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Homologs of APECO1_1093 gene of NC_008563_P3

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) P12B_c2100
( - )

NC_017663
(Escherichia coli P12b)

0.0

99.5

2) unnamed
( - )

NC_017626
(Escherichia coli 042)

0.0

3) E2348C_1108
( - )

NC_011601
(Escherichia coli E2348/69)

0.0

4) EC55989_2251
( - )

NC_011748
(Escherichia coli 55989)

0.0

98.7

5) ECO103_2471
( - )

NC_013353
(Escherichia coli 12009)

0.0

99.7

• Sequence Alignments

1) P12B_c2100 in NC_017663


>NC_008563_P3|49|G45|117624200|YP_853113.1|Escherichia_coli_APEC_O1|+|66189..67100|-|APECO1_1093|hypothetical 
          Length = 912

 Score = 1698 bits (4381), Expect = 0.0
 Identities = 868/873 (99%)
 Strand = Plus / Plus

Query: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 99

Query: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgcctggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgcctggc 159

Query: 121 attatgggtaaaagcgggccc-gtaaatcctcactctgtaatgcgctgtttcagggggag 179
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 160 attatgggtaaaagcggggccggtaaatcctcactctgtaatgcgctgtttcagggggag 219

Query: 180 gtcaccccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgaat 239
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atcaccccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgaat 279

Query: 240 ggccatggtcacagcatggttatcactgacctgcccggggtgggcgagagccgggacagg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggccatggtcacagcatggttatcactgacctgcccggggtgggcgagagccgggacagg 339

Query: 300 gatgcagagtatgaagccctgtaccgtgacattctgctcgaactggacctggtactgtgg 359
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 340 gatgcagagtatgaagccctgtaccgtgacattctgcccgaactggacctggtactgtgg 399

Query: 360 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatcctg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatcctg 459

Query: 420 caccggggacatcagcgggtactgtttgtggtgatgcaggccgataaaacggagccctgc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 caccggggacatcagcgggtactgtttgtggtgatgcaggccgataaaacggagccctgc 519

Query: 480 catgaatgggatatggccggtattcagccttctcccgcagaggcacagaacattcgcgaa 539
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 520 catgaatgggatatggccggtattcagccttctcccgcacaggcacagaacattcgcgaa 579

Query: 540 aaaacggaggcggtattccgtctgttccggcccgtacatcgggttgttgccgtatcggcc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aaaacggaggcggtattccgtctgttccggcccgtacatcgggttgttgccgtatcggcc 639

Query: 600 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcacttcccgaccat 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcacttcccgaccat 699

Query: 660 gccgccagtcccctgatgacccgcctgcaggacgagctgcgcacggagtctgtccggtct 719
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gccgccagtcccctgatgacccgcctgcaggacgagctgcgcacggagtctgtccggtct 759

Query: 720 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacggcggagagcgtc 779
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacggcggagagcgtc 819

Query: 780 tgcattgcctctgttgcacgcacggttctgcgcgccgtccgtgactcggtggtctctgtt 839
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tgcattgcctctgttgcacgcacggttctgcgcgccgtccgtgactcggtggtctctgtt 879

Query: 840 gcccgcgcggtatggaactggattttcttctga 872
           |||||||||||||||||||||||||||||||||
Sbjct: 880 gcccgcgcggtatggaactggattttcttctga 912

2) unnamed in NC_017626


>NC_008563_P3|49|G45|117624200|YP_853113.1|Escherichia_coli_APEC_O1|+|66189..67100|-|APECO1_1093|hypothetical 
          Length = 912

 Score = 1676 bits (4324), Expect = 0.0
 Identities = 870/906 (96%)
 Strand = Plus / Plus

Query: 1   ggggttttgtcttttttcaccgggaatacatgtatgaatccgtctgatgccattgaggca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   ggggttttgtcttttttcaccgggaatacatgtatgaatccgtctgatgccattgaggca 66

Query: 61  attgaaaaaccgctctcctccctgccttactcgctttcccgtcacatcctggaacatctg 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 67  attgaaaaaccgctctcctccctgccttactcactttcccgtcacatcctggaacatctg 126

Query: 121 cgcaaactcacccgtcacgaacccgtgattggcattatgggtaaaagcggggccggtaaa 180
           |||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 127 cgcaaactcaccagtcacgaacccgtgcctggcattatgggtaaaagcggggccggtaaa 186

Query: 181 tcctcactctgtaatgcactgtttcagggggaggtcaccccggtcagtgatgttcacgcc 240
           ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 187 tcctcactctgtaatgcgctgtttcagggggagatcaccccggtcagtgatgttcacgcc 246

Query: 241 ggcacccgggaagtacggcgcttccgtctgagtggccacggtcacagcatggttatcact 300
           |||||||||||||| | |||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 247 ggcacccgggaagtgcagcgcttccgtctgaatggccatggtcacagcatggttatcact 306

Query: 301 gacctgcccggggtgggcgagagccgggacagggatgcagagtatgaggccctgtaccgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 307 gacctgcccggggtgggcgagagccgggacagggatgcagagtatgaagccctgtaccgt 366

Query: 361 gacattctgcctgaacttgacctggtactgtggctgattaaagccgatgaccgtgccctg 420
           ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gacattctgcccgaactggacctggtactgtggctgattaaagccgatgaccgtgccctg 426

Query: 421 tctgtggatgagtatttctggcgacacatcctgcaccggggacatcagcgggtactgttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tctgtggatgagtatttctggcgacacatcctgcaccggggacatcagcgggtactgttt 486

Query: 481 gtggtgacgcaggccgacaaaacggagccctgccatgaatgggatatggccggtattcag 540
           ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtggtgatgcaggccgataaaacggagccctgccatgaatgggatatggccggtattcag 546

Query: 541 ccttctcctgcacaggcacagaatattcgcgaaaaaacggaggcggtattccgtctgttc 600
           |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccttctcccgcacaggcacagaacattcgcgaaaaaacggaggcggtattccgtctgttc 606

Query: 601 cggcccgtacatccggttgtggccgtatcggcccgcaccggctgggaactggatacgctg 660
           ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cggcccgtacatcgggttgttgccgtatcggcccgcaccggctgggaactggatacgctg 666

Query: 661 gtcagtgcgctcatgacagcgcttcccgaccatgccgccagtcccctgatgacccgactg 720
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 667 gtcagtgcgctcatgacagcacttcccgaccatgccgccagtcccctgatgacccgcctg 726

Query: 721 caggacgagctgcgcacggaatctgtccgcgctcaggcccgtgaacagtttaccggtgcg 780
           |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||
Sbjct: 727 caggacgagctgcgcacggagtctgtccggtctcaggcccgtgaacagtttaccggtgcg 786

Query: 781 gtggaccggatatttgacacagcggagagcgtctgtgttgcctctgttgtccgtacggcc 840
           |||||||||||||||||||| ||||||||||||||  ||||||||||||  || ||||  
Sbjct: 787 gtggaccggatatttgacacggcggagagcgtctgcattgcctctgttgcacgcacggtt 846

Query: 841 ctgcgcgctgttcgtgacacggtggtctctgttgcccgtgcggtatggaactggattttc 900
           |||||||| || |||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 847 ctgcgcgccgtccgtgactcggtggtctctgttgcccgcgcggtatggaactggattttc 906

Query: 901 ttctga 906
           ||||||
Sbjct: 907 ttctga 912

3) E2348C_1108 in NC_011601


>NC_008563_P3|49|G45|117624200|YP_853113.1|Escherichia_coli_APEC_O1|+|66189..67100|-|APECO1_1093|hypothetical 
          Length = 912

 Score = 1602 bits (4133), Expect = 0.0
 Identities = 837/873 (96%)
 Strand = Plus / Plus

Query: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 99

Query: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagccacgaacccgtgattggc 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||
Sbjct: 100 ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgcctggc 159

Query: 121 attatggg-aaaagcggggccggtaaatcctcactctgtaatgcgctgtttcagggagag 179
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 160 attatgggtaaaagcggggccggtaaatcctcactctgtaatgcgctgtttcagggggag 219

Query: 180 gtcaccccggtcagtgatgttcacgccggcacccgggaagtgcggcgcttccgtctgagt 239
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 220 atcaccccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgaat 279

Query: 240 ggtcacggtcaccgcatggttatcactgacctgtccggggtgggcgagagccgggacagg 299
           || || |||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 280 ggccatggtcacagcatggttatcactgacctgcccggggtgggcgagagccgggacagg 339

Query: 300 gatgcagagtatgaagccctgtaccgtgacattctgcctgaacttgacctggtactgtgg 359
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 340 gatgcagagtatgaagccctgtaccgtgacattctgcccgaactggacctggtactgtgg 399

Query: 360 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatactg 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 400 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatcctg 459

Query: 420 caccggggacatcagcaggtgctgtttgtggtgacgcaggccgacaaaacagagccctgc 479
           |||||||||||||||| ||| ||||||||||||| ||||||||| ||||| |||||||||
Sbjct: 460 caccggggacatcagcgggtactgtttgtggtgatgcaggccgataaaacggagccctgc 519

Query: 480 catgaatgggatatggcaggtattcagccttctcccgcacaggcacagaatattcgcgaa 539
           ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 520 catgaatgggatatggccggtattcagccttctcccgcacaggcacagaacattcgcgaa 579

Query: 540 aaaacggaggcggtattccgtctgttccggcccgtacatccggttgttgccgtatcggcc 599
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 580 aaaacggaggcggtattccgtctgttccggcccgtacatcgggttgttgccgtatcggcc 639

Query: 600 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcgcttcccgaccat 659
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 640 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcacttcccgaccat 699

Query: 660 gccgtcagtcccctgatgacccgcctgcaggacgagctgcgcacggaatctgtccggggt 719
           |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  |
Sbjct: 700 gccgccagtcccctgatgacccgcctgcaggacgagctgcgcacggagtctgtccggtct 759

Query: 720 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacggcggagagcgtc 779
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacggcggagagcgtc 819

Query: 780 tgtgttgcctctgttgcccgtacggttctgcgtgccgtccgtgacacggtggtctctgtt 839
           ||  ||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 820 tgcattgcctctgttgcacgcacggttctgcgcgccgtccgtgactcggtggtctctgtt 879

Query: 840 gcccgcgctgtatggaactggattttctcctga 872
           |||||||| ||||||||||||||||||| ||||
Sbjct: 880 gcccgcgcggtatggaactggattttcttctga 912

4) EC55989_2251 in NC_011748


>NC_008563_P3|49|G45|117624200|YP_853113.1|Escherichia_coli_APEC_O1|+|66189..67100|-|APECO1_1093|hypothetical 
          Length = 912

 Score = 1306 bits (3371), Expect = 0.0
 Identities = 672/682 (99%)
 Strand = Plus / Plus

Query: 1   gtgcgcggggttttgtcttttttcaccgggaatacatgtatgaatccgtctgatgccatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtgcgcggggttttgtcttttttcaccgggaatacatgtatgaatccgtctgatgccatt 60

Query: 61  gaggcaattgaaaaaccgctctcctccctgccttactcactttcccgtcacatcctggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaggcaattgaaaaaccgctctcctccctgccttactcactttcccgtcacatcctggaa 120

Query: 121 catctgcgcaaactcaccagtcacgaacccgtgattggcattatgggtaaaagcggggcc 180
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 121 catctgcgcaaactcaccagtcacgaacccgtgcctggcattatgggtaaaagcggggcc 180

Query: 181 ggtaaatcctcactctgtaatgcactgtttcagggggaggtcaccccggtcagtgatgtt 240
           ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 181 ggtaaatcctcactctgtaatgcgctgtttcagggggagatcaccccggtcagtgatgtt 240

Query: 241 cacgccggcccccgggaagtgcggcgcttccgtctgagtggccacggtcacagcatggtt 300
           ||||||||| |||||||||||| |||||||||||||| |||||| |||||||||||||||
Sbjct: 241 cacgccggcacccgggaagtgcagcgcttccgtctgaatggccatggtcacagcatggtt 300

Query: 301 atcactgacctgcccggggtgggcgagagccgggacagggatgcagagtatgaagccctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcactgacctgcccggggtgggcgagagccgggacagggatgcagagtatgaagccctg 360

Query: 361 taccgtgacattctgcccgaactggacctggtgctgtggctgattaaagccgatgaccgt 420
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 taccgtgacattctgcccgaactggacctggtactgtggctgattaaagccgatgaccgt 420

Query: 421 gccctgtctgtggatgagtatttctggcgacacatcctgcaccggggacatcagcgggta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccctgtctgtggatgagtatttctggcgacacatcctgcaccggggacatcagcgggta 480

Query: 481 ctgtttgtggtgatgcaggccgataaaacggagccctgccatgaatgggatatggccggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgtttgtggtgatgcaggccgataaaacggagccctgccatgaatgggatatggccggt 540

Query: 541 attcagccttctcccgcacaggcacagaacattcgcgaaaaaacggag-cggtattccgt 599
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 541 attcagccttctcccgcacaggcacagaacattcgcgaaaaaacggaggcggtattccgt 600

Query: 600 ctgttccggcccgtacatcgggttgttgccgtatcggcccgcaccggctgggaactggat 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgttccggcccgtacatcgggttgttgccgtatcggcccgcaccggctgggaactggat 660

Query: 660 acgctggtcagtgcgctcatga 681
           ||||||||||||||||||||||
Sbjct: 661 acgctggtcagtgcgctcatga 682

5) ECO103_2471 in NC_013353


>NC_008563_P3|49|G45|117624200|YP_853113.1|Escherichia_coli_APEC_O1|+|66189..67100|-|APECO1_1093|hypothetical 
          Length = 912

 Score = 1285 bits (3316), Expect = 0.0
 Identities = 652/654 (100%)
 Strand = Plus / Plus

Query: 1   gtgcagcgcttccgtctgaatggccatggtcacagcatggttatcactgacctgcccggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtgcagcgcttccgtctgaatggccatggtcacagcatggttatcactgacctgcccggg 318

Query: 61  gtgggcgagagccgggacagggatgcagagtatgaagccctgtaccgtgacattctgctc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 319 gtgggcgagagccgggacagggatgcagagtatgaagccctgtaccgtgacattctgccc 378

Query: 121 gaactggacctggtactgtggctgattaaagccgatgaccgtgccctgtctgtggatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaactggacctggtactgtggctgattaaagccgatgaccgtgccctgtctgtggatgag 438

Query: 181 tatttctggcgacacatcctgcaccggggacatcagcgggtactgtttgtggtgatgcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatttctggcgacacatcctgcaccggggacatcagcgggtactgtttgtggtgatgcag 498

Query: 241 gccgataaaacggagccctgccatgaatgggatatggccggtattcagccttctcccgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gccgataaaacggagccctgccatgaatgggatatggccggtattcagccttctcccgca 558

Query: 301 gaggcacagaacattcgcgaaaaaacggaggcggtattccgtctgttccggcccgtacat 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 caggcacagaacattcgcgaaaaaacggaggcggtattccgtctgttccggcccgtacat 618

Query: 361 cgggttgttgccgtatcggcccgcaccggctgggaactggatacgctggtcagtgcgctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cgggttgttgccgtatcggcccgcaccggctgggaactggatacgctggtcagtgcgctc 678

Query: 421 atgacagcacttcccgaccatgccgccagtcccctgatgacccgcctgcaggacgagctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atgacagcacttcccgaccatgccgccagtcccctgatgacccgcctgcaggacgagctg 738

Query: 481 cgcacggagtctgtccggtctcaggcccgtgaacagtttaccggtgcggtggaccggata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cgcacggagtctgtccggtctcaggcccgtgaacagtttaccggtgcggtggaccggata 798

Query: 541 tttgacacggcggagagcgtctgcattgcctctgttgcacgcacggttctgcgcgccgtc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tttgacacggcggagagcgtctgcattgcctctgttgcacgcacggttctgcgcgccgtc 858

Query: 601 cgtgactcggtggtctctgttgcccgcgcggtatggaactggattttcttctga 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 cgtgactcggtggtctctgttgcccgcgcggtatggaactggattttcttctga 912