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Homologs of hrpG gene of AF069651

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpG
( YP_273538.1 )

type III secretion component protein HrpG

NC_005773
(Pseudomonas syringae 1448A)

9e-63

2) Psyr_1199
( YP_234291.1 )

type III secretion protein HrpG

NC_007005
(Pseudomonas syringae B728a)

2e-54

3) hrpG
( NP_791215.1 )

type III secretion protein HrpG

NC_004578
(Pseudomonas syringae DC3000)

1e-43

4) Pmen_0024
( YP_001185531.1 )

hypothetical protein

NC_009439
(Pseudomonas mendocina ymp)

8e-30

• Sequence Alignments

1) hrpG in NC_005773


> AF069651|5|G5|3603319|AAC35805.1|Pseudomonas_syringae_Race_4|+|2263..2703|hrpG|-|HrpG
Length=146

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 145/146 (99%), Positives = 145/146 (99%), Gaps = 0/146 (0%)

Query  1    MSSMDFSEFAEVVGQWCDQRPATALDCWVDDANVRLEVVGHGIRCSIELLDPYDANDSQR  60
            MSSMDFSEFAEVVGQWCDQRPATALDCWVDDANVRLEVVGHGIRCSIELLDPYDANDSQR
Sbjct  1    MSSMDFSEFAEVVGQWCDQRPATALDCWVDDANVRLEVVGHGIRCSIELLDPYDANDSQR  60

Query  61   IEALLSHGGASLACACDGAFAIDPQTRCMVLVTWIPNPCNLADLLARLESLANQRAALLS  120
            IEALLSHGGASLACACDGAFAIDPQTRCMVLVTWIPNPCNLADLLARLE LANQRAALLS
Sbjct  61   IEALLSHGGASLACACDGAFAIDPQTRCMVLVTWIPNPCNLADLLARLERLANQRAALLS  120

Query  121  LMQTTIGDMTPAISGRTTLNHRQPGV  146
            LMQTTIGDMTPAISGRTTLNHRQPGV
Sbjct  121  LMQTTIGDMTPAISGRTTLNHRQPGV  146

2) Psyr_1199 in NC_007005


> AF069651|5|G5|3603319|AAC35805.1|Pseudomonas_syringae_Race_4|+|2263..2703|hrpG|-|HrpG
Length=146

 Score =  204 bits (759),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 122/146 (84%), Positives = 134/146 (92%), Gaps = 0/146 (0%)

Query  1    MSSMDFSEFEEVVGLWRDQRPASPLDCWVDDANARLERVGGGVRCSIELLDPYDANDPQR  60
            MSSMDFSEF EVVG W DQRPA++LDCWVDDAN RLE VG G+RCSIELLDPYDAND+QR
Sbjct  1    MSSMDFSEFAEVVGQWCDQRPATALDCWVDDANVRLEVVGHGIRCSIELLDPYDANDSQR  60

Query  61   IEALLSHGGASLACACDGAFAIDPQTRCMVLVSWMPGPCSLADLLNRLESLANQRAALLS  120
            IEALLSHGGASLACACDGAFAIDPQTRCMVLV+W+P PC+LADLL RLE LANQRAALLS
Sbjct  61   IEALLSHGGASLACACDGAFAIDPQTRCMVLVTWIPNPCNLADLLARLERLANQRAALLS  120

Query  121  LMHTTLVNSVPALAGRTTLNHRQPGV  146
            LM+TT+ +  PA++GRTTLNHRQPGV
Sbjct  121  LMQTTIGDMTPAISGRTTLNHRQPGV  146

3) hrpG in NC_004578


> AF069651|5|G5|3603319|AAC35805.1|Pseudomonas_syringae_Race_4|+|2263..2703|hrpG|-|HrpG
Length=146

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 109/143 (77%), Positives = 132/143 (93%), Gaps = 0/143 (0%)

Query  1    MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSIELLDPYDAGDPQRlea  60
            M+FSEF+E+VGQW  QRPA +LDCW+DDAN RL VVG+G+RCSIELLDPYDA D+QR+EA
Sbjct  4    MDFSEFAEVVGQWCDQRPATALDCWVDDANVRLEVVGHGIRCSIELLDPYDANDSQRIEA  63

Query  61   llgeggaslacacDGALAIDPQTRCVVLVSWMANPCSLGDLLDRLESLANQRAAMLSLMQ  120
            LL++GGASLACACDGA+AIDPQTRC+VLV+W++NPC+L+DLL RLE LANQRAA+LSLMQ
Sbjct  64   LLSHGGASLACACDGAFAIDPQTRCMVLVTWIPNPCNLADLLARLERLANQRAALLSLMQ  123

Query  121  TTIRNTTPTLSGRSILNHRQPGV  143
            TTI + TP++SGR+ LNHRQPGV
Sbjct  124  TTIGDMTPAISGRTTLNHRQPGV  146

4) Pmen_0024 in NC_009439


> AF069651|5|G5|3603319|AAC35805.1|Pseudomonas_syringae_Race_4|+|2263..2703|hrpG|-|HrpG
Length=146

 Score =  123 bits (448),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 80/143 (56%), Positives = 120/143 (84%), Gaps = 2/143 (1%)

Query  1    MEFSEFSDVIAQWCEA-SALPLDCWIDDANARLAEMGGGVRCSLEVLNPFEASDQQRLQA  59
            M+FSEF++V++QWC+  +A +LDCW+DDAN RL  +G G+RCS+E+L+P++A+D QR++A
Sbjct  4    MDFSEFAEVVGQWCDQRPATALDCWVDDANVRLEVVGHGIRCSIELLDPYDANDSQRIEA  63

Query  60   VLSQggaglacacdgafaIDPDTHALVLVNWHRAPCSVDQLLASLERLANQRAALISLLH  119
            +LS+GGA+LACACDGAFAIDP+T+ +VLV W   PC++ +LLA LERLANQRAAL+SL++
Sbjct  64   LLSHGGASLACACDGAFAIDPQTRCMVLVTWIPNPCNLADLLARLERLANQRAALLSLMQ  123

Query  120  VSIRE-AALIAPQPSFNALHPGV  141
             +I + ++ I+ + ++N  +PGV
Sbjct  124  TTIGDMTPAISGRTTLNHRQPGV  146