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PAthogenisity Island DataBase (PAI DB)

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Homologs of HH0281 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0281
( NP_859812.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

3e-72

100

2) HCBAA847_1666
( YP_007601527.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

1e-32

• Sequence Alignments

1) HH0281 in NC_004917


> NC_004917_P1|49|G49|32265780|NP_859812.1|Helicobacter_hepaticus_ATCC_51449|-|54055..54540|-|HH0281|hypothetical 
protein
Length=161

 Score =  264 bits (986),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MQDSVTKAVIEDLNRYYGKDFITFDKKGMTLHYRGSLKEFFQQEHPTDITKKQLIENEID  60
            MQDSVTKAVIEDLNRYYGKDFITFDKKGMTLHYRGSLKEFFQQEHPTDITKKQLIENEID
Sbjct  1    MQDSVTKAVIEDLNRYYGKDFITFDKKGMTLHYRGSLKEFFQQEHPTDITKKQLIENEID  60

Query  61   FEMRFGDFRDDVLGGSGSMEYCGDNDKLYPNHFGLTNAPLFSFGGFLYEQDELPIKYVFM  120
            FEMRFGDFRDDVLGGSGSMEYCGDNDKLYPNHFGLTNAPLFSFGGFLYEQDELPIKYVFM
Sbjct  61   FEMRFGDFRDDVLGGSGSMEYCGDNDKLYPNHFGLTNAPLFSFGGFLYEQDELPIKYVFM  120

Query  121  YLDQYQLKDWVVELRKEGKVTFETFIDNSKIHESRLKEYNQ  161
            YLDQYQLKDWVVELRKEGKVTFETFIDNSKIHESRLKEYNQ
Sbjct  121  YLDQYQLKDWVVELRKEGKVTFETFIDNSKIHESRLKEYNQ  161

2) HCBAA847_1666 in NC_020555


> NC_004917_P1|49|G49|32265780|NP_859812.1|Helicobacter_hepaticus_ATCC_51449|-|54055..54540|-|HH0281|hypothetical 
protein
Length=161

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 72/158 (46%), Positives = 112/158 (71%), Gaps = 12/158 (7%)

Query  2    DKLNMDILKELNSSYGREWLTFSEKGLALHYKGALKGFIEENN---------IVSKVDFD  52
            D +   ++ +LN  YG++ +TF  KG++LHY+G+LK F+++++         I + +DF+
Sbjct  3    DSVTKAVIEDLNRYYGKDFITFDKKGMTLHYRGSLKEFFQQEHPTDITKKQLIENEIDFE  62

Query  53   KRFGDFRDEVLIKNGLDELLYCGDNDMLHPYNFGLTNAPVFGIGGVL-GVEDMPVKYAFL  111
             RFGDFRD+VL   G + + YCGDND L P +FGLTNAP+F++GG L   +++P+KY F+
Sbjct  63   MRFGDFRDDVL--GGSGSMEYCGDNDKLYPNHFGLTNAPLFSFGGFLYEQDELPIKYVFM  120

Query  112  FFNRYQVVDWLEELVKSGEVTFETFVDNTKAYEASLAE  149
            ++++YQ+ DW+ EL K G VTFETF+DN+K  E+ L E
Sbjct  121  YLDQYQLKDWVVELRKEGKVTFETFIDNSKIHESRLKE  158