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Homologs of afaC gene of GQ497943

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) aafC
( YP_006099162.1 )

aggregative adherence fimbria II usher protein

NC_017627
(Escherichia coli 042)

0.0

2) O3M_26187
( YP_006772795.1 )

Outer membrane usher protein Agg3C

NC_018654
(Escherichia coli 2009EL-2050)

0.0

3) O3O_26297
( YP_006786921.1 )

Outer membrane usher protein Agg3C

NC_018662
(Escherichia coli 2009EL-2071)

0.0

4) O3K_26207
( YP_006792567.1 )

Outer membrane usher protein Agg3C

NC_018666
(Escherichia coli 2011C-3493)

0.0

5) safC
( NP_454907.1 )

outer-membrane fimbrial usher protein

NC_003198
(Salmonella enterica CT18)

0.0

6) STBHUCCB_27130
( YP_005218227.1 )

Outer-membrane fimbrial usher protein

NC_016832
(Salmonella enterica P-stx-12)

0.0

7) safC
( NP_806279.1 )

outer-membrane fimbrial usher protein

NC_004631
(Salmonella enterica Ty2)

0.0

8) TY21A_12985
( YP_007926852.1 )

outer-membrane fimbrial usher protein

NC_021176
(Salmonella enterica Ty21a)

0.0

9) SBOV02431
( YP_008504137.1 )

outer-membrane fimbrial usher protein

NC_022241
(Salmonella enterica 3114)

0.0

10) CFSAN002050_08105
( YP_008259556.1 )

pilin outer membrane usher protein SafC

NC_021818
(Salmonella enterica CFSAN002050)

0.0

11) SPAB_03304
( YP_001589497.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

0.0

12) SeAg_B0331
( YP_002145281.1 )

outer-membrane fimbrial usher protein

NC_011149
(Salmonella enterica SL483)

0.0

13) SSPA2300
( YP_002143146.1 )

outer-membrane fimbrial usher protein

NC_011147
(Salmonella enterica AKU12601)

0.0

14) safC
( YP_151652.1 )

outer-membrane fimbrial usher protein

NC_006511
(Salmonella enterica ATCC 9150)

0.0

15) safC
( YP_215281.1 )

fimbriae usher

NC_006905
(Salmonella enterica SC-B67)

0.0

16) safC
( YP_008482256.1 )

salmonella atypical fimbria outer membrane usher

NC_022221
(Salmonella enterica CDC1983-67)

0.0

17) safC
( YP_005213799.1 )

atypical fimbria outer membrane usher

NC_016831
(Salmonella enterica RKS5078)

0.0

18) I137_12500
( YP_008381919.1 )

pilin outer membrane usher protein SafC

NC_021984
(Salmonella enterica S06004)

0.0

19) SNSL254_A0338
( YP_002039542.1 )

outer-membrane fimbrial usher protein

NC_011080
(Salmonella enterica SL254)

0.0

20) SN31241_12980
( YP_008359215.1 )

Outer-membrane fimbrial usher protein

NC_021902
(Salmonella enterica USMARC-S3124.1)

0.0

21) SeSA_A0338
( YP_002113317.1 )

outer-membrane fimbrial usher protein

NC_011094
(Salmonella enterica CVM19633)

0.0

22) SEEB0189_17835
( YP_008309858.1 )

pilin outer membrane usher protein SafC

NC_021844
(Salmonella enterica CFSAN000189)

0.0

23) SeD_A0330
( YP_002214256.1 )

outer-membrane fimbrial usher protein

NC_011205
(Salmonella enterica CT_02021853)

0.0

24) SE451236_07535
( YP_008264556.1 )

pilin outer membrane usher protein SafC

NC_021820
(Salmonella enterica 08-1736)

0.0

25) safC
( YP_005235973.1 )

putative fimbrial usher

NC_016856
(Salmonella enterica 14028S)

0.0

26) CFSAN001921_15885
( YP_008256523.1 )

pilin outer membrane usher protein SafC

NC_021814
(Salmonella enterica CFSAN001921)

0.0

27) STMMW_03111
( YP_005231378.1 )

atypical fimbria outer membrane usher

NC_016854
(Salmonella enterica D23580)

0.0

28) safC
( NP_459299.1 )

fimbrial usher

NC_003197
(Salmonella enterica LT2)

0.0

29) safC
( YP_005180226.1 )

atypical fimbria outer membrane usher

NC_016810
(Salmonella enterica SL1344)

0.0

30) safC
( YP_005241247.1 )

putative fimbrial usher

NC_016857
(Salmonella enterica ST4/74)

0.0

31) STMDT12_C03000
( YP_005245996.1 )

putative fimbrial usher protein

NC_016860
(Salmonella enterica T000240)

0.0

32) STU288_13220
( YP_007903737.1 )

pilin outer membrane usher protein SafC

NC_021151
(Salmonella enterica U288)

0.0

33) safC
( YP_005250867.1 )

putative fimbrial usher

NC_016863
(Salmonella enterica UK-1)

0.0

34) safC
( YP_005395804.1 )

atypical fimbria outer membrane usher

NC_017046
(Salmonella enterica 798)

0.0

35) D781_3832
( YP_007346211.1 )

P pilus assembly protein, porin PapC

NC_020064
(Serratia marcescens FGI94)

0.0

36) safC
( YP_002242437.1 )

atypical fimbria outer membrane usher

NC_011294
(Salmonella enterica P125109)

2e-179

37) SN31241_6420
( YP_008358560.1 )

Fimbrial usher protein

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-174

38) YPK_2757
( YP_001721487.1 )

fimbrial biogenesis outer membrane usher protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-165

39) YE105_C2661
( YP_004298860.1 )

outer membrane usher protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

6e-164

40) Y11_03331
( YP_006003832.1 )

outer membrane usher protein psaC

NC_017564
(Yersinia enterocolitica Y11)

1e-163

41) ECSE_P2-0002
( YP_002291151.1 )

putative fimbrial usher protein

NC_011413
(Escherichia coli SE11)

3e-163

42) caf1A
( NP_995524.1 )

putative F1 capsule anchoring protein

NC_005815
(Yersinia pestis 91001)

2e-162

43) A1122_21617
( YP_005523918.1 )

putative F1 capsule anchoring protein

NC_017169
(Yersinia pestis A1122)

2e-162

44) YPA_MT0069
( YP_636756.1 )

F1 capsule anchoring protein

NC_008120
(Yersinia pestis Antiqua)

2e-162

45) caf1A
( NP_395429.1 )

putative F1 capsule anchoring protein

NC_003134
(Yersinia pestis CO92)

2e-162

46) caf1A
( YP_005507054.1 )

putative F1 capsule anchoring protein

NC_017158
(Yersinia pestis D182038)

2e-162

47) caf1A
( YP_005626400.1 )

putative F1 capsule anchoring protein

NC_017266
(Yersinia pestis Harbin 35)

2e-162

48) Y1099
( NP_857880.1 )

F1 capsule

NC_004838
(Yersinia pestis KIM)

2e-162

49) YPN_MT0065
( YP_636640.1 )

F1 capsule anchoring protein

NC_008118
(Yersinia pestis Nepal516)

2e-162

50) YPDSF_4097
( YP_001154729.1 )

F1 capsule anchoring protein

NC_009378
(Yersinia pestis Pestoides F)

2e-162

51) psaC
( NP_992653.1 )

outer membrane usher protein PsaC

NC_005810
(Yersinia pestis 91001)

4e-162

52) psaC
( YP_002346330.1 )

outer membrane usher protein PsaC

NC_003143
(Yersinia pestis CO92)

4e-162

53) psaC
( YP_005624703.1 )

outer membrane usher protein PsaC

NC_017265
(Yersinia pestis Harbin 35)

4e-162

54) psaC
( NP_670180.1 )

outer membrane usher protein PsaC precursor

NC_004088
(Yersinia pestis KIM)

4e-162

55) A1122_20415
( YP_005523714.1 )

outer membrane usher protein PsaC

NC_017168
(Yersinia pestis A1122)

5e-162

56) YpAngola_A1531
( YP_001606040.1 )

outer membrane usher protein PsaC

NC_010159
(Yersinia pestis Angola)

5e-162

57) YPA_1022
( YP_650934.1 )

outer membrane usher protein PsaC

NC_008150
(Yersinia pestis Antiqua)

5e-162

58) YPD4_1154
( YP_005504365.1 )

outer membrane usher protein PsaC

NC_017154
(Yersinia pestis D106004)

5e-162

59) YPN_2674
( YP_648602.1 )

outer membrane usher protein PsaC

NC_008149
(Yersinia pestis Nepal516)

5e-162

60) YPDSF_2392
( YP_001163740.1 )

outer membrane usher protein PsaC

NC_009381
(Yersinia pestis Pestoides F)

5e-162

61) YPZ3_1193
( YP_003567365.1 )

outer membrane usher protein PsaC

NC_014029
(Yersinia pestis Z176003)

5e-162

62) YpsIP31758_2676
( YP_001401641.1 )

fimbrial usher protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

5e-162

63) psaC
( YP_069868.1 )

outer membrane usher protein PsaC

NC_006155
(Yersinia pseudotuberculosis IP 32953)

5e-162

64) YPTS_1431
( YP_001871860.1 )

fimbrial biogenesis outer membrane usher protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

5e-162

65) caf1A
( YP_005506899.1 )

putative F1 capsule anchoring protein

NC_017155
(Yersinia pestis D106004)

2e-159

66) caf1A
( YP_003565787.1 )

putative F1 capsule anchoring protein

NC_014022
(Yersinia pestis Z176003)

2e-159

67) PSPPH_A0064
( YP_272180.1 )

outer-membrane fimbrial usher protein

NC_007274
(Pseudomonas syringae 1448A)

6e-154

68) Spro_2874
( YP_001479103.1 )

fimbrial biogenesis outer membrane usher protein

NC_009832
(Serratia proteamaculans 568)

3e-153

69) myfC
( YP_001005762.1 )

outer membrane usher protein

NC_008800
(Yersinia enterocolitica 8081)

2e-152

70) Spro_1053
( YP_001477285.1 )

fimbrial biogenesis outer membrane usher protein

NC_009832
(Serratia proteamaculans 568)

4e-150

71) ECENHK_08570
( YP_006578215.1 )

outer membrane usher protein SfmD

NC_018405
(Enterobacter cloacae ENHKU01)

2e-143

72) A225_4163
( YP_006499855.1 )

type 1 fimbriae anchoring protein FimD

NC_018106
(Klebsiella oxytoca E718)

2e-141

73) KOX_26315
( YP_005021211.1 )

outer membrane usher protein SfmD

NC_016612
(Klebsiella oxytoca KCTC 1686)

2e-141

74) CFSAN001992_05635
( YP_007470885.1 )

outer membrane usher protein SfmD

NC_020307
(Salmonella enterica CFSAN001992)

4e-141

75) SeSA_A1271
( YP_002114200.1 )

outer membrane usher protein SfmD

NC_011094
(Salmonella enterica CVM19633)

4e-141

76) psaC
( YP_005508071.1 )

outer membrane usher protein PsaC

NC_017160
(Yersinia pestis D182038)

1e-129

77) CSSP291_12035
( YP_007441279.1 )

hypothetical protein

NC_020260
(Cronobacter sakazakii Sp291)

2e-127

• Sequence Alignments

1) aafC in NC_017627


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  956 bits (3622),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 602/840 (72%), Positives = 726/840 (87%), Gaps = 7/840 (0%)

Query  2    TCTLLHVEDVIARTYSFNSSLLSGGGKGVDLTLFEEGGQLPGIYQTDIILNGSRVDSLEM  61
            +CTLL   +  ARTYSF++S+L GGGKGVDLTLFEEG+QLPGIY  DIILNGSRVDS +M
Sbjct  29   ACTLLYTGNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDM  88

Query  62   PFHTEKDENGRPYLKTCLTQEMLARYGVKTEEYPALFRSLGGGSDTSGERGVCADLSAIP  121
            +F+TEKD +G+ YLKTCLT+EMLARYGV TEEYP LF++     D + E   CA+LS IP
Sbjct  89   AFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHG-----DDGKEAEACAELSVIP  143

Query  122  QATENYQFAAQQLVLGIPQVALRPLLRGIAPEVLWDDGIPAFLLNWQANAGRSEYRGYIK  181
            QATE YQFA+QQL+L+IPQVALRP LRGIAPE LWDDGIPAFLLNWQAN++RSEYRGY K
Sbjct  144  QATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGK  203

Query  182  DVEDYFWSSLEPGINIGSWRIRNLTTWNKSSGQSGKWESLYIRAERGLNSLKSRLTLGEN  241
             V D +W +LEPGIN+G+WR+RNLTTWN+SSGQ+G+WES YIRAERG+NSL+SRLTLGE+
Sbjct  204  SVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGED  263

Query  242  YTPSDIFDSVPFRGGMLSSDESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIQSQTVA  301
            YTPSDIFDSVPFRG ML++DESMVPYNQREFAPVVRGIARTQARIEVRQNGYLI+S+TVA
Sbjct  264  YTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVA  323

Query  302  PGAFALTDLPVTGSGSDLQVTVRESDGtvqvftvpfttpAIALREGYLKYNVMAGQYRSS  361
            PGAFALTDLP+TGSG+DLQVTV+ESDGT QVFTVP+TTPAIALREGY+KY++ +G+YRSS
Sbjct  324  PGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSS  383

Query  362  DDAVEDSTLGQVMGMYGLPWGLTVFGGLQGAEHYQSAALGLGWSLGKLGAVSLDTIHSRG  421
            DDAVE+S LGQ+  MYGLPWGLT FGG Q + HYQSAALGLGWS+G+LGAVS+D IHSRG
Sbjct  384  DDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRG  443

Query  422  QQKGYNYETGNTWRIRYNKSFELTGTSFTAASYQYSSSGYHTLSDVLETYRDDGRFAYrs  481
            QQKG + ETG+TWR+RYNKSFELT T +TAA YQY+SSG+HTLSDVL T+R+D   AY  
Sbjct  444  QQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSY  503

Query  482  tdsrtsrttVNLSQSLGRWGYLGLNGSRDEYR-DRPHQDYIGASYGASWNRMSLSVNWSR  540
            ++ R+ RTT+ L+QSLG  GY+++ GSRDE+R +R  QD +G SYG+SW+ +S  VNWSR
Sbjct  504  SGDRSRRTTLRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSR  563

Query  541  NHSTRGYYGSKSRTEDSISIWMSIPLESWLGRSDNNISATAQMQRSTEQNTRYELGLNGR  600
            N ST +YY  +++ EDSI++WM+IPL  W+G  DN+I+ T+Q QR+T QNT+YE GLNGR
Sbjct  564  NYSTNAYY-QRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFDRRLFWEVHEQMVSGSEYNTGTSRLNLRWSGTYGELAGMYSYSSNMRQINAGMSGSMV  660
            AFDRRL+W+V E++ +GSE N ++SRLNLRW GTYGELAGMYSYSS +RQ++AG+SG+MV
Sbjct  623  AFDRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMV  682

Query  661  AHGEGVTFGQRAGDTVTLIAAPGVSGASVGDWPGVRTDFRGYALAGYASPYQENVITLDP  720
             H EG+T+GQ++ DTV+L+ APGV+GASVG  PGVRTD RGY+L    SPYQEN+ITLDP
Sbjct  683  LHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDP  742

Query  721  TTFPEDAEVPQTDSRVVPTKGAVVRAGFRTRVGGRALVSLTRQDGSSLPFGAIVTLEGKP  780
            TTFPE+ EV+QTD+RVVPTKGAVVRA F TRVGGRAL++L+R DGS LPFGA+VT EGK 
Sbjct  743  TTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKK  802

Query  781  GETSGSAGVVDDKGRVYLSGLSETGKLKAQWGENSLCHADYRLPEEKGPAGIFLTRTVCM  840
            G+ +G+AGVV+D+G VYLSGL ETG+LK QWG NS C+A+YRLPEEK ++GIFL RTVCM
Sbjct  803  GQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVCM  862

2) O3M_26187 in NC_018654


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  839 bits (3177),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 509/799 (64%), Positives = 660/799 (83%), Gaps = 9/799 (1%)

Query  1    MPGIYPVDIILNGSRIDSRDIFFYTKKNRHGEYYLKPCLTRDILINYGVKIEEYPNLFRQ  60
            +PGIYPVDIILNGSR+DSRD+ F T K+ +G  YLK CLTR++L  YGV  EEYP+LF  
Sbjct  68   LPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELF--  125

Query  61   NSEKNRDSSDCADLSVIPQATEDYHFIKQQLILGIPQVAIHPPLTGIAHETMWDDGISAF  120
            +++  +++  CA+LSVIPQATE Y+F  QQL+L+IPQVA++PPL GIA E++WDDGI+AF
Sbjct  126  HGDDGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAF  185

Query  121  LLNWQVEGGHWEYRSNTRNSSDNFWASLEPGINLGSWRIRNLTTWNKSSGQSGKWESSYI  180
            LLNWQ + ++ EYR+  ++ +DN+W +LEPGINLG+WR+RNLTTWN+SSGQ+G+WES+YI
Sbjct  186  LLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYI  245

Query  181  RVERGLNNIKSRLTFGDDYTPSDIFDSVPFRGGMLGSDENMVPYNQREFAPVVRGIARTQ  240
            R ERG+N+++SRLT+G+DYTPSDIFDSVPFRG MLG+DE+MVPYNQREFAPVVRGIARTQ
Sbjct  246  RAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQ  305

Query  241  ARIEVRQNGYLIQSRIVSPGAFALTDLPVTGNGGDLQVWVLESDGTIQTFNVPFTTPAIA  300
            ARIEVRQNGYLI+SR V+PGAFALTDLP+TG+GGDLQV V ESDGT Q F VP+TTPAIA
Sbjct  306  ARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIA  365

Query  301  LREGYLKYNVTVGEYRPSDDSIEGAYLGQLTAMYGLPWSLTAFGGIQVSEHYQGNAlglg  360
            LREGY+KY+++ GEYR+SDD++E + LGQ++ MYGLPW+LTAFGG Q+S HYQ+ ALGLG
Sbjct  366  LREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLG  425

Query  361  lslggfgsislDTIYSRGQQKGYSNEIGKTWRVRYDKSFELTGTSFAAG-YQDSSAGYHS  419
             S+G +G++S+D I SRGQQKG   E G TWR+RY+KSFELT T ++A+ YQ +S+G+H+
Sbjct  426  WSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHT  485

Query  420  LADVLDTYRNGTAYRSYD---NRIRRTTINISQALGEWGSVALNGGRDEYR-DKVKQDYI  475
            L+DVL T+RN+  +R+Y    +R RRTT+ ++Q+LG  G +++ G+RDE+R ++ KQD +
Sbjct  486  LSDVLSTFRNDN-FRAYSYSGDRSRRTTLRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSF  544

Query  476  GASYSNSWKGITFAVNWSRNNNIGDYYSNSLRTENNLNLWMSIPMKRWLGGDDKGVTATA  535
            G SY+ SWK I+  VNWSRN +   YY  + + E+++NLWM+IP+ +W+GG D+++  T+
Sbjct  545  GMSYGTSWKNISWYVNWSRNYSTNAYYQRG-HIEDSINLWMNIPLGQWIGGRDNDINVTT  603

Query  536  QIQRITGQNTLYETGLNGRAFGQKLYWDIREQIVPGSKYDADTSLLNLRWSGGYGELTGM  595
            Q QR TGQNT YETGLNGRAF+++LYWD+ E+I PGS  + D+S LNLRW G YGEL+GM
Sbjct  604  QTQRTTGQNTWYETGLNGRAFDRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGM  663

Query  596  YSYNRNTRQMNVGTSGSMAIHSGGIAFGQKTDDTMALIAAPGIAGASVGGWPGVSTDFRG  655
            YSY+   RQM+ G SG+M +H+ GI++GQK +DT+AL+ APG+ GASVG+ PGV TD RG
Sbjct  664  YSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRG  723

Query  656  YTLVGHVSPYQENIITLDPTTFPDNTEVSQTDRRVIPTKGALVQAEFKTRVGNRALVTLT  715
            YTLV HVSPYQEN+ITLDPTTFP+N EVSQTD RV+PTKGA+V+A F TRVG RAL+TL+
Sbjct  724  YTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLS  783

Query  716  RKDGTLLPFGTVVTLERKTGEAFESAGVVDDKGKVYLSGLSEAGKLKAQWGTNSQCYADY  775
            R DG+ LPFG+VVT E K G+   +AGVV+D+G VYLSGL E+G+LK QWG NS C A+Y
Sbjct  784  RSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANY  843

Query  776  KLPLKKGMSGIFLTRAVCM  794
            +LP  K  +GIFL R+VCM
Sbjct  844  RLPEEKEATGIFLVRTVCM  862

3) O3O_26297 in NC_018662


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  839 bits (3177),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 509/799 (64%), Positives = 660/799 (83%), Gaps = 9/799 (1%)

Query  1    MPGIYPVDIILNGSRIDSRDIFFYTKKNRHGEYYLKPCLTRDILINYGVKIEEYPNLFRQ  60
            +PGIYPVDIILNGSR+DSRD+ F T K+ +G  YLK CLTR++L  YGV  EEYP+LF  
Sbjct  68   LPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELF--  125

Query  61   NSEKNRDSSDCADLSVIPQATEDYHFIKQQLILGIPQVAIHPPLTGIAHETMWDDGISAF  120
            +++  +++  CA+LSVIPQATE Y+F  QQL+L+IPQVA++PPL GIA E++WDDGI+AF
Sbjct  126  HGDDGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAF  185

Query  121  LLNWQVEGGHWEYRSNTRNSSDNFWASLEPGINLGSWRIRNLTTWNKSSGQSGKWESSYI  180
            LLNWQ + ++ EYR+  ++ +DN+W +LEPGINLG+WR+RNLTTWN+SSGQ+G+WES+YI
Sbjct  186  LLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYI  245

Query  181  RVERGLNNIKSRLTFGDDYTPSDIFDSVPFRGGMLGSDENMVPYNQREFAPVVRGIARTQ  240
            R ERG+N+++SRLT+G+DYTPSDIFDSVPFRG MLG+DE+MVPYNQREFAPVVRGIARTQ
Sbjct  246  RAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQ  305

Query  241  ARIEVRQNGYLIQSRIVSPGAFALTDLPVTGNGGDLQVWVLESDGTIQTFNVPFTTPAIA  300
            ARIEVRQNGYLI+SR V+PGAFALTDLP+TG+GGDLQV V ESDGT Q F VP+TTPAIA
Sbjct  306  ARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIA  365

Query  301  LREGYLKYNVTVGEYRPSDDSIEGAYLGQLTAMYGLPWSLTAFGGIQVSEHYQGNAlglg  360
            LREGY+KY+++ GEYR+SDD++E + LGQ++ MYGLPW+LTAFGG Q+S HYQ+ ALGLG
Sbjct  366  LREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLG  425

Query  361  lslggfgsislDTIYSRGQQKGYSNEIGKTWRVRYDKSFELTGTSFAAG-YQDSSAGYHS  419
             S+G +G++S+D I SRGQQKG   E G TWR+RY+KSFELT T ++A+ YQ +S+G+H+
Sbjct  426  WSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHT  485

Query  420  LADVLDTYRNGTAYRSYD---NRIRRTTINISQALGEWGSVALNGGRDEYR-DKVKQDYI  475
            L+DVL T+RN+  +R+Y    +R RRTT+ ++Q+LG  G +++ G+RDE+R ++ KQD +
Sbjct  486  LSDVLSTFRNDN-FRAYSYSGDRSRRTTLRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSF  544

Query  476  GASYSNSWKGITFAVNWSRNNNIGDYYSNSLRTENNLNLWMSIPMKRWLGGDDKGVTATA  535
            G SY+ SWK I+  VNWSRN +   YY  + + E+++NLWM+IP+ +W+GG D+++  T+
Sbjct  545  GMSYGTSWKNISWYVNWSRNYSTNAYYQRG-HIEDSINLWMNIPLGQWIGGRDNDINVTT  603

Query  536  QIQRITGQNTLYETGLNGRAFGQKLYWDIREQIVPGSKYDADTSLLNLRWSGGYGELTGM  595
            Q QR TGQNT YETGLNGRAF+++LYWD+ E+I PGS  + D+S LNLRW G YGEL+GM
Sbjct  604  QTQRTTGQNTWYETGLNGRAFDRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGM  663

Query  596  YSYNRNTRQMNVGTSGSMAIHSGGIAFGQKTDDTMALIAAPGIAGASVGGWPGVSTDFRG  655
            YSY+   RQM+ G SG+M +H+ GI++GQK +DT+AL+ APG+ GASVG+ PGV TD RG
Sbjct  664  YSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRG  723

Query  656  YTLVGHVSPYQENIITLDPTTFPDNTEVSQTDRRVIPTKGALVQAEFKTRVGNRALVTLT  715
            YTLV HVSPYQEN+ITLDPTTFP+N EVSQTD RV+PTKGA+V+A F TRVG RAL+TL+
Sbjct  724  YTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLS  783

Query  716  RKDGTLLPFGTVVTLERKTGEAFESAGVVDDKGKVYLSGLSEAGKLKAQWGTNSQCYADY  775
            R DG+ LPFG+VVT E K G+   +AGVV+D+G VYLSGL E+G+LK QWG NS C A+Y
Sbjct  784  RSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANY  843

Query  776  KLPLKKGMSGIFLTRAVCM  794
            +LP  K  +GIFL R+VCM
Sbjct  844  RLPEEKEATGIFLVRTVCM  862

4) O3K_26207 in NC_018666


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  839 bits (3177),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 509/799 (64%), Positives = 660/799 (83%), Gaps = 9/799 (1%)

Query  1    MPGIYPVDIILNGSRIDSRDIFFYTKKNRHGEYYLKPCLTRDILINYGVKIEEYPNLFRQ  60
            +PGIYPVDIILNGSR+DSRD+ F T K+ +G  YLK CLTR++L  YGV  EEYP+LF  
Sbjct  68   LPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELF--  125

Query  61   NSEKNRDSSDCADLSVIPQATEDYHFIKQQLILGIPQVAIHPPLTGIAHETMWDDGISAF  120
            +++  +++  CA+LSVIPQATE Y+F  QQL+L+IPQVA++PPL GIA E++WDDGI+AF
Sbjct  126  HGDDGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAF  185

Query  121  LLNWQVEGGHWEYRSNTRNSSDNFWASLEPGINLGSWRIRNLTTWNKSSGQSGKWESSYI  180
            LLNWQ + ++ EYR+  ++ +DN+W +LEPGINLG+WR+RNLTTWN+SSGQ+G+WES+YI
Sbjct  186  LLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYI  245

Query  181  RVERGLNNIKSRLTFGDDYTPSDIFDSVPFRGGMLGSDENMVPYNQREFAPVVRGIARTQ  240
            R ERG+N+++SRLT+G+DYTPSDIFDSVPFRG MLG+DE+MVPYNQREFAPVVRGIARTQ
Sbjct  246  RAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQ  305

Query  241  ARIEVRQNGYLIQSRIVSPGAFALTDLPVTGNGGDLQVWVLESDGTIQTFNVPFTTPAIA  300
            ARIEVRQNGYLI+SR V+PGAFALTDLP+TG+GGDLQV V ESDGT Q F VP+TTPAIA
Sbjct  306  ARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIA  365

Query  301  LREGYLKYNVTVGEYRPSDDSIEGAYLGQLTAMYGLPWSLTAFGGIQVSEHYQGNAlglg  360
            LREGY+KY+++ GEYR+SDD++E + LGQ++ MYGLPW+LTAFGG Q+S HYQ+ ALGLG
Sbjct  366  LREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLG  425

Query  361  lslggfgsislDTIYSRGQQKGYSNEIGKTWRVRYDKSFELTGTSFAAG-YQDSSAGYHS  419
             S+G +G++S+D I SRGQQKG   E G TWR+RY+KSFELT T ++A+ YQ +S+G+H+
Sbjct  426  WSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHT  485

Query  420  LADVLDTYRNGTAYRSYD---NRIRRTTINISQALGEWGSVALNGGRDEYR-DKVKQDYI  475
            L+DVL T+RN+  +R+Y    +R RRTT+ ++Q+LG  G +++ G+RDE+R ++ KQD +
Sbjct  486  LSDVLSTFRNDN-FRAYSYSGDRSRRTTLRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSF  544

Query  476  GASYSNSWKGITFAVNWSRNNNIGDYYSNSLRTENNLNLWMSIPMKRWLGGDDKGVTATA  535
            G SY+ SWK I+  VNWSRN +   YY  + + E+++NLWM+IP+ +W+GG D+++  T+
Sbjct  545  GMSYGTSWKNISWYVNWSRNYSTNAYYQRG-HIEDSINLWMNIPLGQWIGGRDNDINVTT  603

Query  536  QIQRITGQNTLYETGLNGRAFGQKLYWDIREQIVPGSKYDADTSLLNLRWSGGYGELTGM  595
            Q QR TGQNT YETGLNGRAF+++LYWD+ E+I PGS  + D+S LNLRW G YGEL+GM
Sbjct  604  QTQRTTGQNTWYETGLNGRAFDRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGM  663

Query  596  YSYNRNTRQMNVGTSGSMAIHSGGIAFGQKTDDTMALIAAPGIAGASVGGWPGVSTDFRG  655
            YSY+   RQM+ G SG+M +H+ GI++GQK +DT+AL+ APG+ GASVG+ PGV TD RG
Sbjct  664  YSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRG  723

Query  656  YTLVGHVSPYQENIITLDPTTFPDNTEVSQTDRRVIPTKGALVQAEFKTRVGNRALVTLT  715
            YTLV HVSPYQEN+ITLDPTTFP+N EVSQTD RV+PTKGA+V+A F TRVG RAL+TL+
Sbjct  724  YTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLS  783

Query  716  RKDGTLLPFGTVVTLERKTGEAFESAGVVDDKGKVYLSGLSEAGKLKAQWGTNSQCYADY  775
            R DG+ LPFG+VVT E K G+   +AGVV+D+G VYLSGL E+G+LK QWG NS C A+Y
Sbjct  784  RSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANY  843

Query  776  KLPLKKGMSGIFLTRAVCM  794
            +LP  K  +GIFL R+VCM
Sbjct  844  RLPEEKEATGIFLVRTVCM  862

5) safC in NC_003198


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  669 bits (2528),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 416/839 (50%), Positives = 621/839 (75%), Gaps = 21/839 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNLFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T+L  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLIGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  --RTLWRNGGHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGEA  601
                   + GH  ++I +LW ++PL++W G   +     T   +    +   + G+NG A
Sbjct  565  YSTNAYYQRGHIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRA  623

Query  602  FSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGIV  661
            F ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+V
Sbjct  624  FDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMV  682

Query  662  IHHHGVTLGQPLQGSVALVEAPGASGVPVGPWPGVKTDFRGDTTVGNLSVYQENTVSLDP  721
            +H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LDP
Sbjct  683  LHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDP  742

Query  722  SQLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQD  781
            + +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+ 
Sbjct  743  TTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKK  802

Query  782  ----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  803  GQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

6) STBHUCCB_27130 in NC_016832


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  669 bits (2528),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 416/839 (50%), Positives = 621/839 (75%), Gaps = 21/839 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNLFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T+L  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLIGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  --RTLWRNGGHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGEA  601
                   + GH  ++I +LW ++PL++W G   +     T   +    +   + G+NG A
Sbjct  565  YSTNAYYQRGHIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRA  623

Query  602  FSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGIV  661
            F ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+V
Sbjct  624  FDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMV  682

Query  662  IHHHGVTLGQPLQGSVALVEAPGASGVPVGPWPGVKTDFRGDTTVGNLSVYQENTVSLDP  721
            +H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LDP
Sbjct  683  LHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDP  742

Query  722  SQLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQD  781
            + +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+ 
Sbjct  743  TTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKK  802

Query  782  ----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  803  GQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

7) TY21A_12985 in NC_021176


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  669 bits (2528),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 416/839 (50%), Positives = 621/839 (75%), Gaps = 21/839 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNLFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T+L  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLIGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  --RTLWRNGGHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGEA  601
                   + GH  ++I +LW ++PL++W G   +     T   +    +   + G+NG A
Sbjct  565  YSTNAYYQRGHIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRA  623

Query  602  FSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGIV  661
            F ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+V
Sbjct  624  FDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMV  682

Query  662  IHHHGVTLGQPLQGSVALVEAPGASGVPVGPWPGVKTDFRGDTTVGNLSVYQENTVSLDP  721
            +H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LDP
Sbjct  683  LHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDP  742

Query  722  SQLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQD  781
            + +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+ 
Sbjct  743  TTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKK  802

Query  782  ----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  803  GQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

8) safC in NC_004631


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  669 bits (2528),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 416/839 (50%), Positives = 621/839 (75%), Gaps = 21/839 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNLFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T+L  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLIGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  --RTLWRNGGHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGEA  601
                   + GH  ++I +LW ++PL++W G   +     T   +    +   + G+NG A
Sbjct  565  YSTNAYYQRGHIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRA  623

Query  602  FSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGIV  661
            F ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+V
Sbjct  624  FDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMV  682

Query  662  IHHHGVTLGQPLQGSVALVEAPGASGVPVGPWPGVKTDFRGDTTVGNLSVYQENTVSLDP  721
            +H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LDP
Sbjct  683  LHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDP  742

Query  722  SQLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQD  781
            + +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+ 
Sbjct  743  TTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKK  802

Query  782  ----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  803  GQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

9) SBOV02431 in NC_022241


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  667 bits (2520),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 414/840 (50%), Positives = 621/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGISPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQ+ALRP ++GI+PE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAASLGLGVSLGRWGSLSVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T+++ +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHSKENITSLWFSMSLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G H  ++I +LW +++L++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG-HIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNggygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLSVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

10) SeAg_B0331 in NC_011149


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  665 bits (2513),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/840 (50%), Positives = 620/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLSAIPQAKA  126
            + F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+LS IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQVALRTKFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQVALR  ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSGQQSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RS+ Q+G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVADSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++++S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTHIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF T++G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

11) CFSAN002050_08105 in NC_021818


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  665 bits (2515),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/840 (50%), Positives = 619/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLSAIPQAKA  126
            + F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+LS IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQVALRTKFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQVALR  ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSGQQSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RS+ Q+G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTHIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF T++G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

12) SPAB_03304 in NC_010102


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  665 bits (2515),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/840 (50%), Positives = 619/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLSAIPQAKA  126
            + F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+LS IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQVALRTKFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQVALR  ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSGQQSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RS+ Q+G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTHIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF T++G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

13) SSPA2300 in NC_011147


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  663 bits (2505),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/840 (50%), Positives = 623/840 (75%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDIWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE +WDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAASLGLGASLGRWGSLSVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T+++ +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTILMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RT L L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHSKENITSLWFSMSLSRWTG---NNVSASWQMTSPSHGGQMQQVGGNGE  600
                +  + G H  ++I +LW +++L++W G   N+++ + Q    +      + G NG 
Sbjct  565  YSTNAYYQRG-HIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNggygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

14) safC in NC_006511


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  663 bits (2505),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/840 (50%), Positives = 623/840 (75%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDIWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE +WDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAASLGLGASLGRWGSLSVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T+++ +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTILMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RT L L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHSKENITSLWFSMSLSRWTG---NNVSASWQMTSPSHGGQMQQVGGNGE  600
                +  + G H  ++I +LW +++L++W G   N+++ + Q    +      + G NG 
Sbjct  565  YSTNAYYQRG-HIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNggygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

15) safC in NC_006905


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  663 bits (2508),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/848 (49%), Positives = 621/848 (74%), Gaps = 23/848 (2%)

Query  1    MKLKQPALLLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVN  60
            + +  +  LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++N
Sbjct  24   LSVMAACTLLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILN  79

Query  61   GKRIDTRDVVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADL  118
            G R+D+RD+ F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L
Sbjct  80   GSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAEL  139

Query  119  TAIPQAKAVLDINNQQLQLSIPQLALRTKFKGIAPEDLWDDGIPAFLMNYSARTMQTDYK  178
            + IPQA    ++ +QQL LSIPQ+ALR  ++GIAPE LWDDGIPAFL+N  A T +++Y+
Sbjct  140  SVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYR  199

Query  179  MDMGRRDNSSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLT  238
                   ++ WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLT
Sbjct  200  GYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLT  259

Query  239  LGQKTSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYN  298
            LG+  + ++IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I +
Sbjct  260  LGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDS  319

Query  299  TTVAPGPFALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGR  358
             TVAPG+FAL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G 
Sbjct  320  RTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGE  379

Query  359  YRSSDSATDKAQIAQATLMYGLPWNLTAYGGIQSATHYQAASLGLGVSLGRWGSLSVDGS  418
            YRSSD A + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG 
Sbjct  380  YRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGI  439

Query  419  DTHSQRQGEAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNR  478
            ++++Q++G   + G +WRLRY++ +  T T+++ +R QY+S G++TLSDVL ++R+D  R
Sbjct  440  HSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFR  499

Query  479  LWSWRENLQPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGS  538
              S   +   S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S
Sbjct  500  AYSYSGD--RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNIS  556

Query  539  LSLNWNQN---RTLWRNGAHRKENITSLWFSMSLSRWTGNNVSASWQMTSPSHGGQTQ--  593
              +NW++N    +  + G  + E+  +LW +++L++W G   +     T   +    +  
Sbjct  557  WYVNWSRNYSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTW  614

Query  594  -QVGVNGEAFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNggygllggdysysRAMRQM  652
             + G+NG AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM
Sbjct  615  YETGLNGRAFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQM  673

Query  653  GVNIAGGIVIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLSVY  712
            +  I+GG+V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S Y
Sbjct  674  SAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPY  733

Query  713  QENTVSLDPSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFG  772
            QEN ++LDP+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFG
Sbjct  734  QENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFG  793

Query  773  AQVTVNGQD----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAG  827
            A VT +G+     G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G
Sbjct  794  AVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATG  853

Query  828  LYQMSGLC  835
            ++ +  +C
Sbjct  854  IFLVRTVC  861

16) safC in NC_022221


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  660 bits (2494),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/840 (50%), Positives = 619/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VVDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGIDIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGI++G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPDQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VP  TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAASLGLGVSLGRWGSLSVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T+++ +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHSKENITSLWFSMSLSRWTGNNVSASWQMTSPSHGGQTQ---QVGGNGE  600
                +  + G H  ++I +LW +++L++W G   +     T   +    +   + G NG 
Sbjct  565  YSTNAYYQRG-HIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNggygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLSVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

17) safC in NC_016831


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  660 bits (2494),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/840 (50%), Positives = 619/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VVDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGIDIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGI++G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPDQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VP  TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAASLGLGVSLGRWGSLSVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T+++ +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHSKENITSLWFSMSLSRWTGNNVSASWQMTSPSHGGQTQ---QVGGNGE  600
                +  + G H  ++I +LW +++L++W G   +     T   +    +   + G NG 
Sbjct  565  YSTNAYYQRG-HIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNggygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLSVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

18) SNSL254_A0338 in NC_011080


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  660 bits (2494),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 619/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVDGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD++++G RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLSAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+LS IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDVNNQQLQLSIPQVALRTKFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              +  +QQL LSIPQVALR  ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGVWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRDNL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R+D  R  S  ++ 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRLGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWLGVKTDFRGDTTVGNLSVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+  GV+TD RG T V ++S YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

19) SN31241_12980 in NC_021902


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  660 bits (2494),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 619/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVDGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD++++G RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLSAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+LS IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDVNNQQLQLSIPQVALRTKFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              +  +QQL LSIPQVALR  ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGVWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRDNL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R+D  R  S  ++ 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRLGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWLGVKTDFRGDTTVGNLSVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+  GV+TD RG T V ++S YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

20) I137_12500 in NC_021984


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 414/840 (50%), Positives = 619/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLASCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L +CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VVDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPDQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VP  TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAASLGLGVSLGRWGSLSVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T+++ +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHSKENITSLWFSMSLSRWTGNNVSASWQMTSPSHGGQTQ---QVGGNGE  600
                +  + G H  ++I +LW +++L++W G   +     T   +    +   + G NG 
Sbjct  565  YSTNAYYQRG-HIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNggygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLSVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVIVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA V  +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSADLVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

21) SeSA_A0338 in NC_011094


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  655 bits (2477),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/840 (49%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYPLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ +L+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRDNL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R+D  R  S  ++ 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW  +
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNW--S  562

Query  547  RTLWRNGAHRKENI-TSLGF--SMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
            R    N+  ++ +I  S+ +  ++PL++W G   +     T   +    +   + G+NG 
Sbjct  563  RNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLGGDYSYSRAMSQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G+YG L+G YSYS  + QM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

22) SEEB0189_17835 in NC_021844


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  647 bits (2447),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLSAIPQAKA  126
            + F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+LS IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQVALRTKFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQVALR  ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSGQQSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RS+ Q+G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

23) SeD_A0330 in NC_011205


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  647 bits (2447),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 414/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAKA  126
            + F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQVALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSIPQVALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSGQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RS+  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R+D  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYHLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

24) SE451236_07535 in NC_021820


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

25) safC in NC_016856


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

26) STMMW_03111 in NC_016854


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

27) safC in NC_003197


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

28) safC in NC_016810


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

29) safC in NC_016857


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

30) STMDT12_C03000 in NC_016860


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

31) STU288_13220 in NC_021151


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

32) safC in NC_016863


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

33) CFSAN001921_15885 in NC_021814


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/840 (50%), Positives = 618/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHTYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A+TY+FDASML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPVLAPCLTVSQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKA  126
            + F+ EKD++G   L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDN  186
              ++ +QQL LSIPQ+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++T+S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R++  R  S   + 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+  I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V +++ YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

34) safC in NC_017046


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  633 bits (2393),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 406/819 (50%), Positives = 603/819 (74%), Gaps = 19/819 (2%)

Query  1    MLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRDVVFKLEKDGQGTPVLAPCLTV  60
            ML +++KGVD++LF++G Q PG Y VD+++NG RVD+RD+ F+ EKD++G   L  CLT 
Sbjct  49   MLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTR  108

Query  61   SQLSRYGVKTEDYPQLWKA--AKPPDECADLTAIPQAKAVLDINNQQLQLSIPQLALRPE  118
              L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA    ++ +QQL LSIPQ+ALRP 
Sbjct  109  EMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPP  168

Query  119  FKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMVGRDNSSWVQLQPGINIGAWRVRNAT  178
            ++GIAPE LWDDGIPAFL+N  A T++++Y+    +  ++ WV L+PGIN+G+WRVRN T
Sbjct  169  LRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLT  228

Query  179  SWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQGEIFDSVPFTGVMLASDDNMVP  238
            +W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + ++IFDSVPF GVML++D++MVP
Sbjct  229  TWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVP  288

Query  239  YSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPFALRDLSVTDSSGDLHVTVWEA  298
            Y++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+FAL DL++T+S+GDL+VTV E+
Sbjct  289  YNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQES  348

Query  299  DGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSATDKAQIAQATLMYGLPWNLTAY  358
            DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A + + ++Q ++MYGLPW LTA+
Sbjct  349  DGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAF  408

Query  359  GGIQSATHYQAAllglggslgrwgslsVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATG  418
            GG Q ++HYQ+A LGLG S+GR G++SVDG ++++Q++G   + G +WRLRY++ +  T 
Sbjct  409  GGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTN  468

Query  419  TNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLWSWRENLQPSSRTTLMLSQSWGRHLGNL  478
            T++  +R QY+S G++TLSDVL ++R++  R  S   +   S RTTL L+QS G  LG +
Sbjct  469  TDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD--RSRRTTLRLNQSLG-SLGYM  525

Query  479  SLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN---RTLWRNGAHRKENITSLW  535
            S+ GSR + R+    +DS+G+S GTS    S  +NW++N    +  + G  + E+  +LW
Sbjct  526  SFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQRG--HIEDSINLW  583

Query  536  FSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGEAFSQQLDWEVRQSYRADAPPG  592
             ++PL++W G   +     T   +    +   + G+NG AF ++L W+V +   A ++  
Sbjct  584  MNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSER-IAPGSEN  642

Query  593  GGNNSALHLAWNgdygllggdysysRAMRQMGVNIAGGIVIHHHGVTLGQPLQGSVALVE  652
              ++S L+L W G YG L+G YSYS  +RQM+  I+GG+V+H++G+TLGQ  +++VALV 
Sbjct  643  NVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVV  702

Query  653  APGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLDPSRLPDDAEVTQTDVRVVPTE  712
            APG +G +VG+ PGV+TD RG T V +++ YQEN ++LDP+ +P++ EV+QTD RVVPT 
Sbjct  703  APGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTK  762

Query  713  GAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQD----GSAALVDTDSQVYLTG  768
            GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+     G+A++V+ +++VYL+G
Sbjct  763  GAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSG  822

Query  769  LADKGELTVKWG-AQQCRVNYRLPAHKGIAGLYQMSGLC  806
            L + G+L V+WG    CR NYRLP +K  +G++ +  +C
Sbjct  823  LDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

35) D781_3832 in NC_020064


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  632 bits (2389),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/837 (51%), Positives = 618/837 (74%), Gaps = 20/837 (2%)

Query  23   SSTHARVWSFDTTQLAGDEQNVDIAIFEQGGQLPGKYFIDIVLNGVHVDSREMIFHMEKD  82
            ++T+AR  SFD++ L G+ + VD+++FE+G+QLPG Y +DI+LNG +VDSR+M F+ EKD
Sbjct  36   GNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKD  95

Query  83   AEGAPVLKTCLTRAQLISYGVNVDAYAALFAPSDNM-SDQCARLSVIPQATEVFQFNSQQ  141
            AEG   LKTCLTR  L  YGV  + Y+ LF   D   ++ CA LSVIPQATE +QF SQQ
Sbjct  96   AEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQ  155

Query  142  LQLSIPQVAMLPKLRGIAPPVLWDDGAPAFLMNYQTNVTRSDYRGDGQKHSDALFARVDP  201
            L LSIPQVA+ P LRGIAP  LWDDG PAFL+N Q+N +RS+YRG G+  +D     ++P
Sbjct  156  LLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEP  215

Query  202  GINLGAWRLRNMTTFQKSGNRPGKWQTVESWAERGLYGLQSRLTLGERYTPSDIFNSVPF  261
            GINLG+WR+RN+TT ++S+ +PG+W++   +AERG+ +L+SRLTLGE YTPSDIF+SVPF
Sbjct  216  GINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPF  275

Query  262  RGGMLGSDDLMVPYNQRDFAPVVRGIARTQARIEVRQGGYVIYSSTVAPGAFALSDLP-A  320
            RG MLG+D+ MVPYNQR+FAPVVRGIARTQARIEVRQ GY+I S TVAPGAFAL+DLP +
Sbjct  276  RGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLT  335

Query  321  GSNGDLQVTVYETDGRPQVFTVPWSTPAIALRQGYLRYNLMTGQYHPENRAVKQAPVVQA  380
            GS GDLQVTV E+DG +QVFTVP +TPAIALR+GY++Y++  G+Y++ + AV ++P+ Q 
Sbjct  336  GSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQM  395

Query  381  TVMYGLPWNLTGYGGMQWSEHYQgaalglgvllgdlgalsldgMQGYGAEPEGRRTQGQT  440
            +VMYGLPW LT++GG Q S HYQ+AALGLG  +G LGA+S+DG+++ G +       G+T
Sbjct  396  SVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGET  455

Query  441  WRFRYNKTLAATNTGISLASSQYSASGGHSMNEVLDRWQDNEYAAGGrfrrwddrrrkar  500
            WR+RYNK++  TNT+++ A  QY++SG H++++VL   +++++ A           R  R
Sbjct  456  WRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA-----YSYSGDRSRR  510

Query  501  sdVTIGQSFDNLGYLNVSASRESYWDSPQTRDEVMASWSTSAW-GVNWSVNWTQRKQPAR  559
            + + + QS+++LGY++  +SR+ ++++ Q +D    S +TS W  ++W VNW++      
Sbjct  511  TTLRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTS-WKNISWYVNWSR----NY  565

Query  560  GNAAYGRHYQREQEGSLWVSVPLERWTGG---NAYATYQAQSNSDGRVRHEVGLTGNAFE  616
            +  AY ++ + E+  +LW+++PL +W GG   +   T Q+Q  ++   + E GL G AF+
Sbjct  566  STNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFD  625

Query  617  RQLNWNVRQQLEQGGGYDRQNGGLVNLSWNGAYGVLNGGYSYNKNSRQSNAGLAGGLVVH  676
            R+L W+V +++  G+  +  +++ +NL W G+YG L G YSY+   RQ +AG++GG+V+H
Sbjct  626  RRLYWDVSERIAPGSE-NNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLH  684

Query  677  QHGITLGQPLGRTTalvaapgvagasvgswagvRTDSRGYAMQTGLTPYQENTVELDPLT  736
            ++GITLGQ    T ALV APGV GASVGS +GVRTD+RGY++   ++PYQEN + LDP T
Sbjct  685  NEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTT  744

Query  737  LPQDAEVPQTVMRLVPTEGAVIPVRFTARIGARAVVALQQSDGKSVPFGALVTLDGER--  794
            +P++ EV+QT  R+VPT GAV+  +F +R+G+RA+++L +SDG  +PFGA+VT +G +  
Sbjct  745  FPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQ  804

Query  795  -STGSGIVGEAGQVYLSGLPDSGELDVRWGEGKRCHAAFQLPEKKGPAGIYNLQSPC  850
             + G+G+VG+ G+VYLSGL ++G+L V+WG    C+A ++LPE K ++GI+ +++ C
Sbjct  805  MPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

36) safC in NC_011294


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  622 bits (2350),  Expect = 2e-179, Method: Compositional matrix adjust.
 Identities = 414/840 (50%), Positives = 620/840 (74%), Gaps = 23/840 (2%)

Query  9    LLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNLGVQQPGTYRVDVMVNGKRVDTRD  68
            LL+ +     ++A++Y+FDASML +++KGVD++LF+ G Q PG Y VD+++NG RVD+RD
Sbjct  32   LLYTGN----TEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRD  87

Query  69   VVFKLEKDGQGTPFLAPCLTVSQLSRYGVKTEDYPQLWKA--AKTPDECADLTAIPQAQA  126
            + F+ EKD++G  +L  CLT   L+RYGV TE+YP+L  +  +K ++ CA+L+ IPQA  
Sbjct  88   MAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATE  147

Query  127  VLDinnqqlqlsisqlalRPEFKGIAPEDLWDDGIPAFLMNYSARTTQTDYKMDMERRDN  186
              ++ +QQL LSI+Q+ALRP ++GIAPE LWDDGIPAFL+N  A T++++Y+       +
Sbjct  148  TYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTD  207

Query  187  SSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLGQKTSQG  246
            + WV L+PGIN+G+WRVRN T+W+RSS  +G+W++AY  AERG+ SL+SRLTLG+  + +
Sbjct  208  NYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPS  267

Query  247  EIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPF  306
            +IFDSVPF GVML++D++MVPY++R+FAPVVRGIARTQAR+EV+QNGY I + TVAPG+F
Sbjct  268  DIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAF  327

Query  307  ALRDLSVADSSGDLHVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSAT  366
            AL DL++++S+GDL+VTV E+DG++Q+F VPY TPAIAL++GY+KYS+ +G YRSSD A 
Sbjct  328  ALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAV  387

Query  367  DKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAslglggslgrwgslsVDGSDTHSQRQG  426
            + + ++Q ++MYGLPW LTA+GG Q ++HYQ+A+LGLG S+GR G++SVDG ++++Q++G
Sbjct  388  EHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKG  447

Query  427  EAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHDGNRLWSWRDNL  486
               + G +WRLRY++ +  T T++  +R QY+S G++TLSDVL ++R+D  R  S  ++ 
Sbjct  448  RDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGD-  506

Query  487  QPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQN  546
              S RTTL L+QS G  LG +S+ GSR + R+    +DS+G+S GTS    S  +NW++N
Sbjct  507  -RSRRTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRN  564

Query  547  ---RTLWRNGAHRKENITSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQ---QVGVNGE  600
                +  + G  + E+  +LW ++PL++W G   +     T   +    +   + G+NG 
Sbjct  565  YSTNAYYQRG--HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGR  622

Query  601  AFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNgdygllggdysysRAMRQMGANIAGGI  660
            AF ++L W+V +   A ++    ++S L+L W G YG L+G YSYS  +RQM+A I+GG+
Sbjct  623  AFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGM  681

Query  661  VIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLSVYQENTVSLD  720
            V+H++G+TLGQ  +++VALV APG +G +VG+ PGV+TD RG T V ++S YQEN ++LD
Sbjct  682  VLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLD  741

Query  721  PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQ  780
            P+ +P++ EV+QTD RVVPT GAVV AKF TR+G+RAL+TL R DGS +PFGA VT +G+
Sbjct  742  PTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGK  801

Query  781  D----GSAALVDTDSQVYLTGLADKGELTVKWG-AQQCRVNYQLPAHKGIAGLYQMSGLC  835
                 G+A++V+ +++VYL+GL + G+L V+WG    CR NY+LP +K  +G++ +  +C
Sbjct  802  KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVC  861

37) SN31241_6420 in NC_021902


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  605 bits (2287),  Expect = 2e-174, Method: Compositional matrix adjust.
 Identities = 385/731 (53%), Positives = 555/731 (76%), Gaps = 29/731 (3%)

Query  1    MLLSIPQIALRPHYTGIAPQALWNDGIPAFLMDYQASSFRSSYRSNGATLNTNGMDVQLL  60
            +LLSIPQ+ALRP   GIAP+ALW+DGIPAFL++ QA++ RS YR+ G ++ T+   V L 
Sbjct  156  LLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSV-TDNYWVTLE  214

Query  61   PGLNFGAWRLRNLTTWQKQNSQKGKWQTSYTYAERGLYSLKSRLTLGDRFTPSDVFDSVP  120
            PG+N+G+WR+RNLTTW++ ++Q G+W+++Y  AERG+ SL+SRLTLG+ +TPSD+FDSVP
Sbjct  215  PGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVP  274

Query  121  FRGGMIGSDDSMVPYSQRAFAPVVQGVALTQARIEVKQNGYVIYNTTVAPGPFALSDLPG  180
            FRG M+G+D+SMVPY+QR FAPVV+G+A TQARIEV+QNGY+I + TVAPG+FAL+DLP 
Sbjct  275  FRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPL  334

Query  181  VNGGGDLQVTVFEADGTRQIFTVPYTTPAIALRQGYLKYNVMMGQYRSADTSVDKEPVGQ  240
              +GGDLQVTV E+DGT Q+FTVPYTTPAIALR+GY+KY++  G+YRS+D +V+  P+GQ
Sbjct  335  TGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQ  394

Query  241  ATIMYGLPWNLTAYSGGQWASHYQAGTLGLGVSLGAFGAVSVDSTLSRGQKRNQDVERGQ  300
             ++MYGLPW LTA++G+Q +SHYQ+++LGLG S+G +GAVSVD+  SRGQ++ +D E G+
Sbjct  395  MSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGE  454

Query  301  SWRVRYSKSFESTNTGFTLASYQYASPGYNTLSGVLDSYRSGEAWPSKEYWYPGAGYQSS  360
            +WR+RY+KSFE TNT++T A YQY+S+G++TLS+VL ++R+++    + Y Y+G      
Sbjct  455  TWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDN---FRAYSYSGD-----  506

Query  361  WNNNNFADKRKSRTSVTLNQPLGEWGALYFSGSREDYWNRSQSQNEVSARYSGPMIQGIS  420
                     R  RT++ LNQ+LG  G + F GSR+++++  Q Q+  +  Y G   + IS
Sbjct  507  ---------RSRRTTLRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSY-GTSWKNIS  556

Query  421  WSVDWTQRKWNYSIYRGNNDNKTEQSINLWINVPLNRWLGG---NTSVSYQMQNRTNQGT  477
            W V+W+   +NYS     +    E+SINLW+N+PL +W+GG   + +V+ Q Q  T Q T
Sbjct  557  WYVNWS---RNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNT  613

Query  478  LHNMGLNGYAFDQRLYWNVSEQIAQGGTGSNQNSSDLNLRWNGTYGEISGGYGYRKNGNQ  537
              + GLNG AFD+RLYW+VSE+IA  G+ +N +SS LNLRW GTYGE++G Y+Y     Q
Sbjct  614  WYETGLNGRAFDRRLYWDVSERIAP-GSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQ  672

Query  538  VNAGVQGSMVVHRDGVTFGQRLGKTAALIKAPDASGVSVINAAGVKTDFRGYTTLGNLAP  597
            ++AG+ G+MV+H +G+T+GQ+   T AL+ AP+ +G SV + +GV+TD RGYT + +++P
Sbjct  673  MSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSP  732

Query  598  YQENIISLNPVTLPANVAIPQTDTRVVPTEGAIIPASFATRVGGRALITLTQVNGKPVPF  657
            YQEN+I+L+P T+P NV ++QTDTRVVPT GA++ A F TRVGGRALITL++ +G  +PF
Sbjct  733  YQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPF  792

Query  658  GAVASLVGQE-DTRWDTGIVGDSGDVYMSGLPEKGQLQVMWGNGQQQHCRADYQLLKSDE  716
            GAV +  G+  +   ++G+VGD+G+VY+SGL E GQL+V W  G++  CRA+Y+L    E
Sbjct  793  GAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQW--GRNSSCRANYRLPEEKE  850

Query  717  IAGVSNLKALC  727
             +G+  ++++C
Sbjct  851  ATGIFLVRTVC  861

38) YPK_2757 in NC_010465


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  576 bits (2174),  Expect = 2e-165, Method: Compositional matrix adjust.
 Identities = 363/833 (44%), Positives = 571/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATSAGLGVLLGEYGALSSSITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIEMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E  + G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDAGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  +G++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

39) YE105_C2661 in NC_015224


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  571 bits (2155),  Expect = 6e-164, Method: Compositional matrix adjust.
 Identities = 353/815 (44%), Positives = 573/815 (71%), Gaps = 31/815 (3%)

Query  24   TDLSLFEQGGQLPGTYQVDIFLGDEKMDSTNVTFHAVKSPTGEYSLQSCLTKEQLSRYGV  83
             DL+LFE+G+QLPG Y VDI+L + ++DS +++F++ K + G   L++CLT+E L+RYGV
Sbjct  57   VDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGV  116

Query  84   DVDNYPELLPPEKNIQQDKQASQCVNLAAIPQASEEFEFYAMRLVLNIPQVALRP--KDE  141
              ++YPEL+  +    ++K+A  C +L+ IPQA+E ++F + +L+L+IPQVALRP  ++ 
Sbjct  117  MTEEYPELFHGD----DGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRGI  172

Query  142  IPVERWDDGITAFLLNYMANSSTTTYRQTGEQQSSHY-VQLYPGFNIGAWRIRNATSWNQ  200
             P   WDDGI AFLLN  AN+S + YR  G   + +Y V L PG+N+G+WR+RN T+WN+
Sbjct  173  APEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNR  232

Query  201  SGNSAGKWQSSYIYATRGLYRLKSRVTLGQSYTPGDFFDSVPFSGVMLGDDDNMLPSSQR  260
            S+  +G+W+S+YI A RG+  L+SR+TLG+ YTP+D+FDSVPF GVMLG D++M+P +QR
Sbjct  233  SSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQR  292

Query  261  DFIPVVRGIARSQARVEVRQNGYLLYSTVVSPGPFELTDILPSHSNGDLHVTVLESNGTT  320
            +F PVVRGIAR+QAR+EVRQNGYL+ S  V+PG+F LTD+  + S GDL+VTV ES+GT+
Sbjct  293  EFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTA  352

Query  321  QQFTVPYSVPAIALRKGRLRYNLMAGRYRPANVDVETTPIAQATVAYGLPWNLTAFVGGQ  380
            Q FTVPY+ PAIALR G ++Y++ +G YR+++  VE +P++Q +V YGLPW LTAF G+Q
Sbjct  353  QVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQ  412

Query  381  WSPHYQATTAGMGVMLGDYGALSSSITQATSEYRQQQPVKGQVWEVRYNKTLQASDTSFS  440
             S+HYQ+++ G+G  +G  GA+S    ++ ++ + ++   G+ W +RYNK+++ ++T ++
Sbjct  413  MSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLT  472

Query  441  VVNSQYSTADFSNLSDVLQSYRRHDYSRRDWHSNSLRNQTHVVVGQPLGQFGYLNLNWSR  500
                QY++++F  LSDVL ++R +++      ++  R +T + + Q+LG +GY+++  SR
Sbjct  473  AARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGDRSR-RTTLRLNQSLGSLGYMSFYGSR  531

Query  501  QNYRDAPAS-SSWGVQYSFNIGNLYCSLDWTQ----NQY--RGNQDRLLSLSVSMPL---  550
            +++R+      S G+ Y+ +  N+   ++W++    N Y  RG+ +  ++L +++PL   
Sbjct  532  DEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQW  591

Query  551  --GRERDTYAAYRMTSSDNSKD-HEMSLYGHAFDNRLSWNVRQTERYAQ-FHSGENSGSL  606
              GR+ D   + +   +   +   E +L G+AFD RL W+V  +ER A   ++  +S+ L
Sbjct  592  IGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV--SERIAPGSENNVDSSRL  649

Query  607  GLDWQGSYGDIGGNYYYTPTIRQFSANVSGGAVIHRHGLTLGPQINGTAALVEVPGVSGV  666
             L W G+YG+++G Y Y++ IRQ SA +SGG V+H +G+TLG + ++T ALV  PGV+G 
Sbjct  650  NLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGA  709

Query  667  STSEDHRLKTDFRGYSIVPNIFPYEEHDILLETTDLPPDAEVTKTDAKVLPTEGAIVRAS  726
            S +    ++TD RGY++V ++ PY+E+ I L+ T +P + EV++TD++V+PT GA+VRA 
Sbjct  710  SVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAK  769

Query  727  FSPQIGARALMTITRNNGETIPFGAMASLVNQ----PANAAIVDEGGKAYLTGLPETGQL  782
            F  ++G+RAL+T++R++G  +PFGA+ +   +    P+ A++V++ G  YL+GL ETGQL
Sbjct  770  FITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQL  829

Query  783  LVQWGRGASQQCRVDYQLANAKKGDAGLYMLSGVC  817
             VQWGR +S  CR +Y+L++ K + +G++++  VC
Sbjct  830  KVQWGRNSS--CRANYRLPEEKEA-TGIFLVRTVC  861

40) Y11_03331 in NC_017564


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  570 bits (2152),  Expect = 1e-163, Method: Compositional matrix adjust.
 Identities = 350/818 (43%), Positives = 567/818 (70%), Gaps = 37/818 (4%)

Query  47   TDLSLFEQGGQLPGTYQVDIFLGDEKMDSTNVTFHAVKSPTGEYSLQSCLTKEQLSRYGV  106
             DL+LFE+G+QLPG Y VDI+L + ++DS +++F++ K + G   L++CLT+E L+RYGV
Sbjct  57   VDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGV  116

Query  107  DVDNYPELLPPEKNIQQDKQASQCVNLAAIPQASEEFEFYAMRLVLNIPQVALRP--KDE  164
              ++YPEL+  +    ++K+A  C +L+ IPQA+E ++F + +L+L+IPQVALRP  ++ 
Sbjct  117  MTEEYPELFHGD----DGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRGI  172

Query  165  IPVERWDDGITAFLLNYMANSSTTTYRQTGEQQSSHY-VQLYPGFNIGAWRIRNATSWNQ  223
             P   WDDGI AFLLN  AN+S + YR  G   + +Y V L PG+N+G+WR+RN T+WN+
Sbjct  173  APEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNR  232

Query  224  SGNSAGKWQSSYIYATRGLYRLKSRVTLGQSYTPGDFFDSVPFSGVMLGDDDNMLPSSQR  283
            S+  +G+W+S+YI A RG+  L+SR+TLG+ YTP+D+FDSVPF GVMLG D++M+P +QR
Sbjct  233  SSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQR  292

Query  284  DFIPVVRGIARSQARVEVRQNGYLLYSTVVSPGPFELTDILPSHSNGDLHVTVLESNGTT  343
            +F PVVRGIAR+QAR+EVRQNGYL+ S  V+PG+F LTD+  + S GDL+VTV ES+GT+
Sbjct  293  EFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTA  352

Query  344  QQFTVPYSVPAIALRKGRLRYNLMAGRYRPANVDVETTPIAQATVAYGLPWNLTAFVGGQ  403
            Q FTVPY+ PAIALR G ++Y++ +G YR+++  VE +P++Q +V YGLPW LTAF G+Q
Sbjct  353  QVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQ  412

Query  404  WSPHYQATTAGMGVMLGDYGALSSSITQATSEYRQQQPVKGQVWEVRYNKTLQASDTSFS  463
             S+HYQ+++ G+G  +G  GA+S    ++ ++ + ++   G+ W +RYNK+++ ++T ++
Sbjct  413  MSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLT  472

Query  464  VVNSQYSTADFSNLSDVLQSYRRHDYSRRDWHSNSLRNQTHVVVGQPLGQFGYLNLNWSR  523
                QY++++F  LSDVL ++R +++      ++  R +T + + Q+LG +GY+++  SR
Sbjct  473  AARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGDRSR-RTTLRLNQSLGSLGYMSFYGSR  531

Query  524  QSYRDAPASSSWGAQYSFNIGNLYCSLDW--------TQNQY--RGNQDRLLSLSVSMPL  573
            + +R+          ++ + G    ++ W        + N Y  RG+ +  ++L +++PL
Sbjct  532  DEFRHNRQKQD---SFGMSYGTSWKNISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPL  588

Query  574  -----GRERDTYAAYRMTSSDNSKD-HEMSLYGHAFDNRLSWNVRQTERYAQ-FHSGENS  626
                 GR+ D   + +   +   +   E +L G+AFD RL W+V  +ER A   ++  +S
Sbjct  589  GQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV--SERIAPGSENNVDS  646

Query  627  GSLGLDWQGSYGDIGGNYYYTPTIRQFSANVSGGAVIHRHGLTLGPQINGTAALVEVPGV  686
            + L L W G+YG+++G Y Y++ IRQ SA +SGG V+H +G+TLG + ++T ALV  PGV
Sbjct  647  SRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGV  706

Query  687  SGVSTSEDHRLKTDFRGYSIVPNIFPYEEHDILLETTDLPPDAEVTKTDAKVLPTEGAIV  746
            +G S +    ++TD RGY++V ++ PY+E+ I L+ T +P + EV++TD++V+PT GA+V
Sbjct  707  NGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVV  766

Query  747  RASFSPQIGARALMTITRNNGETIPFGAMASLVNQ----PANAAIVDEGGKAYLTGLPET  802
            RA F  ++G+RAL+T++R++G  +PFGA+ +   +    P+ A++V++ G  YL+GL ET
Sbjct  767  RAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDET  826

Query  803  GQLLVQWGRGASQQCRVDYQLANAKKGDAGLYMLSGVC  840
            GQL VQWGR +S  CR +Y+L++ K + +G++++  VC
Sbjct  827  GQLKVQWGRNSS--CRANYRLPEEKEA-TGIFLVRTVC  861

41) ECSE_P2-0002 in NC_011413


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  569 bits (2147),  Expect = 3e-163, Method: Compositional matrix adjust.
 Identities = 368/828 (45%), Positives = 580/828 (71%), Gaps = 23/828 (2%)

Query  21   GRTYTFDPslvessggdsvdvslFNQGLQLPGEYFVSIFVNGEKVGSDNINFRIENHNGE  80
            +RTY+FD+S++ ++G +      F++G QLPG Y V I++NG +V+S ++ FR E++   
Sbjct  40   ARTYSFDASMLKGGGKGVDLTL-FEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  81   DT-LSPCLNADQLTKYGIDIHKYSDLFNAG----PEQCANLWAIPQADIQFDFNQqklsl  135
             T L  CL  + L++YG+  + Y++LF+++    +E CA+L  IPQA   ++F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  llptqallpklNGIAPEQLWDDGIPALFMNYQTNMQQREYQGAYKSHDESYYAQLQPGLN  195
             +P  AL P L GIAPE LWDDGIPA+++N Q+N  + EY+G  KS  ++Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  196  IGPWRFRSAASWQKEQG----WQRSYIYAERGLNTIKGRLTLGESYSDGSIFDSIPFTGG  251
            +GPWR R+ ++W++  G    W+ +YI AERG+N++++RLTLGE Y+ + IFDS+PF G 
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  252  KLASDETMLPYDQWSFSPVIRGVARTQARVEVQQNGYTVSNDLIPSGPFELTNLPLGGGS  311
             L++DE+M+PY+Q+ F+PV+RG+ARTQAR+EV+QNGY + +  +++G+F LT+LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  312  GDLKVIVHESDGTQQVFTVPYDTPAVALRQGYFEYSVMGGEYRPANDAVQTTPVGALEMK  371
            GDL+V V+ESDGT QVFTVPY TPA+ALR+GY  YS+ GGEYR+++DAV+ +P+G + + 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  372  YGLPWNLTLYGGLQGAGNYQAAALGIGSLLGDFGALSADVVQSNSKKDNQQKESGQRWRV  431
            YGLPW LT +GG Q +++YQ+AALG+G  +G +GA+S D ++S +++  ++ E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  432  RYNKSLD-SGTSVNIASEEYATEGFNTLSDTLNTYCKPDAGNICYSDYKKPKNKVNLSIS  490
            RYNKS++ + T +  A  +Y++ GF+TLSD L+T+ + +     YS+      +  L ++
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSG--DRSRRTTLRLN  516

Query  491  QTTDGWGTFNFNGYRQNYWNDKSTTTSFTAGYSRMFDSGISLNVNLSKTQNIDKNGKKTN  550
            Q+ ++ G  +F G R+++++++    SF  +Y+    + IS  VN S+  + +   ++ +
Sbjct  517  QSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRGH  575

Query  551  -DRLTSLWLSFPLSRWLS--NSSVNANYQMTSDTRGDSMHEFGVYGDAFNRQLHWDLRER  607
             +   +LW+++PL++W++  ++ +N   Q    T  ++  E G+ G AF+R+L WD+ ER
Sbjct  576  IEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSER  635

Query  608  YRDNASDNKASSALSLNYRGTYGELRGNYSYDKKQRQLGIGINGNIVATQYGITAGQSSG  667
                + +N  SS L+L   GTYGEL G YSY    RQ++ GI+G +V  + GIT GQ + 
Sbjct  636  IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGE  695

Query  668  DTMALVQAPGVDGASVGYWPGMKTDFRGYTSYGYLTPYRENNIDINPVTLPKNAEISQTS  727
            DT+ALV APGV+GASVG  PG++TD RGYT    ++PY+EN I ++P T+P N E+SQT 
Sbjct  696  DTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTD  755

Query  728  TRVVPTKGAVVLAKFDTRIGGRLLLQLKRSDNKPVPFGSVATVEGQ----ASSSGIVGDN  783
            TRVVPTKGAVV AKF TR+GGR L+ L RSD   +PFG+V T EG+    ++++G+VGDN
Sbjct  756  TRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDN  815

Query  784  SQVYLTGVPKEATVKIQWGKDKTQSCHARVLLPEDVNTTGIYNLTAVC  831
            ++VYL+G+   + +K+QWG++   SC+A   LPE+ ++TGI+ + +VC
Sbjct  816  GEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVC  861

42) A1122_21617 in NC_017169


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

43) YPA_MT0069 in NC_008120


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

44) caf1A in NC_017266


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

45) caf1A in NC_005815


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

46) caf1A in NC_003134


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

47) caf1A in NC_017158


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

48) Y1099 in NC_004838


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

49) YPN_MT0065 in NC_008118


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

50) YPDSF_4097 in NC_009378


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  566 bits (2136),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 357/830 (44%), Positives = 575/830 (70%), Gaps = 27/830 (3%)

Query  21   GRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NG  79
            +R+Y+FD++ML   +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +G
Sbjct  40   ARTYSFDASML-KGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEG  98

Query  80   KELLWPCLSSLQLTKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSL  135
            K  L  CL+   L++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L
Sbjct  99   KTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLL  158

Query  136  IVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLN  194
             +P  AL P + GI P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N
Sbjct  159  SIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGIN  218

Query  195  IGAWRFRSSTSWWKQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGI  250
            +G+WR R+ T+W +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+
Sbjct  219  LGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGV  278

Query  251  KIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGS  310
             +++DESMVPY Q++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++
Sbjct  279  MLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSG  338

Query  311  GELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMK  370
            G+L+V ++ESDGT QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ 
Sbjct  339  GDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVM  398

Query  371  YGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRV  430
            YGLP+ LT +GG Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+
Sbjct  399  YGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRL  458

Query  431  RYNKYLQ-SGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNL  488
            RYNK ++ + T L  A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L
Sbjct  459  RYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRL  515

Query  489  SQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKT  548
            +QS+ + G ++F G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++ 
Sbjct  516  NQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRG  574

Query  549  S-ELLSNIWLSFPLSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRE  605
              E   N+W+++PL++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV E
Sbjct  575  HIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSE  634

Query  606  RFN-EKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKT  664
            R+      +  S+ LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK 
Sbjct  635  RIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKG  694

Query  665  GDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNN  724
             DT+ALV AP+++GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++ 
Sbjct  695  EDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQT  754

Query  725  IVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGD  780
               V+PTKGAVV AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGD
Sbjct  755  DTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGD  814

Query  781  NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  830
            N+ VYL+GL   +++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  815  NGEVYLSGLDETGQLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

51) psaC in NC_017265


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  565 bits (2132),  Expect = 4e-162, Method: Compositional matrix adjust.
 Identities = 369/856 (44%), Positives = 585/856 (69%), Gaps = 36/856 (4%)

Query  6    VQFTTITL-LMSTSFLV-----GAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDI  59
             ++T+++L +M++  L+      A+ YSFD+++L +G +  D +LFE+G +LPG Y VDI
Sbjct  17   TKITAVALSVMAACTLLYTGNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDI  76

Query  60   ILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPC  119
            ILNG++VDS +++F++EK + G  +L++CLT+E L+RYGV  + YPEL  +    ++++C
Sbjct  77   ILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEAC  136

Query  120  VNLAAIPQASEEFQFYNMQLVLSIPQAALRPE--GEVPIERWDDGITAFLLNYMANISET  177
             +L+ IPQA+E +QF + QL+LSIPQ ALRP   G  P   WDDGI AFLLN  AN S +
Sbjct  137  AELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRS  196

Query  178  QFRQNGGYRRSQY-IQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKS  236
            ++R  G     +Y + L PG+NLG+WRVRN T W++S+++ G+W+SAY  A RGI  L+S
Sbjct  197  EYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRS  256

Query  237  RVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYL  296
            R+TLGE YTP+D+FDS+PFRGVMLG D +M P NQR+F PVVRGIAR+QA++E+RQNGYL
Sbjct  257  RLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYL  316

Query  297  IYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLV  356
            I S  V+PG+F L+D+  + SG+DL+V V ES+G++Q F VPY  PAIALR G ++Y++ 
Sbjct  317  IDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIA  376

Query  357  AGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATsaglggllgeygalss  416
            +G+YR+++  VE +P++Q +V YGLPW LTAF G Q S HYQ+++ GLG  +G  GA+S 
Sbjct  377  GGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSV  436

Query  417  sITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQS  476
               ++ +Q   ++   G++W +RYNK+++ ++T ++    QY+++GF TLSDVL ++R+ 
Sbjct  437  DGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRND  496

Query  477  GSGDNRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYN  536
                     ++ SR   LR      + QSLG +GY+++  SR+ +R     ++S+G+ Y 
Sbjct  497  NFRAYSYS-GDRSRRTTLR------LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYG  549

Query  537  LNVGNSFWALSWVQNANEN------KNDRILSLSVSIPL----GGHHDTYASYRMTSSNG  586
             +  N  W ++W +N + N        +  ++L ++IPL    GG+++       T    
Sbjct  550  TSWKNISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTT  609

Query  587  SNDH--EIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTP  644
            +++   E G+ G+AFD RL W V +    G +++  +S+ L L W G+YG++AG Y Y++
Sbjct  610  GQNTWYETGLNGRAFDRRLYWDVSERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSS  668

Query  645  SIRQLSADVSGGAIIHRHGLTLGPQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVS  704
             IRQ+SA++SGG ++H +G+TLG + ++T  LV  PGV G +      ++TD RGY++V+
Sbjct  669  YIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVN  728

Query  705  GLSPYQEHDIVLETADLPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQ  764
             +SPYQE+ I L+ + +P + EV++TDT+V+PT GA+VRA F  ++G++AL+T++R++G 
Sbjct  729  HVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGS  788

Query  765  TIPFGAMASLVNQ----SANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLS  820
             +PFGA+ +   +    ++ A++V++ G  YL+GL ETGQL VQWG++++  CR +Y+L 
Sbjct  789  RLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-  845

Query  821  PAEKGDTGLYMLSGVC  836
            P EK  TG++++  VC
Sbjct  846  PEEKEATGIFLVRTVC  861

52) psaC in NC_005810


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  565 bits (2132),  Expect = 4e-162, Method: Compositional matrix adjust.
 Identities = 369/856 (44%), Positives = 585/856 (69%), Gaps = 36/856 (4%)

Query  6    VQFTTITL-LMSTSFLV-----GAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDI  59
             ++T+++L +M++  L+      A+ YSFD+++L +G +  D +LFE+G +LPG Y VDI
Sbjct  17   TKITAVALSVMAACTLLYTGNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDI  76

Query  60   ILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPC  119
            ILNG++VDS +++F++EK + G  +L++CLT+E L+RYGV  + YPEL  +    ++++C
Sbjct  77   ILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEAC  136

Query  120  VNLAAIPQASEEFQFYNMQLVLSIPQAALRPE--GEVPIERWDDGITAFLLNYMANISET  177
             +L+ IPQA+E +QF + QL+LSIPQ ALRP   G  P   WDDGI AFLLN  AN S +
Sbjct  137  AELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRS  196

Query  178  QFRQNGGYRRSQY-IQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKS  236
            ++R  G     +Y + L PG+NLG+WRVRN T W++S+++ G+W+SAY  A RGI  L+S
Sbjct  197  EYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRS  256

Query  237  RVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYL  296
            R+TLGE YTP+D+FDS+PFRGVMLG D +M P NQR+F PVVRGIAR+QA++E+RQNGYL
Sbjct  257  RLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYL  316

Query  297  IYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLV  356
            I S  V+PG+F L+D+  + SG+DL+V V ES+G++Q F VPY  PAIALR G ++Y++ 
Sbjct  317  IDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIA  376

Query  357  AGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATsaglggllgeygalss  416
            +G+YR+++  VE +P++Q +V YGLPW LTAF G Q S HYQ+++ GLG  +G  GA+S 
Sbjct  377  GGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSV  436

Query  417  sITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQS  476
               ++ +Q   ++   G++W +RYNK+++ ++T ++    QY+++GF TLSDVL ++R+ 
Sbjct  437  DGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRND  496

Query  477  GSGDNRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYN  536
                     ++ SR   LR      + QSLG +GY+++  SR+ +R     ++S+G+ Y 
Sbjct  497  NFRAYSYS-GDRSRRTTLR------LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYG  549

Query  537  LNVGNSFWALSWVQNANEN------KNDRILSLSVSIPL----GGHHDTYASYRMTSSNG  586
             +  N  W ++W +N + N        +  ++L ++IPL    GG+++       T    
Sbjct  550  TSWKNISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTT  609

Query  587  SNDH--EIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTP  644
            +++   E G+ G+AFD RL W V +    G +++  +S+ L L W G+YG++AG Y Y++
Sbjct  610  GQNTWYETGLNGRAFDRRLYWDVSERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSS  668

Query  645  SIRQLSADVSGGAIIHRHGLTLGPQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVS  704
             IRQ+SA++SGG ++H +G+TLG + ++T  LV  PGV G +      ++TD RGY++V+
Sbjct  669  YIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVN  728

Query  705  GLSPYQEHDIVLETADLPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQ  764
             +SPYQE+ I L+ + +P + EV++TDT+V+PT GA+VRA F  ++G++AL+T++R++G 
Sbjct  729  HVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGS  788

Query  765  TIPFGAMASLVNQ----SANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLS  820
             +PFGA+ +   +    ++ A++V++ G  YL+GL ETGQL VQWG++++  CR +Y+L 
Sbjct  789  RLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-  845

Query  821  PAEKGDTGLYMLSGVC  836
            P EK  TG++++  VC
Sbjct  846  PEEKEATGIFLVRTVC  861

53) psaC in NC_003143


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  565 bits (2132),  Expect = 4e-162, Method: Compositional matrix adjust.
 Identities = 369/856 (44%), Positives = 585/856 (69%), Gaps = 36/856 (4%)

Query  6    VQFTTITL-LMSTSFLV-----GAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDI  59
             ++T+++L +M++  L+      A+ YSFD+++L +G +  D +LFE+G +LPG Y VDI
Sbjct  17   TKITAVALSVMAACTLLYTGNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDI  76

Query  60   ILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPC  119
            ILNG++VDS +++F++EK + G  +L++CLT+E L+RYGV  + YPEL  +    ++++C
Sbjct  77   ILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEAC  136

Query  120  VNLAAIPQASEEFQFYNMQLVLSIPQAALRPE--GEVPIERWDDGITAFLLNYMANISET  177
             +L+ IPQA+E +QF + QL+LSIPQ ALRP   G  P   WDDGI AFLLN  AN S +
Sbjct  137  AELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRS  196

Query  178  QFRQNGGYRRSQY-IQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKS  236
            ++R  G     +Y + L PG+NLG+WRVRN T W++S+++ G+W+SAY  A RGI  L+S
Sbjct  197  EYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRS  256

Query  237  RVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYL  296
            R+TLGE YTP+D+FDS+PFRGVMLG D +M P NQR+F PVVRGIAR+QA++E+RQNGYL
Sbjct  257  RLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYL  316

Query  297  IYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLV  356
            I S  V+PG+F L+D+  + SG+DL+V V ES+G++Q F VPY  PAIALR G ++Y++ 
Sbjct  317  IDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIA  376

Query  357  AGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATsaglggllgeygalss  416
            +G+YR+++  VE +P++Q +V YGLPW LTAF G Q S HYQ+++ GLG  +G  GA+S 
Sbjct  377  GGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSV  436

Query  417  sITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQS  476
               ++ +Q   ++   G++W +RYNK+++ ++T ++    QY+++GF TLSDVL ++R+ 
Sbjct  437  DGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRND  496

Query  477  GSGDNRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYN  536
                     ++ SR   LR      + QSLG +GY+++  SR+ +R     ++S+G+ Y 
Sbjct  497  NFRAYSYS-GDRSRRTTLR------LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYG  549

Query  537  LNVGNSFWALSWVQNANEN------KNDRILSLSVSIPL----GGHHDTYASYRMTSSNG  586
             +  N  W ++W +N + N        +  ++L ++IPL    GG+++       T    
Sbjct  550  TSWKNISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTT  609

Query  587  SNDH--EIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTP  644
            +++   E G+ G+AFD RL W V +    G +++  +S+ L L W G+YG++AG Y Y++
Sbjct  610  GQNTWYETGLNGRAFDRRLYWDVSERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSS  668

Query  645  SIRQLSADVSGGAIIHRHGLTLGPQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVS  704
             IRQ+SA++SGG ++H +G+TLG + ++T  LV  PGV G +      ++TD RGY++V+
Sbjct  669  YIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVN  728

Query  705  GLSPYQEHDIVLETADLPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQ  764
             +SPYQE+ I L+ + +P + EV++TDT+V+PT GA+VRA F  ++G++AL+T++R++G 
Sbjct  729  HVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGS  788

Query  765  TIPFGAMASLVNQ----SANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLS  820
             +PFGA+ +   +    ++ A++V++ G  YL+GL ETGQL VQWG++++  CR +Y+L 
Sbjct  789  RLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-  845

Query  821  PAEKGDTGLYMLSGVC  836
            P EK  TG++++  VC
Sbjct  846  PEEKEATGIFLVRTVC  861

54) psaC in NC_004088


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  565 bits (2132),  Expect = 4e-162, Method: Compositional matrix adjust.
 Identities = 369/856 (44%), Positives = 585/856 (69%), Gaps = 36/856 (4%)

Query  6    VQFTTITL-LMSTSFLV-----GAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDI  59
             ++T+++L +M++  L+      A+ YSFD+++L +G +  D +LFE+G +LPG Y VDI
Sbjct  17   TKITAVALSVMAACTLLYTGNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDI  76

Query  60   ILNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPC  119
            ILNG++VDS +++F++EK + G  +L++CLT+E L+RYGV  + YPEL  +    ++++C
Sbjct  77   ILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEAC  136

Query  120  VNLAAIPQASEEFQFYNMQLVLSIPQAALRPE--GEVPIERWDDGITAFLLNYMANISET  177
             +L+ IPQA+E +QF + QL+LSIPQ ALRP   G  P   WDDGI AFLLN  AN S +
Sbjct  137  AELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRS  196

Query  178  QFRQNGGYRRSQY-IQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKS  236
            ++R  G     +Y + L PG+NLG+WRVRN T W++S+++ G+W+SAY  A RGI  L+S
Sbjct  197  EYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRS  256

Query  237  RVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYL  296
            R+TLGE YTP+D+FDS+PFRGVMLG D +M P NQR+F PVVRGIAR+QA++E+RQNGYL
Sbjct  257  RLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYL  316

Query  297  IYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLV  356
            I S  V+PG+F L+D+  + SG+DL+V V ES+G++Q F VPY  PAIALR G ++Y++ 
Sbjct  317  IDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIA  376

Query  357  AGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATsaglggllgeygalss  416
            +G+YR+++  VE +P++Q +V YGLPW LTAF G Q S HYQ+++ GLG  +G  GA+S 
Sbjct  377  GGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSV  436

Query  417  sITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQS  476
               ++ +Q   ++   G++W +RYNK+++ ++T ++    QY+++GF TLSDVL ++R+ 
Sbjct  437  DGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRND  496

Query  477  GSGDNRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYN  536
                     ++ SR   LR      + QSLG +GY+++  SR+ +R     ++S+G+ Y 
Sbjct  497  NFRAYSYS-GDRSRRTTLR------LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYG  549

Query  537  LNVGNSFWALSWVQNANEN------KNDRILSLSVSIPL----GGHHDTYASYRMTSSNG  586
             +  N  W ++W +N + N        +  ++L ++IPL    GG+++       T    
Sbjct  550  TSWKNISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTT  609

Query  587  SNDH--EIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTP  644
            +++   E G+ G+AFD RL W V +    G +++  +S+ L L W G+YG++AG Y Y++
Sbjct  610  GQNTWYETGLNGRAFDRRLYWDVSERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSS  668

Query  645  SIRQLSADVSGGAIIHRHGLTLGPQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVS  704
             IRQ+SA++SGG ++H +G+TLG + ++T  LV  PGV G +      ++TD RGY++V+
Sbjct  669  YIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVN  728

Query  705  GLSPYQEHDIVLETADLPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQ  764
             +SPYQE+ I L+ + +P + EV++TDT+V+PT GA+VRA F  ++G++AL+T++R++G 
Sbjct  729  HVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGS  788

Query  765  TIPFGAMASLVNQ----SANAAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLS  820
             +PFGA+ +   +    ++ A++V++ G  YL+GL ETGQL VQWG++++  CR +Y+L 
Sbjct  789  RLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-  845

Query  821  PAEKGDTGLYMLSGVC  836
            P EK  TG++++  VC
Sbjct  846  PEEKEATGIFLVRTVC  861

55) A1122_20415 in NC_017168


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

56) YpAngola_A1531 in NC_010159


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

57) YPA_1022 in NC_008150


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

58) YPD4_1154 in NC_017154


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

59) YPN_2674 in NC_008149


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

60) YPDSF_2392 in NC_009381


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

61) YPZ3_1193 in NC_014029


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

62) YpsIP31758_2676 in NC_009708


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

63) psaC in NC_006155


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

64) YPTS_1431 in NC_010634


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  564 bits (2131),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 365/833 (44%), Positives = 572/833 (69%), Gaps = 30/833 (3%)

Query  9    AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  68
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  69   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  128
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  129  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  185
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  186  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  245
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  246  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  305
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  306  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  365
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  366  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  425
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  426  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  485
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  486  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  541
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  542  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  593
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  594  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  653
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  654  PQINGTSvlvevpgvggvtttEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEV  713
             + ++T  LV  PGV G +      ++TD RGY++V+ +SPYQE+ I L+ + +P + EV
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  714  AKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQ----SANAAI  769
            ++TDT+V+PT GA+VRA F  ++G++AL+T++R++G  +PFGA+ +   +    ++ A++
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  770  VDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVC  822
            V++ G  YL+GL ETGQL VQWG++++  CR +Y+L P EK  TG++++  VC
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL-PEEKEATGIFLVRTVC  861

65) caf1A in NC_017155


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  555 bits (2097),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 351/817 (43%), Positives = 564/817 (70%), Gaps = 26/817 (3%)

Query  5    NSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NGKELLWPCLSSLQL  63
             +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +GK  L  CL+   L
Sbjct  52   GGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREML  111

Query  64   TKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSLIVPPQALLPRFDG  119
            ++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L +P  AL P + G
Sbjct  112  ARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRG  171

Query  120  IMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLNIGAWRFRSSTSWW  178
            I P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N+G+WR R+ T+W 
Sbjct  172  IAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWN  231

Query  179  KQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGIKIASDESMVPYYQ  234
            +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+ +++DESMVPY Q
Sbjct  232  RSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQ  291

Query  235  WNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGSGELKVIIHESDGT  294
            ++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++G+L+V ++ESDGT
Sbjct  292  REFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGT  351

Query  295  KQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMKYGLPRNLTLYGGL  354
             QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ YGLP+ LT +GG 
Sbjct  352  AQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGA  411

Query  355  QGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRVRYNKYLQ-SGTSL  413
            Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+RYNK ++ + T L
Sbjct  412  QMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDL  471

Query  414  NIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNLSQSIPGSGTLNFS  472
              A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L+QS+ + G ++F 
Sbjct  472  TAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRLNQSLGSLGYMSFY  528

Query  473  GYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKTS-ELLSNIWLSFP  531
            G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++   E   N+W+++P
Sbjct  529  GSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIP  587

Query  532  LSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRERFN-EKGRKYTSN  588
            L++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV ER+      +  S+
Sbjct  588  LGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSERIAPGSENNVDSS  647

Query  589  ALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKTGDTIALVQAPDIS  648
             LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK  DT+ALV AP+++
Sbjct  648  RLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVN  707

Query  649  GASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNNIVSVIPTKGAVVL  708
            GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++    V+PTKGAVV 
Sbjct  708  GASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVR  767

Query  709  AKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGDNSGVYLTGLPKKS  764
            AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGDN+ VYL+GL   +
Sbjct  768  AKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETG  827

Query  765  KILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  801
            ++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  828  QLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

66) caf1A in NC_014022


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  555 bits (2097),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 351/817 (43%), Positives = 564/817 (70%), Gaps = 26/817 (3%)

Query  5    NSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKH-NGKELLWPCLSSLQL  63
             +G ++D++LF++G QLPG Y V++++NG +VDS ++ FR EK+ +GK  L  CL+   L
Sbjct  52   GGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREML  111

Query  64   TKYGIDIDKYPDLIKSG----TEQCVDLLAIPHSDVQFYFNQQKLSLIVPPQALLPRFDG  119
            ++YG+  + YP+L+ ++    +E C +L  IP++   + F  Q+L L +P  AL P + G
Sbjct  112  ARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRG  171

Query  120  IMPMQLWDDGIPALFMNYNTNMQTRKFREGGKSL-DSYYAQLQPGLNIGAWRFRSSTSWW  178
            I P  LWDDGIPA+++N ++N     +R  GKS+ D+Y   L+PG+N+G+WR R+ T+W 
Sbjct  172  IAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWN  231

Query  179  KQQG----WQRSYIYAERGLNTIKSRLTLGETYSDSSIFDSIPIKGIKIASDESMVPYYQ  234
            +  G    W+ +YI AERG+N+++SRLTLGE Y+ S IFDS+P++G+ +++DESMVPY Q
Sbjct  232  RSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQ  291

Query  235  WNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGSGELKVIIHESDGT  294
            ++FAPVVRGIARTQAR+EV ++GY + +  V++G+F L++LPL G++G+L+V ++ESDGT
Sbjct  292  REFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGT  351

Query  295  KQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMKYGLPRNLTLYGGL  354
             QVFTVPY TPA+ALR GY  YS+ GGEYR+++D  + S +G +++ YGLP+ LT +GG 
Sbjct  352  AQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGA  411

Query  355  QGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQKKESGQRWRVRYNKYLQ-SGTSL  413
            Q S +Y++AALG+G  +G +GA+S D  ++ +Q++ +  E+G+ WR+RYNK ++ + T L
Sbjct  412  QMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDL  471

Query  414  NIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKPKN-KVQFNLSQSIPGSGTLNFS  472
              A  +Y++ GF+ L+D L+T+ + N R    + Y+  ++ +  + L+QS+ + G ++F 
Sbjct  472  TAARYQYTSSGFHTLSDVLSTFRNDNFRA---YSYSGDRSRRTTLRLNQSLGSLGYMSFY  528

Query  473  GYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKTS-ELLSNIWLSFP  531
            G R +++++ +   SF+++Y    +N +S  +N S+  + N Y ++   E   N+W+++P
Sbjct  529  GSRDEFRHNRQKQDSFGMSYGTSWKN-ISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIP  587

Query  532  LSRWLG--NNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRERFN-EKGRKYTSN  588
            L++W+G  +N IN   Q    +  NT  E G+ G AFDR+LYWDV ER+      +  S+
Sbjct  588  LGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSERIAPGSENNVDSS  647

Query  589  ALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITAGQKTGDTIALVQAPDIS  648
             LNL   GTYGE++G YSY     Q++ G++G MV+ + GIT GQK  DT+ALV AP+++
Sbjct  648  RLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVN  707

Query  649  GASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAEITNNIVSVIPTKGAVVL  708
            GASVG  PG++TD RGYT    ++PY+EN + ++P T+P++ E+++    V+PTKGAVV 
Sbjct  708  GASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVR  767

Query  709  AKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQ----SSSSGIVGDNSGVYLTGLPKKS  764
            AKF +R+GGR ++ L RSD   +PFG++VT EG+    ++++G+VGDN+ VYL+GL   +
Sbjct  768  AKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETG  827

Query  765  KILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCI  801
            ++ V+WGR+   SC +N  LPE  + +G + + T C+
Sbjct  828  QLKVQWGRNS--SCRANYRLPEEKEATGIFLVRTVCM  862

67) PSPPH_A0064 in NC_007274


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  537 bits (2028),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 362/843 (43%), Positives = 580/843 (69%), Gaps = 31/843 (3%)

Query  7    ALSLPAAC---FFTSVQAQTYHFDPALLGSSAKHTDLSLFNRGLQQPGRYHLDVMLNDEQ  63
            ALS+ AAC   +  + +A+TY FD+++L +++K  DL+LF+ G Q PG Y +D++LN+ +
Sbjct  23   ALSVMAACTLLYTGNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSR  82

Query  64   VDSQDITLSLKKNAAGISVLDPCLSLEQLSRWGIKTEAIPGL---NRTSNAGACVILESI  120
            VDS+D+++   K+A G + L  CL+ E L+R G+ TE  P L   +   +A AC  L  I
Sbjct  83   VDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVI  142

Query  121  PESTVNADIANQQLQLQVPQSFMRPNYRGLAPQGLWDDGITAFLMNYSAGASRVDSRDIG  180
            P++T   ++A+QQL L +PQ  +RP  RG+AP++LWDDGI AFL+N  A +SR + R+ G
Sbjct  143  PQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYG  202

Query  181  ANDTSS-WAQLQPGFNLGPWRARSSFSWK----DGGDLQRSYAYVERGVRGFKSRLSLGE  235
             + T + W  L+PG+NLGPWR R+  +W+    + G+ + +Y   ERG+ +++SRL+LGE
Sbjct  203  KSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGE  262

Query  236  RTSPGDVFDGVPFTGVMLATDDTMFPASERSFAPTVSGVALTRARIEVRQNGYIIKTLSV  295
              +P+D+FD+VPF GVML++D++M P ++R FAP V G+A T+ARIEVRQNGY+I + +V
Sbjct  263  DYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTV  322

Query  296  PPGPFEIQDLAASSGNGDLHVAVYEADGRNQFFIVPWNTPAIALHKDHLKYSVTAGRYRS  355
            +PG+F + DL+ +++ GDL+V+V E+DG  Q F VP  TPAIAL+ + +KYS+++G YRS
Sbjct  323  APGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRS  382

Query  356  AESRTPEALLIQATAIYGLPWNLTGYGGLQGATHYGAASLGVGAMLGGWGAVSVDATGSR  415
            ++    ++ L Q + +YGLPW LT++GG Q ++HY +A+LG+G  +G  GAVSVD+  SR
Sbjct  383  SDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSR  442

Query  416  SQTPGGNTQGGLKWRLRYSTQLPLTHTAVSLASMQYASAGYRSLTETLGSRQREEFAIDK  475
            +Q  G +T+ G  WRLRY+  + LT+T ++ A  QY+S+G+++L++ L++ + ++F    
Sbjct  443  GQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFR-AY  501

Query  476  DYSGRRQRARSTLSLSQKLGPLGSLGISASRTDWRYGQGHDDGMGFSWSKSIHSLSVSIE  535
             YSG R R R+TL L+Q LG+LG +++ +SR + R  +  +D+ G S + S  ++S  ++
Sbjct  502  SYSGDRSR-RTTLRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVN  560

Query  536  WQQNRSFDGCQDR-----TLSVWVSIPIG---GSTNASWTLTAPTRGQQEQ----EGGLN  583
            W +N S ++  +R     ++++W++IP+G   G+ +    +T+ T+    Q    E GLN
Sbjct  561  WSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLN  620

Query  584  GRAFEDRLAWDVRQRYRTDVSSDQRSGSDLHASWNGASGQVGVGYGYSATSRQANMDVSG  643
            GRAF+ RL WDV +R  +  S ++  +S L+  W G+ G+++  Y+YS+  RQ + ++SG
Sbjct  621  GRAFDRRLYWDVSER-IAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISG  679

Query  644  GVIVHHDGVTLSQQLSDTVALVSAPGAAGVQVEGWPGVETDRRGYTVTSNLVGYQENTVS  703
            G+++H++G+TL+Q+  DTVALV APG  G  V + PGV TD RGYT+ +++  YQEN ++
Sbjct  680  GMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLIT  739

Query  704  LNPITVPDNAEIPQTDVKIVPTAGAVVEAAFRTRTGAKALVTLHYSDGSPVAFGSQVTAE  763
            L+P T P+N E++QTD ++VPT GAVV A F TR G++AL+TL  SDGS ++FG+ VT E
Sbjct  740  LDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEE  799

Query  764  GREGN----AGITDAKglayltglsssgtlsvr-sgNKMCHANYDLPGNKETAGLYQLDA  818
            G+ G+    AG+ + +G  YL+GL  +G L V+ + N  C+ANY LP +KE++G++ + +
Sbjct  800  GKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRT  859

Query  819  VCL  821
            VC+
Sbjct  860  VCM  862

68) Spro_2874 in NC_009832


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  535 bits (2020),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 342/850 (41%), Positives = 563/850 (67%), Gaps = 32/850 (3%)

Query  12   VPLAGLIVLQLVLQPTAQSRDY-FNPALLTIGTPQQDGVDLSAFENAGGQIPGVYRVDIF  70
            V+L+ +    L+    +++R Y F++++L  G     GVDL+ FE+ G+Q+PG+Y VDI+
Sbjct  22   VALSVMAACTLLYTGNTEARTYSFDASMLKGGG---KGVDLTLFEE-GAQLPGIYPVDII  77

Query  71   LNQQMVATRSVTFHADPKGDG---LQPCLSMAELGDYGVQVSRFPTL-----GAADSTCV  122
            LN   V +R ++F+++  ++G   L+ CL+   L+ YGV    +P L     G    +C 
Sbjct  78   LNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACA  137

Query  123  DLTAIPQASSRLQFNQQRLLLSIPQAAIKQQPRGYVSPAQWDEGVPALLLNYSLSGANTY  182
            +L+ IPQA+   QF  Q+LLLSIPQ A++   RG  + A WD+G+PA+LLN   + + + 
Sbjct  138  ELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSE  197

Query  183  ARNESGSNGNNQYANLRPGANLGPWRLRNYTTWGRDSDGQDKWNTVYTYAQRNLIGLQSQ  242
             R  + S  +N    L PG NLGPWR+RN TTW R S+  ++W++ Y  A+R + +L+S+
Sbjct  198  YRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSR  257

Query  243  MTLGDSNAPSEVFDAVPFRGGQLASDDDMLPDSLRGYAPIVRGIARTNAQVVVRQNGYEI  302
            +TLG+  +PS++FD+VPFRG  L++D+ M+P + R +AP+VRGIART+A++ VRQNGY I
Sbjct  258  LTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLI  317

Query  303  YRTYVAPGAFVIDDMYPTGGSGDLHVTIKEADGSEQQLVVPFASLPVLQREGRLKYSLTA  362
                VAPGAF + D+  TG++GDL+VT++E+DG+ Q + VP+++ ++  REG +KYS+++
Sbjct  318  DSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAG  377

Query  363  GQYRSYDHSVDKSALMQGTAIYGLPWNSTLYGGVQMAQRYQSAALGVGNNLGDWGAFSVD  422
            G+YRS D++V+ S+L Q + +YGLPW  T +GG QM+ +YQSAALG+G ++G  GA SVD
Sbjct  378  GEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVD  437

Query  423  VTQSRGQQKGLDRQTGQSWRMRYSKNMVQTGTNFAIAGYRYSTAGFYALSEVLDTWRSGE  482
              +SRGQQKG D +TG++WR+RY+K+   T T+++ A Y+Y+++GF +LS+VL T R+++
Sbjct  438  GIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDN  497

Query  483  MAYWAYE---RRRNRAELSMSQQLWQDGGSLSLSAIREDYWNSDRSMASLGLGYSNSWQG  539
              ++AY     R  R+ L ++Q L    G +S+ + R++++++ +   S+G++Y+ SW+ 
Sbjct  498  --FRAYSYSGDRSRRTTLRLNQSL-GSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKN  554

Query  540  ISYGVNWS--YNRNSFGPQRSNDQQIVFNLNMPLNLWDnnsswvnynlnnTKGGATSQ--  595
            IS  VNWS  Y+ N++  +   ++ I + +N+PL  W            +T+  +  +  
Sbjct  555  ISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTW  614

Query  596  -SLGLSGMALRDNSLSWAAQQNYGSRGQGYGGNLNLDYK--GTYGELSSGYGYDRNSQRL  652
               GL+G A+ D  L W   +  ++ ++   ++  L+ +  GTYGEL++ Y+Y    +++
Sbjct  615  YETGLNGRAF-DRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQM  673

Query  653  NYGLQGSVVAHASGVTLGQPLGETAALVAMPGAAGVSVNNQTGVRTDWRGYALVPYLTPY  712
            + G+ G++V H  G+TLGQ   +T ALV  PG  G SV +  GVRTD RGY+LV  ++PY
Sbjct  674  SAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPY  733

Query  713  RSTDVTLATETLSADTDVAQTSHRVVPTRGALVRATFSAKVGARALMTLTQGNGKPVPFG  772
            +   +TL   T++ + +V+QT  RVVPT+GA+VRA F ++VG+RAL+TL++++G  +PFG
Sbjct  734  QENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFG  793

Query  773  ATVSEADQN---AAQGSIVGDAGQVYLSGLAEQGKLRVLWGNGNTGQCWVNYQLPTTPQP  829
            A V+E +++   ++ +++VGD G+VYLSGL E G+L+V WG  ++  C+ NY+LP   ++
Sbjct  794  AVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRLPEEKEA  851

Query  830  GGVVQINEVC  839
             G+  +  VC
Sbjct  852  TGIFLVRTVC  861

69) myfC in NC_008800


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  533 bits (2011),  Expect = 2e-152, Method: Compositional matrix adjust.
 Identities = 338/797 (43%), Positives = 557/797 (70%), Gaps = 29/797 (3%)

Query  1    MDIFLGDEKVDSTNVTFHAVKSPTGEYSLQSCLTKEQLSRYGVDVDNYPELLPPEKNIQQ  60
            +DI+L + +VDS +++F++ K + G   L++CLT+E L+RYGV  ++YPEL+  +    +
Sbjct  74   VDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGD----D  129

Query  61   DKQASQCVNLAAIPQASEEFEFYAMRLVLNIPQVALRP--KDEIPVERWDDGITAFLLNY  118
            +K+A  C +L+ IPQA+E ++F + +L+L+IPQVALRP  ++  P   WDDGI AFLLN 
Sbjct  130  GKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNW  189

Query  119  MANSSTTTYRQTGEQRSSHY-VQLYPGFNIGAWRIRNATSWNQSGNSAGKWQSSYIYATR  177
             AN+S + YR  G   + +Y V L PG+N+G+WR+RN T+WN+S+  +G+W+S+YI A R
Sbjct  190  QANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAER  249

Query  178  GLYRLKSRVTLGQSYTPGDFFDSMPFSGVMLGDDDNMLPSRQRDFIPVVRGIARSQARVE  237
            G+  L+SR+TLG+ YTP+D+FDS+PF GVMLG D++M+P  QR+F PVVRGIAR+QAR+E
Sbjct  250  GINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIE  309

Query  238  VRQNGYLLYSTVVSPGPFKLTDMLPSHSNGDLHVTVLESNGTTQQFTVPYSVPAIALRKG  297
            VRQNGYL+ S  V+PG+F LTD+  + S GDL+VTV ES+GT+Q FTVPY+ PAIALR G
Sbjct  310  VRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREG  369

Query  298  RLRYNLMAGRYRPANVDVETTPIAQATVAYGLPWNLTAFVGGQWSPHYQATTAGMGVMLG  357
             ++Y++ +G YR+++  VE +P++Q +V YGLPW LTAF G+Q S+HYQ+++ G+G  +G
Sbjct  370  YMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMG  429

Query  358  DYGALSSSITQATSEYRQQQPVKGQVWEVRYNKTLQASDTSFSVVNSQYSTADFSNLSDV  417
              GA+S    ++ ++ + ++   G+ W +RYNK+++ ++T ++    QY++++F  LSDV
Sbjct  430  RLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDV  489

Query  418  LQSYRRHDYSRRDWHSNSLRHQIHVVVGQPLGQFGYLNLNWSRQSYRDAPAS-SSWGVRY  476
            L ++R +++      ++  R+   + + Q+LG +GY+++  SR+ +R+      S G+ Y
Sbjct  490  LSTFRNDNFRAYSYSGDRSRRTT-LRLNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSY  548

Query  477  SFNIGNLYWSLDWTQ----NQY--RGNQDRLLSLSVSMPL-----GRDHDTYAAYRMTSS  525
            + +  N+ W ++W++    N Y  RG+ +  ++L +++PL     GRD+D   + +   +
Sbjct  549  GTSWKNISWYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRT  608

Query  526  ANSKD-HELSLYGHAFDNRLSWNVRQTEHYAQFHSGENSGSLGLDWHgsygdiggdyyyT  584
            +  +   E +L G+AFD RL W+V +    +  ++  +S+ L L W G+YG+++G Y Y+
Sbjct  609  TGQNTWYETGLNGRAFDRRLYWDVSERIA-PGSENNVDSSRLNLRWFGTYGELAGMYSYS  667

Query  585  PTMRQCSANVSGGAVIHRHGLTLGPQINGTAALIEVPGVSGVSTSEDHRLKTDFRGYSIV  644
            + +RQ SA +SGG V+H +G+TLG + ++T AL+  PGV+G S +    ++TD RGY++V
Sbjct  668  SYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLV  727

Query  645  PSIFPYQEHDISLETTDLPPDAEVTNTDAKVLPTEGAIVRASFSPQIGARALMTITRNNG  704
              + PYQE+ I+L+ T +P + EV++TD++V+PT GA+VRA F  ++G+RAL+T++R++G
Sbjct  728  NHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDG  787

Query  705  ETIPFGAMASLVNQ----PANAAIVDEGGKAYLTGLPETGQLLVQWGRDASQQCRVDYQL  760
              +PFGA+ +   +    P+ A++V++ G  YL+GL ETGQL VQWGR++S  CR +Y+L
Sbjct  788  SRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRL  845

Query  761  ASAKKGDAGLYMLSGVC  777
            +  K + +G++++  VC
Sbjct  846  PEEKEA-TGIFLVRTVC  861

70) Spro_1053 in NC_009832


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  525 bits (1981),  Expect = 4e-150, Method: Compositional matrix adjust.
 Identities = 354/848 (42%), Positives = 567/848 (67%), Gaps = 31/848 (3%)

Query  11   PLRMMILTALALSPAVQARDY-FNPALLEQGDARQSQTDLSVFEDAGGQPPGTYRVDILL  69
            +L +M   +L  +   +AR Y F++++L  G+      DL++FE+ G+Q PG Y VDI+L
Sbjct  23   ALSVMAACTLLYTGNTEARTYSFDASMLKGGG---KGVDLTLFEE-GAQLPGIYPVDIIL  78

Query  70   NERLTETRMVTFSAAPDG-----LQPCLSVADLADWGVRTALFPAL-----GSADSRCAN  119
            N    ++R ++F +  D+     L+ CL+   LA  GV T  +P L     G     CA+
Sbjct  79   NGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAE  138

Query  120  LAAIPQASAQLRFSQQQLVLSIPQAAMTPQPRGYVPSSQWDEGIPALILNYSLTGADTTA  179
            L+ IPQA+   +F+ QQL+LSIPQ A+ P  RG  P + WD+GIPA++LN     + +  
Sbjct  139  LSVIPQATETYQFASQQLLLSIPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEY  198

Query  180  RGSGRGSDSNSQFANLRPGLNAGPWRLRNYTTWRRSSDGKDKWDTVYTYAQRNLIGLQSQ  239
            RG G++  +++    L PG+N GPWR+RN TTW RSS+  ++W++ Y  A+R + +L+S+
Sbjct  199  RGYGKSV-TDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSR  257

Query  240  LTLGDSNAPAEVFDAVPFRGVQLASDDEMLPDSLRGYAPVVRGIARTNAQVVVRQNGYEI  299
            LTLG+  +P+++FD+VPFRGV L++D+ M+P + R +APVVRGIART+A++ VRQNGY I
Sbjct  258  LTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLI  317

Query  300  YRTFVAPGAFVINDMYPTGGSGDLQVTIKEADGSEQQLVVPFASLPVLQREGRLKYSLTG  359
                VAPGAF + D+  TG++GDLQVT++E+DG+ Q + VP+++ ++  REG +KYS++G
Sbjct  318  DSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAG  377

Query  360  GQYRSYDRSVDKSALVQGTAIYGLPWNTTLYGGVQAAQHYQSAALGLGNNLGEWGAFSVD  419
            G+YRS D +V+ S+L Q + +YGLPW  T +GG Q + HYQSAALGLG ++G  GA SVD
Sbjct  378  GEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVD  437

Query  420  MTQSRSQPKDQDSATGQSWRVRYSKNLVQTGTNFAIAGYRYSTAGFYSLAEVLDGWRSSS  479
              +SR+Q K++D+ TG++WR+RY+K++  T T+++ A Y+Y+++GF +L++VL   R+ +
Sbjct  438  GIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDN  497

Query  480  -TPFWQNERRRNRAELSMNQQLGPQAGSLSLSAVREDYWNSERSLASLGLGYSNSWRGIS  538
              ++  +  R  R+ L +NQ LG+  G +S+ + R++++++ +   S+G++Y+ SW+ IS
Sbjct  498  FRAYSYSGDRSRRTTLRLNQSLGSL-GYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNIS  556

Query  539  YGVNWS--YNRNTQGATRSNDQQIALNLNVPLNLW---DNNNAWVNYGLNSTKGGATSHN  593
              VNWS  Y+ N+       ++ I L +N+PL  W    +N+  V    + T G  T  +
Sbjct  557  WYVNWSRNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYE  616

Query  594  LGLSGVALRDNSLSWGVQQTYGSRGQGYGGNSNLDYR--GTYGEVTAGYGYDKDSRRLNY  651
             GL+G A+ D  L W+V +  ++ ++   ++S L+ R  GTYGE+++ Y+Y    R+++ 
Sbjct  617  TGLNGRAF-DRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSA  675

Query  652  GLQGSVVAHQNGITLGQPLGETaalvaapgapgvsvsNQTGVRTDYRGYALVPYLTPYRN  711
            G+ G++V H++GITLGQ   +T ALV APG  G SV++  GVRTD RGY+LV  ++PY++
Sbjct  676  GISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQE  735

Query  712  GNVALNPETLPTDAEIEQNSQRVTPTRGALVRATFTAKVGARVLMTLTQADGRPVPFGAT  771
              ++L+P T+P + E+ Q   RV PT+GA+VRA F ++VG+R L+TL+++DG  +PFGA 
Sbjct  736  NLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAV  795

Query  772  VSE---TDQNAAQGSIVGDSGQVYLSGLADSGSLRVKWGNGSGGECRVNYRLPTGAPVGG  828
            V+E    +Q ++ +++VGD+G+VYLSGL ++G L+V+WG  S+  CR NYRLP      G
Sbjct  796  VTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRLPEEKEATG  853

Query  829  IMQIEGIC  836
            I  +  +C
Sbjct  854  IFLVRTVC  861

71) ECENHK_08570 in NC_018405


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  503 bits (1897),  Expect = 2e-143, Method: Compositional matrix adjust.
 Identities = 346/861 (41%), Positives = 579/861 (68%), Gaps = 35/861 (4%)

Query  6    KNKISPTRLACFIALQCTFSLSHPACAREY-FNPALLGIDGPGKDISDLSAFEEGVGQMP  64
            K KI++  L+  +   CT+  +  + AR Y F++++L   G GK++ DL+ FEEG +Q+P
Sbjct  16   KTKITAVALS--VMAACTLLYTGNTEARTYSFDASML--KGGGKGV-DLTLFEEG-AQLP  69

Query  65   GTYRVDVLVNQTLTGTHDIEFSMQKDSHGQTSLQPCISVEMLRDFGVRTEQFPQL-----  119
            G Y VD+++N +  +++D+ F  +KD++G+T L+ C++ EML  +GV TE++P+L     
Sbjct  70   GIYPVDIILNGSRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDD  129

Query  120  -TGENHCANLAAIPNAATQFVFNKQQLLLSIPQAAMNNQARGYVAPERL-DEGINALLLN  177
                + CA+L+ IP+A+  + F  QQLLLSIPQ A+    RG +APE L D+GI A+LLN
Sbjct  130  GKEAEACAELSVIPQATETYQFASQQLLLSIPQVALRPPLRG-IAPEALWDDGIPAFLLN  188

Query  178  YSFTGGNTQARHSDMTDSDSYYLNLRPGLNIGPWRVRNYSTWSRNTSGNSTQNNWDSAYT  237
                 + ++ R  + + +D+Y + L PG+N+GPWRVRN +TW+R+++      +W+SAY 
Sbjct  189  WQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSG---QPGQWESAYI  245

Query  238  YAQRNIIALKSQLTLGESNSPSDLFDSVPFRGAQLASDDDMLPDSLRGYAPVVRGIARTN  297
             A+R I +L+S+LTLGE  +PSD+FDSVPFRG  L++D+ M+P + R +APVVRGIART+
Sbjct  246  RAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQ  305

Query  298  AQVIIKQNGYTIYQSYVSPGAFEITDMYPTGSSGDLDVTIKEADGSEQHQLVPFASLPVL  357
            A++ ++QNGY I    V+PGAF +TD+  TGS+GDL+VT++E+DG+ Q   VP+++ ++ 
Sbjct  306  ARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIA  365

Query  358  QREGRLKYSLTSGQYRPYDSAVDKTFFTQGSAIYGLPAGFTAYGGGQLSQHYQSLLVGIG  417
             REG +KYS+++G+YR+ D AV+ + + Q S +YGLP G+TA+GG+Q+S HYQS  +G+G
Sbjct  366  LREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLG  425

Query  418  KNFGGLGAVSVDGTQAWSTQQDQEKAIGQSMRVRYSKNILETGTNIAIsgyrystsgyyt  477
             + G LGAVSVDG ++++ Q++++   G++ R+RY+K++  T T+++ + Y+Y++SG+ T
Sbjct  426  WSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHT  485

Query  478  LQEVLDTWRDSNWQ--DNTERRRNRAEILLNQNLWEGAGSISLNAISEDYWNSDRTMRSI  535
            L +VL T R+ N +    +  R  R+ + LNQ+L  + G +S+ +  ++++++ +   S+
Sbjct  486  LSDVLSTFRNDNFRAYSYSGDRSRRTTLRLNQSL-GSLGYMSFYGSRDEFRHNRQKQDSF  544

Query  536  GAGYSNSWNGITWSLNYSFNRNTTDARDSDTVYSEDQVFSMSISVPLDRWLSSSRATYNL  595
            G +Y+ SW+ I+W +N S N +T    + + +   ++ +++ +++PL++W+++     N+
Sbjct  545  GMSYGTSWKNISWYVNWSRNYSTNAYYQRGHI---EDSINLWMNIPLGQWIGGRDNDINV  601

Query  596  NTSKHGSTSHT----VGLNGTALQDQNLNWSVQESETNHDGGNGGSASLDYQ--GTYARM  649
             T  + +T++      GLNG A+ D+ L W V E  +     N +S+ L+ +  GTY+ +
Sbjct  602  TTQTQRTTGQNTWYETGLNGRAF-DRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGEL  660

Query  650  NSAYSYDHDQRRVNYGISGGVVAHANGITLSQELGETVALVEAPGASGVDITNQTGVSTD  709
             + YSY    R+++ GISGG+V H +GITL+Q   +TVALV APG +G  + +  GV TD
Sbjct  661  AGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTD  720

Query  710  FRGYTVVPFISPYRENTLSLNTEQLPDDADVELSAKTVTPTRGAIVRAHFDTRVGKRVLM  769
             RGYT+V  +SPY+EN ++L+   +P++ +V  +   V PT+GA+VRA F TRVG R L+
Sbjct  721  TRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALI  780

Query  770  TLTRRDGRPVPFGAIVTDDKN----AKTTSIVGDGGQVYLAGMSLQGSATVKWGANKQCH  825
            TL+R DG  +PFGA+VT++ +    +  +++VGD G+VYL+G+   G   V+WG N  C+
Sbjct  781  TLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCR  840

Query  826  TRWQLPESTSSSAIVEVNASC  846
            +  +LPE   +++I  V + C
Sbjct  841  ANYRLPEEKEATGIFLVRTVC  861

72) A225_4163 in NC_018106


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  496 bits (1871),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 341/832 (41%), Positives = 557/832 (67%), Gaps = 32/832 (3%)

Query  34   FNPALLEMDGPHTGVRDLSAYEQAGGQLPGTYRVDIYLNNVFMDTRDVVFQQSKGP-GIT  92
            F++++L   G   GV DL+ +E+ G+QLPG Y VDI LN   +D+RD+ F+  K++ G T
Sbjct  45   FDASML--KGGGKGV-DLTLFEE-GAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKT  100

Query  93   ELQPCLTVDDLAEWGVRVSQFPEL-----GRRTPGCADISVIPQAKSDFRFSQQRLLLSF  147
             L+ CLT + LA  GV   ++PEL     G+ + +CA++SVIPQA   ++F+ Q+LLLS+
Sbjct  101  YLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLSI  160

Query  148  PQAAVASAARGWVDPKQWDEGVPAILLNYSFSGANNWSRQNDAPDSDNQYVNLRPGINVG  207
            PQ A+ ++ RG      WD+G+PA+LLN   + + +  R  + + +DN  V L PGIN+G
Sbjct  161  PQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLG  220

Query  208  PWRLRNYTTWsrsssggessnsWDTVYTYAQRNIKSIQGVMTLGDSSTDADVFEGVPFRG  267
            PWR+RN TTW+RSS+       W++ Y  A+R I+S+++ +TLG+  T +D+F++VPFRG
Sbjct  221  PWRVRNLTTWNRSSGQPGQ---WESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRG  277

Query  268  AMLASDDDMLPESLRGYAPVVRGIARTNAQVIIRQNGYEIYQTYVAPGAFEITDMYPTGG  327
             ML++D+ M+P + R +APVVRGIART+A++ +RQNGY I    VAPGAF +TD+  TG+
Sbjct  278  VMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGS  337

Query  328  SGDLAVTIKEADGSEQNLIVPYASLPVLQREGRLKYSVTSGVYRAYDNSIDETPLTQATA  387
            +GDL VT++E+DG+ Q + VPY++ ++  REG +KYS+++G YR+ D++++++PL Q + 
Sbjct  338  GGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSV  397

Query  388  IYGLPWGLTLYGGGQFSSKYQSVALGMGKNLGELGAVSTDIIQAWSTRQDKDKESGQSVR  447
            +YGLPWGLT +GG+Q SS YQS ALG+G ++G LGAVS D I++++ ++++D E+G++ R
Sbjct  398  MYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWR  457

Query  448  LRYSKDLPGLGTNVSLAGYRYATSGYWDMQEVLDTYRDDNYTP---SIERRRNRGEVTIs  504
            LRY+K +    T+++ A Y+Y++SG+  + +VL T+R+DN+ +   S +R R     T+ 
Sbjct  458  LRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGDRSRR---TTLR  514

Query  505  qslgeemgslslsY-IREDYWNTSRTMESVGVGYNNSWRGISYSMNYSYNRNTTDQNTGK  563
             + +    +    Y  R+++++  +  +S G++Y  SW+ IS  +N S  RN + +   +
Sbjct  515  LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWS--RNYSTNAYYQ  572

Query  564  RNDEDHLFALSISVPLGEWLP---KPVYANYSLNSSKNGSTSNNLGLSGTLLERNNLSWS  620
            R + ++ + L +++PLG+W+    + +      + +   +T  + GL+G  ++R  L W 
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDR-RLYWD  631

Query  621  VQEGYT--SQGRGESGSVNADWRATYAELTGGYSHDKYSHRLNYALRGGALVHENGLTLG  678
            V E  +  S+   +S+ +N  W +TY+EL+G YS   Y ++++ ++ GG ++H++G+TLG
Sbjct  632  VSERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  679  QPFGETVALIKAPGAAGVGVNSQTGVRTDWRGYTVVPYASPYRKNILTLDTTTMPDDVDL  738
            Q   +TVAL+ APG  G +V S  GVRTD RGYT+V   SPY+ N++TLD TT P++V++
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  739  ELATQTVVPTRGAVVRANYATSVGNRVLMTVRQENGQPLPFGAMVSVPG--AASSEQAFI  796
              +   VVPT+GAVVRA++ T VG R L+T+ + +G  LPFGA+V+  G  +  +  A +
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  797  VGDGGQVYLTGLESNGVLNVKWGSGAQERCQIHYALPSAKELTGIIVAQAQC  848
            VGD G+VYL+GL+  G L+V+WG  +   C+ +Y LP  KE TGI++ ++ C
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRLPEEKEATGIFLVRTVC  861

73) KOX_26315 in NC_016612


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  496 bits (1871),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 341/832 (41%), Positives = 557/832 (67%), Gaps = 32/832 (3%)

Query  34   FNPALLEMDGPHTGVRDLSAYEQAGGQLPGTYRVDIYLNNVFMDTRDVVFQQSKGP-GIT  92
            F++++L   G   GV DL+ +E+ G+QLPG Y VDI LN   +D+RD+ F+  K++ G T
Sbjct  45   FDASML--KGGGKGV-DLTLFEE-GAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKT  100

Query  93   ELQPCLTVDDLAEWGVRVSQFPEL-----GRRTPGCADISVIPQAKSDFRFSQQRLLLSF  147
             L+ CLT + LA  GV   ++PEL     G+ + +CA++SVIPQA   ++F+ Q+LLLS+
Sbjct  101  YLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLSI  160

Query  148  PQAAVASAARGWVDPKQWDEGVPAILLNYSFSGANNWSRQNDAPDSDNQYVNLRPGINVG  207
            PQ A+ ++ RG      WD+G+PA+LLN   + + +  R  + + +DN  V L PGIN+G
Sbjct  161  PQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLG  220

Query  208  PWRLRNYTTWsrsssggessnsWDTVYTYAQRNIKSIQGVMTLGDSSTDADVFEGVPFRG  267
            PWR+RN TTW+RSS+       W++ Y  A+R I+S+++ +TLG+  T +D+F++VPFRG
Sbjct  221  PWRVRNLTTWNRSSGQPGQ---WESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRG  277

Query  268  AMLASDDDMLPESLRGYAPVVRGIARTNAQVIIRQNGYEIYQTYVAPGAFEITDMYPTGG  327
             ML++D+ M+P + R +APVVRGIART+A++ +RQNGY I    VAPGAF +TD+  TG+
Sbjct  278  VMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGS  337

Query  328  SGDLAVTIKEADGSEQNLIVPYASLPVLQREGRLKYSVTSGVYRAYDNSIDETPLTQATA  387
            +GDL VT++E+DG+ Q + VPY++ ++  REG +KYS+++G YR+ D++++++PL Q + 
Sbjct  338  GGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSV  397

Query  388  IYGLPWGLTLYGGGQFSSKYQSVALGMGKNLGELGAVSTDIIQAWSTRQDKDKESGQSVR  447
            +YGLPWGLT +GG+Q SS YQS ALG+G ++G LGAVS D I++++ ++++D E+G++ R
Sbjct  398  MYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWR  457

Query  448  LRYSKDLPGLGTNVSLAGYRYATSGYWDMQEVLDTYRDDNYTP---SIERRRNRGEVTIs  504
            LRY+K +    T+++ A Y+Y++SG+  + +VL T+R+DN+ +   S +R R     T+ 
Sbjct  458  LRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGDRSRR---TTLR  514

Query  505  qslgeemgslslsY-IREDYWNTSRTMESVGVGYNNSWRGISYSMNYSYNRNTTDQNTGK  563
             + +    +    Y  R+++++  +  +S G++Y  SW+ IS  +N S  RN + +   +
Sbjct  515  LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWS--RNYSTNAYYQ  572

Query  564  RNDEDHLFALSISVPLGEWLP---KPVYANYSLNSSKNGSTSNNLGLSGTLLERNNLSWS  620
            R + ++ + L +++PLG+W+    + +      + +   +T  + GL+G  ++R  L W 
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDR-RLYWD  631

Query  621  VQEGYT--SQGRGESGSVNADWRATYAELTGGYSHDKYSHRLNYALRGGALVHENGLTLG  678
            V E  +  S+   +S+ +N  W +TY+EL+G YS   Y ++++ ++ GG ++H++G+TLG
Sbjct  632  VSERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  679  QPFGETVALIKAPGAAGVGVNSQTGVRTDWRGYTVVPYASPYRKNILTLDTTTMPDDVDL  738
            Q   +TVAL+ APG  G +V S  GVRTD RGYT+V   SPY+ N++TLD TT P++V++
Sbjct  692  QKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEV  751

Query  739  ELATQTVVPTRGAVVRANYATSVGNRVLMTVRQENGQPLPFGAMVSVPG--AASSEQAFI  796
              +   VVPT+GAVVRA++ T VG R L+T+ + +G  LPFGA+V+  G  +  +  A +
Sbjct  752  SQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGV  811

Query  797  VGDGGQVYLTGLESNGVLNVKWGSGAQERCQIHYALPSAKELTGIIVAQAQC  848
            VGD G+VYL+GL+  G L+V+WG  +   C+ +Y LP  KE TGI++ ++ C
Sbjct  812  VGDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRLPEEKEATGIFLVRTVC  861

74) CFSAN001992_05635 in NC_020307


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  495 bits (1866),  Expect = 4e-141, Method: Compositional matrix adjust.
 Identities = 346/849 (41%), Positives = 575/849 (68%), Gaps = 38/849 (4%)

Query  23   CALPAGNTAFAREY-FNPALLGIDGPGKELTDLSAFEEGIGQMPGTYRVDVIVNKSSAGV  81
            C+L     + AR Y F++++L   G GK + DL+ FEEG +Q+PG Y VD+I+N S  + 
Sbjct  30   CTLLYTGNTEARTYSFDASML--KGGGKGV-DLTLFEEG-AQLPGIYPVDIILNGSRVDS  85

Query  82   HDVNFVMQKDTAGNTTLQPCFSVDSLREFGIRTDAFPNLAGHGD-------CANLAAIPQ  134
            +D+ F  +KD+ G+T L+ C++ + L  +G+ T+ +P+L  HGD       CA+L+ IPQ
Sbjct  86   RDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELF-HGDDGKEAEACAELSVIPQ  144

Query  135  ASAEFAFERQQLRLSIPQAAVDSHARGYVAPERL-DEGINALLLNYSFSGANTEARRGDM  193
            A+  + F  QQL LSIPQ A+ +  RG +APE L D+GI A+LLN   + + +E R  + 
Sbjct  145  ATETYQFASQQLLLSIPQVALRPPLRG-IAPEALWDDGIPAFLLNWQANTSRSEYRGYGK  203

Query  194  TDSDSYYLSLRPGLNIGPWRIRNYSTWNRNVNGDSADESWDSLYTYAQRNIIALKSQLTF  253
            + +D+Y ++L PG+N+GPWR+RN +TWNR+ +G++++  W+S Y  A+R I +L+S+LT+
Sbjct  204  SVTDNYWVTLEPGINLGPWRVRNLTTWNRS-SGQPGQ--WESAYIRAERGINSLRSRLTL  260

Query  254  GDSTAPSELFDSVPFRGAQLASDDDMLPDSLRGYAPVVRGIARTNAQVIIKQNGYTIYQS  313
            G+  +PS++FDSVPFRG  L++D+ M+P + R +APVVRGIART+A++ ++QNGY I   
Sbjct  261  GEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSR  320

Query  314  YVSPGAFEITDMYPTGSSGDLDVTIKEADGSEQHQTVAFASLPILQREGRLKYSVTSGQY  373
             V+PGAF +TD+  TGS+GDL+VT++E+DG+ Q  TV++++ +I  REG +KYS+++G+Y
Sbjct  321  TVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEY  380

Query  374  RPYESDIDKKMFTQATLIYGLPAGFTVYGGGQFSQHYKSLLTGLGKNLGELGAVSVDGTQ  433
            R+ +  ++   + Q +++YGLP G+T +GG+Q S HY+S   GLG ++G LGAVSVDG +
Sbjct  381  RSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIH  440

Query  434  AWSTQKDQDKESGQSWRIRYSKNILETGTNisisgyrystsgyytLPEVLDTWRDDESQN  493
            +++ QK++D E+G++WR+RY+K++  T T+++ + Y+Y++SG+ TL++VL T R+D+ + 
Sbjct  441  SRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA  500

Query  494  ---NNDRRRNRAELQLNQSIGASLGSLSLNAISEDYWNSDRKMRSLGVGYSNSWGGVTYN  550
               + DR R R+ L+LNQS+G SLG +S+ +  ++++++ +K  S+G++Y+ SW  ++  
Sbjct  501  YSYSGDRSR-RTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWY  558

Query  551  INYSYNRNttdsddsdKIYDEDQVFSLSINIPLDRWLSHSYATYNLNTSKRGNTNHT---  607
            +N S  RN + +   ++   ED + +L +NIPL++W++      N+ T  +  T +    
Sbjct  559  VNWS--RNYSTNAYYQRGHIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWY  615

Query  608  -VGLNGSALEDNNLNWSLQQSETNHGEGNGGYASLDYQ--GAYARMNGAYSYDNDQKRVN  664
              GLNG A+ D  L W + +  +  +E N + + L+ +  G+Y+ + G YSY +  ++++
Sbjct  616  ETGLNGRAF-DRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMS  674

Query  665  YGMEGGIVAHAHGVTLSQSLGETSALVEAPGANGVTISNQTGVKTDFRGYTVVPYVTPYR  724
             G+ GG+V H +G+TL+Q   +T ALV APG NG ++++  GV+TD RGYT+V  V+PY+
Sbjct  675  AGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQ  734

Query  725  ETAVSLDTETLPDGADVDLTSQMITPTRGAIVRAHFDTRIGKRVLMNLSRTPTEIVPFGA  784
            E  ++LD  T+P+  +V  T   + PT+GA+VRA F TR+G R L+ LSR+    +PFGA
Sbjct  735  ENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGA  794

Query  785  LATIEGQPADK---SFIVGDHGQVYLTGAPERGTLKVTWGRTANDTCHVTFNLTELNATD  841
            + T EG+ ++    + +VGD+G+VYL+G  E G LKV WGR  N +C+  + L E + + 
Sbjct  795  VVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGR--NSSCRANYRLPEEKEAT  852

Query  842  GVMETQESC  850
            G+   +  C
Sbjct  853  GIFLVRTVC  861

75) SeSA_A1271 in NC_011094


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  495 bits (1866),  Expect = 4e-141, Method: Compositional matrix adjust.
 Identities = 346/849 (41%), Positives = 575/849 (68%), Gaps = 38/849 (4%)

Query  23   CALPAGNTAFAREY-FNPALLGIDGPGKELTDLSAFEEGIGQMPGTYRVDVIVNKSSAGV  81
            C+L     + AR Y F++++L   G GK + DL+ FEEG +Q+PG Y VD+I+N S  + 
Sbjct  30   CTLLYTGNTEARTYSFDASML--KGGGKGV-DLTLFEEG-AQLPGIYPVDIILNGSRVDS  85

Query  82   HDVNFVMQKDTAGNTTLQPCFSVDSLREFGIRTDAFPNLAGHGD-------CANLAAIPQ  134
            +D+ F  +KD+ G+T L+ C++ + L  +G+ T+ +P+L  HGD       CA+L+ IPQ
Sbjct  86   RDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELF-HGDDGKEAEACAELSVIPQ  144

Query  135  ASAEFAFERQQLRLSIPQAAVDSHARGYVAPERL-DEGINALLLNYSFSGANTEARRGDM  193
            A+  + F  QQL LSIPQ A+ +  RG +APE L D+GI A+LLN   + + +E R  + 
Sbjct  145  ATETYQFASQQLLLSIPQVALRPPLRG-IAPEALWDDGIPAFLLNWQANTSRSEYRGYGK  203

Query  194  TDSDSYYLSLRPGLNIGPWRIRNYSTWNRNVNGDSADESWDSLYTYAQRNIIALKSQLTF  253
            + +D+Y ++L PG+N+GPWR+RN +TWNR+ +G++++  W+S Y  A+R I +L+S+LT+
Sbjct  204  SVTDNYWVTLEPGINLGPWRVRNLTTWNRS-SGQPGQ--WESAYIRAERGINSLRSRLTL  260

Query  254  GDSTAPSELFDSVPFRGAQLASDDDMLPDSLRGYAPVVRGIARTNAQVIIKQNGYTIYQS  313
            G+  +PS++FDSVPFRG  L++D+ M+P + R +APVVRGIART+A++ ++QNGY I   
Sbjct  261  GEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSR  320

Query  314  YVSPGAFEITDMYPTGSSGDLDVTIKEADGSEQHQTVAFASLPILQREGRLKYSVTSGQY  373
             V+PGAF +TD+  TGS+GDL+VT++E+DG+ Q  TV++++ +I  REG +KYS+++G+Y
Sbjct  321  TVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEY  380

Query  374  RPYESDIDKKMFTQATLIYGLPAGFTVYGGGQFSQHYKSLLTGLGKNLGELGAVSVDGTQ  433
            R+ +  ++   + Q +++YGLP G+T +GG+Q S HY+S   GLG ++G LGAVSVDG +
Sbjct  381  RSSDDAVEHSPLGQMSVMYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIH  440

Query  434  AWSTQKDQDKESGQSWRIRYSKNILETGTNisisgyrystsgyytLPEVLDTWRDDESQN  493
            +++ QK++D E+G++WR+RY+K++  T T+++ + Y+Y++SG+ TL++VL T R+D+ + 
Sbjct  441  SRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRA  500

Query  494  ---NNDRRRNRAELQLNQSIGASLGSLSLNAISEDYWNSDRKMRSLGVGYSNSWGGVTYN  550
               + DR R R+ L+LNQS+G SLG +S+ +  ++++++ +K  S+G++Y+ SW  ++  
Sbjct  501  YSYSGDRSR-RTTLRLNQSLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWY  558

Query  551  INYSYNRNttdsddsdKIYDEDQVFSLSINIPLDRWLSHSYATYNLNTSKRGNTNHT---  607
            +N S  RN + +   ++   ED + +L +NIPL++W++      N+ T  +  T +    
Sbjct  559  VNWS--RNYSTNAYYQRGHIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWY  615

Query  608  -VGLNGSALEDNNLNWSLQQSETNHGEGNGGYASLDYQ--GAYARMNGAYSYDNDQKRVN  664
              GLNG A+ D  L W + +  +  +E N + + L+ +  G+Y+ + G YSY +  ++++
Sbjct  616  ETGLNGRAF-DRRLYWDVSERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMS  674

Query  665  YGMEGGIVAHAHGVTLSQSLGETSALVEAPGANGVTISNQTGVKTDFRGYTVVPYVTPYR  724
             G+ GG+V H +G+TL+Q   +T ALV APG NG ++++  GV+TD RGYT+V  V+PY+
Sbjct  675  AGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQ  734

Query  725  ETAVSLDTETLPDGADVDLTSQMITPTRGAIVRAHFDTRIGKRVLMNLSRTPTEIVPFGA  784
            E  ++LD  T+P+  +V  T   + PT+GA+VRA F TR+G R L+ LSR+    +PFGA
Sbjct  735  ENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGA  794

Query  785  LATIEGQPADK---SFIVGDHGQVYLTGAPERGTLKVTWGRTANDTCHVTFNLTELNATD  841
            + T EG+ ++    + +VGD+G+VYL+G  E G LKV WGR  N +C+  + L E + + 
Sbjct  795  VVTEEGKKGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGR--NSSCRANYRLPEEKEAT  852

Query  842  GVMETQESC  850
            G+   +  C
Sbjct  853  GIFLVRTVC  861

76) psaC in NC_017160


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  457 bits (1721),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 299/675 (45%), Positives = 459/675 (68%), Gaps = 23/675 (3%)

Query  23   AQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPSGE  82
            A+ YSFD+++L +G +  D +LFE+G +LPG Y VDIILNG++VDS +++F++EK + G 
Sbjct  40   ARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGK  99

Query  83   PFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLS  142
             +L++CLT+E L+RYGV  + YPEL  +    ++++C +L+ IPQA+E +QF + QL+LS
Sbjct  100  TYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLS  159

Query  143  IPQAALRPE--GEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQY-IQLYPGLNL  199
            IPQ ALRP   G  P   WDDGI AFLLN  AN S +++R  G     +Y + L PG+NL
Sbjct  160  IPQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINL  219

Query  200  GAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVM  259
            G+WRVRN T W++S+++ G+W+SAY  A RGI  L+SR+TLGE YTP+D+FDS+PFRGVM
Sbjct  220  GPWRVRNLTTWNRSSGQPGQWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVM  279

Query  260  LGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGS  319
            LG D +M P NQR+F PVVRGIAR+QA++E+RQNGYLI S  V+PG+F L+D+  + SG+
Sbjct  280  LGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGSGG  339

Query  320  DLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAY  379
            DL+V V ES+G++Q F VPY  PAIALR G ++Y++ +G+YR+++  VE +P++Q +V Y
Sbjct  340  DLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMY  399

Query  380  GLPWNLTAFIGEQWSRHYQATsaglggllgeygalsssITQATSQYHHQQPVKGQAWEVR  439
            GLPW LTAF G Q S HYQ+++ GLG  +G  GA+S    ++ +Q   ++   G++W +R
Sbjct  400  GLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLR  459

Query  440  YNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQIS  499
            YNK+++ ++T ++    QY+++GF TLSDVL ++R+          ++ SR   LR    
Sbjct  460  YNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYS-GDRSRRTTLR----  514

Query  500  AVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANEN----  555
              + QSLG +GY+++  SR+ +R     ++S+G+ Y  +  N  W ++W +N + N    
Sbjct  515  --LNQSLGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWSRNYSTNAYYQ  572

Query  556  --KNDRILSLSVSIPL----GGHHDTYASYRMTSSNGSNDH--EIGMYGQAFDSRLSWSV  607
                +  ++L ++IPL    GG+++       T    +++   E G+ G+AFD RL W V
Sbjct  573  RGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDV  632

Query  608  RQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTLG  667
             +    G +++  +S+ L L W G+YG++AG Y Y++ IRQ+SA++SGG ++H +G+TLG
Sbjct  633  SERIAPG-SENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLG  691

Query  668  PQINGTSVLVEVPGV  682
             + ++T  LV  PGV
Sbjct  692  QKGEDTVALVVAPGV  706

77) CSSP291_12035 in NC_020260


> GQ497943|49|G49|291291772|ADD91743.1|Escherichia_coli_AL862|+|52470..55058|afaC|-|putative 
AfaC-VIII usher protein
Length=862

 Score =  450 bits (1694),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 333/832 (41%), Positives = 535/832 (65%), Gaps = 34/832 (4%)

Query  9    FNPALLDIDNPSQGKTDLTLYEKGPGAAPGKYRVDIYINNERIDTREIEFTLKTASDGSS  68
            F++++L  +  +    DLTL+E G+   PG Y VDI +N  R+D+R++ F     ++G +
Sbjct  45   FDASMLKGGGKG---VDLTLFEEGA-QLPGIYPVDIILNGSRVDSRDMAFRTEKDAEGKT  100

Query  69   TLQPCFTLEDLKSLGVKTDEFDAL--DADAK----CVDLSAIPSASARFDVGRqqlqlsi  122
             L+ C+T E L   GV T+E+  L  + D+K    C +LS IP A+  ++ + QQL LSI
Sbjct  101  YLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLSI  160

Query  123  aqsalgqVPQGYIPPEEFNEGINALLFNYSVNGSRQKALTPDAQDSRNLYANLRPGINLG  182
            +Q AL    +G  P    ++GI A+L+N   N SR      +   + N    L PGINLG
Sbjct  161  PQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLG  220

Query  183  PWRLRNYSTWSRNADHSGTQEKFSSVYTYAERDIVALKSELTLGQSSSPADVFDSIPFTG  242
            PWR+RN +TW+R+++++G   +  S Y  AER+I +L+S LTLG+  +P+D+FDS+PF G
Sbjct  221  PWRVRNLTTWNRSSGQPG---QWESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRG  277

Query  243  AQLASDDDMLPDSLRGYAPVVHGIARSNAQVIIRQNGYLISQTNVAPGAFEINDLYPSGS  302
              L++D+ M+P + R +APVV+GIAR++A++ +RQNGYLI    VAPGAF + DL  +GS
Sbjct  278  VMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSRTVAPGAFALTDLPLTGS  337

Query  303  SGDLNVTVKESDGSEQHFVVPYASVPVLQREGRLKYSLTGGRYRSYDESVLSTAFMQGTA  362
            +GDL+VTV+ESDG+ Q F VPY++ ++  REG +KYS++GG YRS D++V  +++ Q + 
Sbjct  338  GGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSV  397

Query  363  VYGLPHGFTLYGGIQASQPYHSLALGVGENVGDFGAFSLDVTEAKATLSSGETQKGRSWR  422
            +YGLP G+T +GG Q S  Y+S ALG+G ++G +GA S+D  ++++   + +T+ G +WR
Sbjct  398  MYGLPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWR  457

Query  423  ARYSKDIALTGATLSVAGYRFSSENYYAMQDVFDTMRRDNQWADTL--HRRSREELTLEQ  480
             RY+K + LT + L+ A Y+++S  + ++ DV+ T R DN +A +   +R  R  L L+Q
Sbjct  458  LRYNKSFELTNTDLTAARYQYTSSGFHTLSDVLSTFRNDNFRAYSYSGDRSRRTTLRLNQ  517

Query  481  PLGDALGSLNASLIQENYWNSSKTMSSLSVGYNNSWHDISYGLNYSLNRNTSENGYGEPE  540
            +LG +LG ++    +++++++ +   S++++Y  SW +IS  +N S  RN S N+Y +  
Sbjct  518  SLG-SLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVNWS--RNYSTNAYYQRG  574

Query  541  HEKDSVFSLTLSIPLERWLPNTWASYNQSHSKQGTTQ-----NIGLNGTALSDNNLNWNI  595
            H  DS+ +L ++IPL +W+       N +   Q TT      + GLNG A+ D  L W++
Sbjct  575  HIEDSI-NLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAF-DRRLYWDV  632

Query  596  QQ--SQDSQGQMRNTSLNADYKGAYGELSAGYGQDFSQRQIHYGIQGGLIAHANGITLGQ  653
             +  + +S+ ++ ++ LN    G+YGEL++ Y+     RQ+  GI GG++ H +GITLGQ
Sbjct  633  SERIAPGSENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQ  692

Query  654  PMGETVALVEAPGANDTAIHNQTGVRTDGRGYTILPFISPYRRNTVALDTETLPADADVT  713
               +TVALV APG N++++ +  GVRTD RGYT++  +SPY+ N ++LD  T+P + +V+
Sbjct  693  KGEDTVALVVAPGVNGASVGSLPGVRTDTRGYTLVNHVSPYQENLITLDPTTFPENVEVS  752

Query  714  QAVQTVTPTRGAVVRARFDTRTGARVLMTLHLADGRPVPFGatataddtaEEF-----IV  768
            Q+   V PT+GAVVRA+F TR G+R L+TL  +DG  +PFGA  T ++   +      +V
Sbjct  753  QTDTRVVPTKGAVVRAKFITRVGGRALITLSRSDGSRLPFGAVVTEEGKKGQMPGGAGVV  812

Query  769  GENGQVYLTGLQPKGTLQVSWGANASQRCTAAWRLPTGNGDSQFINLSAQCL  820
            G+NG+VYL+GL+  G L+V WG N+S  C A  RLP  +  + ++ + + C+
Sbjct  813  GDNGEVYLSGLDETGQLKVQWGRNSS--CRANYRLPEEKEATGIFLVRTVCM  862