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  452 bits (1701),  Expect = 4e-128, Method: Compositional matrix adjust.
 Identities = 280/452 (62%), Positives = 361/452 (80%), Gaps = 4/452 (0%)

Query  1    MALSDVAVRQAKATGTDYTLPDFDGLSLAVSAAGTKTWHFRYTWLGRQKRMSLGVYPEIS  60
            MAL+DVAVRQA++TG DYTLPDFDGLSLAVSA G K+WHFRY W ++QKRMSLG YP +S
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LreartrrdearaLVAKDINPQRQRTRDRQLATQAEQNTFQAVYEKWLKFREQGRLKRGR  120
            LREAR+ RDEARAL AK+INP+ +R +  +    A +N+F+AVY +WL  R    LK GR
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLE-LKEGR  119

Query  121  QTTLATLPRIFGNDVLPTLGKRSIHVITRADLLEIVGRIEKRGAPSVAEKVRTWLNQLFR  180
            Q+TL+ + RIF++DVLP LG  +I  I R++LL++++ IE+RGA + AEKVRTW+ QLFR
Sbjct  120  QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFR  179

Query  181  YALVVVPGLERNPASDLDVVAMPQPPVRHNPFLRMSELPEFLQLLRKYPGRLQTQLGVRM  240
            +A+V   GL  NPASDLDVVA P+PPV HNPFLR+ ELPE+L+ LR Y G + TQLG+R+
Sbjct  180  FAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRL  239

Query  241  LFLTGVRTGELRLATPDQFHLDDGLWIIPPDVVKQLELKMQKENLRTEDIPPYIVPLSLQ  300
            L+LTGVRTGELRLATPDQF+L+ GLWIIPP+VVKQL+  M+K   R +DIPPYIVPLS+Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  301  AVEIVRHMLERFKQGQKHVFPGAKSLKQRISENTLNTAVKRLGYDGRLTGHGIRATLSTT  360
            A+EIVR +LE+ K +Q+H+++    LK+RISENTLN+A++R+GY+G LTGHGIR+TLST 
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  361  LNELGYPDKWIDAQLSHVDPNPVRRTYNHAEYVEQRRCMMQDWADRLDLLEQGQLEAASN  420
            LNE+GYP  W+DAQLSH DPN V  TYNHA YVE RR MMQDWADRLDLLEQG++ AAS 
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGDVKAASL  419

Query  421  PLALHLEGLPMAGDGSN---TQGSPASTTVQT  449
             LA+H++G  +  ++      +GS++++  ++
Sbjct  420  HLAIHINGTQVQNESEGFLAIEGSAGTSVGNS  451

11) xerC in NC_020815


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  412 bits (1551),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 237/363 (66%), Positives = 305/363 (85%), Gaps = 4/363 (1%)

Query  1    MALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYSLGKQKRISLGNYPEVG  60
            MAL+D++VRQA+++ K Y++PD DGL+L V++ GGKSWH+RYY  +KQKR+SLG YP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LREARTLRDEARALVAKGINPHTDRKQKRRAIKLASDYTFKAVFDAWVEHRAKELKEGRN  120
            LREAR+LRDEARAL AKGINP  DRK+K RA++LA++ +FKAV+  W+ HR  ELKEGR+
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  STLSQIQRIFGKDVLPSLERMSIYDIRRPQLLGVLARIERRKAFTTAEKVRTWLSQLFRY  180
            STLSQIQRIF+KDVLP+L  ++I+DIRR++LL+VLA IE+R AFTTAEKVRTW+ QLFR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  ALVIVEGMEANPATDLDVVAEPKPPVSHNPYLRLPELPDFLQKLRLYNPRGWQTQLGIRL  240
            A+V  EG+ +NPA+DLDVVA PKPPV+HNP+LRL ELP++L+KLR Y      TQLGIRL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNI-TTQLGIRL  239

Query  241  LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSVQ  300
            L+LTGVRTGELRLATPDQFDL+RGLWIIPP++VKQLQD MRK GKRP+DIPPYIVPLSVQ
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  301  AVEIVRYLLGVMRPAQKHLLAHRSELVSADVKLTHSAEVKVTHLGHDGGLLKAADVDSGA  360
            A+EIVRYLL  ++PAQ+HLLAHR++L       T +A ++  ++G + GLL + ++ +  
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALR--RMGYE-GLLTGHGIRGTL  356

Query  361  GSG  363
            ++G
Sbjct  357  STG  359

12) int in NC_006513


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  367 bits (1379),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 235/329 (72%), Positives = 286/329 (87%), Gaps = 0/329 (0%)

Query  1    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  60
            MAL+D+AVRQA++TGK YTLPD+DGLSLAV+A GG++WHFRYYWA+KQKRMSLGTYP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LREARSLRDEARALLAKGTNPRVHRKQKRTAVRLADENTFEAVYRKWLKHRGLSLKEGRQ  120
            LREAR+LRDEARAL AKG NP+V+RK+K  AVRLA EN+F AVY +WL HR L LKEGRQ
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  TTLSILPRIFDKDVLPTLGKRSIYEIKRPDLLEVIAKIEKRKALSVAEKVRTWFNQLFRY  180
            +TLS + RIFDKDVLP LG  +I++I+R++LL+V+A IE+R A++ AEKVRTWF QLFR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  ALVIVPGLEQNPASDLDVVALPLPPVNHNPFLRMADLPKLLQRLRKYrgrlqthlglrll  240
            A+V   GL  NPASDLDVVA P PPV HNPFLR+ +LP LL++LR YRG + T+LG+RLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  241  lltgvrtgelrlATPDQFDLDRGLWIIPPDVVKQLQVDMRKKRQLPKDIPPYIVPLSVQA  300
            LLTGVRTGELRLATPDQFDL+RGLWIIPP+VVKQLQ +MRK+ + P+DIPPYIVPLSVQA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  301  TEIVRHMLEQFKPAQHHLFRHDSEMKKRM  329
             EIVR +LEQ KPAQ+HL+ H +++KKR+
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRI  329

13) XOC_2579 in NC_017267


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  337 bits (1265),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 210/347 (61%), Positives = 268/347 (78%), Gaps = 6/347 (1%)

Query  1    MALTDTAVRQARTTGKDYTLNDAHGLLLFVSAKGKKKWHFRFTWMGQQQRIAIAPYPEVG  60
            MALTD AVRQAR TGKDYTL D +GL L VSAKG K WHFR+ W ++Q+R++++ YP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LKVARMRRDELRAHLANGVDPRVHLRQAEKKVLAAATHTFQAVFQSWRDFKALSLKAGRQ  120
            L+ AR  RDE RA  A+G++P+V+ ++  + V  A+ ++F+AV+  W   + L LK GRQ
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  STLSQINRIFAKDVLPWLDTLSIFDVTPTHLLEVLRKIERLHALTTAEKVRTWFNQMFRY  180
            STLSQI+RIF KDVLP L+T++IFD+  ++LL+VL  IE+  A+TTAEKVRTWF Q+FR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  AMVEM-GLPANPASDLDIVAVPKPPVSHNPFLRMEELAAFLRTLRNYRGFKTTRQGIQLL  239
            AMV   GL +NPASDLD+VA PKPPV+HNPFLR++EL+ +LR LR YRG  TT+ GI+LL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  240  FLTGVRTGELRSARPEQFDLDGGLWTIPAVIVKQLQLKMRKEGK---AVPPYVVPLSTQA  296
            +LTGVRTGELR A P+QFDL+ GLW IP+ +VKQLQ  MRK GK    +PPY+VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  297  IAIVRDLLDAQARRPAQRYLLPNRNDPKEPISENTLNGALRRMGCVG  343
            I IVR LL+    +PAQR LL++R D K  ISENTLN+ALRRMG  G
Sbjct  301  IEIVRYLLEQV--KPAQRHLLAHRGDLKKRISENTLNAALRRMGYEG  345

14) PFLU1878 in NC_012660


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  322 bits (1209),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 228/413 (56%), Positives = 310/413 (76%), Gaps = 6/413 (1%)

Query  1    MALTDTAIKQAKPASKPYTLTDGDGLSLQVPTTGSKRWHFRFYWHDKQLRISLGTYPDVS  60
            MALTD A++QA+P++K YTL D DGLSL V++ G+K WHFR+YW  KQ R+SLGTYP VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LKearrrreaaraLVASNIDPRSHRRAERQKASRAVKNTFEAVADRWHEFRSKKLTkskk  120
            L+EAR  R+ ARAL A  I+P+ +R+   +    A  N+F AV  +W   R   L  +++
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  gsagqaskYLKKDMLPCLGDLPIADISRGDVLELIRRIERRGALVSARKVRTWLNQIFRF  180
            ++ +Q  + + KD+LP LG + I DI R+++L+++  IE+RGA+ +A KVRTW+ Q+FRF
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  181  AM--AEGLIDVNPAADLDIVAETPRPVRHNPFLQVNELPGLLRTVTHYEGAEKtrlgirl  238
            AM  AEGL++ NPA+DLD+VA    PV HNPFL+++ELP LLR +  Y G   T+LGIRL
Sbjct  181  AMVKAEGLVG-NPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRL  239

Query  239  llltgvrtgelrAATPDQFDFDKGIWRVPPEGVKQLRNRVRTQGN---EIPPYVIPLSTQ  295
            LLLTGVRTGELR ATPDQFD+++G+W +PPE VKQL++ +R +G+   +IPPY++PLS Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  296  AIAIVQRLMQLRTRGARYLLVHRYEPQEMISENTLNTAISRMGYKGRLTGHGIRATISTA  355
            AI IV+ L++    + R LL HR + +  ISENTLN+A+ RMGY G LTGHGIR+T+ST+
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  356  LNEVGFVEEWIEAQLSHADSNQIRAAYNHAEYVEPRRRMMQYWADLLDALEVG  408
            LNE+G+   W++AQLSHAD+N++ A+YNHA YVEPRR+MMQ WAD LD LE G
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQG  412

15) ECENHK_04640 in NC_018405


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  243 bits (908),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 163/406 (41%), Positives = 264/406 (66%), Gaps = 24/406 (5%)

Query  1    MPLNDMLIRRAKPEDKPYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L D+ +R+A+P +K YTL D +GLSL + ++G+KSW+FRY  A+K K +SLG YP+++
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSRRDEARKLVAEGKNPSEVRKEQKRALQTESENAFEKIAREW-----HQLKSAKW  115
            L EAR+ RDEAR L A G NP   RK++ RA++  +EN+F  +  +W      +LK ++ 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  116  SAGYASDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVF  175
              +  S+I   F +D++P +GT  + +I+  +LL+VL  IE+RGA+    KVR +  ++F
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIATGRADY-NPAADLSSALEVHQS-NHFPFLKADEIPEFLRALEGYTGSKLVQIATK  233
            R+A+  + +   NPA+DL        +  H PFL+ +E+PE+LR L  Y G+   Q++ +
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLMITGVRTIELRAALWQEFDLDNAIWEIPAE---------RMKMRRSH-----LVPLST  279
            LL++TGVRT ELR A  ++FDL+ ++W IP+E         R + +R++     +VPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QALDLLN-ELKTMTGNYRYVFPGRNDPNKPMSEASINQVIKRIGYGGKVTGHGFRHTLST  338
            QA++++   L  +    R +++ R D +K +SE ++N  ++R+GY G +TGHG+R TLST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  VLHEKGYDSVWIETQLAHVDKNTIRGTYNHAQYIDNRKCMLQSYAD  384
             L+E GY  +W+++QL+H D N + +TYNHA Y++ R+ M+Q  AD
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWAD  404

16) PAU_02730 in NC_012962


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  243 bits (908),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 168/415 (41%), Positives = 269/415 (65%), Gaps = 24/415 (5%)

Query  1    MKLTDLAIKRAKPKEKAYTLADGNGLSLLIDTKGSKGWRYRYQFAGKTKMISLGVYPVVT  60
            M LTD+A+++A+P  K YTL+D +GLSL + +KG+K+W++RY  A+K K +SLG YP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LTEARAKRDEARKLVANGINPSEARKAEKTAAINQTEHTFKNIALEWYNSRKDRWSVGYR  120
            L EARA RDEAR L A+GINP   RK    A    TE++FK + L+W   R+     G R
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEG-R  119

Query  121  EDMMSA----FENDVFPYIGDRPIAEIKPLELLEVLSIMEKRGTTEKLKKVRQRCGEVWK  176
            +  +S     F++DV+P +G   I +I+  +LL+VL+ +E+RG+     KVR +  ++ +
Sbjct  120  QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFR  179

Query  177  YAIITGRAEY-NPAPDLASAFIPHKR-EHYAHLSVGELPEFLRSIDKYMGSQIVRTALRI  234
            +A++ + +   NPA+DL     P     H + L + ELPE+LR +  Y G+   + ++R+
Sbjct  180  FAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRL  239

Query  235  LILTGVRPGELRKAEWSEIDLDKAIWEISAEKMK-----MRR---------AHIVPLSEQ  280
            L+LTGVR GELR A   ++DL++++W I++E +K     MR+         + IVPLS Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  281  VINLLK-QIQPISGSYQYVFPSRTDYRKHLSDMALNTMIRRMGYSGRATGHGFRHTMSTI  339
             I++++  ++ +  + + +++ R D +K++S+ +LN+ +RRMGY G  TGHG+R T+ST 
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  340  LHEQNYPSEWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQ-WYADYMDALERGE  393
            L+E  YP  W+++QL+H D N + +TYNHA Y++ RR M+Q W AD +D LE+G+
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRLDLLEQGD  413

17) SerAS12_4096 in NC_015566


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  242 bits (902),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 169/417 (41%), Positives = 266/417 (64%), Gaps = 28/417 (6%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ +R+++P +K YTL+D +GLS+ + ++G+K+W+FRY   +K K +SLGTYP+VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSE---  117
            L +AR  RDEA+ L A GINP   RK++ R  +  T N+F ++  +W   RR    E   
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  118  SYAEEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKY  177
            S   ++ + F+ DV+P +G   I +I+  +L++ L+ +++RGA     KVR +  ++ ++
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AIVTGRAEY-NPAPDLASAFSPHKK-EHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLL  235
            A+V + +   NPA+DL    +P     H +FL + ELP+++R +  Y G++  +L++RLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  IITGTRPGELRKAEWSEFDFDNRLWEVPPE---------RMKKRRPH-----CVPLSDQA  281
            ++TG R GELR A   +FD++  LW +PPE         R + +RP+      VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  ISI----LEQLKPLTGHYSYVFPGRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMS  337
            I I    LEQ+KP   H   +++ R +  K ISE ++N  +RR+GY G +TGHG+R T+S
Sbjct  301  IEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLS  357

Query  338  TILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQ-WYADYIDALERGD  393
            T L+E GY   W+++QL+H D N + +TYNHA Y++ RR M+Q W AD +D LE+GD
Sbjct  358  TGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRLDLLEQGD  413

18) SerAS13_4096 in NC_017573


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  242 bits (902),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 169/417 (41%), Positives = 266/417 (64%), Gaps = 28/417 (6%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ +R+++P +K YTL+D +GLS+ + ++G+K+W+FRY   +K K +SLGTYP+VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSE---  117
            L +AR  RDEA+ L A GINP   RK++ R  +  T N+F ++  +W   RR    E   
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  118  SYAEEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKY  177
            S   ++ + F+ DV+P +G   I +I+  +L++ L+ +++RGA     KVR +  ++ ++
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AIVTGRAEY-NPAPDLASAFSPHKK-EHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLL  235
            A+V + +   NPA+DL    +P     H +FL + ELP+++R +  Y G++  +L++RLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  IITGTRPGELRKAEWSEFDFDNRLWEVPPE---------RMKKRRPH-----CVPLSDQA  281
            ++TG R GELR A   +FD++  LW +PPE         R + +RP+      VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  ISI----LEQLKPLTGHYSYVFPGRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMS  337
            I I    LEQ+KP   H   +++ R +  K ISE ++N  +RR+GY G +TGHG+R T+S
Sbjct  301  IEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLS  357

Query  338  TILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQ-WYADYIDALERGD  393
            T L+E GY   W+++QL+H D N + +TYNHA Y++ RR M+Q W AD +D LE+GD
Sbjct  358  TGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRLDLLEQGD  413

19) SerAS9_4095 in NC_015567


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  242 bits (902),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 169/417 (41%), Positives = 266/417 (64%), Gaps = 28/417 (6%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ +R+++P +K YTL+D +GLS+ + ++G+K+W+FRY   +K K +SLGTYP+VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSE---  117
            L +AR  RDEA+ L A GINP   RK++ R  +  T N+F ++  +W   RR    E   
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  118  SYAEEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKY  177
            S   ++ + F+ DV+P +G   I +I+  +L++ L+ +++RGA     KVR +  ++ ++
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AIVTGRAEY-NPAPDLASAFSPHKK-EHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLL  235
            A+V + +   NPA+DL    +P     H +FL + ELP+++R +  Y G++  +L++RLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  IITGTRPGELRKAEWSEFDFDNRLWEVPPE---------RMKKRRPH-----CVPLSDQA  281
            ++TG R GELR A   +FD++  LW +PPE         R + +RP+      VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  ISI----LEQLKPLTGHYSYVFPGRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMS  337
            I I    LEQ+KP   H   +++ R +  K ISE ++N  +RR+GY G +TGHG+R T+S
Sbjct  301  IEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLS  357

Query  338  TILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQ-WYADYIDALERGD  393
            T L+E GY   W+++QL+H D N + +TYNHA Y++ RR M+Q W AD +D LE+GD
Sbjct  358  TGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRLDLLEQGD  413

20) intS in NC_013892


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  241 bits (900),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 167/414 (41%), Positives = 265/414 (65%), Gaps = 22/414 (5%)

Query  1    MKLTDMAIKRAKPKEKSYMLADGNGLSLLVETNGSKGWRYRYQFTGKTKMISLGIYPVVT  60
            M LTD+A+++A+P  K Y L+D +GLSL V ++G+K+W++RY  ++K K +SLG YP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LTEARAKRDEARKQVANGINPSEARKAEKVASISQSENTFKNIALEWYEGRKDRWSVGYR  120
            L EARA RDEAR   A+GINP   RK    A    +EN+FK + L+W   R+     G +
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  DDMMD---AFEKDVFPYIGDRPIADIKPMELLEVLSVMEKRGTTEKLKKVRQRCGEVWKY  177
              + +    F+KDV+P +G   I DI+  +LL+VL+ +E+RG+     KVR +  ++ ++
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AIITGRAEY-NPAPDLASAFVPHKR-EHYAHLSVSELPEFLSSIDKYMGSQIVRVALRIL  235
            A++ + +   NPA+DL     P     H + L + ELPE+L  +  Y G+   ++++R+L
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  ILTGVRPGELRKAEWSEINFDIGIWEIPAEKMK-----MRR---------PHIVPLSEQV  281
            +LTGVR GELR A   +++++ G+W IP+E +K     MR+         P IVPLS Q 
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  IELLK-QIHPISGSYQYIFPSRTDYRKHISDMALNTMIRRMGYSGRATGHGFRHTMSTIL  340
            IE+++  ++ +  + + +++ R D +K+IS+ +LN+ +RRMGY G  TGHG+R T+ST L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  341  HEQGYNTAWIEAQLAHVDKNSIRGTYNHAQYLDGRREMLQ-WYADYMETLERGE  393
            +E GY   W++AQL+H D N + +TYNHA Y++ RR M+Q W AD ++ LE+G+
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRLDLLEQGD  413

21) Spro_3887 in NC_009832


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  239 bits (891),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 168/417 (41%), Positives = 264/417 (64%), Gaps = 28/417 (6%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ +R+++P +K YTL+D +GLS+ + ++G+K+W+FRY   +K K +SLGTYP+VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LTDARQKRDEAKKLVVSGINPSEARKQQKRDRQDVTGNTFEGIAREWYEKRRDRWSE---  117
            L +AR  RDEA+ L   GINP   RK++ R  +  T N+F ++  +W   RR    E   
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  118  SYAEEMMKTFESDVFPYIGNRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKY  177
            S   ++ + F+ DV+P +G   I +I+  +L++ L+ +++RGA     KVR +  ++ ++
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AIVTGRAEY-NPAPDLASAFSPHKK-EHYAFLSVAELPEFFRIFNTYTGSLIVKLAMRLL  235
            A+V + +   NPA+DL    +P     H +FL + ELPE++R +  Y G++  +L++RLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  IITGTRPGELRKAEWSEFDFDNRLWEVPPE---------RMKKRRPH-----CVPLSDQA  281
            ++TG R GELR A   +FD++  LW +PPE         R + +RP+      VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  ISI----LEQLKPLTGHYSFVFPGRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMS  337
            I I    LEQ+KP   H   +++ R +  K ISE ++N  +RR+GY G +TGHG+R T+S
Sbjct  301  IEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLS  357

Query  338  TILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQ-WYADYMDSLELGG  393
            T L+E GY   W+++QL+H D N + +TYNHA Y++ RR M+Q W AD +D LE G+
Sbjct  358  TGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRLDLLEQGD  413

22) A79E_0092 in NC_018522


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  238 bits (887),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 162/404 (41%), Positives = 260/404 (65%), Gaps = 25/404 (6%)

Query  1    MALTDIQIKRAKPQEKPYTLNDGQGLSLLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P  K YTL D +GLSL +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRETSRKQVANGIDPVEERKSQKLAQKLSTENSFEAICREWHTN-----KADRW  115
            L EAR  R+ +R   A+GI+P  +RK +  A +L+TENSF A+  +W ++     K +R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  116  TVAYREEIIKTFEKDVFPFIGKRPNSEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVY  175
              +   +I + F+KDV+P +G     +I+  +LL+VL  IE+RGA+  + KVR +  +++
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIITGRAEY-NPAPDLAIALAV-PKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATK  233
            R+A++ + +   NPA+DL +  A  P   H+PFL  +ELP+++R L  Y G+I T+ + +
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  IIMLTGVRTQEMRFATGDEIDLEKAIWEIPAERMK-----MRR---------PHIVPLST  279
            +++LTGVRT E+R+AT D++DLE+++W IP+E +K     MR+         P IVPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QVIDLFR-QLKPITGHYPYIFIGRKNRSKPISKESVSQVIELLGYKGRATGHGFRHTMST  338
            Q I++ R  L  +      ++  R +  K IS ++++  +  +GY G  TGHG+R T+ST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ILHEQGFDSAWIEMQLAHVDKNKIRGIYNHAQYIEDRTKMMQ-W  381
             L+E G+   W++ QL+H D NK+ + YNHA Y+E R KMMQ W
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

23) KP1_5380 in NC_012731


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  238 bits (887),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 162/404 (41%), Positives = 260/404 (65%), Gaps = 25/404 (6%)

Query  1    MALTDIQIKRAKPQEKPYTLNDGQGLSLLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P  K YTL D +GLSL +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRETSRKQVANGIDPVEERKSQKLAQKLSTENSFEAICREWHTN-----KADRW  115
            L EAR  R+ +R   A+GI+P  +RK +  A +L+TENSF A+  +W ++     K +R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  116  TVAYREEIIKTFEKDVFPFIGKRPNSEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVY  175
              +   +I + F+KDV+P +G     +I+  +LL+VL  IE+RGA+  + KVR +  +++
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIITGRAEY-NPAPDLAIALAV-PKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATK  233
            R+A++ + +   NPA+DL +  A  P   H+PFL  +ELP+++R L  Y G+I T+ + +
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  IIMLTGVRTQEMRFATGDEIDLEKAIWEIPAERMK-----MRR---------PHIVPLST  279
            +++LTGVRT E+R+AT D++DLE+++W IP+E +K     MR+         P IVPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QVIDLFR-QLKPITGHYPYIFIGRKNRSKPISKESVSQVIELLGYKGRATGHGFRHTMST  338
            Q I++ R  L  +      ++  R +  K IS ++++  +  +GY G  TGHG+R T+ST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ILHEQGFDSAWIEMQLAHVDKNKIRGIYNHAQYIEDRTKMMQ-W  381
             L+E G+   W++ QL+H D NK+ + YNHA Y+E R KMMQ W
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

24) SEEH1578_21245 in NC_021810


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  238 bits (887),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 166/406 (41%), Positives = 261/406 (65%), Gaps = 20/406 (4%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  60
            M L+D+ +++A+P +K YTL D  GLSL + + G+K+W+FRY  A+K K +S+G Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEG--  118
            L +ARA RDEAR++ AKGINP   RK +  A+++A ENSF +V  +W + ++    EG  
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  119  -YAKEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRY  177
                ++    ++D++P +G   I +I   +LL VL  IE+RGA+  + K+R +  +++R+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AVATGRAKY-NFAPDLA-IALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLL  235
            A+  + +   N A+DL  +A  KP   H PFL   ELPE++  L  Y+G++ T+ + +LL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  MLTGVRTIELRAAEWAEFDLDNALWEIPKE---------RMKKRRPH-----LVPLSTQA  281
            +LTGVRT ELR A   +FDL+ +LW IP E         R + +RP+     +VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  ISILK-KLQEITGNYSLVFPGRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTIL  340
            I I++  L+++      +++ R D++K +SE ++N  ++ +GY+G LTGHG+R T+ST L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  341  HELGFESAWIEMQLAHVDKNSIRGTYNHAQYLENRRKMMQIYSDML  386
            +E+G+   W++ QL+H D N + +TYNHA Y+E RRKMMQ  +D L
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

25) EcHS_A0329 in NC_009800


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 170/405 (42%), Positives = 259/405 (64%), Gaps = 27/405 (6%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L    V  A+P  K Y L+D  GL L V + G++ W+ +Y   +K+KRM++G YPAVS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAQARALRDDAKKKLAEGIDPSLAKKEEKLVRDVQL--NNTFQAVALEWHGTKVSRWSEG  118
            L +ARALRD+A+   A GI+P + +K+   +R V+L  +N+F+AV L+W + +     EG
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHK--LRAVRLATENSFKAVYLQWLAHRRLELKEG  118

Query  119  YASDIIE---AFNKDIFPYIGQQPVNEIKPLVLLNVLRRIESRGATEKAKKVRQRCSEVF  175
              S + +    F+KD++P +G   + +I+   LL+VL  IE RGA   A KVR +  ++F
Sbjct  119  RQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIVTGRAEY-NPAADLTSAMSGHES-KHYPFLTVEELPDFFKALAGYTGSPLVVLAAR  233
            R+A+V + +   NPA+DL    +   +  H PFL ++ELP++++ L  Y G+    L+ R
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLILTGVRTGELRGAFWSEFDLEKAVWEIPAE---------RMKMKRPH-----LVPLST  279
            LL+LTGVRTGELR A   +FDLE+++W IP+E         R + KRP+     +VPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QALEIVQQL--KVMSGQYPLVFPGRNDPRKTMSEASINQVFKRIGYTGRVTGHGFRHTMS  337
            QA+EIV+ L  +V ++Q  L ++ R D +K +SE ++N  ++R+GY G +TGHG+R T+S
Sbjct  299  QAIEIVRYLLEQVKPAQRHL-LAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLS  357

Query  338  TILHEEGFNTAWIETQLAHVDKNAIRGTYNHALYLEGRREMMQ-W  381
            T L+E G+   W+++QL+H D N + +TYNHALY+E RR MMQ W
Sbjct  358  TGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

26) EcSMS35_0299 in NC_010498


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 168/404 (42%), Positives = 255/404 (64%), Gaps = 25/404 (6%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L    V  A+P  K Y L+D  GL L V + G++ W+ +Y   +K+KRM++G YPAVS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQL--NNTFQAVALEWHGTKVSRWSEG  118
            L +ARALRDEA+   A GI+P   +K+   +R V+L  +N+F+AV L+W + +     EG
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHK--LRAVRLATENSFKAVYLQWLAHRRLELKEG  118

Query  119  YASDIIE---AFNKDIFPYIGQLPVNDIKPLVLLNVLRRMESRGATEKAKKVRQRCSEVF  175
              S + +    F+KD++P +G + + DI+   LL+VL  +E RGA   A KVR +  ++F
Sbjct  119  RQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIVTGRAEY-NPAADLTSAMSGHES-KHYPFLTVEELPDFFKALAGYTGSPLVVLAAR  233
            R+A+V + +   NPA+DL    +   +  H PFL ++ELP++++ L  Y G+    L+ R
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLILTGVRTGELRGAFWSEFDLEKAVWEIPAE---------RMKMKRPH-----LVPLST  279
            LL+LTGVRTGELR A   +FDLE+++W IP+E         R + KRP+     +VPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QALEIVQ-QLKVISGQYPLVFPGRNDPRKTMSEASMNQVFKRIGYTGKVTGHGFRHTMST  338
            QA+EIV+  L  +      +++ R D +K +SE ++N  ++R+GY G +TGHG+R T+ST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ILHEEGFNTAWIETQLAHVDKNAIRGTYNHALYLEGRREMMQ-W  381
             L+E G+   W+++QL+H D N + +TYNHALY+E RR MMQ W
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

27) CFSAN002069_19870 in NC_021812


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 166/406 (41%), Positives = 261/406 (65%), Gaps = 20/406 (4%)

Query  17   MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  76
            M L+D+ +++A+P +K YTL D  GLSL + + G+K+W+FRY  A+K K +S+G Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  77   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEG--  134
            L +ARA RDEAR++ AKGINP   RK +  A+++A ENSF +V  +W + ++    EG  
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  135  -YAKEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRY  193
                ++    ++D++P +G   I +I   +LL VL  IE+RGA+  + K+R +  +++R+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  194  AVATGRAKY-NFAPDLA-IALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLL  251
            A+  + +   N A+DL  +A  KP   H PFL   ELPE++  L  Y+G++ T+ + +LL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  252  MLTGVRTIELRAAEWAEFDLDNALWEIPKE---------RMKKRRPH-----LVPLSTQA  297
            +LTGVRT ELR A   +FDL+ +LW IP E         R + +RP+     +VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  298  ISILK-KLQEITGNYSLVFPGRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTIL  356
            I I++  L+++      +++ R D++K +SE ++N  ++ +GY+G LTGHG+R T+ST L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  357  HELGFESAWIEMQLAHVDKNSIRGTYNHAQYLENRRKMMQIYSDML  402
            +E+G+   W++ QL+H D N + +TYNHA Y+E RRKMMQ  +D L
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

28) SeHA_C2638 in NC_011083


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 166/406 (41%), Positives = 261/406 (65%), Gaps = 20/406 (4%)

Query  17   MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  76
            M L+D+ +++A+P +K YTL D  GLSL + + G+K+W+FRY  A+K K +S+G Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  77   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEG--  134
            L +ARA RDEAR++ AKGINP   RK +  A+++A ENSF +V  +W + ++    EG  
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  135  -YAKEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRY  193
                ++    ++D++P +G   I +I   +LL VL  IE+RGA+  + K+R +  +++R+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  194  AVATGRAKY-NFAPDLA-IALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLL  251
            A+  + +   N A+DL  +A  KP   H PFL   ELPE++  L  Y+G++ T+ + +LL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  252  MLTGVRTIELRAAEWAEFDLDNALWEIPKE---------RMKKRRPH-----LVPLSTQA  297
            +LTGVRT ELR A   +FDL+ +LW IP E         R + +RP+     +VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  298  ISILK-KLQEITGNYSLVFPGRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTIL  356
            I I++  L+++      +++ R D++K +SE ++N  ++ +GY+G LTGHG+R T+ST L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  357  HELGFESAWIEMQLAHVDKNSIRGTYNHAQYLENRRKMMQIYSDML  402
            +E+G+   W++ QL+H D N + +TYNHA Y+E RRKMMQ  +D L
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

29) EC042_3992 in NC_017626


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  236 bits (881),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 166/409 (41%), Positives = 269/409 (66%), Gaps = 35/409 (8%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P +K YTL D +GLSL +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRDIARKQVANGIDP-VEERKALRLAQKLSTENSFEAICREWHTN-----KADR  114
            L EAR  RD AR   A+GI+P V+ +  LR A +L+TENSF A+  +W ++     K +R
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLR-AVRLATENSFKAVYLQWLAHRRLELKEGR  119

Query  115  WTVAYREEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEV  174
               +   +I + F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  ++
Sbjct  120  --QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQL  177

Query  175  YRYAIITGRAEY-NPAPDLAIALAVPKQ--KHHPFLSAEELPHFIRDLEAYTGSIITKNA  231
            +R+A++ + +   NPA+DL + +A PK    H+PFL  +ELP+++R L  Y G+I T+ +
Sbjct  178  FRFAMVKAEGLVGNPASDLDV-VAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLG  236

Query  232  TKIVMLTGVRTQEMRFATWEEVDLEKGIWEIPAE---------RMKMRRPH-----IVPL  277
             ++++LTGVRT E+R+AT ++ DLE+G+W IP+E         R + +RP+     IVPL
Sbjct  237  IRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPL  296

Query  278  STQVVD----LFKQLKPITGHYPYIFIGRNNRNKPISKESVSQVIESLGYKGRATGHGFR  333
            S Q ++    L+ Q+KP   H   ++  R + +K IS ++++  +  +GY G  TGHG+R
Sbjct  297  SVQAIEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIR  353

Query  334  HTMSTILHEQGFDSAWIEMQLAHVDKNSIRGTYNHAQYLEGRKKMM-NW  381
             T+ST L+E G+   W++ QL+H D N + +TYNHA Y+E R+KMM +W
Sbjct  354  GTLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

30) PC1_3281 in NC_012917


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  236 bits (881),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 163/404 (41%), Positives = 257/404 (64%), Gaps = 25/404 (6%)

Query  1    MALNDMQVRSAKPEEKPYTLGDGLGLSLLIEPTGSKSWRFRYRFGGKPKMISFGAYPLVS  60
            MAL D+ VR A+P  K YTL D  GLSL + + G+KSW+FRY  ++K K +S+G+YP VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARKKRDEARKQVLDGINPSEQRKAQKLNLMSESENTFEIIACEWHA-----MKSARW  115
            L EAR  RDEAR     GINP  +RK +   +   +EN+F  +  +W A     +K +R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  116  SAGYASDIMEAFRNDIFPYVGKRSIAEIKPLELLNVLRKMEKRGALEKMKKVRQRCSEVF  175
              +  S+I   F +D++P +G  +I +I+  +LL+VL  +E+RGA+    KVR +  ++F
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIATGRAEI-NPAADLTSVLTTHKA-QHYPFLKADEIPTFIQAVESYTGSVLVQIAAK  233
            R+A+  + + + NPA+DL  V +   +  H PFL+ +E+P +++ +  Y G++  Q++ +
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLMLTGVRTIELRAAEWSEFDLEHAIWEIPAE---------RMKKRRSH-----LVPLST  279
            LL+LTGVRT ELR A   +FDLE+++W IP+E         R + +R++     +VPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QALSLLS-KLQTISGNYKYVFPGRNDPNKPMSEGSINRMIKHIGYEGRLTGHGFRHTMST  338
            QA+ ++   L+ +    + +++ R D +K +SE ++N  ++++GYEG LTGHG+R T+ST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ILHEKGYDSAWIEMQLAHVDKNSIRGTYNHALYLEQRRDMMQ-W  381
             L+E GY   W++ QL+H D N + +TYNHALY+E RR MMQ W
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

31) AvCA6_40500 in NC_021150


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 174/415 (42%), Positives = 259/415 (63%), Gaps = 24/415 (5%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+D A+R A+P  K Y L+D +GL L V++ G+K W++RY   ++ K ++LG YPAV+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAE-QEAQQSDGLTFETLAREWHAYR-----APRW  114
            L+ AR LRD AR L A G +P  +RK   +  + +   +F ++  +W A R       R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  115  AKSTADKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIF  174
             +ST  +    ++ D+LP LG   +  I R++L+++L  IE+RGA   A K R W+ Q+F
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  175  RFGLAKG-SVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIR  233
            RF++ K+ ++ +NPA+DLDVVAA  P+  H+P + + ELPELL K+     N+ T+ +IR
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLVLTGVRPGELRAAPWSEFDLKAAVWTIPKE---------RMKARRPH-----IVPLPR  279
            LL+LTGVR GELR A   +FDL  ++W IP E         R +++RP+     IVPL+ 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QAMAILR-ELQEITGAYELVFAGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLST  338
            QA+ I+R  L+++  A   ++A R +  + +SENT+N AL   GY G  TGHG+R  LST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ELNSRGYNRDWIERQLAHGDQDEMRDTYNHATYLEQRRDMMQAWADSIDALCAGA  393
             LN  GY + W++ QL+H+D + +  TYNHA Y+E RR MMQ WAD +D L  G 
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGD  413

32) AvCA_40500 in NC_021149


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 174/415 (42%), Positives = 259/415 (63%), Gaps = 24/415 (5%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+D A+R A+P  K Y L+D +GL L V++ G+K W++RY   ++ K ++LG YPAV+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAE-QEAQQSDGLTFETLAREWHAYR-----APRW  114
            L+ AR LRD AR L A G +P  +RK   +  + +   +F ++  +W A R       R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  115  AKSTADKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIF  174
             +ST  +    ++ D+LP LG   +  I R++L+++L  IE+RGA   A K R W+ Q+F
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  175  RFGLAKG-SVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIR  233
            RF++ K+ ++ +NPA+DLDVVAA  P+  H+P + + ELPELL K+     N+ T+ +IR
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLVLTGVRPGELRAAPWSEFDLKAAVWTIPKE---------RMKARRPH-----IVPLPR  279
            LL+LTGVR GELR A   +FDL  ++W IP E         R +++RP+     IVPL+ 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QAMAILR-ELQEITGAYELVFAGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLST  338
            QA+ I+R  L+++  A   ++A R +  + +SENT+N AL   GY G  TGHG+R  LST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ELNSRGYNRDWIERQLAHGDQDEMRDTYNHATYLEQRRDMMQAWADSIDALCAGA  393
             LN  GY + W++ QL+H+D + +  TYNHA Y+E RR MMQ WAD +D L  G 
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGD  413

33) Avin_40500 in NC_012560


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 174/415 (42%), Positives = 259/415 (63%), Gaps = 24/415 (5%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+D A+R A+P  K Y L+D +GL L V++ G+K W++RY   ++ K ++LG YPAV+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAE-QEAQQSDGLTFETLAREWHAYR-----APRW  114
            L+ AR LRD AR L A G +P  +RK   +  + +   +F ++  +W A R       R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  115  AKSTADKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIF  174
             +ST  +    ++ D+LP LG   +  I R++L+++L  IE+RGA   A K R W+ Q+F
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  175  RFGLAKG-SVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIR  233
            RF++ K+ ++ +NPA+DLDVVAA  P+  H+P + + ELPELL K+     N+ T+ +IR
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLVLTGVRPGELRAAPWSEFDLKAAVWTIPKE---------RMKARRPH-----IVPLPR  279
            LL+LTGVR GELR A   +FDL  ++W IP E         R +++RP+     IVPL+ 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QAMAILR-ELQEITGAYELVFAGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLST  338
            QA+ I+R  L+++  A   ++A R +  + +SENT+N AL   GY G  TGHG+R  LST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ELNSRGYNRDWIERQLAHGDQDEMRDTYNHATYLEQRRDMMQAWADSIDALCAGA  393
             LN  GY + W++ QL+H+D + +  TYNHA Y+E RR MMQ WAD +D L  G 
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQGD  413

34) EcSMS35_4002 in NC_010498


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 168/413 (41%), Positives = 271/413 (66%), Gaps = 34/413 (8%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P +K YTL D +GLSL +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRDIARKQVANGIDP-VEERKALRLAQKLSTENSFEAICREWHTN-----KADR  114
            L EAR  RD AR   A+GI+P V+ +  LR A +L+TENSF A+  +W ++     K +R
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLR-AVRLATENSFKAVYLQWLAHRRLELKEGR  119

Query  115  WTVAYREEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEV  174
               +   +I + F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  ++
Sbjct  120  --QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQL  177

Query  175  YRYAIITGRAEY-NPAPDLAIALAV-PKQKHHPFLSAEELPHFIRDLEAYTGSIITKNAT  232
            +R+A++ + +   NPA+DL +  A  P   H+PFL  +ELP+++R L  Y G+I T+ + 
Sbjct  178  FRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGI  237

Query  233  KIVMLTGVRTQEMRFATWEEVDLEKGIWEIPAE---------RMKMRRPH-----IVPLS  278
            ++++LTGVRT E+R+AT ++ DLE+G+W IP+E         R + +RP+     IVPLS
Sbjct  238  RLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLS  297

Query  279  TQVVD----LFKQLKPITGHYPYIFIGRNNRSKPISKESVSQVIELIGYKGRATGHGFRH  334
             Q ++    L+ Q+KP   H   ++  R +  K IS ++++  +  +GY G  TGHG+R 
Sbjct  298  VQAIEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRG  354

Query  335  TMSTILHEQGFDSAWIEIQLAHVDKNRIRGTYNHAQYLEHRKKMMQ-WYSDKL  386
            T+ST L+E G+   W++ QL+H D N++ +TYNHA Y+E R+KMMQ W +D+L
Sbjct  355  TLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRL  406

35) PC1_2828 in NC_012917


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 163/403 (41%), Positives = 263/403 (66%), Gaps = 21/403 (5%)

Query  1    MLLTDLKIKKAKAQDKPYTLNDGNGLSLLIDPKGTKGWRFRYQFANKPKLISFGTYDTVS  60
            M LTD+ +++A++ +K YTL D +GLSL + +KG K+W+FRY  A K K +S+GTY +VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LADARKKRDEARSMLANGINPSDARRADKLSLLFSTENTFEAVAREWHTSK---LTTWSE  117
            L +AR  RDEAR++ A+GINP   R+    ++ ++TEN+F AV  +W + +   L    +
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  118  GYAKEVIHYLEKEIFPFLGKRPIDQITPLELLAVLQKIEKRGALEQASKIRRRCGEVFRY  177
            +   ++ + ++K+++P LG   I +I   +LL VL  IE+RGA+  A K+R +  ++FR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AVVTGRAMY-NPAPDLDLASAMNKPKNNHFPFLTESELPDFVQALNNYKGSQITKYATQL  236
            A+V + ++  NPA+DLD+ +A  KP   H PFL   ELP++++ L  Y+G+  T+ + +L
Sbjct  181  AMVKAEGLVGNPASDLDVVAA-PKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRL  239

Query  237  LMLTGVRTIELRAAEWVEFDLDNALWEIPKE---------RMKKRRPH-----LVPLSTQ  282
            L+LTGVRT ELR A   +FDL+ +LW IP E         R + +RP+     +VPLS Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  283  AVTILK-ELKVLTGYYQLVFPGRNDTRKPMSDAAINKVIKMLGYHGRLTGHGFRHTMSTI  341
            A+ I++  L  +    + +++ R D +K +S+ ++N  ++ +GY+G LTGHG+R T+ST 
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  342  LHEHGFNSAWIETQLAHVDKNSIRGTYNHAQYLEGRREMLQ-W  383
            L+E G+   W+++QL+H D N + +TYNHA Y+E RR M+Q W
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

36) SMWW4_v1c00920 in NC_020211


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  234 bits (873),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 164/406 (41%), Positives = 267/406 (66%), Gaps = 29/406 (7%)

Query  1    MLLTDIQIRRSKPQEKPYTLNDGQGLSLLINTDGSKGWRFRYRYAGKAKLMSFGTYPLVT  60
            M LTD+ +R+++P  K YTL D +GLSL +++ G+K+W+FRY  A+K K MS+GTYP V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LADAREKRGEARKQVANGIDPVAEKKAQKLARKLSVENSFEAISREWHTNK------ANR  114
            L +AR  R+EAR   A+GI+P  ++K +  A +L+ ENSF A+  +W +++      + +
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  115  WTLAYREEIMRTFEQDVFPYIGQRPIAEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEV  174
             TL+   +I R F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  ++
Sbjct  121  STLS---QIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQL  177

Query  175  FRYAIITGRAEY-NPAPDLASALAVPKQ--KHHPFLSAEELPYFVKDLEGYTGSIITKNA  231
            FR+A++ + +   NPA+DL   +A PK    H+PFL  +ELP +++ L  Y G+I T+ +
Sbjct  178  FRFAMVKAEGLVGNPASDL-DVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLG  236

Query  232  AKIVMLTGVRTQEMRFATWEEIDFERGIWEIPAE---------RMKMRRPH-----IVPL  277
             ++++LTGVRT E+R+AT +++D+ERG+W IP+E         R + +RP+     IVPL
Sbjct  237  IRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPL  296

Query  278  STQAVELLK-QLQPITGHYPYIFIGRNNRRKPISKESVNQVIELLGYKGRATGHGFRHTM  336
            S QA+E+++  L+ +      ++  R + +K IS +++N  +  +GY G  TGHG+R T+
Sbjct  297  SVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTL  356

Query  337  STILHEQGFDSAWIEMQLAHVDKNGIRGTYNHAQYLEKRRVMLQ-W  381
            ST L+E G+   W++ QL+H D N + +TYNHA Y+E RR M+Q W
Sbjct  357  STGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

37) ETAF_0751 in NC_017309


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  234 bits (872),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 165/404 (41%), Positives = 253/404 (63%), Gaps = 25/404 (6%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L    V  A+P  K Y L+D  GL L V + G++ W+ +Y   +K+KRM++G YPAVS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQL--NNTFQSVALEWHGTKVSRWSEG  118
            L +ARALRDEA+   A GI+P   +K+   +R V+L  +N+F++V L+W + +     EG
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHK--LRAVRLATENSFKAVYLQWLAHRRLELKEG  118

Query  119  ---YTSDILEAFNKDIFPYIGQQPVNEIKPLVLLHVLRRMESRGATEKAKKVRQRCSEVF  175
                 S+I   F+KD++P +G   + +I+   LL+VL  +E RGA   A KVR +  ++F
Sbjct  119  RQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIVTGRAEY-NPAADLTSAMSGHES-KHYPFLTVEKLPDFFKALSSYTGSPLVVLAAR  233
            R+A+V + +   NPA+DL    +   +  H PFL ++ LP++++ L  Y G+    L+ R
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLILTGVRTGELRGAFWSEFDLEKAVWEIPAE---------RMKMKRPH-----LVPLST  279
            LL+LTGVRTGELR A   +FDLE+++W IP+E         R + KRP+     +VPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QALEIVQ-QLKVMSGQYPQVFPGRNDPRKTMSEASINQVFKRIGYTGKVTGHGFRHTMST  338
            QA+EIV+  L  +     ++++ R D +K +SE ++N  ++R+GY G +TGHG+R T+ST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  ILHEEGFNTAWIETQLAHVDKNAIRGTYNHAQYLEGRREMMQ-W  381
             L+E G+   W+++QL+H D N + +TYNHA Y+E RR MMQ W
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

38) ECO26_4941 in NC_013361


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  234 bits (872),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 168/414 (41%), Positives = 269/414 (65%), Gaps = 36/414 (8%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P +K YTL D +GLSL +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKAQKLAQKLSTKNSFESVSREWHAAKADRWTLAYR  120
            L EAR  RD AR   A+GI+P  +RK +  A +L+T NSF +V  +W A +     L  +
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHR----RLELK  116

Query  121  E-------EIIKTFEQDVFPFIGKRPIAEIKPLELLEVLKRIEKRGALEKTRKVRQRCGE  173
            E       +I + F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  +
Sbjct  117  EGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQ  176

Query  174  VFRYAIITGRAEY-NPAPDLAIALAVPKQ--KHHPFLSAEELPHFVRDLEAYTGSIITKN  230
            +FR+A++ + +   NPA+DL + +A PK    H+PFL  +ELP+++R L  Y G+I T+ 
Sbjct  177  LFRFAMVKAEGLVGNPASDLDV-VAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  ATKIVMLTGVRTQEMRFATWQELDLEKGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++++LTGVRT E+R+AT +++DLE+GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSRQVIR----LFQQLKPITGHYPYIFIGRNNRKKPISKESINQVIELLGFKGRITGHGF  332
            LS Q I     L++Q+KP   H   ++  R + KK IS +++N  +  +G+ G +TGHG+
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGI  352

Query  333  RHTMSTILHEAGFNSAWIEMQLAHVDKNSIRGVYNHAQYLNGRSRMLQFYADKL  386
            R T+ST L+E G+   W++ QL+H D N + + YNHA Y++ R +M+Q  AD+L
Sbjct  353  RGTLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

39) SEEH1578_04845 in NC_021810


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  234 bits (872),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 168/414 (41%), Positives = 269/414 (65%), Gaps = 36/414 (8%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P +K YTL D +GLSL +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKAQKLAQKLSTKNSFESVSREWHAAKADRWTLAYR  120
            L EAR  RD AR   A+GI+P  +RK +  A +L+T NSF +V  +W A +     L  +
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHR----RLELK  116

Query  121  E-------EIIKTFEQDVFPFIGKRPIAEIKPLELLEVLKRIEKRGALEKTRKVRQRCGE  173
            E       +I + F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  +
Sbjct  117  EGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQ  176

Query  174  VFRYAIITGRAEY-NPAPDLAIALAVPKQ--KHHPFLSAEELPHFVRDLEAYTGSIITKN  230
            +FR+A++ + +   NPA+DL + +A PK    H+PFL  +ELP+++R L  Y G+I T+ 
Sbjct  177  LFRFAMVKAEGLVGNPASDLDV-VAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  ATKIVMLTGVRTQEMRFATWQELDLEKGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++++LTGVRT E+R+AT +++DLE+GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSRQVIR----LFQQLKPITGHYPYIFIGRNNRKKPISKESINQVIELLGFKGRITGHGF  332
            LS Q I     L++Q+KP   H   ++  R + KK IS +++N  +  +G+ G +TGHG+
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGI  352

Query  333  RHTMSTILHEAGFNSAWIEMQLAHVDKNSIRGVYNHAQYLNGRSRMLQFYADKL  386
            R T+ST L+E G+   W++ QL+H D N + + YNHA Y++ R +M+Q  AD+L
Sbjct  353  RGTLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

40) int in NC_011745


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  233 bits (867),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 259/414 (63%), Gaps = 22/414 (5%)

Query  14   MLLSDLAIRRAKPKEKAYTLNDGNGLSLLIEPNGSKGWRLRYRFAGKPKMLSLGVYPEVS  73
            M L+D+A+R+A+P  K YTL D +GLSL + ++G+K+W++RY  A+K K +SLG YP VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  74   LSDARTARDEAKRLIAGGVNPSEVRKAQKREQANKCGNTFEVIAREWYEKR---LDRWSP  130
            L +AR+ RDEA+ L A G+NP   RK + R       N+F  +  +W   R   L     
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  131  SYAEEMIETFEKDVFPYIGGRPIAEIKPMELLAVLSRLNDRGATEKLRKVRQRCGEVFRY  190
            S   ++   F+KDV+P +G   I +I+  +LL VL+ +++RGA     KVR +  ++FR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  191  AIITGRAEY-NPAPDLASAFAPHKK-EHYAYLKVDELPEFFRVFNTYTGSQIVKLGMRLL  248
            A++ + +   NPA+DL    AP     H ++L+++ELPE++R +  Y G+   +LG+RLL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  249  ILTGLRPGELRQAEWQEIDFDNRLWEVPKE---------RMKMRRPH-----CVPLSEQA  294
            +LTG+R GELR A  +++D++  LW +P E         R + +RP+      VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  295  IAILE-QLKHMTGQYPFIFPGRIQHSKPMSEMAMNVLIRRIGYAGRVTGHGFRHTMSTIL  353
            I I+   L ++      +++ R +  K +SE ++N  +RR+GY G +TGHG+R T+ST L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  354  HEQGYNSAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQ-WYADYMDSLEQGG  406
            +E GY   W+++QL+H D N + +TYNHA Y++ RR M+Q W AD +D LEQG+
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW-ADRLDLLEQGD  413

41) ECSE_0264 in NC_011415


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  229 bits (855),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 165/405 (41%), Positives = 255/405 (63%), Gaps = 27/405 (6%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L    V  A+P  K Y L+D  GL L V + G++ W+ +Y   +K+KRM++G YPAVS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQL--NNTFQSVALEWHGTKVSRWSEG  118
            L +ARALRDEA+   A GI+P   +K+   +R V+L  +N+F++V L+W + +     EG
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHK--LRAVRLATENSFKAVYLQWLAHRRLELKEG  118

Query  119  YASDIIE---AFNKDIFPYIGQLPVNEIKPLVLLNVLRRIESRGATEKAKKVRQRCSEVF  175
              S + +    F+KD++P +G + + +I+   LL+VL  IE RGA   A KVR +  ++F
Sbjct  119  RQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIVTGRAEY-NPAADLTSAMSGHES-KHYPFLTVVELPDFFKALSGYTGSPLVVLAAR  233
            R+A+V + +   NPA+DL    +   +  H PFL + ELP++++ L  Y G+    L+ R
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLILTGVRTGELRGACWSEFDFEKAVWEIPAE---------RMKMKRPH-----LVPLST  279
            LL+LTGVRTGELR A   +FD+E+++W IP+E         R + KRP+     +VPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QALEIAQQL--KVMSGQYPLVFPGRNDPRKTMSEASINQVFKRIGYTGKVTGHGFRHTMS  337
            QA+EI + L  +V ++Q  L ++ R D +K +SE ++N  ++R+GY G +TGHG+R T+S
Sbjct  299  QAIEIVRYLLEQVKPAQRHL-LAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLS  357

Query  338  TILHEEGFNTAWIETQLAHVDKNAIRGTYNHAQYLDGRLEMMQ-W  381
            T L+E G+   W+++QL+H D N + +TYNHA Y++ R  MMQ W
Sbjct  358  TGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

42) ENC_02820 in NC_021046


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 166/411 (41%), Positives = 264/411 (65%), Gaps = 31/411 (7%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSMLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P +K YTL D +GLS+ +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRDTARKQVANGIDPVEERKALKLAQKLSTENSFESVSREWHST-----KADRW  115
            L EAR  RD AR   A+GI+P  +RK    A +L+TENSF +V  +W +      K +R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  116  TVAYREEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVF  175
            +     +I + F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  ++F
Sbjct  121  STL--SQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIITGRAEY-NPAPDLAIALAVHKQ-KHHPFLSSEELPHFIRDLEAYTGSIITKNATK  233
            R+A++ + +   NPA+DL +  A      H+PFL  +ELP+++R L  Y G+I T+ + +
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  IIMLTGVRTQEMRFATWDEVDLDKGVWQIPAE---------RMKMRRPH-----LVPLST  279
            +++LTGVRT E+R+AT D+ DL++G+W IP+E         R + +RP+     +VPLS 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QVID----LFKQLKPITGHYPYIFIGRNNRSKPISKETVSQVIELLGYKGRATGHGFRHT  335
            Q I+    L+ Q+KP   H   ++  R +  K IS +T++  +  +GY G  TGHG+R T
Sbjct  299  QAIEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGFESAWIEMQLAHADKNKIRGIYNHAQYLEERKKMLQ-WYSNL  385
            +ST L+E G+   W++ QL+HAD NK+ + YNHA Y+E R+KM+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

43) EcolC_0053 in NC_010468


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  228 bits (850),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 167/408 (41%), Positives = 262/408 (65%), Gaps = 33/408 (8%)

Query  1    MALTDTQIKRAKPQDKPYTLNDGQGLSLLINPDGTKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD  +++A+P +K YTL D +GLSL +++ G K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKALRLAQKLSTENSFEAICREWHTN-----KADRW  115
            L EAR  RD AR   A+GI+P  +RK    A +L+TENSF A+  +W ++     K +R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  116  TVAYREEIMKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVY  175
              +   +I + F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  +++
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIITGRAEY-NPAPDLAIALAVPKQ--KHHPFLSAEELPHFIQDLEAYTGSIITKNAT  232
            R+A++ + +   NPA+DL + +A PK    H+PFL  +ELP++++ L  Y G+I T+ + 
Sbjct  179  RFAMVKAEGLVGNPASDLDV-VAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGI  237

Query  233  KIVMLTGVRTQEMRLATWNEVDLEKGIWEIPAE---------RMKMRRPH-----IVPLS  278
            ++++LTGVRT E+RLAT ++ DLE+G+W IP+E         R + +RP+     IVPLS
Sbjct  238  RLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLS  297

Query  279  TQVIA----LFEQLKPITGHYPYIFIGRNNRSKPISKESVSQVIELLGYKGRATGHGFRH  334
             Q I     L+EQ+KP   H   ++  R +  K IS ++++  +  +GY G  TGHG+R 
Sbjct  298  VQAIEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRG  354

Query  335  SLSTILHEHGFDSAWIEMQLAHVDKNSIRGTYNHAQYLEKRLHMMQ-W  381
            +LST L+E G+   W++ QL+H D N + +TYNHA Y+E R  MMQ W
Sbjct  355  TLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

44) ETAC_11945 in NC_020796


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  228 bits (850),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 162/402 (41%), Positives = 255/402 (64%), Gaps = 21/402 (5%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTAGSKGWRYRYRFAGKPKMISFGVYGDVS  60
            M L+D+ +++A+P +K YTL D  GLSL + + G+K+W++RY  A+K K +S+G Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAQARAKRDEARSMLAKGINPSEARKAEKIALQFAHENSFESVAREWHGSKKATWSEG--  118
            L +ARA RDEAR++ AKGINP   RK    A+++A ENSF +V  +W + ++    EG  
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  119  -YAKEVLNCMEKDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRY  177
                ++    +KD++P +G   I +I   +LL VL  IE+RGA+  + K+R +  +++R+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  AVATGRAKY-NFAPDLA-IALNKPKTQHFPFLTESELPAFISALENYKGSLVTKYATQLL  235
            A+  + +   N A+DL  +A  KP   H PFL   ELP ++  L  Y+G++ T+ + +LL
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  MLTGVRTIELRAAEWVEFDLENAIWEIPKE---------RMKKRRPH-----LVPLSTQA  281
            +LTGVRT ELR A   +FDLE ++W IP E         R + +RP+     +VPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  LSILR-QLQVITGNYSLVFPGRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTIL  340
            + I+R  L+ +      +++ R D++K +SE ++N  ++ +GY+G LTGHG+R T+ST L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  341  HEHGFESTWIEMQLAHVDKNSIRGTYNHAQYILSRKKMMQ-W  381
            +E G+   W++ QL+H D N + +TYNHA Y+ +R+KMMQ W
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

45) YE105_C3845 in NC_015224


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  228 bits (848),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 256/407 (63%), Gaps = 31/407 (7%)

Query  1    MPLSDIQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLIS  60
            M+L+D+ +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  +S
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDMARKQVADGTDPAEVKKADKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLENGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGRNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++  R D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRRDMLQ-W  381
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

46) YPC_4545 in NC_017265


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  221 bits (823),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 256/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITQLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I + +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

47) YpAngola_A4153 in NC_010159


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (819),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 170/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSEKSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++E+SF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

48) SARI_03887 in NC_010067


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (819),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 167/408 (41%), Positives = 266/408 (66%), Gaps = 33/408 (8%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+ +++A+P +K YTL D +GLSL +++ G+K+W+FR+  A+K + MS+G+Y  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LaearekrdaarkQVANGIDPVEERKALKLAQKLSTENSFESVSREWHST-----KADRW  115
            L EAR  RD AR   A+GI+P  +RK    A +L+TENSF +V  +W +      K +R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  116  TVAYREEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVF  175
            +     +I + F++DV+P +G   I +I+  +LL+VL  IE+RGA+  + KVR +  ++F
Sbjct  121  STL--SQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  176  RYAIITGRAEY-NPAPDLAIALAVPKQ--KHHPFLSAEELPHFIRDLEAYTGSIITKNAT  232
            R+A++ + +   NPA+DL + +A PK    H+PFL  +ELP+++R L  Y G+I T+ + 
Sbjct  179  RFAMVKAEGLVGNPASDLDV-VAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGI  237

Query  233  KIVMLTGVRTQEMRFATWDEVNLEKGIWEIPAE---------RMKMRRPH-----IVPLS  278
            ++++LTGVRT E+R+AT D+ +LE+G+W IP+E         R + +RP+     IVPLS
Sbjct  238  RLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLS  297

Query  279  TQVID----LFKQLKPITGHYPYIFIGRNNRSKPISKESVSQVIELLGYKGRATGHGFRH  334
             Q I+    L+ Q+KP   H   ++  R +  K IS ++++  +  +GY G  TGHG+R 
Sbjct  298  VQAIEIVRYLLEQVKPAQRH---LLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRG  354

Query  335  TMSTILHEQGFDSAWIEIQLAHTDKNAIRGTYNHAIYLENRRIMLQ-W  381
            T+ST L+E G+   W++ QL+H+D N + +TYNHA+Y+E RR M+Q W
Sbjct  355  TLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

49) A1122_05665 in NC_017168


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

50) YPA_4123 in NC_008150


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

51) xerC4 in NC_005810


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

52) YPO4033 in NC_003143


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

53) YPD4_3547 in NC_017154


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

54) YPD8_3553 in NC_017160


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

55) y4052 in NC_004088


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

56) YPN_3680 in NC_008149


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

57) YPDSF_3775 in NC_009381


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 255/411 (63%), Gaps = 31/411 (7%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D  +R+A+P  K YTL+D +GLSL + ++G+K+W+FRY  A+K + MSLGTY  VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKL-AQRLSSENSFEAISREWHKAKADRWSLGY  119
            L EAR+ RD AR   A G +P  V + +KL A RL++ENSF A+  +W      ++ L  
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLEL  115

Query  120  RE-------EIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCG  172
            +E       +I   F+ D++P +G   I +I   +LLDVL  IE+RGA+  + KVR +  
Sbjct  116  KEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFR  175

Query  173  EVFRYAIITGRAEY-NPAPDL-ASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKN  230
            ++FR+A++ + +   NPA+DL   A + P   H PFL  +E+P ++R L  Y G+I T+ 
Sbjct  176  QLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQL  235

Query  231  AAKILMLTGVRTKEMRFATWQEIDLEGGLWEIPAE---------RMKMRRPH-----IVP  276
            + ++L+LTGVRT E+R+AT +++DLE GLW IP+E         R + +RP+     IVP
Sbjct  236  GIRLLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVP  295

Query  277  LSTQVIALFKQLL-PITGHYPYIFIGLNDRKKPISKETVNQVIELLGYKGRATGHGFRHT  335
            LS Q I + + LL  +      ++    D KK IS +T+N  +  +GY G  TGHG+R T
Sbjct  296  LSVQAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGT  355

Query  336  MSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQYLEKRREMLQ-WYADL  385
            +ST L+E GY   W++ QL+H D N + +TYNHA Y+E RR M+Q W   L
Sbjct  356  LSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRL  406

58) SU5_02989 in NC_017623


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  220 bits (820),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 244/382 (64%), Gaps = 20/382 (5%)

Query  2    GLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEA  61
            GLSL + + G+K+W+FRY  A+K K +S+G Y  VSL +ARA RDEAR++ AKGINP   
Sbjct  25   GLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVSLREARALRDEARALAAKGINPKVD  84

Query  62   RKANKIALQFAHENSFESVAREWHSSKKTTWSEG---YAKEVLNCMERDIFPFIGQRPIE  118
            RK +  A+++A ENSF +V  +W + ++    EG      ++    ++D++P +G   I 
Sbjct  85   RKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQSTLSQIQRIFDKDVLPPLGTVTIF  144

Query  119  QIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGRAKY-NFAPDLAI-ALNKP  176
            +I   +LL VL  IE+RGA+  + K+R +  +++R+A+  + +   N A+DL + A  KP
Sbjct  145  DIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRFAMVKAEGLVGNPASDLDVVAAPKP  204

Query  177  KTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNAL  236
               H PFL   ELPE++  L  Y+G++ T+ + +LL+LTGVRT ELR A   +FDL+ +L
Sbjct  205  PVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLLLLTGVRTGELRLATPDQFDLERGL  264

Query  237  WEIPKE---------RMKKRRPH-----LVPLSTQAISILK-KLQEITGNYSLVFPGRND  281
            W IP E         R + +RP+     +VPLS QAI I++  L+++      +++ R D
Sbjct  265  WIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQAIEIVRYLLEQVKPAQRHLLAHRGD  324

Query  282  VRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKNSIRG  341
            ++K +SE ++N  ++ +GY+G LTGHG+R T+ST L+E+G+   W++ QL+H D N + +
Sbjct  325  LKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGLNEIGYPKIWVDAQLSHADPNKVSA  384

Query  342  TYNHAQYLENRRKMMQIYSDML  363
            TYNHA Y+E RRKMMQ  +D L
Sbjct  385  TYNHALYVEPRRKMMQDWADRL  406

59) PputW619_4347 in NC_010501


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  219 bits (814),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 174/413 (43%), Positives = 267/413 (65%), Gaps = 24/413 (5%)

Query  1    MALTDTAIRTARPRDKLYRIADAQGLCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPSVT  60
            MALTD A+R ARP +K Y ++D +GL L V++ GGK W++RY   +K K ++LGTYP+V+
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAHARERRDAARKLLSQGIDPSAYkqqekaaaeaqaltletla-REWY-----DYNQPRW  114
            L +AR  RD AR L ++GI+P   +++   A    +         +W      + ++ R 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR-  119

Query  115  APATASKALQYLESDIFPLIGKRPAAEVQRPELVDLVRKIEQREAFNVARKVRQWLSQIF  174
              +T S+  + ++ D++P +G     +++R++L+D++  IEQR AF  A KVR W+ Q+F
Sbjct  120  -QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLF  178

Query  175  RFGLAKG-VVAGNPATDLDvvaahaprtrhhphvSeaelpellekleaaQCDFTSKIAIR  233
            RF++ K+  + GNPA+DLDVVAA  P   H+P +   ELPELL KL   + ++T++++IR
Sbjct  179  RFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIR  238

Query  234  LLLLTAVRPGELRLAPWDEFDLESATWTIPAA---------RMKARRPH-----IVPLPR  279
            LLLLT+VR GELRLA  D+FDLE + W IP+          R +++RP+     IVPL+ 
Sbjct  239  LLLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSV  298

Query  280  QAVNLLR-ALHELTGTYPLAFPGRNDRSRPMSENTVNKALSTMGYEGRQTGHGFRHLLST  338
            QA++++R  L+++  +    ++ R D  + +SENT+N AL  MGYEG  TGHG+R  LST
Sbjct  299  QAIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLST  358

Query  339  SLNTRGYNRDWIERQLAHGDQDSIRDTYNHAHYLEQRREMMQTWADHVDALAE  391
            +LN  GY + W++ QL+H+D + +  TYNHA Y+E RR MMQ WAD++D L +
Sbjct  359  GLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQ  411

60) GEM_3075 in NC_018513


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  216 bits (805),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 165/412 (41%), Positives = 257/412 (63%), Gaps = 19/412 (4%)

Query  1    MSLTDTAVRNLKPSDKPYKLADGGGMYLHVTPNGGKYWRLAFRLHGKQKIYALGVYPQVS  60
            M+LTD AVR+ +P++K Y L+D +G+ L V+++GGK W++ +   +KQK  +LG YP VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARQMRDEAKKLIKQGIDPVIERKQTVRRRSEEQATTFELIAREWHKTKRSAWTESHA  120
            L EAR +RDEA+ L  +GI+P ++RK+ +R        +F  +  +W   +R    E++ 
Sbjct  61   LREARALRDEARALAAKGINPKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQ  120

Query  121  K---KIMNSLEADIFPRLGDRPIGSISAPDLLMALRVIEKRGALEIAGRVLQRCNAVFRY  177
                +I   ++ D++P LG   I  I  ++LL  L  IE+RGA+  A +V  +   +FR+
Sbjct  121  STLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRF  180

Query  178  A-VATGRIVANPAAELRG-ALKTPERKHHAALAHDELPEFLAKLAGYDGDPQTRLGLQLM  235
            A V +  +V+NPA++L   A   P   H++ L  +ELPE+L KL  Y G+  T+LG++L+
Sbjct  181  AMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL  240

Query  236  VHTFVRTGELRAASWAEFNLELSEWRIPAERMKMREE--------------HIVPLSKQA  281
            + T VRTGELR A+  +F+LE + W IP+E +K  ++               IVPLS QA
Sbjct  241  LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQA  300

Query  282  VALLRQLQAVGAGSDLVFPSGNGRRNKWISENTLLYALYRLGYHSRATGHGFRATASTIL  341
            + ++R L      ++  + +  G  +K+ISENTL  AL R+GY++  TGHG+R+T ST L
Sbjct  301  IEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGL  360

Query  342  NEMGFHPDWIERQLAHAERNKVRAAYNRALYLAERRQMMQVWSDYLDIAASG  393
            NE+G+   W++ QL+HA+ NKV A+YN+ALY+  RR+MMQ W+D LD+   G
Sbjct  361  NEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDWADRLDLLEQG  412

61) Y11_30661 in NC_017564


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  207 bits (768),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 156/388 (41%), Positives = 240/388 (62%), Gaps = 31/388 (7%)

Query  6    MTDGGGLYLEVSASGAKYWRMKYRYGGKEKRIAFGVYPHVSLADARQKRETAKKLLASGT  65
            + D +GL L VSA G+K W+ +Y  ++K+KR+++G YP VSL +AR  R+ A+ L A G 
Sbjct  20   LPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVSLREARALRDEARALAAKGI  79

Query  66   DPAEVKKADKL-AQRLSSENSFEAISREWHKAKADRWSLGYRE-------EIMSTFEADI  117
            +P  V + +KL A RL++ENSF A+  +W      ++ L  +E       +I   F+ D+
Sbjct  80   NP-KVDRKHKLRAVRLATENSFKAVYLQW----LAHRRLELKEGRQSTLSQIQRIFDKDV  134

Query  118  FPYIGKRPIAEITPLELLDVLQRIEKRGALEKTHKVRQRCGEVFRYAIITGRAEY-NPAP  176
            +P +G   I +I   +LLDVL  IE+RGA+  ++KVR +  ++FR+A++ + +   NPA+
Sbjct  135  LPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFRFAMVKAEGLVGNPAS  194

Query  177  DLAS-ALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGVRTKEMRFAT  235
            DL   A + P   H PFL  +E+P ++R L  Y G+I T+ + ++L+LTGVRT E+R+AT
Sbjct  195  DLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLLLLTGVRTGELRLAT  254

Query  236  WQEIDLESGLWEIPAE---------RMKMRRPH-----IVPLSTHVIALFKQLL-PITGH  280
             +++DLE GLW IP+E         R + +RP+     IVPLS + I + + LL  +   
Sbjct  255  PDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQAIEIVRYLLEQVKPA  314

Query  281  YPYIFIGRNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQL  340
               ++  R D KK IS +T+N  +  +GY G  TGHG+R T+ST L+E GY   W++ QL
Sbjct  315  QRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGLNEIGYPKIWVDAQL  374

Query  341  AHVDKNSIRGTYNHAQYLEKRRDMLQ-W  367
            +H D N + +TYNHA Y+E RR M+Q W
Sbjct  375  SHADPNKVSATYNHALYVEPRRKMMQDW  402

62) EcE24377A_3377 in NC_009801


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  197 bits (730),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 163/403 (41%), Positives = 254/403 (64%), Gaps = 23/403 (5%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDIS  60
            MALT   V  ARP  KDY L+D  GL L V + G++ W+++Y  A+K+K+++LG YP +S
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKL-TQKISATNTFHALATEWHQHKSLSWSESY  119
            L EAR  RD+AR + + G +P    RK+KL + ++++ N+F A+  +W  H+ L   E+ 
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR  119

Query  120  TRSVLE---ALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176
              ++ +    +DKD++P LG  ++ DI   ++L++L  IE+RG++    KVR    Q+FR
Sbjct  120  QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFR  179

Query  177  YAIATGRATV-NPASELTSTLAA-PKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnl  234
            +A+  + + V NPAS+L    A+ P  AH P LR +ELP +LRKL  Y+G+  T+++  L
Sbjct  180  FAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRL  239

Query  235  llltglrtielrSAEWSEIDFDNALWTIPESRMK-----MRRKH---------VVPLSRQ  280
            LLLTG+RT ELR A   ++D++ +LW IP   +K     MR++          +VPLS Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  281  ATDIL-LQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTI  339
            A +I+   L       R +++ R D++K +SE ++N  L+R+GY+G  TGHG+R T+ST 
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  340  LHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYLDGRREMMQ-W  381
            L+E G+   W++ QL+H D N + +TYNHALY++ RR MMQ W
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

63) EcSMS35_3112 in NC_010498


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  197 bits (731),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 164/403 (41%), Positives = 254/403 (64%), Gaps = 23/403 (5%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALT   V  ARP  KDY L+D  GL L V + G++ W+++Y  A+K+K+++LG YP VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKL-TQKISATNTFHALATEWHQHKSLSWSESY  119
            L EAR  RD+AR + + G +P    RK+KL + ++++ N+F A+  +W  H+ L   E+ 
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR  119

Query  120  ARSVLE---ALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176
              ++ +    +DKD++P LG  ++ DI   ++L++L  IE+RG++    KVR    Q+FR
Sbjct  120  QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFR  179

Query  177  YAIATGRATV-NPASELTSTLAA-PKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnl  234
            +A+  + + V NPAS+L    A+ P  AH P LR +ELP +LRKL  Y+G+  T+++  L
Sbjct  180  FAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRL  239

Query  235  llltglrtielrSAEWSEIDFDNALWTIPESRMK-----MRRKH---------VVPLSRQ  280
            LLLTG+RT ELR A   ++D++ +LW IP   +K     MR++          +VPLS Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  281  ATDIL-LQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTI  339
            A +I+   L       R +++ R D++K +SE ++N  L+R+GY+G  TGHG+R T+ST 
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  340  LHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYLDGRREMMQ-W  381
            L+E G+   W++ QL+H D N + +TYNHALY++ RR MMQ W
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402

64) SeHA_C4738 in NC_011083


> AF440524|5|G1|24461654|AAN62223.1|Pseudomonas_aeruginosa_SG17M|+|16091..17500|int|-|putative 
integrase
Length=469

 Score =  194 bits (721),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 163/403 (41%), Positives = 253/403 (63%), Gaps = 23/403 (5%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALT   V  ARP  KDY L+D  GL L V + G++ W+++Y  A+K+K+++LG YP VS
Sbjct  1    MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVS  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKL-TQKISATNTFHALATEWHQHKSLSWSESY  119
            L EAR  RD+AR + + G +P    RK+KL + ++++ N+F A+  +W  H+ L   E+ 
Sbjct  61   LREARALRDEARALAAKGINP-KVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGR  119

Query  120  ARSVLE---ALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176
              ++ +    +DKD++P LG  ++ DI   ++L++L  IE+RG++    KVR    Q+FR
Sbjct  120  QSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQRGAFTTAEKVRTWFRQLFR  179

Query  177  YAIATGRATV-NPASELTSTLAA-PKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnl  234
            +A+  + + V NPAS+L    A+ P  AH P LR +ELP +LRKL  Y+G+  T+++  L
Sbjct  180  FAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRL  239

Query  235  llltglrtielrSAEWSEIDFDNALWTIPESRMK-----MRRK---------HVVPLSRQ  280
            LLLTG+RT ELR A   ++D++ +LW IP   +K     MR++          +VPLS Q
Sbjct  240  LLLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQ  299

Query  281  ATDIL-LQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTI  339
            A +I+   L       R +++ R D++K +SE ++N  L+R+GY+G  TGHG+R T+ST 
Sbjct  300  AIEIVRYLLEQVKPAQRHLLAHRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTG  359

Query  340  LHEQGFNSAWIEMQLAHVDKNAIRGTYNHAQYLDGRREMMQ-W  381
            L+E G+   W++ QL+H D N + +TYNHA Y++ RR MMQ W
Sbjct  360  LNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQDW  402