Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of unnamed gene of AF022236

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECO111_3771
( YP_003236107.1 )

T3SS component

NC_013364
(Escherichia coli 11128)

1e-26

100

2) G2583_4442
( YP_003501893.1 )

type III secretion system protein, YseE family

NC_013941
(Escherichia coli CB9615)

1e-26

100

3) E2348C_3967
( YP_002331429.1 )

component of T3SS

NC_011601
(Escherichia coli E2348/69)

1e-26

100

4) ECH74115_5079
( YP_002273183.1 )

type III secretion system protein, YseE family

NC_011353
(Escherichia coli EC4115)

1e-26

100

5) Z5139
( NP_290287.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

1e-26

100

6) ECO55CA74_21310
( YP_006161367.1 )

type III secretion system protein, YseE family

NC_017656
(Escherichia coli RM12579)

1e-26

100

7) escE
( YP_003080499.1 )

LEE-encoded type III secretion system factor

NC_013008
(Escherichia coli TW14359)

1e-26

100

8) CDCO157_4322
( YP_006315187.1 )

hypothetical protein

NC_017906
(Escherichia coli Xuzhou21)

1e-26

100

9) ECs4587
( NP_312614.1 )

hypothetical protein

NC_002695
(Escherichia coli Sakai)

1e-26

10) ROD_30141
( YP_003366521.1 )

T3SS component

NC_013716
(Citrobacter rodentium ICC168)

2e-22

11) ECO26_5252
( YP_003232134.1 )

T3SS component

NC_013361
(Escherichia coli 11368)

3e-20

12) ECO103_3637
( YP_003223494.1 )

T3SS component

NC_013353
(Escherichia coli 12009)

3e-20

• Sequence Alignments

1) ECO111_3771 in NC_013364


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

2) E2348C_3967 in NC_011601


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

3) ECH74115_5079 in NC_011353


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

4) Z5139 in NC_002655


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

5) escE in NC_013008


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

6) G2583_4442 in NC_013941


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

7) ECO55CA74_21310 in NC_017656


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

8) CDCO157_4322 in NC_017906


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

9) ECs4587 in NC_002695


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score =  112 bits (407),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 71/72 (99%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYDEAKELLIACDAAIR  60
           MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTY+EAKELLIACDAAIR
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  TIEIMRIRINNK  72
           TIEIMRIRINNK
Sbjct  61  TIEIMRIRINNK  72

10) ROD_30141 in NC_013716


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 62/70 (89%), Positives = 66/70 (95%), Gaps = 0/70 (0%)

Query  1   MITITELEDEIIKNKKSANIFIEKINDKKNEIHEKMKKPLDKVTYNEAKELLIACDAAIK  60
           MITITELEDEIIKNK +AN+FIEKINDKKNEIHEKMK PLDKVTYNEAKELLIACDAAI+
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIR  60

Query  61  VIEIMVIRLN  70
            IEIM IR+N
Sbjct  61  TIEIMRIRIN  70

11) ECO103_3637 in NC_013353


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score = 91.5 bits (328),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/58 (99%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MITITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAA  58
           MITITELEDEIIKNKEAAN+FIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAA
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAA  58

12) ECO26_5252 in NC_013361


> AF022236|5|G4|2865272|AAC38365.1|Escherichia_coli_E2348/69|+|4474..4692|-|-|Orf2
Length=72

 Score = 91.5 bits (328),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/58 (99%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MITITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAA  58
           MITITELEDEIIKNKEAAN+FIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAA
Sbjct  1   MITITELEDEIIKNKEAANVFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAA  58