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Homologs of unnamed gene of AB063171

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAPIG0065
( YP_005732875.1 )

copper P-type ATPase AtkB

NC_017333
(Staphylococcus aureus ST398)

1e-18

100

2) PFC_02800
( YP_006491811.1 )

copper-transporting atpase, p-type

NC_018092
(Pyrococcus furiosus COM1)

3e-08

3) PF0731
( NP_578460.1 )

copper-transporting atpase, p-type

NC_003413
(Pyrococcus furiosus DSM 3638)

3e-08

4) DKAM_0515
( YP_002428208.1 )

Cation transporting ATPase (E1-E2 family) protein

NC_011766
(Desulfurococcus kamchatkensis 1221n)

0.005

5) SVI_3090
( YP_003557839.1 )

hypothetical protein

NC_014012
(Shewanella violacea DSS12)

0.031

6) SVI_3091
( YP_003557840.1 )

hypothetical protein

NC_014012
(Shewanella violacea DSS12)

0.031

7) SVI_3092
( YP_003557841.1 )

hypothetical protein

NC_014012
(Shewanella violacea DSS12)

0.031

8) SSU05_1384
( YP_001198750.1 )

cation transport ATPase

NC_009442
(Streptococcus suis 05ZYH33)

0.42

9) Pnap_4529
( YP_973544.1 )

heavy metal translocating P-type ATPase

NC_008758
(Polaromonas naphthalenivorans CJ2)

9.9

• Sequence Alignments

1) SAPIG0065 in NC_017333


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 86.3 bits (308),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 56/56 (100%), Positives = 56/56 (100%), Gaps = 0/56 (0%)

Query  1   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTLKLK  56
           MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTLKLK
Sbjct  4   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTLKLK  59

2) PFC_02800 in NC_018092


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 51.6 bits (176),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 0/50 (0%)

Query  1   MVQNLAWATGYNSFAIPLAAGALYSYGILLSPALGALLMSMSTVIVAINA  50
           MVQNL W++GYN  A+PLAAG L   G++LSPA+GA+LMS+STVIVAINA
Sbjct  4   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINA  53

3) PF0731 in NC_003413


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 51.6 bits (176),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 0/50 (0%)

Query  1   MVQNLAWATGYNSFAIPLAAGALYSYGILLSPALGALLMSMSTVIVAINA  50
           MVQNL W++GYN  A+PLAAG L   G++LSPA+GA+LMS+STVIVAINA
Sbjct  4   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINA  53

4) DKAM_0515 in NC_011766


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 34.0 bits (109),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 24/56 (43%), Positives = 37/56 (67%), Gaps = 0/56 (0%)

Query  9   KRKTIENLLWSFIYNILLIPVVAGILYGYGVYRGPEYAAIPMILSGISVASNSITV  64
            RK ++NL W+  YNI+ +P+ AGIL   G+  +P  +AI M LS + VA N++T+
Sbjct  1   MRKMVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTL  56

5) SVI_3090 in NC_014012


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 31.4 bits (99),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 19/45 (43%), Positives = 34/45 (76%), Gaps = 1/45 (2%)

Query  5   YNSLGIPVAAGVLFPLTGILLSPVIAGAAMALSSLTVVTNANRLR  49
           YN +++P+AAG+L ++ G++LSP I++  M+LS++ V  NA  L+
Sbjct  14  YNIVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  57

6) SVI_3091 in NC_014012


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 31.4 bits (99),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 19/45 (43%), Positives = 34/45 (76%), Gaps = 1/45 (2%)

Query  5   YNSLGIPVAAGVLFPLTGILLSPVIAGAAMALSSLTVVTNANRLR  49
           YN +++P+AAG+L ++ G++LSP I++  M+LS++ V  NA  L+
Sbjct  14  YNIVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  57

7) SVI_3092 in NC_014012


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 31.4 bits (99),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 19/45 (43%), Positives = 34/45 (76%), Gaps = 1/45 (2%)

Query  5   YNSLGIPVAAGVLFPLTGILLSPVIAGAAMALSSLTVVTNANRLR  49
           YN +++P+AAG+L ++ G++LSP I++  M+LS++ V  NA  L+
Sbjct  14  YNIVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  57

8) SSU05_1384 in NC_009442


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 27.7 bits (85),  Expect = 0.42, Method: Compositional matrix adjust.
 Identities = 18/43 (42%), Positives = 33/43 (77%), Gaps = 1/43 (2%)

Query  1   MIGIPIAMGLLHAFGGPLLNPMFAGAAMALSSVSVVLNALRLK  43
           ++++P+A G+L AF G +L+P +++  M+LS+V V +NA+ LK
Sbjct  16  IVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  57

9) Pnap_4529 in NC_008758


> AB063171|5|G3|18148884|BAB83474.1|Staphylococcus_hominis_GIFU12263|-|1537..1716|-|-|-
Length=59

 Score = 23.0 bits (67),  Expect = 9.9, Method: Compositional matrix adjust.
 Identities = 19/42 (46%), Positives = 30/42 (72%), Gaps = 1/42 (2%)

Query  3   MAFPLAAGQFYTFTGWQLSPMIGGLAMSFSSAFVIFIALPLR  44
           +A PLAAG + +F G  LSP IG++ MS+S+ +V + A+ L+
Sbjct  17  VAVPLAAG-ILAFIGLILSPAIGAILMSLSTVIVAINAFTLK  57