Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
IS3 orfB |
NC_004741 (Shigella flexneri 2457T) |
5e-58 |
100 |
|
IS3 ORF2 |
NC_008258 (Shigella flexneri 8401) |
5e-58 |
100 |
|
IS3 orfB |
NC_004741 (Shigella flexneri 2457T) |
3e-40 |
75 |
|
hypothetical protein |
NC_022221 (Salmonella enterica CDC1983-67) |
6e-36 |
74 |
|
hypothetical protein |
NC_016831 (Salmonella enterica RKS5078) |
6e-36 |
74 |
|
IS3 ORF2 |
NC_007385 (Shigella sonnei Ss046) |
2e-33 |
73 |
|
hypothetical protein |
NC_020064 (Serratia marcescens FGI94) |
3e-32 |
82 |
|
Integrase catalytic region |
NC_022268 (Serratia sp. ATCC 39006) |
6e-30 |
70 |
|
hypothetical protein |
NC_022221 (Salmonella enterica CDC1983-67) |
3e-28 |
70 |
|
transposase |
NC_011205 (Salmonella enterica CT_02021853) |
3e-28 |
70 |
|
hypothetical protein |
NC_016831 (Salmonella enterica RKS5078) |
3e-28 |
70 |
|
transposase |
NC_021984 (Salmonella enterica S06004) |
4e-25 |
68 |
|
IS3 ORF2 |
NC_008789 (Halorhodospira halophila SL1) |
7e-20 |
48 |
|
transposase-like protein |
NC_016801 (Corynebacterium diphtheriae C7 (beta)) |
2e-11 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF141323' AND ph.id_pai_orf='5' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc