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Homologs of vanRB gene of NC_021994_R1

389

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) vanRB
( YP_005355978.1 )

DNA-binding response regulator VanRB

NC_017022
(Enterococcus faecium Aus0004)

1e-100

100

2) vanRB
( YP_008394254.1 )

DNA-binding response regulator VanRB

NC_021994
(Enterococcus faecium AUS0085)

1e-100

100

3) vanRB
( NP_815956.1 )

DNA-binding response regulator VanRB

NC_004668
(Enterococcus faecalis V583)

1e-96

4) Pjdr2_3220
( YP_003011947.1 )

winged helix family two component transcriptional regulator

NC_012914
(Paenibacillus sp. JDR-2)

6e-87

5) BCAH820_3209
( YP_002452159.1 )

alkaline phosphatase synthesis transcriptional regulatory proteinphoP

NC_011773
(Bacillus cereus AH820)

9e-86

6) MC28_G291
( YP_006816263.1 )

Two-component response regulator vanRB

NC_018689
(Bacillus thuringiensis MC28)

2e-46

7) CBF_2020
( YP_005674903.1 )

DNA-binding response regulator

NC_017297
(Clostridium botulinum 230613)

3e-44

8) CLI_2035
( YP_001391293.1 )

DNA-binding response regulator

NC_009699
(Clostridium botulinum Langeland)

3e-44

9) H04402_01993
( YP_005678536.1 )

two-component response regulator

NC_017299
(Clostridium botulinum H04402 065)

6e-44

10) CLB_1908
( YP_001384228.1 )

DNA-binding response regulator

NC_009697
(Clostridium botulinum ATCC 19397)

7e-44

11) CBO1968
( YP_001254471.1 )

DNA-binding response regulator

NC_009495
(Clostridium botulinum ATCC 3502)

7e-44

12) CLC_1914
( YP_001387768.1 )

DNA-binding response regulator

NC_009698
(Clostridium botulinum Hall)

7e-44

13) CLM_2186
( YP_002804358.1 )

DNA-binding response regulator

NC_012563
(Clostridium botulinum Kyoto)

8e-44

14) CLJ_B2174
( YP_002862954.1 )

DNA-binding response regulator

NC_012658
(Clostridium botulinum 657)

1e-43

15) CLD_2656
( YP_001781532.1 )

DNA-binding response regulator

NC_010516
(Clostridium botulinum Okra)

9e-44

16) CLK_1423
( YP_001787361.1 )

DNA-binding response regulator

NC_010520
(Clostridium botulinum Loch Maree)

2e-43

17) Nther_0984
( YP_001917156.1 )

two component transcriptional regulator, winged helix family

NC_010718
(Natranaerobius thermophilus JW/NM-WN-LF)

3e-43

18) CD630_21140
( YP_001088628.1 )

two-component response regulator

NC_009089
(Clostridium difficile 630)

1e-42

19) CD196_1978
( YP_003214999.1 )

two-component system response regulator

NC_013315
(Clostridium difficile CD196)

1e-42

20) CDR20291_2021
( YP_003218508.1 )

two-component system response regulator

NC_013316
(Clostridium difficile R20291)

1e-42

21) LMOSLCC7179_1041
( YP_006698734.1 )

signal transduction response regulator, receiver region

NC_018593
(Listeria monocytogenes SLCC7179)

2e-42

22) Bcer98_3617
( YP_001376811.1 )

two component transcriptional regulator

NC_009674
(Bacillus cytotoxicus NVH 391-98)

3e-42

23) LM5578_1143
( YP_003413257.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

3e-42

24) LM5923_1097
( YP_003416302.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

3e-42

25) LMRG_00522
( YP_005962191.1 )

hypothetical protein

NC_017544
(Listeria monocytogenes 10403S)

3e-42

26) M642_02970
( YP_008271459.1 )

DeoR family transcriptional regulator

NC_021823
(Listeria monocytogenes C1-387)

3e-42

27) lmo1060
( NP_464585.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

3e-42

28) LMLG_2327
( YP_005970889.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017547
(Listeria monocytogenes Finland 1988)

3e-42

29) LMKG_01862
( YP_005967979.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017546
(Listeria monocytogenes FSL R2-561)

3e-42

30) LMOG_00660
( YP_005965054.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017545
(Listeria monocytogenes J0161)

3e-42

31) M639_12340
( YP_008297028.1 )

DeoR family transcriptional regulator

NC_021837
(Listeria monocytogenes J2-031)

3e-42

32) BN418_1278
( YP_007603396.1 )

Regulatory protein VanRB

NC_020557
(Listeria monocytogenes La111)

3e-42

33) BN419_1275
( YP_007606524.1 )

Regulatory protein VanRB

NC_020558
(Listeria monocytogenes N53-1)

3e-42

34) LMOSLCC2372_1074
( YP_006684401.1 )

signal transduction response regulator, receiver region

NC_018588
(Listeria monocytogenes SLCC2372)

3e-42

35) LMOSLCC2479_1073
( YP_006687336.1 )

signal transduction response regulator, receiver region

NC_018589
(Listeria monocytogenes SLCC2479)

3e-42

36) LMOSLCC5850_1066
( YP_006695893.1 )

signal transduction response regulator, receiver region

NC_018592
(Listeria monocytogenes SLCC5850)

3e-42

37) CTC00189
( NP_780902.1 )

transcriptional regulatory protein

NC_004557
(Clostridium tetani E88)

6e-42

38) lwe1038
( YP_849237.1 )

chemotaxis protein CheY

NC_008555
(Listeria welshimeri SLCC5334)

6e-42

39) OmpR2
( NP_979053.1 )

transcription response regulator-like protein

NC_003909
(Bacillus cereus ATCC 10987)

8e-42

40) Ilyop_1493
( YP_003967621.1 )

winged helix family two component transcriptional regulator

NC_014632
(Ilyobacter polytropus DSM 2926)

2e-41

41) CC1_16950
( YP_007769858.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021009
(Coprococcus catus GD/7)

2e-41

42) Csac_0418
( YP_001179248.1 )

winged helix family two component transcriptional regulator

NC_009437
(Caldicellulosiruptor saccharolyticus DSM 8903)

2e-41

43) CLS_39270
( YP_007850986.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021047
(Clostridium saccharolyticum K10)

8e-41

44) irr
( YP_006994428.1 )

response regulator

NC_019425
(Carnobacterium maltaromaticum LMA28)

1e-40

45) SSUD12_1627
( YP_006083149.1 )

winged helix family two component transcriptional regulator

NC_017621
(Streptococcus suis D12)

1e-40

46) EUBREC_1462
( YP_002937350.1 )

hypothetical protein

NC_012781
(Eubacterium rectale ATCC 33656)

2e-40

47) SSUA7_1493
( YP_006085154.1 )

winged helix family two component transcriptional regulator

NC_017622
(Streptococcus suis A7)

2e-40

48) SSUBM407_1547
( YP_003029247.1 )

response regulator protein

NC_012926
(Streptococcus suis BM407)

2e-40

49) SSUD9_1668
( YP_006081090.1 )

winged helix family two component transcriptional regulator

NC_017620
(Streptococcus suis D9)

2e-40

50) SSGZ1_1492
( YP_006074890.1 )

two-component regulator

NC_017617
(Streptococcus suis GZ1)

2e-40

51) SSUJS14_1631
( YP_006076962.1 )

winged helix family two component transcriptional regulator

NC_017618
(Streptococcus suis JS14)

2e-40

52) SSU1472
( YP_003027314.1 )

response regulator protein

NC_012925
(Streptococcus suis P1/7)

2e-40

53) YYK_07040
( YP_006650319.1 )

winged helix family two component transcriptional regulator

NC_018526
(Streptococcus suis S735)

2e-40

54) NJAUSS_1536
( YP_007571478.1 )

two-component regulator

NC_020526
(Streptococcus suis SC070731)

2e-40

55) SSUSC84_1500
( YP_003025488.1 )

response regulator protein

NC_012924
(Streptococcus suis SC84)

2e-40

56) SSU12_1607
( YP_006079034.1 )

winged helix family two component transcriptional regulator

NC_017619
(Streptococcus suis SS12)

2e-40

57) SSUST1_1538
( YP_006359408.1 )

winged helix family two component transcriptional regulator

NC_017950
(Streptococcus suis ST1)

2e-40

58) SSUST3_1504
( YP_004402109.1 )

winged helix family two component transcriptional regulator

NC_015433
(Streptococcus suis ST3)

2e-40

59) ROI_10070
( YP_007831251.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021040
(Roseburia intestinalis M50/1)

2e-40

60) CHY_1413
( YP_360245.1 )

DNA-binding response regulator

NC_007503
(Carboxydothermus hydrogenoformans Z-2901)

3e-40

61) TL13_1456
( YP_007975806.1 )

Two-component system response regulator

NC_021213
(Streptococcus suis TL13)

3e-40

62) Exig_2177
( YP_001814646.1 )

two component transcriptional regulator

NC_010556
(Exiguobacterium sibiricum 255-15)

4e-40

63) SSA_0896
( YP_001034871.1 )

two-component response transcriptional regulator

NC_009009
(Streptococcus sanguinis SK36)

6e-40

64) CXIVA_02810
( YP_004707350.1 )

hypothetical protein

NC_015737
(Clostridium sp. SY8519)

6e-40

65) RHOM_13295
( YP_004839697.1 )

DNA-binding response regulator

NC_015977
(Roseburia hominis A2-183)

1e-39

66) BBR47_41940
( YP_002773675.1 )

two-component response regulator

NC_012491
(Brevibacillus brevis NBRC 100599)

1e-39

67) BCG9842_B2563
( YP_002446154.1 )

ResD family transcriptional regulator

NC_011772
(Bacillus cereus G9842)

1e-39

68) HD73_3280
( YP_007422379.1 )

Two-component response regulator vanRB

NC_020238
(Bacillus cereus HD73)

1e-39

69) vanRB
( YP_006927455.1 )

regulatory protein VanRB

NC_018877
(Bacillus thuringiensis Bt407)

1e-39

70) CT43_CH2706
( YP_005572672.1 )

two-component response regulator VanRB

NC_017208
(Bacillus thuringiensis CT-43)

1e-39

71) BTG_06080
( YP_006602741.1 )

two-component response regulator VanRB

NC_018500
(Bacillus thuringiensis HD-771)

1e-39

72) BTF1_11125
( YP_006610340.1 )

two-component response regulator VanRB

NC_018508
(Bacillus thuringiensis HD-789)

1e-39

73) H175_ch2755
( YP_007479216.1 )

Two-component response regulator vanRB

NC_020376
(Bacillus thuringiensis IS5056)

1e-39

74) I872_02985
( YP_007922854.1 )

two-component response transcriptional regulator

NC_021175
(Streptococcus oligofermentans AS 1.3089)

2e-39

75) BcerKBAB4_2424
( YP_001645263.1 )

two component transcriptional regulator

NC_010184
(Bacillus weihenstephanensis KBAB4)

2e-39

76) Cbei_4103
( YP_001311169.1 )

two component transcriptional regulator

NC_009617
(Clostridium beijerinckii NCIMB 8052)

2e-39

77) SGO_1417
( YP_001450697.1 )

response regulator protein

NC_009785
(Streptococcus gordonii Challis)

2e-39

78) phoP
( YP_003565202.1 )

two-component response regulator PhoP

NC_014019
(Bacillus megaterium QM B1551)

2e-39

79) BTG_10940
( YP_006603683.1 )

two-component response regulator VanRB

NC_018500
(Bacillus thuringiensis HD-771)

2e-39

80) Ilyop_0701
( YP_003966836.1 )

winged helix family two component transcriptional regulator

NC_014632
(Ilyobacter polytropus DSM 2926)

2e-39

81) mprA3
( YP_005959726.1 )

response regulator MprA

NC_017542
(Paenibacillus polymyxa M1)

3e-39

82) PPSC2_c2313
( YP_003946526.1 )

alkaline phosphatase synthesis transcriptional regulatory proteinphop

NC_014622
(Paenibacillus polymyxa SC2)

3e-39

83) phoP
( YP_003599925.1 )

two-component response regulator PhoP

NC_014103
(Bacillus megaterium DSM 319)

3e-39

84) phoP
( YP_005492678.1 )

alkaline phosphatase synthesis transcriptional regulatory protein phoP

NC_017138
(Bacillus megaterium WSH-002)

3e-39

85) RTO_22280
( YP_007787241.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021015
([Ruminococcus] torques L2-14)

4e-39

86) RHOM_11290
( YP_004839298.1 )

hypothetical protein

NC_015977
(Roseburia hominis A2-183)

6e-39

87) MC28_1918
( YP_006828739.1 )

hypothetical protein

NC_018693
(Bacillus thuringiensis MC28)

9e-39

88) Ilyop_2523
( YP_003968630.1 )

two component transcriptional regulator, winged helix family

NC_014633
(Ilyobacter polytropus DSM 2926)

5e-38

89) TherJR_2641
( YP_003641378.1 )

two component transcriptional regulator, winged helix family

NC_014152
(Thermincola potens JR)

7e-38

90) HPL003_10930
( YP_005075168.1 )

transcriptional regulatory protein resD

NC_016641
(Paenibacillus terrae HPL-003)

8e-38

91) BpOF4_06195
( YP_003426193.1 )

winged helix family two component transcriptional regulator

NC_013791
(Bacillus pseudofirmus OF4)

1e-37

92) GYMC52_0823
( YP_004131444.1 )

two component transcriptional regulator, winged helix family

NC_014915
(Geobacillus sp. Y412MC52)

1e-37

93) GYMC61_1696
( YP_003252808.1 )

two component transcriptional regulator, winged helix family

NC_013411
(Geobacillus sp. Y412MC61)

1e-37

94) SFUL_3399
( YP_007932213.1 )

Two-component system response regulator

NC_021177
(Streptomyces fulvissimus DSM 40593)

2e-37

95) GTNG_0792
( YP_001124915.1 )

two-component response regulator

NC_009328
(Geobacillus thermodenitrificans NG80-2)

9e-38

96) GK0908
( YP_146761.1 )

two-component response regulator

NC_006510
(Geobacillus kaustophilus HTA426)

2e-37

97) GC56T3_2648
( YP_003672176.1 )

winged helix family two component transcriptional regulator

NC_014206
(Geobacillus sp. C56-T3)

2e-37

98) GTCCBUS3UF5_10780
( YP_004981495.1 )

Two component transcriptional regulator, winged helix

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

2e-37

99) phoP2
( YP_006714395.1 )

two-component response regulator PhoP

NC_006322
(Bacillus licheniformis DSM 13)

3e-37

100) phoP
( YP_080203.2 )

two-component response regulator

NC_006270
(Bacillus licheniformis DSM 13)

3e-37

101) phoP
( YP_008079221.1 )

two-component response regulator PhoP

NC_021362
(Bacillus licheniformis 9945A)

4e-37

102) SAIN_0610
( YP_008509059.1 )

putative two-component response regulator

NC_022244
(Streptococcus anginosus C1051)

1e-36

103) SANR_0619
( YP_008500357.1 )

putative two-component response regulator

NC_022239
(Streptococcus anginosus C238)

1e-36

104) BCE_4662
( NP_980955.1 )

DNA-binding response regulator

NC_003909
(Bacillus cereus ATCC 10987)

9e-37

105) CLS_07200
( YP_007848488.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021047
(Clostridium saccharolyticum K10)

2e-36

106) BCAH187_A4663
( YP_002340588.1 )

DNA-binding response regulator

NC_011658
(Bacillus cereus AH187)

2e-36

107) BCK_12555
( YP_006596612.1 )

DNA-binding response regulator

NC_018491
(Bacillus cereus FRI-35)

2e-36

108) BCG9842_B0590
( YP_002448103.1 )

DNA-binding response regulator

NC_011772
(Bacillus cereus G9842)

2e-36

109) BCN_4438
( YP_005106971.1 )

DNA-binding response regulator

NC_016771
(Bacillus cereus NC7401)

2e-36

110) phoP
( YP_001487773.1 )

response regulator PhoP

NC_009848
(Bacillus pumilus SAFR-032)

2e-36

111) BTG_26185
( YP_006606673.1 )

DNA-binding response regulator

NC_018500
(Bacillus thuringiensis HD-771)

2e-36

112) BTF1_21230
( YP_006612335.1 )

DNA-binding response regulator

NC_018508
(Bacillus thuringiensis HD-789)

2e-36

113) SIR_1093
( YP_008513025.1 )

putative two-component response regulator

NC_022246
(Streptococcus intermedius B196)

2e-36

114) SII_1115
( YP_008497285.1 )

putative two-component response regulator

NC_022237
(Streptococcus intermedius C270)

2e-36

115) SCIM_0547
( YP_006469449.1 )

two-component system transcriptional regulator

NC_018073
(Streptococcus intermedius JTH08)

2e-36

116) Dtox_2915
( YP_003192294.1 )

two component transcriptional regulator, winged helix family

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

3e-36

117) BCB4264_A4647
( YP_002369334.1 )

DNA-binding response regulator

NC_011725
(Bacillus cereus B4264)

3e-36

118) HD73_4832
( YP_007423931.1 )

DNA-binding response regulator

NC_020238
(Bacillus cereus HD73)

3e-36

119) phoP
( YP_006015220.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_017568
(Staphylococcus pseudintermedius ED99)

3e-36

120) SPSINT_1451
( YP_004149615.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_014925
(Staphylococcus pseudintermedius HKU10-03)

3e-36

121) Eab7_0619
( YP_006790376.1 )

two component transcriptional regulator, winged helix family

NC_018665
(Exiguobacterium antarcticum Eab7)

4e-36

122) BCAH820_4650
( YP_002453596.1 )

DNA-binding response regulator

NC_011773
(Bacillus cereus AH820)

5e-36

123) BACI_c45280
( YP_003794256.1 )

response regulator

NC_014335
(Bacillus cereus CI)

5e-36

124) Theos_0095
( YP_006971275.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019386
(Thermus oshimai JL-2)

6e-36

125) Calhy_2332
( YP_003993402.1 )

two component transcriptional regulator, winged helix family

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

1e-35

126) BT9727_4272
( YP_038587.1 )

response regulator

NC_005957
(Bacillus thuringiensis 97-27)

1e-35

127) STH3290
( YP_077115.1 )

two-component response regulator, CheY-like

NC_006177
(Symbiobacterium thermophilum IAM 14863)

1e-35

128) BC4539
( NP_834246.1 )

two-component response regulator ycbL

NC_004722
(Bacillus cereus ATCC 14579 )

7e-36

129) BMB171_C4183
( YP_003666712.1 )

two-component response regulator ycbL

NC_014171
(Bacillus thuringiensis BMB171)

7e-36

130) YBT020_22300
( YP_005568106.1 )

two-component response regulator ycbL

NC_017200
(Bacillus thuringiensis YBT-020)

9e-36

131) GY4MC1_0836
( YP_003988262.1 )

transcriptional regulator

NC_014650
(Geobacillus sp. Y4.1MC1)

9e-36

132) Geoth_0905
( YP_004586984.1 )

winged helix family two component transcriptional regulator

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

9e-36

133) BCE_2041
( NP_978356.1 )

DNA-binding response regulator

NC_003909
(Bacillus cereus ATCC 10987)

1e-35

134) BCK_24760
( YP_006599030.1 )

DNA-binding response regulator

NC_018491
(Bacillus cereus FRI-35)

1e-35

135) Desdi_1113
( YP_007220024.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019903
(Desulfitobacterium dichloroeliminans LMG P-21439)

1e-35

136) Aaci_0044
( YP_003183497.1 )

winged helix family two component transcriptional regulator

NC_013205
(Alicyclobacillus acidocaldarius DSM 446)

1e-35

137) BAA_4790
( YP_002868816.1 )

DNA-binding response regulator

NC_012659
(Bacillus anthracis A0248)

1e-35

138) BA_4777
( NP_846982.1 )

DNA-binding response regulator

NC_003997
(Bacillus anthracis Ames)

1e-35

139) GBAA_4777
( YP_021423.1 )

DNA-binding response regulator

NC_007530
(Bacillus anthracis Ames Ancestor)

1e-35

140) BAMEG_4809
( YP_002817328.1 )

DNA-binding response regulator

NC_012581
(Bacillus anthracis CDC 684)

1e-35

141) H9401_4559
( YP_006211613.1 )

Two-component response regulator ycbL

NC_017729
(Bacillus anthracis H9401)

1e-35

142) BAS4433
( YP_030680.1 )

DNA-binding response regulator

NC_005945
(Bacillus anthracis Sterne)

1e-35

143) BCA_4643
( YP_002751889.1 )

DNA-binding response regulator

NC_012472
(Bacillus cereus 03BB102)

1e-35

144) BC1956
( NP_831726.1 )

two-component response regulator

NC_004722
(Bacillus cereus ATCC 14579 )

1e-35

145) BCB4264_A1962
( YP_002366679.1 )

DNA-binding response regulator

NC_011725
(Bacillus cereus B4264)

1e-35

146) bcf_22710
( YP_005121174.1 )

DNA-binding response regulator

NC_016779
(Bacillus cereus F837/76)

1e-35

147) HD73_2121
( YP_007421220.1 )

DNA-binding response regulator

NC_020238
(Bacillus cereus HD73)

1e-35

148) BCQ_4343
( YP_002532058.1 )

response regulator

NC_011969
(Bacillus cereus Q1)

1e-35

149) BALH_4122
( YP_896839.1 )

DNA-binding response regulator

NC_008600
(Bacillus thuringiensis Al Hakam)

1e-35

150) BTG_10155
( YP_006603528.1 )

two-component response regulator

NC_018500
(Bacillus thuringiensis HD-771)

1e-35

151) GWCH70_2675
( YP_002950634.1 )

winged helix family two component transcriptional regulator

NC_012793
(Geobacillus sp. WCH70)

1e-35

152) Gura_1986
( YP_001230749.1 )

two component heavy metal response transcriptional regulator

NC_009483
(Geobacter uraniireducens Rf4)

1e-35

153) Amet_3209
( YP_001321006.1 )

two component transcriptional regulator

NC_009633
(Alkaliphilus metalliredigens QYMF)

2e-35

154) BMB171_C1742
( YP_003664277.1 )

two-component response regulator

NC_014171
(Bacillus thuringiensis BMB171)

2e-35

155) BCG9842_B3366
( YP_002445355.1 )

DNA-binding response regulator

NC_011772
(Bacillus cereus G9842)

2e-35

156) BTF1_07175
( YP_006609568.1 )

DNA-binding response regulator

NC_018508
(Bacillus thuringiensis HD-789)

2e-35

157) Calow_0190
( YP_004001596.1 )

two component transcriptional regulator, winged helix family

NC_014657
(Caldicellulosiruptor owensensis OL)

3e-35

158) SSU05_1661
( YP_001199027.1 )

two-component regulator

NC_009442
(Streptococcus suis 05ZYH33)

3e-35

159) BCZK4283
( YP_085862.1 )

response regulator

NC_006274
(Bacillus cereus E33L)

3e-35

160) Lacal_1289
( YP_004579565.1 )

winged helix family two component transcriptional regulator

NC_015638
(Lacinutrix sp. 5H-3-7-4)

3e-35

161) pcoR
( YP_007521519.1 )

Transcriptional regulatory protein pcoR

NC_020504
(Streptomyces davawensis JCM 4913)

3e-35

162) Ththe16_1739
( YP_005641261.1 )

winged helix family two component transcriptional regulator

NC_017272
(Thermus thermophilus SG0.5JP17-16)

3e-35

163) Bcer98_3274
( YP_001376488.1 )

two component transcriptional regulator

NC_009674
(Bacillus cytotoxicus NVH 391-98)

4e-35

164) Calkr_0246
( YP_004025424.1 )

two component transcriptional regulator, winged helix family

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

4e-35

165) Calla_2103
( YP_004799643.1 )

winged helix family two component transcriptional regulator

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

4e-35

166) hssR1
( YP_006926654.1 )

heme response regulator HssR

NC_018877
(Bacillus thuringiensis Bt407)

4e-35

167) czcR2
( YP_001354044.1 )

heavy metal response regulator

NC_009659
(Janthinobacterium sp. Marseille)

4e-35

168) CT43_CH1910
( YP_005571885.1 )

two-component response regulator

NC_017208
(Bacillus thuringiensis CT-43)

5e-35

169) BCAH187_A2062
( YP_002338015.1 )

DNA-binding response regulator

NC_011658
(Bacillus cereus AH187)

6e-35

170) BCN_1873
( YP_005104406.1 )

DNA-binding response regulator

NC_016771
(Bacillus cereus NC7401)

6e-35

171) H175_ch1937
( YP_007478398.1 )

Two-component system response regulator QseB

NC_020376
(Bacillus thuringiensis IS5056)

6e-35

172) Clocl_1711
( YP_005046247.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_016627
(Clostridium clariflavum DSM 19732)

6e-35

173) GTNG_2656
( YP_001126746.1 )

two-component response regulator

NC_009328
(Geobacillus thermodenitrificans NG80-2)

6e-35

174) yclJ
( YP_001697771.1 )

sensory transduction protein

NC_010382
(Lysinibacillus sphaericus C3-41)

6e-35

175) COB47_0246
( YP_003839586.1 )

winged helix family two component transcriptional regulator

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

7e-35

176) BCQ_1947
( YP_002529664.1 )

response regulator

NC_011969
(Bacillus cereus Q1)

7e-35

177) Cthe_1600
( YP_001038019.1 )

two component transcriptional regulator

NC_009012
(Clostridium thermocellum ATCC 27405)

7e-35

178) PM3016_1778
( YP_005311837.1 )

two-component response regulator

NC_016935
(Paenibacillus mucilaginosus 3016)

8e-35

179) B2K_09055
( YP_006188630.1 )

heme response regulator HssR

NC_017672
(Paenibacillus mucilaginosus K02)

8e-35

180) KNP414_01465
( YP_004639899.1 )

two-component response regulator

NC_015690
(Paenibacillus mucilaginosus KNP414)

8e-35

181) BT9727_1790
( YP_036122.1 )

response regulator

NC_005957
(Bacillus thuringiensis 97-27)

9e-35

182) YBT020_10175
( YP_005565699.1 )

response regulator

NC_017200
(Bacillus thuringiensis YBT-020)

9e-35

183) Cyan7425_2927
( YP_002483628.1 )

winged helix family two component transcriptional regulator

NC_011884
(Cyanothece sp. PCC 7425)

1e-34

184) BCA_2021
( YP_002749295.1 )

DNA-binding response regulator

NC_012472
(Bacillus cereus 03BB102)

1e-34

185) BCAH820_1991
( YP_002450942.1 )

DNA-binding response regulator

NC_011773
(Bacillus cereus AH820)

1e-34

186) BCZK1772
( YP_083367.1 )

response regulator

NC_006274
(Bacillus cereus E33L)

1e-34

187) bcf_09635
( YP_005118562.1 )

Two-component system response regulator QseB

NC_016779
(Bacillus cereus F837/76)

1e-34

188) BALH_1732
( YP_894563.1 )

DNA-binding response regulator

NC_008600
(Bacillus thuringiensis Al Hakam)

1e-34

189) BcerKBAB4_1824
( YP_001644685.1 )

two component transcriptional regulator

NC_010184
(Bacillus weihenstephanensis KBAB4)

1e-34

190) BcerKBAB4_4419
( YP_001647206.1 )

two component transcriptional regulator

NC_010184
(Bacillus weihenstephanensis KBAB4)

1e-34

191) Calhy_0173
( YP_003991301.1 )

two component transcriptional regulator, winged helix family

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

1e-34

192) MC28_1161
( YP_006827982.1 )

hypothetical protein

NC_018693
(Bacillus thuringiensis MC28)

2e-34

193) CPR_1891
( YP_699201.1 )

DNA-binding response regulator

NC_008262
(Clostridium perfringens SM101)

2e-34

194) MTES_1459
( YP_004224303.1 )

response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_015125
(Microbacterium testaceum StLB037)

2e-34

195) phoP
( YP_253147.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

2e-34

196) regX3
( YP_006992784.2 )

response regulator

NC_019425
(Carnobacterium maltaromaticum LMA28)

2e-34

197) irr
( YP_002996640.1 )

two-component response regulator

NC_012891
(Streptococcus dysgalactiae GGS_124)

2e-34

198) irr
( YP_006933783.1 )

response regulator

NC_018936
(Streptococcus pyogenes A20)

2e-34

199) SPYALAB49_001707
( YP_006072826.1 )

response regulator

NC_017596
(Streptococcus pyogenes Alab49)

2e-34

200) L897_08600
( YP_008243959.1 )

chemotaxis protein CheY

NC_021807
(Streptococcus pyogenes HSC5)

2e-34

201) ir
( YP_007588282.1 )

two-component response regulator

NC_020540
(Streptococcus pyogenes M1 476)

2e-34

202) SpyM51688
( YP_001129204.1 )

response regulator protein

NC_009332
(Streptococcus pyogenes Manfredo)

2e-34

203) irr
( YP_599400.1 )

Two-component response regulator

NC_008022
(Streptococcus pyogenes MGAS10270)

2e-34

204) M6_Spy1725
( YP_061043.1 )

two-component response regulator

NC_006086
(Streptococcus pyogenes MGAS10394)

2e-34

205) irr
( YP_603310.1 )

two-component response regulator

NC_008024
(Streptococcus pyogenes MGAS10750)

2e-34

206) irr
( YP_005389576.1 )

TCS signal tranduction response regulator Irr

NC_017040
(Streptococcus pyogenes MGAS15252)

2e-34

207) irr
( YP_005412339.1 )

TCS signal tranduction response regulator Irr

NC_017053
(Streptococcus pyogenes MGAS1882)

2e-34

208) irr
( YP_601349.1 )

two-component response regulator

NC_008023
(Streptococcus pyogenes MGAS2096)

2e-34

209) SpyM3_1733
( NP_665537.1 )

two-component response regulator

NC_004070
(Streptococcus pyogenes MGAS315)

2e-34

210) irr
( YP_283088.1 )

two-component response regulator

NC_007297
(Streptococcus pyogenes MGAS5005)

2e-34

211) irr
( YP_281174.1 )

two-component response regulator

NC_007296
(Streptococcus pyogenes MGAS6180)

2e-34

212) spyM18_2084
( NP_608052.1 )

two-component response regulator

NC_003485
(Streptococcus pyogenes MGAS8232)

2e-34

213) irr
( YP_597461.1 )

two-component response regulator

NC_008021
(Streptococcus pyogenes MGAS9429)

2e-34

214) Spy49_1677c
( YP_002286626.1 )

two-component system response regulator

NC_011375
(Streptococcus pyogenes NZ131)

2e-34

215) SPy_2027
( NP_269978.1 )

two-component response regulator

NC_002737
(Streptococcus pyogenes SF370)

2e-34

216) SPs1730
( NP_802992.1 )

two-component response regulator

NC_004606
(Streptococcus pyogenes SSI-1)

2e-34

217) phoP
( NP_981013.1 )

DNA-binding response regulator PhoP

NC_003909
(Bacillus cereus ATCC 10987)

3e-34

218) BC4589
( NP_834295.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_004722
(Bacillus cereus ATCC 14579 )

3e-34

219) phoP
( YP_002369385.1 )

DNA-binding response regulator PhoP

NC_011725
(Bacillus cereus B4264)

3e-34

220) BCK_12275
( YP_006596556.1 )

DNA-binding response regulator PhoP

NC_018491
(Bacillus cereus FRI-35)

3e-34

221) phoP
( YP_002448153.1 )

DNA-binding response regulator PhoP

NC_011772
(Bacillus cereus G9842)

3e-34

222) HD73_4884
( YP_007423983.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_020238
(Bacillus cereus HD73)

3e-34

223) phoP
( YP_002532107.1 )

DNA-binding response regulator phop

NC_011969
(Bacillus cereus Q1)

3e-34

224) phoP
( YP_003666761.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_014171
(Bacillus thuringiensis BMB171)

3e-34

225) phoP2
( YP_006929356.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_018877
(Bacillus thuringiensis Bt407)

3e-34

226) phoP
( YP_005574559.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017208
(Bacillus thuringiensis CT-43)

3e-34

227) BTG_25920
( YP_006606620.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_018500
(Bacillus thuringiensis HD-771)

3e-34

228) BTF1_21485
( YP_006612386.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_018508
(Bacillus thuringiensis HD-789)

3e-34

229) H175_ch4682
( YP_007481140.1 )

Alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_020376
(Bacillus thuringiensis IS5056)

3e-34

230) YBT020_22565
( YP_005568159.1 )

DNA-binding response regulator PhoP

NC_017200
(Bacillus thuringiensis YBT-020)

3e-34

231) irr
( YP_006904521.1 )

transcriptional regulator ycf27

NC_019042
(Streptococcus dysgalactiae AC-2713)

3e-34

232) SDE12394_05215
( YP_006013107.1 )

Two-component system response regulator

NC_017567
(Streptococcus dysgalactiae ATCC 12394)

3e-34

233) irr
( YP_006859544.1 )

two-component response regulator

NC_018712
(Streptococcus dysgalactiae RE378)

3e-34

234) Cbei_1731
( YP_001308859.1 )

two component transcriptional regulator

NC_009617
(Clostridium beijerinckii NCIMB 8052)

4e-34

235) phoP
( YP_002868868.1 )

DNA-binding response regulator PhoP

NC_012659
(Bacillus anthracis A0248)

4e-34

236) phoP
( NP_847036.1 )

DNA-binding response regulator PhoP

NC_003997
(Bacillus anthracis Ames)

4e-34

237) phoP
( YP_021478.1 )

DNA-binding response regulator PhoP

NC_007530
(Bacillus anthracis Ames Ancestor)

4e-34

238) phoP
( YP_002817382.1 )

DNA-binding response regulator PhoP

NC_012581
(Bacillus anthracis CDC 684)

4e-34

239) H9401_4612
( YP_006211666.1 )

Alkaline phosphatase synthesis response regulator

NC_017729
(Bacillus anthracis H9401)

4e-34

240) BAS4484
( YP_030731.1 )

DNA-binding response regulator PhoP

NC_005945
(Bacillus anthracis Sterne)

4e-34

241) phoP
( YP_002751944.1 )

DNA-binding response regulator PhoP

NC_012472
(Bacillus cereus 03BB102)

4e-34

242) phoP
( YP_002340638.1 )

DNA-binding response regulator PhoP

NC_011658
(Bacillus cereus AH187)

4e-34

243) phoP
( YP_002453650.1 )

DNA-binding response regulator PhoP

NC_011773
(Bacillus cereus AH820)

4e-34

244) phoP2
( YP_003794305.1 )

alkaline phosphatase synthesis response regulator

NC_014335
(Bacillus cereus CI)

4e-34

245) phoP
( YP_085909.1 )

alkaline phosphatase synthesis response regulator

NC_006274
(Bacillus cereus E33L)

4e-34

246) bcf_22985
( YP_005121229.1 )

Alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_016779
(Bacillus cereus F837/76)

4e-34

247) BCN_4489
( YP_005107022.1 )

DNA-binding response regulator PhoP

NC_016771
(Bacillus cereus NC7401)

4e-34

248) phoP
( YP_038634.1 )

alkaline phosphatase synthesis response regulator

NC_005957
(Bacillus thuringiensis 97-27)

4e-34

249) phoP
( YP_896887.1 )

alkaline phosphatase synthesis response regulator

NC_008600
(Bacillus thuringiensis Al Hakam)

4e-34

250) Eab7_2024
( YP_006791735.1 )

hypothetical protein

NC_018665
(Exiguobacterium antarcticum Eab7)

6e-34

251) Amet_0288
( YP_001318179.1 )

two component transcriptional regulator

NC_009633
(Alkaliphilus metalliredigens QYMF)

1e-33

252) H9401_1853
( YP_006208907.1 )

DNA-binding response regulator

NC_017729
(Bacillus anthracis H9401)

1e-33

253) MC28_3867
( YP_006830688.1 )

export protein for polysaccharides and teichoic acids

NC_018693
(Bacillus thuringiensis MC28)

1e-33

254) Toce_1455
( YP_003825830.1 )

two component transcriptional regulator, winged helix family

NC_014377
(Thermosediminibacter oceani DSM 16646)

7e-34

255) BAMEG_2635
( YP_002815233.1 )

DNA-binding response regulator

NC_012581
(Bacillus anthracis CDC 684)

9e-34

256) BAA_2025
( YP_002866357.1 )

DNA-binding response regulator

NC_012659
(Bacillus anthracis A0248)

2e-33

257) BA_1955
( NP_844363.2 )

DNA-binding response regulator

NC_003997
(Bacillus anthracis Ames)

2e-33

258) GBAA_1955
( YP_018600.3 )

DNA-binding response regulator

NC_007530
(Bacillus anthracis Ames Ancestor)

2e-33

259) BAS1816
( YP_028080.1 )

DNA-binding response regulator

NC_005945
(Bacillus anthracis Sterne)

2e-33

260) Cspa_c27970
( YP_007455814.1 )

Two component transcriptional regulator, winged helix family

NC_020291
(Clostridium saccharoperbutylacetonicum N1-4(HMT))

3e-33

261) Aaci_2264
( YP_003185662.1 )

winged helix family two component transcriptional regulator

NC_013205
(Alicyclobacillus acidocaldarius DSM 446)

3e-33

262) ANT_22660
( YP_004174892.1 )

OmpR family two-component response regulator

NC_014960
(Anaerolinea thermophila UNI-1)

3e-33

263) STH750
( YP_074579.1 )

two-component response regulator

NC_006177
(Symbiobacterium thermophilum IAM 14863)

3e-33

264) Spico_0394
( YP_004411005.1 )

winged helix family two component transcriptional regulator

NC_015436
(Sphaerochaeta coccoides DSM 17374)

6e-33

265) AAur_1575
( YP_947342.1 )

two-component system response regulator

NC_008711
(Arthrobacter aurescens TC1)

1e-32

266) Thal_0320
( YP_003473082.1 )

transcriptional regulator

NC_013894
(Thermocrinis albus DSM 14484)

7e-33

267) SLGD_01236
( YP_003471454.1 )

Alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_013893
(Staphylococcus lugdunensis HKU09-01)

9e-33

268) phoP
( YP_005760352.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_017353
(Staphylococcus lugdunensis N920143)

9e-33

269) EAT1b_0324
( YP_002884702.1 )

two component transcriptional regulator, winged helix family

NC_012673
(Exiguobacterium sp. AT1b)

1e-32

270) Apre_1374
( YP_003153118.1 )

winged helix family two component transcriptional regulator

NC_013171
(Anaerococcus prevotii DSM 20548)

1e-32

271) phoB
( YP_004897386.1 )

two-component system transcriptional regulator

NC_016077
(Acidaminococcus intestini RyC-MR95)

2e-32

272) Clole_0645
( YP_004307577.1 )

transcriptional regulator

NC_015275
(Clostridium lentocellum DSM 5427)

5e-32

273) Gobs_2351
( YP_003409398.1 )

winged helix family two component transcriptional regulator

NC_013757
(Geodermatophilus obscurus DSM 43160)

7e-32

274) Slip_0097
( YP_003701462.1 )

winged helix family two component transcriptional regulator

NC_014220
(Syntrophothermus lipocalidus DSM 12680)

9e-32

275) SEQ_1549
( YP_002746806.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_012471
(Streptococcus equi 4047)

1e-31

276) phoB1
( YP_006043340.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_017582
(Streptococcus equi ATCC 35246)

1e-31

277) SZO_06010
( YP_002744152.1 )

alkaline phosphatase synthesis transcriptional regulatory protein

NC_012470
(Streptococcus equi H70)

1e-31

278) Dacsa_0514
( YP_007170655.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019780
(Dactylococcopsis salina PCC 8305)

1e-31

279) BN6_74520
( YP_007041552.1 )

Two-component system, response regulator of the winged helix family

NC_019673
(Saccharothrix espanaensis DSM 44229)

2e-31

280) phoP
( YP_002123718.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_011134
(Streptococcus equi MGCS10565)

2e-31

281) Ferpe_0988
( YP_005471217.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_017095
(Fervidobacterium pennivorans DSM 9078)

3e-31

282) BBR47_03530
( YP_002769834.1 )

two-component response regulator

NC_012491
(Brevibacillus brevis NBRC 100599)

3e-31

283) HM1_1535
( YP_001680118.1 )

transcriptional regulator

NC_010337
(Heliobacterium modesticaldum Ice1)

3e-31

284) Ocepr_1908
( YP_004058533.1 )

winged helix family two component transcriptional regulator

NC_014761
(Oceanithermus profundus DSM 14977)

4e-31

285) CKL_2350
( YP_001395733.1 )

transcriptional regulator

NC_009706
(Clostridium kluyveri DSM 555)

6e-31

286) CKR_2070
( YP_002472535.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

6e-31

287) phoP1
( YP_004201569.1 )

alkaline phosphatase synthesis transcriptional regulatory protein PhoP

NC_014974
(Thermus scotoductus SA-01)

6e-31

288) CCU_10100
( YP_007796056.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021018
(Coprococcus sp. ART55/1)

1e-30

289) BBR47_03300
( YP_002769811.1 )

two-component response regulator

NC_012491
(Brevibacillus brevis NBRC 100599)

1e-30

290) CK3_01800
( YP_007822541.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021035
(butyrate-producing bacterium SS3/4)

1e-30

291) phoP
( YP_006904175.1 )

transcriptional regulator ycf27

NC_019042
(Streptococcus dysgalactiae AC-2713)

7e-31

292) SDE12394_02985
( YP_006012702.1 )

alkaline phosphatase synthesis transcriptional regulatory proteinphoP

NC_017567
(Streptococcus dysgalactiae ATCC 12394)

7e-31

293) phoP
( YP_002996305.1 )

two-component response regulator

NC_012891
(Streptococcus dysgalactiae GGS_124)

7e-31

294) phoP
( YP_006859215.1 )

two-component response regulator

NC_018712
(Streptococcus dysgalactiae RE378)

7e-31

295) Mahau_0744
( YP_004462766.1 )

winged helix family two component transcriptional regulator

NC_015520
(Mahella australiensis 50-1 BON)

2e-30

296) SSU98_1672
( YP_001201230.1 )

two-component regulator

NC_009443
(Streptococcus suis 98HAH33)

2e-30

297) Dvul_1911
( YP_967354.1 )

two component transcriptional regulator

NC_008751
(Desulfovibrio vulgaris DP4)

2e-30

298) phoB
( YP_010304.1 )

phosphate regulon transcriptional regulator PhoB

NC_002937
(Desulfovibrio vulgaris Hildenborough)

2e-30

299) Deval_1001
( YP_005701803.1 )

winged helix family two component transcriptional regulator

NC_017310
(Desulfovibrio vulgaris RCH1)

2e-30

300) Mesil_0142
( YP_003683595.1 )

winged helix family two component transcriptional regulator

NC_014212
(Meiothermus silvanus DSM 9946)

3e-30

301) BN6_45450
( YP_007038698.1 )

Two-component system, response regulator of the winged helix family

NC_019673
(Saccharothrix espanaensis DSM 44229)

3e-30

302) AXY_06550
( YP_006844549.1 )

two-component system response regulator

NC_018704
(Amphibacillus xylanus NBRC 15112)

3e-30

303) CPF_2180
( YP_696604.1 )

DNA-binding response regulator

NC_008261
(Clostridium perfringens ATCC 13124)

3e-30

304) UWK_01389
( YP_007467602.1 )

CheY-like receiver and winged-helix DNA-binding domain-containing response regulator

NC_020304
(Desulfocapsa sulfexigens DSM 10523)

5e-30

305) Sulac_0734
( YP_005255913.1 )

winged helix family two component transcriptional regulator

NC_016884
(Sulfobacillus acidophilus DSM 10332)

5e-30

306) vicR
( YP_004719432.1 )

two component transcriptional regulator

NC_015757
(Sulfobacillus acidophilus TPY)

5e-30

307) Cphy_2827
( YP_001559926.1 )

two component transcriptional regulator

NC_010001
(Clostridium phytofermentans ISDg)

1e-29

308) Krad_3815
( YP_001363542.1 )

winged helix family two component transcriptional regulator

NC_009664
(Kineococcus radiotolerans SRS30216)

1e-29

309) Mesil_2802
( YP_003686154.1 )

winged helix family two component transcriptional regulator

NC_014212
(Meiothermus silvanus DSM 9946)

7e-30

310) Slip_0815
( YP_003702160.1 )

winged helix family two component transcriptional regulator

NC_014220
(Syntrophothermus lipocalidus DSM 12680)

8e-30

311) Desde_1577
( YP_006429775.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_018017
(Desulfitobacterium dehalogenans ATCC 51507)

1e-29

312) Csac_2034
( YP_001180810.1 )

winged helix family two component transcriptional regulator

NC_009437
(Caldicellulosiruptor saccharolyticus DSM 8903)

1e-29

313) Namu_4670
( YP_003203936.1 )

winged helix family two component transcriptional regulator

NC_013235
(Nakamurella multipartita DSM 44233)

2e-29

314) CYB_2856
( YP_479038.1 )

DNA-binding response regulator

NC_007776
(Synechococcus sp. JA-2-3B'a(2-13))

3e-29

315) ROP_pROB01-01890
( YP_002776540.1 )

putative OmpR family two-component response regulator

NC_012520
(Rhodococcus opacus B4)

4e-29

316) RTO_22740
( YP_007787283.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021015
([Ruminococcus] torques L2-14)

1e-28

317) HD73_5124
( YP_007424223.1 )

DNA-binding response regulator

NC_020238
(Bacillus cereus HD73)

1e-28

318) BTG_24745
( YP_006606389.1 )

two-component response regulator

NC_018500
(Bacillus thuringiensis HD-771)

1e-28

319) BMB171_C4446
( YP_003666974.1 )

two-component response regulator

NC_014171
(Bacillus thuringiensis BMB171)

2e-28

320) Desku_2766
( YP_004518081.1 )

winged helix family two component transcriptional regulator

NC_015573
(Desulfotomaculum kuznetsovii DSM 6115)

2e-28

321) MC28_4098
( YP_006830919.1 )

RNA-binding S4 domain-containing protein

NC_018693
(Bacillus thuringiensis MC28)

2e-28

322) Athe_0280
( YP_002572201.1 )

winged helix family two component transcriptional regulator

NC_012034
(Caldicellulosiruptor bescii DSM 6725)

4e-28

323) Cphy_1676
( YP_001558787.1 )

two component transcriptional regulator

NC_010001
(Clostridium phytofermentans ISDg)

5e-28

324) SYO3AOP1_1480
( YP_001931636.1 )

winged helix family two component transcriptional regulator

NC_010730
(Sulfurihydrogenibium sp. YO3AOP1)

5e-28

325) AM1_4053
( YP_001518350.1 )

two-component transcriptional regulator

NC_009925
(Acaryochloris marina MBIC11017)

6e-28

326) Dtur_0537
( YP_002352441.1 )

winged helix family two component transcriptional regulator

NC_011661
(Dictyoglomus turgidum DSM 6724)

1e-27

327) BCE_4969
( NP_981262.1 )

DNA-binding response regulator

NC_003909
(Bacillus cereus ATCC 10987)

1e-27

328) YBT020_23760
( YP_005568398.1 )

two-component response regulator

NC_017200
(Bacillus thuringiensis YBT-020)

1e-27

329) BCK_11070
( YP_006596319.1 )

DNA-binding response regulator

NC_018491
(Bacillus cereus FRI-35)

2e-27

330) BCAH187_A4952
( YP_002340873.1 )

DNA-binding response regulator

NC_011658
(Bacillus cereus AH187)

2e-27

331) BCN_4728
( YP_005107261.1 )

DNA-binding response regulator

NC_016771
(Bacillus cereus NC7401)

2e-27

332) BCQ_4626
( YP_002532341.1 )

two-component response regulator

NC_011969
(Bacillus cereus Q1)

2e-27

333) BT9727_4546
( YP_038858.1 )

DNA-binding response regulator

NC_005957
(Bacillus thuringiensis 97-27)

3e-27

334) COB47_0270
( YP_003839603.1 )

winged helix family two component transcriptional regulator

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

4e-27

335) BC4810
( NP_834510.1 )

two-component response regulator

NC_004722
(Bacillus cereus ATCC 14579 )

4e-27

336) BCB4264_A4937
( YP_002369621.1 )

DNA-binding response regulator

NC_011725
(Bacillus cereus B4264)

4e-27

337) BCZK4564
( YP_086139.1 )

DNA-binding response regulator

NC_006274
(Bacillus cereus E33L)

4e-27

338) CYA_1033
( YP_474491.1 )

DNA-binding response regulator

NC_007775
(Synechococcus sp. JA-3-3Ab)

5e-27

339) BCA_4953
( YP_002752195.1 )

DNA-binding response regulator

NC_012472
(Bacillus cereus 03BB102)

5e-27

340) BALH_4385
( YP_897091.1 )

two-component response regulator

NC_008600
(Bacillus thuringiensis Al Hakam)

5e-27

341) Cyagr_1052
( YP_007045574.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019675
(Cyanobium gracile PCC 6307)

1e-26

342) ELI_1637
( YP_003959586.1 )

response regulator

NC_014624
(Eubacterium limosum KIST612)

1e-26

343) Mrub_1539
( YP_003507321.1 )

winged helix family two component transcriptional regulator

NC_013946
(Meiothermus ruber DSM 1279)

2e-26

344) K649_14865
( YP_007881756.1 )

winged helix family two component transcriptional regulator

NC_021081
(Meiothermus ruber DSM 1279)

2e-26

345) Mrub_0302
( YP_003506100.1 )

winged helix family two component transcriptional regulator

NC_013946
(Meiothermus ruber DSM 1279)

5e-26

346) K649_01130
( YP_007879031.1 )

winged helix family two component transcriptional regulator

NC_021081
(Meiothermus ruber DSM 1279)

5e-26

347) Gura_2556
( YP_001231307.1 )

two component transcriptional regulator

NC_009483
(Geobacter uraniireducens Rf4)

7e-26

348) Cha6605_0660
( YP_007095463.1 )

response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

NC_019697
(Chamaesiphon minutus PCC 6605)

9e-26

349) Mrub_2805
( YP_003508572.1 )

winged helix family two component transcriptional regulator

NC_013946
(Meiothermus ruber DSM 1279)

9e-26

350) CCALI_01167
( YP_008089110.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021487
(Chthonomonas calidirosea T49)

1e-25

351) EUR_30210
( YP_007774055.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021010
(Eubacterium rectale DSM 17629)

2e-25

352) ERE_02700
( YP_007841199.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021044
(Eubacterium rectale M104/1)

2e-25

353) ROI_06060
( YP_007830913.1 )

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

NC_021040
(Roseburia intestinalis M50/1)

2e-25

354) Gura_1572
( YP_001230341.1 )

two component transcriptional regulator

NC_009483
(Geobacter uraniireducens Rf4)

2e-25

355) Deipr_2674
( YP_004257035.1 )

two component transcriptional regulator, winged helix family

NC_015163
(Deinococcus proteolyticus MRP)

3e-25

356) Marky_0243
( YP_004367114.1 )

two component transcriptional regulator, winged helix family

NC_015387
(Marinithermus hydrothermalis DSM 14884)

1e-24

357) EUBELI_01659
( YP_002931097.1 )

two-component system OmpR family response regulator ResD

NC_012778
(Eubacterium eligens ATCC 27750)

1e-24

358) Desaf_0871
( YP_005050878.1 )

two component transcriptional regulator, winged helix family

NC_016629
(Desulfovibrio africanus Walvis Bay)

2e-24

359) Moth_1478
( YP_430331.1 )

two component transcriptional regulator

NC_007644
(Moorella thermoacetica ATCC 39073)

2e-24

360) Calkro_1223
( YP_004023903.1 )

two component transcriptional regulator, winged helix family

NC_014720
(Caldicellulosiruptor kronotskyensis 2002)

4e-24

361) Theam_1237
( YP_004151842.1 )

two component transcriptional regulator, winged helix family

NC_014926
(Thermovibrio ammonificans HB-1)

5e-24

362) Desku_2044
( YP_004517400.1 )

winged helix family two component transcriptional regulator

NC_015573
(Desulfotomaculum kuznetsovii DSM 6115)

1e-23

363) LMKG_02720
( YP_005969384.1 )

DNA-binding response regulator

NC_017546
(Listeria monocytogenes FSL R2-561)

1e-23

364) SFUL_3754
( YP_007932557.1 )

Two-component system response regulator

NC_021177
(Streptomyces fulvissimus DSM 40593)

1e-23

365) Ethha_1035
( YP_004091319.1 )

two component transcriptional regulator, winged helix family

NC_014828
(Ethanoligenens harbinense YUAN-3)

2e-23

366) COB47_1067
( YP_003840352.1 )

winged helix family two component transcriptional regulator

NC_014392
(Caldicellulosiruptor obsidiansis OB47)

3e-23

367) Calow_1266
( YP_004002624.1 )

two component transcriptional regulator, winged helix family

NC_014657
(Caldicellulosiruptor owensensis OL)

3e-23

368) Calhy_1249
( YP_003992338.1 )

two component transcriptional regulator, winged helix family

NC_014652
(Caldicellulosiruptor hydrothermalis 108)

4e-23

369) Amir_1933
( YP_003099727.1 )

winged helix family two component transcriptional regulator

NC_013093
(Actinosynnema mirum DSM 43827)

9e-23

370) Fphi_1209
( YP_001677935.1 )

response regulator receiver protein

NC_010336
(Francisella philomiragia ATCC 25017)

2e-22

371) Calkr_1472
( YP_004026587.1 )

two component transcriptional regulator, winged helix family

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

2e-22

372) Calla_0857
( YP_004798485.1 )

winged helix family two component transcriptional regulator

NC_015949
(Caldicellulosiruptor lactoaceticus 6A)

2e-22

373) F7308_0805
( YP_004647332.1 )

DNA-binding response regulator

NC_015696
(Francisella sp. TX077308)

2e-22

374) EAT1b_1752
( YP_002886123.1 )

two component transcriptional regulator, winged helix family

NC_012673
(Exiguobacterium sp. AT1b)

3e-22

375) PM3016_6981
( YP_005316721.1 )

winged helix family two component transcriptional regulator

NC_016935
(Paenibacillus mucilaginosus 3016)

4e-22

376) B2K_35215
( YP_006193659.1 )

regulator

NC_017672
(Paenibacillus mucilaginosus K02)

4e-22

377) KNP414_07428
( YP_004645802.1 )

winged helix family two component transcriptional regulator

NC_015690
(Paenibacillus mucilaginosus KNP414)

4e-22

378) Ent638_3617
( YP_001178325.1 )

DNA-binding transcriptional regulator BasR

NC_009436
(Enterobacter sp. 638)

2e-21

379) FMG_0591
( YP_001691899.1 )

two-component response regulator

NC_010376
(Finegoldia magna ATCC 29328)

7e-21

380) GK3474
( YP_149327.1 )

two-component response regulator

NC_006510
(Geobacillus kaustophilus HTA426)

4e-20

381) GC56T3_3456
( YP_003672943.1 )

winged helix family two component transcriptional regulator

NC_014206
(Geobacillus sp. C56-T3)

4e-20

382) walR
( YP_007403804.1 )

two-component response regulator

NC_020210
(Geobacillus sp. GHH01)

4e-20

383) GTCCBUS3UF5_38910
( YP_004984289.1 )

transcriptional regulatory protein walR

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

4e-20

384) GYMC52_3572
( YP_004134055.1 )

two component transcriptional regulator, winged helix family

NC_014915
(Geobacillus sp. Y412MC52)

4e-20

385) GYMC61_3538
( YP_003254565.1 )

two component transcriptional regulator, winged helix family

NC_013411
(Geobacillus sp. Y412MC61)

4e-20

386) phoB
( YP_007600347.1 )

phosphate regulon response regulator

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

5e-19

387) HCN_0446
( YP_006234853.1 )

phosphate regulon response regulator PhoB

NC_017761
(Helicobacter cinaedi PAGU611)

5e-19

388) yycF
( YP_001127497.1 )

two-component response regulater

NC_009328
(Geobacillus thermodenitrificans NG80-2)

1e-18

389) Ocepr_0547
( YP_004057178.1 )

winged helix family two component transcriptional regulator

NC_014761
(Oceanithermus profundus DSM 14977)

3e-18

• Sequence Alignments

1) vanRB in NC_017022


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  359 bits (1347),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)

Query  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60
            MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120
            GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180
            GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219
            YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

2) vanRB in NC_021994


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  359 bits (1347),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%)

Query  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60
            MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120
            GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180
            GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219
            YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

3) vanRB in NC_004668


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  345 bits (1296),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 211/219 (97%), Positives = 216/219 (99%), Gaps = 0/219 (0%)

Query  1    MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMN  60
            MSIRILLVEDDDHICNTVRAFLAEA Y+VDACTDGNEA TKFYENTYQLVILDIMLPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRRS  120
            GHELLREFRA+NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKM+ILLKRVEALLRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GALAKEFRVGRLTLLPEDFRVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180
            GALAKE+RVGRLTLLPEDF VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFDGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219
            YDF+GDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

4) Pjdr2_3220 in NC_012914


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  313 bits (1173),  Expect = 6e-87, Method: Compositional matrix adjust.
 Identities = 180/219 (83%), Positives = 202/219 (93%), Gaps = 0/219 (0%)

Query  1    MDIRILLVEDDEHIGNTVKTFLIEAGYKVDVCINGIEAYTNFYNHTYQLVILDIMLPGMS  60
            M IRILLVEDD+HI NTV++FL EAGY+VD C +G EAYT+FY++TYQLVILDIMLPGM+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRKRNNTPILMMTALSDDENQIKAFDAEADDYVTKPFKIQLLLKRVGALLRRS  120
            GHELLREFR +N+TPILMMTALSDDENQI+AFDAEADDYVTKPFK+Q+LLKRV ALLRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GALAKEIRCSNLTILPDDFRALYDGVELPLTLKEFEILMLLVQNKGRTLSHEIILSRVWG  180
            GALAKEIR + LT+LP+DF  L DG ELPLT KEFEIL+LLVQNKGRTL+HEIILSR+WG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFDGDGSTVHTHIKNLRAKLPENMIKTARGVGYRLEED  219
            YDF+GDGSTVHTHIKNLRAKLPEN+IKT RGVGYRLEE 
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

5) BCAH820_3209 in NC_011773


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  309 bits (1158),  Expect = 9e-86, Method: Compositional matrix adjust.
 Identities = 177/219 (81%), Positives = 206/219 (95%), Gaps = 0/219 (0%)

Query  1    MDIRILLVEDDEHICNAVKVFLSGAGYKVDACFNGDEAHTKFYDNTYQLVILDILLPGMN  60
            M IRILLVEDD+HICN+V+ FL+ AGY+VDAC +G+EA TKFY+NTYQLVILDI+LPGMN
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GHELLREFRKLNNTPVLMMTALSDDENQIRAFDAEADDYVTKPFKIQLLLKRVEALLRRS  120
            GHELLREFR  N+TP+LMMTALSDDENQIRAFDAEADDYVTKPFK+Q+LLKRVEALLRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GAVAKELHYGKLTILPEDFKVFYDDEELLLTLKEFEILMLLVQNNGRTLSHEVILSRVWG  180
            GA+AKE++ G+LT+LPEDF V+ D+ EL LT KEFEIL+LLVQN+GRTL+HE+ILSR+WG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFDGDGSTVHTHIKNLRAKLPDNIIKTVRGVGYRLEET  219
            YDF+GDGSTVHTHIKNLRAKLP+NIIKT+RGVGYRLEE+
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

6) MC28_G291 in NC_018689


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  178 bits (660),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 89/217 (42%), Positives = 155/217 (72%), Gaps = 2/217 (0%)

Query  12   HILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQFNKQSFDLILLDVMMPNLNGFE  71
            +IL+VEDD++I + ++ FL    Y+V   +DG E+  +F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  72   VAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRRSNNQ  131
            + + +R++++ PI+M+TAL ++++Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  132  ITDNHFVFRELHVNGDAYKVYVNKVEVPLTTKEFEILQLLLQNEKKVLTRENIVEKIWGY  191
              + +     L +  + + V  +  E+PLT KEFEIL LL+QN  + LT+E I+ +IWGY
Sbjct  124  AKEIRVG--RLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  192  EYAGDTRMIDTHMKNIRKKLDIPYIKTVKGIGYKIDE  228
            ++ GD   ++TH+KN+R KL    IKT++G+GY+++E
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

7) CBF_2020 in NC_017297


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  171 bits (633),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNAGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

8) CLI_2035 in NC_009699


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  171 bits (633),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNAGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

9) H04402_01993 in NC_017299


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  170 bits (629),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 152/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSISLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF + +L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

10) CLB_1908 in NC_009697


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  170 bits (628),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

11) CBO1968 in NC_009495


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  170 bits (628),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

12) CLC_1914 in NC_009698


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  170 bits (628),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

13) CLM_2186 in NC_012563


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  170 bits (627),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILMSNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

14) CLJ_B2174 in NC_012658


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 154/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKKILVVEDDFDIQTIISEVLKESGYLVEEATDGLMAVEMFREGNFDLIILDVMLPKID  60
            M+ +IL+VEDD +I   +   L E+GY V+  TDG  A   F E  ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMRGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++R+F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYLSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+   ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLSIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL+ + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

15) CLD_2656 in NC_010516


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  169 bits (626),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 96/220 (44%), Positives = 153/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRWNFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+TKPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNAGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

16) CLK_1423 in NC_010520


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 95/220 (44%), Positives = 152/220 (70%), Gaps = 3/220 (1%)

Query  1    MPKRILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFRRGEFDLIILDVMLPKID  60
            M+ RIL+VEDD +I   +   L E+GY V+  TDG  A   F    ++L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYIIKPFSINLLIKRVEAVLRRA  120
            G  +   +R  +  PI+M+TAL+++E+++++F+   DDY+ KPF +++L+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NGLEENNSTLTFEEITIYPSNYKTLVNNKEIELTYKEFQILEILISNVGRVFSRESLLNQ  180
             +L  +   +    +T+ P ++  L +  E+ LT KEF+IL +L+ N GR +++E +L++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYFGDTRVIDTHIKNLRQKLNIDYIKTIRGVGYKIE  220
            IWGYD+ GD   ++THIKNLR KL  + IKTIRGVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

17) Nther_0984 in NC_010718


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  167 bits (619),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 104/242 (43%), Positives = 158/242 (66%), Gaps = 27/242 (11%)

Query  3    RILLVEDEHHIAKLVNHNLIKEGYEVEHVTHGDEAFNKYFENDYDLIILDLMLPGLDGLE  62
            RILLVED++HI + V   L   GY+V+  T+G+EA+ K++EN Y+L+ILD+MLPG++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRKIRGNSSLHIPVIMLTAKSDEIEKIVGLEMGADDYVTKPFSPRELLARVKAQLRGRT  122
            + R +R+++  + P++M+TA SD+ ++I +++  ADDYVTKPF  + LL RV A LR R+
Sbjct  64   LLREFRAKN--DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLR-RS  120

Query  123  KELTDEKSQDNSNKIFDQRDKSEDVKKNGPLSIKPEKYRAYIENQELQLTPKEFELLNIM  182
              L+ E                    + G L++ PE +    +  EL LT KEFE+L ++
Sbjct  121  GALAKEI-------------------RVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLL  161

Query  183  VTNSGQVLTREKLLEKIWGYDFLGDTRTVDVHIRHLRQKISEAGGPPDLVETVRGIGYRL  242
            V N G+ LT+E +L +IWGYDF GD  TV+ HI++LR K+     P +++ T+RG+GYRL
Sbjct  162  VQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYRL  216

Query  243  KE  244
             E
Sbjct  217  EE  218

18) CD630_21140 in NC_009089


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  166 bits (612),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 95/219 (44%), Positives = 150/219 (69%), Gaps = 2/219 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+  GYQVD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF  ++L+KRVEA+LRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
                ++  I   +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLE  219
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

19) CDBI1_10225 in NC_017179


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  166 bits (612),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 95/219 (44%), Positives = 150/219 (69%), Gaps = 2/219 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+  GYQVD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF  ++L+KRVEA+LRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
                ++  I   +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLE  219
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

20) CD196_1978 in NC_013315


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  166 bits (612),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 95/219 (44%), Positives = 150/219 (69%), Gaps = 2/219 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+  GYQVD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF  ++L+KRVEA+LRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
                ++  I   +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLE  219
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

21) CDR20291_2021 in NC_013316


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  166 bits (612),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 95/219 (44%), Positives = 150/219 (69%), Gaps = 2/219 (0%)

Query  1    MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLD  60
            M+  IL++EDD +I + +  FL+  GYQVD+  DG E+  KF + +Y+LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GYGVCKMIRKSSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRS  120
            G  + + +R  +  PI+ +TAL+D+ +Q+++FD E DDY+TKPF  ++L+KRVEA+LRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  NKTINDKFIVFEKLKLDLNTYIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSI  180
                ++  I   +L L  + +    DG  + LT KEF+IL  L+++  + +T+E +L  I
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYYGDTRIVDAHIKNIRKKISLPYIKTVKGIGYTLE  219
            WGYD+ GD   V++HIKN+R K++   IKT++G+GY LE
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

22) LMOSLCC7179_1041 in NC_018593


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  165 bits (611),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 92/218 (43%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHIKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++THIKNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

23) Bcer98_3617 in NC_009674


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  165 bits (608),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 153/219 (70%), Gaps = 4/219 (1%)

Query  3    HILVIEDNPDIQELIREFLTAQNYKVDVAGTGTEGILLFQKNLYDLVLLDVMLPDIDGYS  62
            +IL++ED+ +I + +R FL+   Y+VD    G E+   F  N Y+LV+LD+MLP+++G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   ICKIIRGQSDVPIIMLTGLQNEENEIKGFELGVDDYITKPFHYAIFIKRVEAVLRRAAST  122
            + + +R+++D PI+M+T+L ++EN+I++F+   DDY+TKPF   I++KRVEA+LRR+++ 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EVENANILQFHELMLNSTAYAAYVNGDQVELTTKEFEIIYTLLQNRGKVLSRSDLLNKVW  182
              E    ++   L L +  ++   +G ++ LT KEFEI+  L+QN+G+ L++  +L+++W
Sbjct  124  AKE----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYEHYGDVRVIDTHIKNLRKKLCIPYIKTVKGIGYKIDS  221
            GY+  GD   ++THIKNLR KL    IKT++G+GY+++ 
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

24) LM5923_1097 in NC_013768


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

25) LMRG_00522 in NC_017544


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

26) lmo1060 in NC_003210


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

27) LMLG_2327 in NC_017547


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

28) LMKG_01862 in NC_017546


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

29) LMOG_00660 in NC_017545


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

30) BN418_1278 in NC_020557


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

31) BN419_1275 in NC_020558


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

32) LMOSLCC2372_1074 in NC_018588


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

33) LMOSLCC2479_1073 in NC_018589


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

34) LMOSLCC5850_1066 in NC_018592


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

35) M642_02970 in NC_021823


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

36) M639_12340 in NC_021837


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

37) LM5578_1143 in NC_013766


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 152/218 (70%), Gaps = 3/218 (1%)

Query  3    KILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKETFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  +T++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKPFSYlvllkrvqvllrrvNQS  122
            L   +R+ + TPILMMTALS++++++++FD  ADDY+ KPF    +   ++ +   + +S
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  ETKKQILRCGNISVDTETFEVISAGETIELTKKEFDILVLLIKNQKKVITREMILSQAWD  182
             +  + +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS+ W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

38) CTC00189 in NC_004557


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  163 bits (604),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 154/220 (70%), Gaps = 6/220 (2%)

Query  25   KILIVDDDQNICEVIKMYLESAGFDTRVCHDGKESQSIFIEYNPDLVLLDIMLPSMDGID  84
            +IL+V+DD++IC+ ++ +L  AG++   C DG+E+ + F E   +LV+LDIMLP+M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  85   VLKWIRKEHETPVIMLTAKGETFDKVLGLELGADDYMVKPFEPKELLARVKAVLRRFNSD  144
            +L+ +R  ++TP++M+TA ++  +++ +++  ADDY+ KPF  + LL RV A+LRR  S+
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR--SG  121

Query  145  NVSKEALQFNGLTIDIDSYTVIYNGKEIKMPPKEFELLYYLASNKNRVFTREQLLCEVWG  204
             ++KE ++   LT+  + +TV+ +G E+ +  KEFE+L  L  NK R +T+E +L  +WG
Sbjct  122  ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  205  YDYPGDSRTVDVHIKRLREKLEEGSNWQIETVWGVGYKFE  244
            YD+ GD+ TV+ HIK LR KL E     I T++GVGY++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENI---IKTIRGVGYRLE  217

39) lwe1038 in NC_008555


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  163 bits (604),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 149/218 (69%), Gaps = 3/218 (1%)

Query  3    KILIAEDDVTILGVITAFLTEAGYQVTTAQNGIEAYHFFQKEAFDLIIMDIMMPSMDGYT  62
            +IL+ EDD  I   + AFL+EAGYQV +  +G EAY  F  ++++L+I+DIM+P+M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LTELIRSTSSAPILMMTALSEESDELKGFDLGADDYIQKPFSYlvllkrvqvllrrSNQK  122
            L   +R+ + +PILMMTALS++ +++++FD  ADDY+ KPF    +   ++ +     + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK---MQILLKRVEALLRRS  120

Query  123  EVDKKKLRCGNISVNTETFEVVSAGETIELTKKEFDILVLLIRNQKKVITREMILSQVWD  182
                K +R G +++  E F V+  G  + LT+KEF+IL+LL++N+ + +T+E+ILS++W+
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  FAAIVDTSIINTHMKNLRKKLHTEKIRTIRGAGYKMDE  220
            +    D S ++TH+KNLR KL  + I+TIRG GY+++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

40) OmpR2 in NC_003909


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  163 bits (602),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 93/217 (43%), Positives = 157/217 (73%), Gaps = 2/217 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQQYTVVVASDGLEGMTQFNKQSFDLVLLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++LV+LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VAKMIRSQSNIPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDN  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEvridvdayrvyvddvEIFLTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  D+ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLAIPYIKTIKGIGYKVDE  221
            D+ G+   ++THIKNLR KL+   IKTI+G+GY+++E
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

41) Ilyop_1493 in NC_014632


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  162 bits (597),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 97/216 (45%), Positives = 148/216 (69%), Gaps = 1/216 (0%)

Query  3    KILVVEDEWKMRRLIKDYLVKEGYHVDEAGDGMQALEMFQEGGYDLVILDIMLPKMDGWS  62
            +IL+VED+  +   ++ +L   GY+VD   DG +A   F E  Y+LVILDIMLP M+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCREIRRESMVPVIMLTARSEENDQIFGFELEADEYITKPFNPRLLVARIKAIFRRAGKP  122
            + RE+R  +  P++M+TA S++++QI +F+ EAD+Y+TKPF+ ++L+ R+ A++RR+G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  DKISR-GDIEIDEGSRKVEIKGEAVELTSKEFEMLLYFVQNRGIALSREKILNSVWGWDY  181
             K  R G + +      V   G  + LT KEFE+LL +VQN+G +L++E IL+ +WG D+
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  182  FGDVRTVDTHVKRLRKKIGEIYIQTIRGFGYRFEEG  217
             GD  TV+TH+K LR K+ E  I+TIRG GYR+EE+
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

42) CC1_16950 in NC_021009


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  162 bits (597),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 95/221 (43%), Positives = 155/221 (71%), Gaps = 5/221 (2%)

Query  3    SLKILVVDDESRMRKLVRDFLTKKGFTVIEAGDGEEAVDKFFEVKDIALIILDVMMPKMD  62
            S++IL+V+D+ ++ + VR FL+  G+ V    DG+EA  KF+E +   L+ILD+M+P M+
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYE-NTYQLVILDIMLPGMN  60

Query  63   GWQVCREIRQYSKVPIIMLTAKSDEKDELQGFDLGVDEYITKPFSPKILVARVEAILRRS  122
            G ++ RE+R  +  PI+M+TA SD+ +++++FD   D+Y+TKPF  +IL+ RVEA+LRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  123  NVLAADDTMEAGGIELNKAAHEVLIDGKSVELSYKEFELLAYFMSNQGVALSRERILNNV  182
              LA +  +  G + L      VL DG  + L+ KEFE+L  ++ N+G +L++E IL+ +
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  183  WNYDYFGDARTIDTHVKKLRSKLGAKGEYIKTIWGMGYKFE  223
            W YD+ GD+ T++TH+K+LR+KL    + IKTI+G+GY++E
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

43) Csac_0418 in NC_009437


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  162 bits (598),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 156/219 (72%), Gaps = 7/219 (3%)

Query  4    ILVVEDQQDLNQIITRFLKNEGFEVINSYTAKGALSKLNEA--DLIILDIMLPDMEGYEV  61
            IL+VED++++ + +  FL + G++V     ++ A +K+ E   +L+ILDIMLP+M+G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  62   LKE-ASKKGIPTIILTSKSEEFDKLKGFELGAEDYITKPFSMLELIARVKVVLRRSKNFE  120
            L+E  +K++ P +++T+ S++ +++++F+  A+DY+TKPF M  L+ RV  +LRRS  + 
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  121  ESIKLLDGKVEIFPKRFKVIVDGEDVNLTHKEFELLLFLAKNKDLVKSRDEILEKVWGFD  180
              I++  G++ ++P  F V+ DG ++ LT+KEFE+LL+L +NK+   +++ IL ++WG+D
Sbjct  125  KEIRV--GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  181  FIGETRTVDVHIKQLREKLKDYKFLIKTVWGVGYKLSED  219
            F G+  TV+ HIK+LR KL +   +IKT++GVGY+L E 
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLEES  219

44) CLS_39270 in NC_021047


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  160 bits (590),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 159/220 (73%), Gaps = 4/220 (1%)

Query  3    TLKILVVDDEPRMRKLVKDFLTVKGFQVVEAGDGEEAIDIFFEQKDIALILLDVMMPKMD  62
            +++IL+V+D+ ++ + V+ FL+  G+QV    DG+EA   F+E+    L++LD+M+P M+
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENT-YQLVILDIMLPGMN  60

Query  63   GWEVLKTIRKYSQVPILMLTARGEEQDELQGFKLGVDEYISKPFSPKILVARVEAILRRS  122
            G E+L+ +R  ++ PILM+TA +++++++++F    D+Y++KPF  +IL+ RVEA+LRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  123  SPGAKDVIDVGGIHIDKTAHQVEIDGKPVDLSYKEFELMTYFAENQGIALSREKILNNVW  182
            ++ AK+ I VG + +      V  DG  + L+ KEFE++  + +N+G +L++E IL+ +W
Sbjct  121  GALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  NYDYFGDARTIDTHVKKLRSKLGEKGEYIKTIWGMGYKFE  222
             YD+ GD+ T++TH+K+LR+KL E  + IKTI+G+GY++E
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

45) irr in NC_019425


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  159 bits (587),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 92/221 (42%), Positives = 145/221 (66%), Gaps = 3/221 (1%)

Query  1    MQKRILVVEDDEMTNKVITNFLAEQNFTVFSALDGQAGWDIFQKETLDLIILDIMLPKID  60
            M  RIL+VEDD+   + +  FLAE  + V +  DG+ +   F  +T +L+ILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLALLAQFREVSQIPIIMLTALDDEYTQVVSYSNLIDDYVTKPFSPTILVKRVEAVLRRN  120
            G  LL +FR  ++ PI+M+TAL D+  Q+ ++    DDYVTKPF   IL+KRVEA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  VQEEENSGKIKYGELTIDLDACTVENQSEAVNLTKKEYDIVTQLISRKGKVVTREQLMDQ  180
                  +  I+ G LT+  +  TV  ++  + LT+KE++I+  L+  KG+ +T+E ++ +
Sbjct  121  ---GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  181  IWGYDYNPSDRIIDTHIKNIRKKLPGIEIRTVKGTGYAIEA  221
            IWGYD++  +  ++THIKN+R KLP   I+T++G GY +E 
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

46) SSUD12_1627 in NC_017621


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  159 bits (586),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 147/216 (69%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGD-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDTIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTVVGRGYQIEDT  216
            E D+  ++ HIKN+R KLP   +KT+ G GY++E++
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

47) EUBREC_1462 in NC_012781


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (585),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 94/222 (43%), Positives = 156/222 (71%), Gaps = 6/222 (2%)

Query  3    KIKILVVDDESRMRKLVHDFLAREGYEVLEAGDGEEALDIFYQQKDIALLVLDIMMPRIN  62
             I+IL+V+D+ ++ + V+ FLA  GY+V    DG+EA   FY++    L++LDIM+P +N
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENT-YQLVILDIMLPGMN  60

Query  63   GFEVCREIRQTSKVPIIMLTAKGDERDELNGFDIGADEYISKPFSPKILVARVNALLRRA  122
            G E+ RE+R  +  PI+M+TA +D+ +++ +FD  AD+Y++KPF  +IL+ RV+ALLRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  123  NKLGKEAVISEAGGIVMDKTAHTVAIDGRNIELSVKEFELLDYFMSNQGIALTRERILDS  182
              L+KE  +   G + +     TV  DG ++ L+ KEFE+L  ++ N+G +LT+E IL  
Sbjct  121  GALAKEIRV---GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  183  VWSYDYFGDARTIDTHVKKLRSKMGAKGDYIKTVWGVGYKFE  224
            +W+YD+ GD+ T++TH+K+LR+K+    + IKT++GVGY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

48) SSUA7_1493 in NC_017622


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

49) SSUBM407_1547 in NC_012926


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

50) SSUD9_1668 in NC_017620


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

51) SSGZ1_1492 in NC_017617


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

52) SSUJS14_1631 in NC_017618


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

53) SSU1472 in NC_012925


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

54) YYK_07040 in NC_018526


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

55) NJAUSS_1536 in NC_020526


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

56) SSUSC84_1500 in NC_012924


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

57) SSU12_1607 in NC_017619


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

58) SSUST1_1538 in NC_017950


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

59) SSUST3_1504 in NC_015433


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (584),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 91/216 (43%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KTI G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

60) ROI_10070 in NC_021040


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (585),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 154/224 (69%), Gaps = 6/224 (2%)

Query  3    KIKILVVDDESRMRKLVRDFLVREDYEVLEAGDGETALDIFYQEKNIALIILDVMMPKMN  62
             I+IL+V+D+ ++ + VR FL   +Y+V    DG+ A   FY E+   L+ILD+M+P MN
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFY-ENTYQLVILDIMLPGMN  60

Query  63   GWEVCREIRETSKVPIIMLTAKGDEEDELTGFELGVDEYISKPFSPKILVARVGAILRRI  122
            G E+ RE+R  +  PI+M+TA +D+E+++ +F+   D+Y++KPF  +IL+ RV A+LRR 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  123  GKAPEEGKLLSIGGIVIDQTAHTVTVDGRQIELSFKEFELLTYFMENEGIALSREKILNH  182
            G  + E   + +G + +     TV  DG ++ L+ KEFE+L  +++N G +L++E IL++
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  183  VWNYDYFGDARTIDTHVKKLRAKIGEKGDYIKTIWGMGYKFEAE  226
            +W YD+ GD+ T++TH+K+LRAK+ E  + IKTI+G+GY++E  
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEES  219

61) CHY_1413 in NC_007503


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 151/220 (69%), Gaps = 7/220 (3%)

Query  4    ILLVDDEEKIREVLRLYLEKEGFLVLEAQDGKEALKRFSEHKIDLIILDLMLPEIDGMEI  63
            ILLV+D++ I + +R +L   G+ V    DG+EA  +F E+  +L+ILD+MLP ++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   AKEIRKTSLVPIIMLTARGEEIDKILGLEIGADDYVVKPFSPREVVARVKAVLRRSSGIP  123
             +E+R  +  PI+M+TA +++ ++I +++  ADDYV KPF  + ++ RV A+LRRS++++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  124  EKEASSVIKQGILEIHPEAREVKVNGEEVVLTPLEFDLLLYLVTNRGKALSREQLLANVW  183
                   I+ G L + PE   V  +G E+ LT  EF++LL LV N+G++L++E +L+ +W
Sbjct  125  KE-----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  184  GYDYFGEARTVDTHVTRLREKLQEAASYIKTVWGVGYKFE  223
            GYD+ G++ TV+TH+  LR KL E    IKT++GVGY++E
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLE  217

62) TL13_1456 in NC_021213


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  158 bits (583),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 146/216 (68%), Gaps = 2/216 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQVPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGAILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKLPSLPLKTVVGRGYQIEGT  216
            E D+  ++ HIKN+R KLP   +KT+ G GY++E +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

63) Exig_2177 in NC_010556


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  157 bits (581),  Expect = 4e-40, Method: Compositional matrix adjust.
 Identities = 89/217 (42%), Positives = 150/217 (70%), Gaps = 1/217 (0%)

Query  3    HILIAEDEFDIRELLTELLESSGYHVTSAANGMEALKLHQSATFDLMILDIMMPYLDGFE  62
            +IL+ ED+ +I + +  +L  +GY+V + ++G EA       T++L+ILDIM+P ++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VAQQVRKTSQTPIIFLTALQDEDNQVKGFDLGIDDYIAKPFSLRILLRRIEAVIRRIRTN  122
            + ++ R  ++TPI+ +TAL D++NQ+++FD   DDY++KPF ++ILL+R+EA++RR    
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  123  DEEQLSFREITLFPASYNVLISGNAVILTLKEFQILHLLLENPGRVLEREQLIQQLWGFD  182
               ++    +TL+P  + VL  G  + LT KEF+IL LL++N GR L +E ++ ++WG+D
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  AFGDTRFLDTHIKNLRKKINVPYIQTVKGVGYKLEAT  219
              GD   ++THIKNLR K+    I+T++GVGY+LE +
Sbjct  183  FEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

64) SSA_0896 in NC_009009


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 95/213 (45%), Positives = 149/213 (70%), Gaps = 2/213 (0%)

Query  3    KILVVEDDTTINQVICEFLKESQYEVRPVFDGGDALQAFEEEPFDLVILDMMLPTKSGLE  62
            +IL+VEDD  I + +  FL E+ Y+V +  DG +A   F E+ ++LVILD+MLP  +G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPVMILTALDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRN-TV  121
            +L+E+R  ++ P++++TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LRR+ ++
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  ASEIAVGDLTVSIDDCTVYWQGEKMPLTKKEYEILQTLAKRKGHLVTRDQLMNTIWGYS-  180
            A EI VG LT+  +D TV  +G  +PLT+KE+EIL  L + KG+ +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKIPGVPLKTITGMGYQL  213
            E D+  ++ HIKN+R K+P   +KTI G+GY+L
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

65) CXIVA_02810 in NC_015737


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  157 bits (578),  Expect = 6e-40, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 151/223 (68%), Gaps = 5/223 (2%)

Query  3    KLKILVVDDEARMRKLVRDFLVRSNFEVIEAGDGEEALDLFYSEKDIALVILDIMMPKID  62
             ++IL+V+D+ ++ + VR FL  + ++V    DG+EA   FY E+   LVILDIM+P ++
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFY-ENTYQLVILDIMLPGMN  60

Query  63   GWGVCREIRESSKVPIIMLTAKGDESDELNGFDMGADEYISKPFSPKILVARVSALLRRS  122
            G  + RE+R  +  PI+M+TA +D+ +++ +FD  AD+Y++KPF  +IL+ RV ALLRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  123  NKLDPDETLEAGGIVLNKAAHTVTIDGQTVDMSFKEFELLTYFMENAGIALSREKILNSV  182
              L  +  +  G + L     TV  DG  + ++ KEFE+L  +++N G +L++E IL+ +
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  183  WNYDYFGDARTIDTHVKKLRNKMGEKGTYIKTIWGMGYKFEAA  225
            W YD+ GD+ T++TH+K+LR K+ E+   IKTI+G+GY++E +
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLEES  219

66) RHOM_13295 in NC_015977


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 94/218 (44%), Positives = 152/218 (70%), Gaps = 4/218 (1%)

Query  4    ILVVEDDIDIQEILNNYLTDAGYKVIIASDGVAGIAKF-NSEIDLVLLDIMLPKIDGYGV  62
            IL+VEDD +I + +  +L++AGY+V   +DG  + +KF ++  +LV+LDIMLP ++G  +
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  63   CEVIRQKSKVPIIMLTALSDEENQLRGFEQQIDDYIPKPFSPKILLCKIAAILRRGLQdn  122
               +R K+  PI+M+TALSD+ENQ+R+F+ + DDY+ KPF  +ILL ++ A+LRR+    
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS---G  121

Query  123  idkdiiiykdLRMDIEGFHLYCKEQEVILTQKEFDLLRLLLENQGRVFTRQMLLDRLWDF  182
                 I    L +  E+F + C   E+ LT+KEF++L LL++N+GR +T++++L R+W++
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  183  DTYVEDRIVDSHIKNLRKKLNVDYIETIRGVGYRIDKS  220
            D   ++  V++HIKNLR KL  + I TIRGVGYR++ S
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

67) BBR47_41940 in NC_012491


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 92/218 (43%), Positives = 144/218 (67%), Gaps = 5/218 (2%)

Query  4    IMVVDDDPHIRELVSVFLRNEGFTIVEAVDGQEALDKLESVAAQLVILDIMMPNMDGWEL  63
            I++V+DD HI + V  FL + G+ +    DG+EA  K+   + QLVILDIM+P M+G EL
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   CRKLREHYDFPLLMLTAKGETSQKIKGFELGTDDYLVKPFDPQELVVRVKALLKRYRIAA  123
             R +R   D P+LM+TA ++  ++I++F+  +DDY+ KPF  Q L+ RV ALL+R   A 
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  124  SHQVQAGKLILDRKTFAVASGTKTWTIPLKEFEMLFKLASYPGQTISREQLIEQIWGYDF  183
            + +++ G+L L    F+V  +     +  KEFE+L+ L    G+T+++E ++ +IWGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  184  EGNERTVDVHINRLRERFPEAMYGFLIRTVRGLGYRLE  221
            EG+  TV+ HI+ LR ++PE +    I+T+RG+GYRLE
Sbjct  184  EGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

68) BCG9842_B2563 in NC_011772


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 144/201 (72%), Gaps = 2/201 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLA  205
            D+ G+   ++THIKNLR KL+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP  202

69) vanRB in NC_018877


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 144/201 (72%), Gaps = 2/201 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLA  205
            D+ G+   ++THIKNLR KL+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP  202

70) BTG_06080 in NC_018500


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 144/201 (72%), Gaps = 2/201 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLA  205
            D+ G+   ++THIKNLR KL+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP  202

71) BTF1_11125 in NC_018508


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 144/201 (72%), Gaps = 2/201 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLA  205
            D+ G+   ++THIKNLR KL+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP  202

72) CT43_CH2706 in NC_017208


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 144/201 (72%), Gaps = 2/201 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLA  205
            D+ G+   ++THIKNLR KL+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP  202

73) H175_ch2755 in NC_020376


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 144/201 (72%), Gaps = 2/201 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLA  205
            D+ G+   ++THIKNLR KL+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP  202

74) HD73_3280 in NC_020238


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 144/201 (72%), Gaps = 2/201 (0%)

Query  5    HILVVEDDQEIQELIKQFLMTQHYTVIVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  125  NVNNHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGY  184
             + +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  DYFGETRIIDTHIKNLRKKLA  205
            D+ G+   ++THIKNLR KL+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP  202

75) I872_02985 in NC_021175


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 93/213 (44%), Positives = 149/213 (70%), Gaps = 2/213 (0%)

Query  3    KILVVEDDTTINQVICEFLKESNYAVTPVFDGGEALLQFEAESFDLVILDMMLPTMSGLD  62
            +IL+VEDD  I + +  FL E+ Y V +  DG EA  +F  ++++LVILD+MLP M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPVMILTALDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRN-TV  121
            +L+E+R  ++ P++++TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LRR+ ++
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  ASEITVGELTVSIDDCTVYWQEEKMPLTKKEYEILQALAKRKDHLVTRDQLMNTIWGYS-  180
            A EI VG LT+  +D TV  +   +PLT+KE+EIL  L + K++ +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKIPGIPLKTITGMGYQL  213
            E D+  ++ HIKN+R K+P   +KTI G+GY+L
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

76) BcerKBAB4_2424 in NC_010184


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 145/206 (71%), Gaps = 12/206 (5%)

Query  5    HILVVEDDQEIQELIKQFLMTQQYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFE  64
            +IL+VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VSKMIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDK  124
            + + +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS---  120

Query  125  NVNNHLVFKEVRID-----VDAYRVYVNDVEILLTIKEFEILQLLFQNERKVLTRENIVE  179
                 L  KE+R++      + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ 
Sbjct  121  ---GALA-KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  180  KVWGYDYFGETRIIDTHIKNLRKKLA  205
            ++WGYD+ G+   ++THIKNLR KL+
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLP  202

77) Cbei_4103 in NC_009617


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 96/226 (43%), Positives = 153/226 (68%), Gaps = 14/226 (6%)

Query  1    MDIKILIAEDDNIFRDLVCDIVR----KEGYMPIEAC-DGEEAINMFFNNNDIDLVILDV  55
            M I+IL+ EDD    D +C+ VR      GY  ++AC DG+EA   F++N   +LVILD+
Sbjct  1    MSIRILLVEDD----DHICNTVRAFLAEAGY-QVDACTDGNEAYTKFYENT-YQLVILDI  54

Query  56   MMPVYDGWEVLKEIREKSEVPIIMLTALGDEKHEVLGLKKGADDYIGKPFSYEIFVARLN  115
            M+P  +G E+L+E+R K++ PI+M+TAL+D+ +++ ++   ADDY+ KPF  +I++ R++
Sbjct  55   MLPGMNGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVE  114

Query  116  NIVKKVKKKFSDEIAVGNLRIYQRTHKVVIDDEEIKLNPKEYNLLLYLVGNINTVLSREQ  175
             ++++    ++ EI VG L +      V+ D+ E+ L  KE+++LL LV N    L++E 
Sbjct  115  ALLRR-SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  176  ILDKVWGYNFDGDIRTIDTHIKTLRAKLSEQGDWIKTIRGSGYMFE  221
            IL ++WGY+F+GD  T++THIK LRAKL+E+   IKTIRG GY +E
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLE  217

78) SGO_1417 in NC_009785


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 92/216 (43%), Positives = 152/216 (71%), Gaps = 2/216 (0%)

Query  3    KILVVEDDTTINQVICEFLKESNYSVTPVYDGAEALRQFEEETFDLVILDMMLPSVSGLD  62
            +IL+VEDD  I + +  FL E+ Y V +  DG EA  +F E+T++LVILD+MLP+++G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPVMILTALDDEYTQLVSFNHLISDYVTKPFSPLILVKRIENILRRTAVY  122
            +L+E+R  ++ P++++TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LRR++  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  S-EIVIGDLRVVLEDCTIFWQGEKLALTKKEYEILEVLAKRKGHLVTRDQLMNTIWGYS-  180
            + EI +G L ++ ED T++ +G  L+LT+KE+EIL +L + KG+ +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKNIRKKVPGIPLSTITGMGYQLGGD  216
            E D+  ++ HIKN+R K+P   + TI G+GY+L   
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

79) phoP in NC_014019


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 97/234 (42%), Positives = 155/234 (67%), Gaps = 15/234 (6%)

Query  1    MSKKLLVVDDEQSISTLLQYNLQQAGFTVETAEDGEEGYNKALEGKPDLIVLDLMLPKMD  60
            MS ++L+V+D++ I   ++  L +AG+ V++  DG+E+Y K  E   +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKKLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R  K  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TQIIAQENEQEEDGERIMIGDLKILPDHYEAYFNQEQLELTPKEFELLLYLAKYKGRVLT  180
            +  +A+E         I +G L +LP+++    +  +L LT KEFE+LL L + KGR LT
Sbjct  120  SGALAKE---------IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RDQLLSAVWNYDFAGDTRIVDVHISHLREKIEQNTRKPVYIKTIRGLGYKLEEP  234
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

80) BTG_10940 in NC_018500


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (573),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 87/217 (41%), Positives = 150/217 (70%), Gaps = 2/217 (0%)

Query  5    HILVVENNPKAQKSIKLSLLKQHYTVETAENGIEGLKLFSEKTFDLVLLDVLMPYLNGFE  64
            +IL+VE++    ++++  L    Y V++  +G E+   F E+T++LV+LD+++P +NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VAKIIRKQSPVPIIMLTALIDEQNQIRGFNLGIDDYITKPFSYRILISRIQAVLKRSNTR  124
            + + +R ++  PI+M+TAL D++NQIR+F+   DDY+TKPF  +IL+ R++A+L+RS + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA-  122

Query  125  IMENHLIFKEIHLICDIYKVLVDKNEVMLTKTEFEILQILIRNERKVLTRGQILQEIWGY  184
             + +++    + L+ + + VL D  E+ LT+ EFEIL +L++N  + LT+  IL  IWGY
Sbjct  123  -LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  185  NYYGDTKLVDTHIKNIRRKLKVPYIKTINGIGYKMDN  221
            ++ GD   V+THIKN+R KL    IKTI G+GY++++
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

81) Ilyop_0701 in NC_014632


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (572),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 147/218 (68%), Gaps = 2/218 (0%)

Query  1    MDKKILLAEDDWKLRRIASDFLKKEGYLVIEAEDGEQAIEFFFNNKIDLVILDIMMPKLD  60
            M  +ILL EDD  +      FL   GY V    DG++A   F++N  +LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWDVCREIRSERKNVPIIMLTAKGDEDDILKGYKLKTDEYVTKPVSLKILMAKVKALLRR  120
            G ++ RE+R+ +++ PI+M+TA +D+++ ++++   +D+YVTKP  ++IL+ +V ALLRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  NNN-DSIINMGKLIINDSSHVVTLDGEILELSPREYEMLLYFVINKGIALSREKIITSLW  179
            +      I +G+L +      V  DG  L L+ +E+E+LL +V NKG +L++E I++ +W
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  180  GYDYEGDRRAVDSQIKRIRKKLGGEYIETVRGVGYKFE  217
            GYD+EGD  +V+++IK +R KL  + I T+RGVGY++E
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

82) mprA3 in NC_017542


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (570),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 94/219 (43%), Positives = 142/219 (65%), Gaps = 5/219 (2%)

Query  3    RVLVVDDDPHIRELVGHFLRLEGLEVVEAVDGLDAMRLFDETKVDLLVLDIMMPGMDGWE  62
            R+L+V+DD HI + V  FL   G +V    DG +A   F E   +L++LDIM+PGM+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRKLREQTDLPLLMLTAKGETSQIVKGFALGTDDYLVKPFDPMVLVARVKALLKRYRIM  122
            L R +R + D P+LM+TA ++  + +++F   +DDY+ KPF   +L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  ASKSVTIGDLVLRSDTFECQAGEQGITLPRKEFELLFKLASYPGKTFTRDHLIEQIWGYD  182
            A K + +G L L ++ F    +   + L RKEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  A-KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YEGDERTVDVHIKRLRERFPEATQSFAIRTIRGLGYRLE  221
            +EGD  TV+ HIK LR ++PE      I+TIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

83) PPSC2_c2313 in NC_014622


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  155 bits (570),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 94/219 (43%), Positives = 142/219 (65%), Gaps = 5/219 (2%)

Query  3    RVLVVDDDPHIRELVGHFLRLEGLEVVEAVDGLDAMRLFDETKVDLLVLDIMMPGMDGWE  62
            R+L+V+DD HI + V  FL   G +V    DG +A   F E   +L++LDIM+PGM+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRKLREQTDLPLLMLTAKGETSQIVKGFALGTDDYLVKPFDPMVLVARVKALLKRYRIM  122
            L R +R + D P+LM+TA ++  + +++F   +DDY+ KPF   +L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  ASKSVTIGDLVLRSDTFECQAGEQGITLPRKEFELLFKLASYPGKTFTRDHLIEQIWGYD  182
            A K + +G L L ++ F    +   + L RKEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  124  A-KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YEGDERTVDVHIKRLRERFPEATQSFAIRTIRGLGYRLE  221
            +EGD  TV+ HIK LR ++PE      I+TIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

84) phoP in NC_014103


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 97/234 (42%), Positives = 155/234 (67%), Gaps = 15/234 (6%)

Query  1    MSKKLLVVDDEQSISTLLQYNLQQAGFTVETAEDGEEGYNKALEGKPDLIVLDLMLPKMD  60
            MS ++L+V+D++ I   ++  L +AG+ V++  DG+E+Y K  E   +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKKLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R  K  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TQIIAQENEQEEDGERIMIGDLKILPDHYEAYFNQEQLELTPKEFELLLYLAKYKGRVLT  180
            +  +A+E         I +G L +LP+++    +  +L LT KEFE+LL L + KGR LT
Sbjct  120  SGALAKE---------IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RDQLLSAVWNYDFAGDTRIVDVHISHLREKIEHNTRKPVYIKTIRGLGYKLEEP  234
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

85) phoP in NC_017138


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 97/234 (42%), Positives = 155/234 (67%), Gaps = 15/234 (6%)

Query  8    MSKKLLVVDDEQSISTLLQYNLQQAGFTVETAEDGEEGYNKALEGKPDLIVLDLMLPKMD  67
            MS ++L+V+D++ I   ++  L +AG+ V++  DG+E+Y K  E   +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  68   GIEVCKKLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  127
            G E+ + +R  K  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  128  TQIIAQENEQEEDGERIMIGDLKILPDHYEAYFNQEQLELTPKEFELLLYLAKYKGRVLT  187
            +  +A+E         I +G L +LP+++    +  +L LT KEFE+LL L + KGR LT
Sbjct  120  SGALAKE---------IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  188  RDQLLSAVWNYDFAGDTRIVDVHISHLREKIEHNTRKPVYIKTIRGLGYKLEEP  241
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

86) RTO_22280 in NC_021015


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  154 bits (567),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 89/219 (41%), Positives = 156/219 (72%), Gaps = 5/219 (2%)

Query  5    KILVVDDESRMRKLVKDFLTREGYMVLEAGDGMEAMDLFYEDKDIALIILDVMMPKMDGW  64
            +IL+V+D+ ++ + V+ FL+  GY V    DG EA   FYE+    L+ILD+M+P M+G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENT-YQLVILDIMLPGMNGH  62

Query  65   QVCREVRETSKVPIIMLTARSEERDELQGFELGVDEYISKPFSPKILVARVNAILRRTLG  124
            ++ RE R  +  PI+M+TA S++ +++++F+   D+Y++KPF  +IL+ RV+A+LRR+ G
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS-G  121

Query  125  AVGNDSLEAGGITIDKSAHIVKIDGTPVELSYKEFELLTYFIENQGIALSREKILNNVWN  184
            A++++ +  G +T+      V  DGT + L+ KEFE+L  +++N+G +L++E IL+ +W 
Sbjct  122  ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  185  YDYFGDARTIDTHVKKLRSKLGDKGEYIKTIWGMGYKFE  223
            YD+ GD+ T++TH+K+LR+KL +  + IKTI+G+GY++E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

87) RHOM_11290 in NC_015977


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 149/222 (68%), Gaps = 6/222 (2%)

Query  3    KIRILVVDDESRMRKLVRDFLVREGYEVLEAGDGEEALDLFYREKDIALIILDVMMPKRN  62
             IRIL+V+D+ ++ + VR FL   GY+V    DG+EA   FY E+   L+ILD+M+P  N
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFY-ENTYQLVILDIMLPGMN  60

Query  63   GFEVCREIRETSKVPIIMLTAKGEESDELNGFELGVDEYISKPFSPKILVARVGAILRRS  122
            G E+ RE+R  +  PI+M+TA +++ +++ +F+   D+Y++KPF  +IL+ RV A+LRRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  123  GKTQDEEAAVSMGGIVLDKAAHMVTVDGERIDLSYKEFELLAYFMENAGIALSREKILNS  182
            G    E   + +G + L      V  DG  + L+ KEFE+L  +++N G +L++E IL+ 
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  183  VWNYDYFGDARTIDTHVKKLRAKMGDKGKYITTVWGMGYKFE  224
            +W YD+ GD+ T++TH+K+LRAK+ +  + I T++G+GY++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

88) MC28_1918 in NC_018693


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  153 bits (564),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 81/198 (41%), Positives = 141/198 (72%), Gaps = 2/198 (1%)

Query  1    MVEDDQEIQELIKQFLMTQHYTVVVASDGLEGMTQFNKQSFDLILLDVMMPNLNGFEVSK  60
            +VEDD++I + ++ FL    Y V   +DG E+ T+F  ++++L++LD+M+P +NG E+ +
Sbjct  7    LVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLR  66

Query  61   MIRSQSNVPIIMLTALEEEEDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRRSYDKNVN  120
             +R++++ PI+M+TAL ++E+Q+++FD   DDY+TKPF  ++L++RVEA+LRRS    + 
Sbjct  67   EFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--GALA  124

Query  121  NHLIFKEVRIDVDAYRVYVNDVEIILTTKEFEILQLLFQNERKVLTRENIVEKVWGYDYF  180
            +++    + +  + + V  ++ E+ LT KEFEIL LL QN  + LT+E I+ ++WGYD+ 
Sbjct  125  KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFE  184

Query  181  GETRIIDTHIKNLRKKLA  198
            G+   ++THIKNLR KL+
Sbjct  185  GDGSTVHTHIKNLRAKLP  202

89) Ilyop_2523 in NC_014633


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  150 bits (554),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 100/219 (46%), Positives = 162/219 (74%), Gaps = 4/219 (1%)

Query  3    RILLLEDEDKMRKVVKNFLVKAGYEVIEAC-DGEEALELFYENTFDLAILDVMVPKIDGW  61
            RILL+ED+D + + V+ FL  AGY+V +AC DG+EA   FYENT++L ILD+M+P ++G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQV-DACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  62   TICRKIRKESKIPIIMLTARSTEDDELFGFDLGADEYITKPFSlkillarvkvllkrkDT  121
             + R +R  +  PI+M+TA S +++++ +FD  AD+Y+TKPF ++ILL RV  LL+R ++
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  122  KTEENSLKVGKLEIDSSSHRVIFFDEILDLTPKEYDMLLMMVENKDIAISRERFLNQIWG  181
             + E  ++VG+L + +    V+  +  L LT KE+++LL++V+NK+ ++++E +L++IWG
Sbjct  123  LAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  182  FDYYGDLRTVDTHVKQLRKKLKGKHIKTVRGVGYRFEEE  220
            +D+ GD  TV+TH+K+LR KL  + IKT+RGVGYR+EE 
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

90) TherJR_2641 in NC_014152


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  150 bits (552),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 90/218 (42%), Positives = 151/218 (70%), Gaps = 5/218 (2%)

Query  5    KILIADDEARMRKLVADFLKKEGYAIIEAADGRQALDLFYGNNDIDLIILDVMMPGYDGW  64
            +IL+ +D+ ++ + V  FL   GY +   +DG +A   FY +N  +L+ILD+M+PG +G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFY-ENTYQLVILDIMLPGMNGH  62

Query  65   TVCREIRKSSQVPIIMLTARGEESDELFGFDLGADEYIAKPFSLKILAARIQALLRRVQN  124
             + RE+R  ++ PI+M+TA +++ +++ +FD  AD+Y++KPF ++IL  R++ALLRR   
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  125  -NRTVRSFDGLEIDEQGRYVYVDGEPVDLSPKEFELLLYLTENAGRALSREQILNAVWDY  183
              + +R  + L +  ++  V  DG  + L+ KEFE+LL L +N GR+L++E IL+ +W+Y
Sbjct  123  LAKEIRV-GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  184  DYFGDVRTVDTHIKKLRLKLGEKSYLIQTVRGLGYRFE  221
            D+ GD  TV+THIK+LR KL E+  +I+T+RG+GYR+E
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

91) HPL003_10930 in NC_016641


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  150 bits (551),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 151/225 (68%), Gaps = 6/225 (2%)

Query  1    MNKRILLVEDEIRIREVIADYFKQNNWEVYEADNGKDALIWFDSVQPDLVILDIMMPELD  60
            M+ RILLVED+ +I + +  ++ +   +V    +G++A   F     +LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWEVCRQVRSRSGVPIILLTAKSGDDDKILGFELGADDYVTKPFSPKVLIARANALMKRV  120
            G E+ R+ R++++ PI+++TA S+D+++I +F+  ADDYVTKPF  ++L+ R +AL++R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  EGHVLPESHVLRFGTAILNTMAHRLEVDQAEVELTPKEYELLRLLIHNKGMVISRDVILS  180
             +     +  +R G   L      +  D +E+ LT KE+E+L LL++NKG  +++++ILS
Sbjct  121  GAL----AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  RVWGIDFEGDTRVVDTHIKKLRSKLGRESRHIRTVFGTGYRFEEE  225
            R+WG DFEGD   V+THIK+LR+KL  +   I+T+ G GYR+EE 
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

92) BpOF4_06195 in NC_013791


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 93/227 (41%), Positives = 143/227 (63%), Gaps = 11/227 (4%)

Query  3    EIRILIVEDEAPMRELLQLYLRKEGYVVDEAITGIEALEKVEKTLYSVVLLDVMMPEMDG  62
             IRIL+VED+  + + ++ +L   GY VD    G EA  K     Y +V+LD+M+P M+G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  63   FEVCREIRKVSQVPVIMLTARTQTLDKVKGLKIGADDYLTKPFEQEELLARVEAVLRRYG  122
             E+ RE+R  ++ P++M+TA ++  ++++++   ADDY+TKPF  + LL RVEA+LRR G
Sbjct  62   HELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  123  VSEPESRGNTLFFKGLVMKRNAYQVYYNEEELSLTPKEFAILELFLLNKNRVFSRDDILE  182
                E R        L +  + + V  +  EL+LT KEF IL L++ NK R ++++ IL 
Sbjct  122  ALAKEIRVGR-----LTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  LVWGYDFIGDYRGVDTHVKHLRDKLTEAGISGRSVIKTVWGVGYKLG  229
             +WGYDF GD   V+TH+K+LR KL E      ++IKT++GVGY+L 
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPE------NIIKTIRGVGYRLE  217

93) GYMC52_0823 in NC_014915


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 148/221 (67%), Gaps = 5/221 (2%)

Query  3    RILVVDDDAHIRELVSHFLSLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  62
            RIL+V+DD HI + V  FL+  G+ ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRELRDYDDVPILMLTAKGETKQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIT  122
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  123  TSQIVQIGHLSLNRKTYECRLGDQEITLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  182
             ++ +++G+L+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YEGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEAC  223
            +EGD  TV+ HIK LR ++++      I+TIRG+GYRLE  
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

94) GYMC61_1696 in NC_013411


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 148/221 (67%), Gaps = 5/221 (2%)

Query  3    RILVVDDDAHIRELVSHFLSLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  62
            RIL+V+DD HI + V  FL+  G+ ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRELRDYDDVPILMLTAKGETKQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIT  122
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  123  TSQIVQIGHLSLNRKTYECRLGDQEITLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  182
             ++ +++G+L+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YEGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEAC  223
            +EGD  TV+ HIK LR ++++      I+TIRG+GYRLE  
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

95) SFUL_3399 in NC_021177


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  149 bits (549),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 150/225 (67%), Gaps = 12/225 (5%)

Query  23   RVLVVDDDPTVAEVVVGYLHRAGYAVERAGDGPAALERFAAARPDLVVLDLMLPAMDGFE  82
            R+L+V+DD  + + V ++L  AGY V+   DG  A  +F     +LV+LD+MLP+M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  83   VCRRMRAHGPVPVIMLTARGDEEDRILGLETGADDYVTKPFSPRELVLRVESVLRRAGAG  142
            + R  RA    P++M+TA +D+E++I ++++ ADDYVTKPF  + L+ RVE++LRR+GA 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  143  TPAAEEARPLSGAGLRLDPVARSASRDGAGLALTLREFDLLAFLLRHPGRAFGREELMRE  202
            +     +R      L L P   +   DG+ L+LT +EF++L +L+++ GR++ +E ++  
Sbjct  124  AKEIRVGR------LTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  203  VWGWDF-GDLSTVTVHIRRLRGKVEQDPARPRLIRTVWGVGYRLD  246
            +WG DF GD STV  HI+ LR+K+ ++     +I+T++GVGYRL+
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

96) GTNG_0792 in NC_009328


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  149 bits (550),  Expect = 9e-38, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 148/220 (68%), Gaps = 5/220 (2%)

Query  5    RILVVDDDAHIRELVSHFLSLEGLTIHEAANGKEALDVLETTKVDLVIMDIMMPEMDGWE  64
            RIL+V+DD HI + V  FL+  G  ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   LCRELRDYDDVPILMLTAKGETREKVKGFSLGADDYLVKPFDPLELVARVKALLKRYRIA  124
            L RE+R  +D PILM+TA ++  +++++F   ADDY+ KPF    L+ RV ALL+R   A
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  125  TSQIVQIGHLSLNRKTYECRLGDVEVPLPPKEFELLFQLASYPGKTFTRDELIEQIWGYD  184
             ++ +++G+L+L    +    ++ E+PL  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  YEGDERTVDVHIKRLRERFAQPNVPFFIRTIRGLGYRLEA  224
            +EGD  TV+ HIK LR ++++     +I+TIRG+GYRLE 
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

97) GC56T3_2648 in NC_014206


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 147/220 (67%), Gaps = 5/220 (2%)

Query  5    RILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  64
            RIL+V+DD HI + V  FL   G+ ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   LCRELRDYDDVPILMLTAKGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIA  124
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R   A
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  125  TSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  184
             ++ +++GRL+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  YDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEA  224
            ++GD  TV+ HIK LR ++++      I+TIRG+GYRLE 
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

98) GK0908 in NC_006510


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 147/220 (67%), Gaps = 5/220 (2%)

Query  3    RILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  62
            RIL+V+DD HI + V  FL   G+ ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRELRDYDDVPILMLTAKGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIA  122
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R   A
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  123  TSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  182
             ++ +++GRL+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEA  222
            ++GD  TV+ HIK LR ++++      I+TIRG+GYRLE 
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

99) GTCCBUS3UF5_10780 in NC_016593


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 147/220 (67%), Gaps = 5/220 (2%)

Query  3    RILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWE  62
            RIL+V+DD HI + V  FL   G+ ++  ++G+EA   +     +LVI+DIM+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRELRDYDDVPILMLTAKGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIA  122
            L RE+R  +D PILM+TA ++  +++++F+  ADDY+ KPF    L+ RV ALL+R   A
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  123  TSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFKLASYPGKTFTRDELIEQIWGYD  182
             ++ +++GRL+L    +    ++ E+ L  KEFE+L+ L    G+T+T++ ++ +IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  YDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEA  222
            ++GD  TV+ HIK LR ++++      I+TIRG+GYRLE 
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEE  218

100) phoP in NC_006270


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 96/236 (41%), Positives = 154/236 (66%), Gaps = 17/236 (7%)

Query  1    MSKKILVVDDEESIVTLLKYNLERSGYHVVTAMDGEAGLLKAIEEKPDLIVLDLMLPKMD  60
            MS +IL+V+D++ I   ++  L  +GY+V +  DG+ +  K  E+  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKELRQKKLMYPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVTARVKAILRR  120
            G E+ +E+R K+   PILM+TA  D+ +++ +++  ADDY+TKPF  + +  RV A+LRR
Sbjct  61   GHELLREFRAKNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TQTLSVQPEETEEPDAGELIIGELKILPEHYEVYFQNERLELTPKEFELLLYLGRHKGRV  180
            + +L           A E+ +G L +LPE++ V  +   L LT KEFE+LL L ++KGR 
Sbjct  120  SGAL-----------AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRT  168

Query  181  LTRDLLLNAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPEYIKTIRGLGYKMEEP  236
            LT++++L+ +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY++EE+
Sbjct  169  LTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

101) phoP2 in NC_006322


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  148 bits (544),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 96/236 (41%), Positives = 154/236 (66%), Gaps = 17/236 (7%)

Query  1    MSKKILVVDDEESIVTLLKYNLERSGYHVVTAMDGEAGLLKAIEEKPDLIVLDLMLPKMD  60
            MS +IL+V+D++ I   ++  L  +GY+V +  DG+ +  K  E+  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKELRQKKLMYPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVTARVKAILRR  120
            G E+ +E+R K+   PILM+TA  D+ +++ +++  ADDY+TKPF  + +  RV A+LRR
Sbjct  61   GHELLREFRAKNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TQTLSVQPEETEEPDAGELIIGELKILPEHYEVYFQNERLELTPKEFELLLYLGRHKGRV  180
            + +L           A E+ +G L +LPE++ V  +   L LT KEFE+LL L ++KGR 
Sbjct  120  SGAL-----------AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRT  168

Query  181  LTRDLLLNAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPEYIKTIRGLGYKMEEP  236
            LT++++L+ +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY++EE+
Sbjct  169  LTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

102) phoP in NC_021362


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 96/236 (41%), Positives = 154/236 (66%), Gaps = 17/236 (7%)

Query  1    MSKKILVVDDEESIVTLLKYNLERSGYHVVTAMDGEAGLLKAIEEKPDLIVLDLMLPKMD  60
            MS +IL+V+D++ I   ++  L  +GY+V +  DG+ +  K  E+  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKELRQKKLMYPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVTARVKAILRR  120
            G E+ +E+R K+   PILM+TA  D+ +++ +++  ADDY+TKPF  + +  RV A+LRR
Sbjct  61   GHELLREFRAKNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TQTLSVHPEETEEPDAGELIIGELKILPEHYEVYFQNERLELTPKEFELLLYLGRHKGRV  180
            + +L           A E+ +G L +LPE++ V  +   L LT KEFE+LL L ++KGR 
Sbjct  120  SGAL-----------AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRT  168

Query  181  LTRDLLLNAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPEYIKTIRGLGYKMEEP  236
            LT++++L+ +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY++EE+
Sbjct  169  LTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

103) SAIN_0610 in NC_022244


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 144/213 (68%), Gaps = 2/213 (0%)

Query  3    KILVVEDDTTINQVICEFLKENHYEVTPVFDGAEALREFEEKSFDLIILDVMLPSMSGLD  62
            +IL+VEDD  I + +  FL E  Y+V +  DG EA   F E++++L+ILD+MLP+M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQVPVMMLTALDDEYTQLVSFNHLISDYVTKPFSPLILMKRIENIFRSTVT-  121
            +L+E+R  ++ P++M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E ++R + + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  ESEIVVGDLRVSIDDCTVYWQEEKMSPTKKEYEIIQALAKRKNHLVTRDQLMNTIWGYS-  180
              EI VG L +  +D TV  +   ++ T+KE+EI+  L + K + +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHVKNIRKKIPGIPLKTITGMGYQL  213
            E D+  ++ H+KN+R K+P   +KTI G+GY+L
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

104) SANR_0619 in NC_022239


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 144/213 (68%), Gaps = 2/213 (0%)

Query  3    KILVVEDDTTINQVICEFLKENHYEVTPVFDGAEALREFEEKSFDLIILDVMLPSMSGLD  62
            +IL+VEDD  I + +  FL E  Y+V +  DG EA   F E++++L+ILD+MLP+M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQVPVMMLTALDDEYTQLVSFNHLISDYVTKPFSPLILMKRIENIFRSTVT-  121
            +L+E+R  ++ P++M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E ++R + + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  ESEIVVGDLRVSIDDCTVYWQEEKMSPTKKEYEIIQALAKRKNHLVTRDQLMNTIWGYS-  180
              EI VG L +  +D TV  +   ++ T+KE+EI+  L + K + +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHVKNIRKKIPGIPLKTITGMGYQL  213
            E D+  ++ H+KN+R K+P   +KTI G+GY+L
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

105) BCE_4662 in NC_003909


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  146 bits (538),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 147/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVQKYLIKEGFQVTIASDGEEGVNTYLQGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V+ +L   G+QV   +DG+E+   + + +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTLDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LTL P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLD  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+L+
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

106) CLS_07200 in NC_021047


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 100/221 (46%), Positives = 152/221 (69%), Gaps = 4/221 (1%)

Query  1    MAKTILIIEDEIAIQNIVRAFLEDAGYTVYSAGDGLEGIETFRRCdpdlvlldlmlpKID  60
            M+  IL++ED+  I N VRAFL +AGY V +  DG E+   F     +LV+LD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFAVCEILRKESRTPIIMLTARDDDASQMKGFDVLADDYIIKPFSMPLVLRRIEAVLRRT  120
            G  +   +R  + TPI+M+TA  DD +Q+++FD  ADDY+ KPF M ++L+R+EA+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  EQGTEEEPSVIRYKEITLDAENYEVLVGTDEVSLTSREFEILKLLLENPGKVFSRESLLD  180
               + E    IR   +TL +E++ VL +  E++LT +EFEIL LL++N G+ +++E +L 
Sbjct  121  GALAKE----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  SVWGYEYYGDQKIVNTHIKNIRKKLGVDYIETIRGVGYKIE  221
             +WGY++ GD   V+THIKN+R KL  + I TIRGVGY++E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

107) BCAH187_A4663 in NC_011658


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 147/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVQKYLIKEGFQVTIASDGEEGVNTYLQGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V+ +L   G+QV   +DG+E+   + + +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

108) BCK_12555 in NC_018491


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 147/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVQKYLIKEGFQVTIASDGEEGVNTYLQGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V+ +L   G+QV   +DG+E+   + + +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLD  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+L+
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

109) BCG9842_B0590 in NC_011772


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 146/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLLKEGFQVTMASDGEAGVQTFFKSSFDLVILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+ +   F+ ++++LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGNPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

110) BCN_4438 in NC_016771


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 147/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVQKYLIKEGFQVTIASDGEEGVNTYLQGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V+ +L   G+QV   +DG+E+   + + +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

111) phoP in NC_009848


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (533),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/238 (41%), Positives = 153/238 (65%), Gaps = 19/238 (7%)

Query  1    MNKKILVVDDEESIVTLLSYNLERAGYDVVTARDGEEALEKAASEQPDLIVLDLMLPKMD  60
            M+ +IL+V+D++ I   +   L  AGY+V +  DG+EA  K   +  +L++LD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKQLRIQKMMFPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVGARVKAILRR  120
            G E+ +++R ++   PILM+TA  D+ +++ +++  ADDY+TKPF  + +  RV A+LRR
Sbjct  61   GHELLREFRAKNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  AQQSQPAPTQEEKEEIIADQIKIGELRILPEHYEVYFQEERLELTPKEFELLLYLAKHKG  180
            +               +A +I++G L +LPE++ V  +   L LT KEFE+LL L ++KG
Sbjct  120  S-------------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKG  166

Query  181  RVLTRDLLLSAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPTYIKTIRGLGYKLEEP  238
            R LT++++LS +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY+LEE+
Sbjct  167  RTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

112) BTG_26185 in NC_018500


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 146/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLLKEGFQVTMASDGEAGVQTFFKSSFDLVILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+ +   F+ ++++LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGNPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

113) BTF1_21230 in NC_018508


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 146/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLLKEGFQVTMASDGEAGVQTFFKSSFDLVILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+ +   F+ ++++LVILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGNPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

114) SIR_1093 in NC_022246


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 144/213 (68%), Gaps = 2/213 (0%)

Query  3    KILVVEDDTTINQVICEFLKENHYEVTAVFDGAEALRIFEEKSFDLIVLDVMLPSMSGLD  62
            +IL+VEDD  I + +  FL E  Y+V A  DG EA   F E++++L++LD+MLP+M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQVPVMMLTALDDEYTQLVSFNHLISDYVTKPFSPLILMKRIENIFRSTVT-  121
            +L+E+R  ++ P++M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E ++R + + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  ESEIIVGDLRVSVDDCTVYWQEEKMSPTKKEYEIIQALAKRKNHLVTRDQLMNTIWGYS-  180
              EI VG L +  +D TV  +   ++ T+KE+EI+  L + K + +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHVKNIRKKIPGIPLKTITGMGYQL  213
            E D+  ++ H+KN+R K+P   +KTI G+GY+L
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

115) SII_1115 in NC_022237


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 144/213 (68%), Gaps = 2/213 (0%)

Query  3    KILVVEDDTTINQVICEFLKENHYEVTAVFDGAEALRIFEEKSFDLIVLDVMLPSMSGLD  62
            +IL+VEDD  I + +  FL E  Y+V A  DG EA   F E++++L++LD+MLP+M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQVPVMMLTALDDEYTQLVSFNHLISDYVTKPFSPLILMKRIENIFRSTVT-  121
            +L+E+R  ++ P++M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E ++R + + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  ESEIIVGDLRVSVDDCTVYWQEEKMSPTKKEYEIIQALAKRKNHLVTRDQLMNTIWGYS-  180
              EI VG L +  +D TV  +   ++ T+KE+EI+  L + K + +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHVKNIRKKIPGIPLKTITGMGYQL  213
            E D+  ++ H+KN+R K+P   +KTI G+GY+L
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

116) SCIM_0547 in NC_018073


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 144/213 (68%), Gaps = 2/213 (0%)

Query  3    KILVVEDDTTINQVICEFLKENHYEVTAVFDGAEALRIFEEKSFDLIVLDVMLPSMSGLD  62
            +IL+VEDD  I + +  FL E  Y+V A  DG EA   F E++++L++LD+MLP+M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQVPVMMLTALDDEYTQLVSFNHLISDYVTKPFSPLILMKRIENIFRSTVT-  121
            +L+E+R  ++ P++M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E ++R + + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  ESEIIVGDLRVSVDDCTVYWQEEKMSPTKKEYEIIQALAKRKNHLVTRDQLMNTIWGYS-  180
              EI VG L +  +D TV  +   ++ T+KE+EI+  L + K + +T++ +++ IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHVKNIRKKIPGIPLKTITGMGYQL  213
            E D+  ++ H+KN+R K+P   +KTI G+GY+L
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

117) Dtox_2915 in NC_013216


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  145 bits (532),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 90/217 (42%), Positives = 147/217 (68%), Gaps = 3/217 (1%)

Query  6    KILIADDEPRMLKLVSDFLKKDGHSVFVADNGRQALDIFNEQQLDLVILDVMMPEYDGWA  65
            +IL+ +D+ ++ + V  FL   G  V    +G +A   F E+  +LVILD+M+P  +G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  66   VCREIRKTSHVPIIMLTARAEESDELFGFELGADEYVTKPFSPKILVARVQALLRRIAEH  125
            + RE+R  ++ PI+M+TA +++ +++ +F+  AD+YVTKPF  +IL+ RV+ALLRR +  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  126  KNQMISIEGLEIDESGRCVTVDGVPLDLSMKEFELLNYLVNNQGRALNRDQILNAVWDYN  185
             ++ I +  L +   +  V  DG  L L+ KEFE+L  LV+N+GR+L ++ IL+ +W+Y+
Sbjct  124  AKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  186  YFGDARTVDTHIKNLRHKLGAKGLFIKTIRGLGYKFE  222
            + GD+ TV+THIKNLR KL  +  +IKTIRG+GY++E
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

118) BCB4264_A4647 in NC_011725


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 146/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETIEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   ++ K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

119) HD73_4832 in NC_020238


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 146/228 (65%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETIEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   ++ K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

120) phoP in NC_017568


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 153/231 (67%), Gaps = 14/231 (6%)

Query  1    MAQRVLVVDDEQSIVTLLKYNLEQSGYVVEVAQDGEEALQKEKETKPDLIVLDVMLPKKD  60
            M+ R+L+V+D++ I   ++  L ++GY V+   DG+EA  K  E   +L++LD+MLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKTIRSDKNQVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R+ KN+ PILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  SSLVDHVRKEEEDEDIVIGSIRIRPDFFEVYRNDELLELTPKEFELLLYLVERQGRVITR  180
            S+ +          +I +G + + P+ F V  ++  L LT KEFE+LL LV+ +GR +T+
Sbjct  120  SGALAK--------EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTH  171

Query  181  EHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPQFIKTVRGLGYKLE  231
            E +L+ +W Y+F GD+  V+ HI +LR KL EN     +IKT+RG+GY+LE
Sbjct  172  EIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

121) SPSINT_1451 in NC_014925


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (531),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 153/231 (67%), Gaps = 14/231 (6%)

Query  1    MAQRVLVVDDEQSIVTLLKYNLEQSGYVVEVAQDGEEALQKEKETKPDLIVLDVMLPKKD  60
            M+ R+L+V+D++ I   ++  L ++GY V+   DG+EA  K  E   +L++LD+MLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKTIRSDKNQVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R+ KN+ PILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  SSLVDHVRKEEEDEDIVIGSIRIRPDFFEVYRNDELLELTPKEFELLLYLVERQGRVITR  180
            S+ +          +I +G + + P+ F V  ++  L LT KEFE+LL LV+ +GR +T+
Sbjct  120  SGALAK--------EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTH  171

Query  181  EHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPQFIKTVRGLGYKLE  231
            E +L+ +W Y+F GD+  V+ HI +LR KL EN     +IKT+RG+GY+LE
Sbjct  172  EIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

122) Eab7_0619 in NC_018665


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (530),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 155/226 (69%), Gaps = 12/226 (5%)

Query  5    SFKILVVDDEAQMRDLLVSNLQKENYQTTTATNGQEALDQMQRDTFHLVLLDVMMPEMDG  64
            S++IL+V+D+ ++ + + + L    YQ  + T+G+EA  +   +T++LV+LD+M+P M+G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  65   LTACMRIREF---SNVPIIMLTARSDELDRIHGLKIGADDYITKPFSPRELLARIEATLR  121
                  +REF   ++ PI+M+TA SD+ ++I+++   ADDY+TKPF  + LL R+EA LR
Sbjct  62   HEL---LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLR  118

Query  122  RSHRFTVDQSATLTIGKLELDTESRSVHVSGKPISLTRKEFDLLHLFVQNNDKVFSREQL  181
            RS  ++ +    + +G+L L  E  +V   G  ++LTRKEF++L L+VQN+++ +++E +
Sbjct  119  RSGALAKE----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  182  LDQIWGADYIGNLRTVDTHIKTLRLKLGEAGGSIQTVWGIGYKFEE  227
            L +IWG D+ G+  TV+THIK LR KL E    I+T++G+GY++EE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

123) BCAH820_4650 in NC_011773


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (528),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKTIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

124) BACI_c45280 in NC_014335


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (528),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKTIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

125) Theos_0095 in NC_019386


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  144 bits (528),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 148/223 (67%), Gaps = 9/223 (4%)

Query  1    MKVLLVDDDPAILEVLEGYLKGAGFQVLKAEDGAEALALFPQA--DLVVLDLMLPKVDGF  58
            +++LLV+DD  I + + ++L  AG+QV    DG EA + F +   +LV+LD+MLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  59   QVAQAIRQARPELPLLLLTARGEEEDRVRGLELGADDYVVKPFSPREVVARVKALLRRAG  118
            ++ + +R A+ + P+L++TA +++E+++R+++  ADDYV KPF  + ++ RV ALLRR+G
Sbjct  63   ELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  119  -LKEELRYGPLRLLPKKREAYLGEEPLPLSRLEFDLLLTLAQHPGVVFSRERLLEKVWGP  177
             L  E+R G L LLP       +   LPL+R EF++LL L Q+ G  +++E +L ++WG 
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  178  DFPGVDRVVDVHIAALRRKLGDDAENPRFIETVRGVGYRFREG  220
            DF G +  V+ HI  LR KL ++     +I T+RGVGYR+ E+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

126) Calhy_2332 in NC_014652


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (525),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/217 (42%), Positives = 149/217 (69%), Gaps = 5/217 (2%)

Query  1    MKILLVEDEEKLRKVIKLYLEKEGFEVEEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILLVED++ + + ++ +L   G++V+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRT--  118
             +LRE+R K+DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  119  -KKPSSNDILFIDKAAREVYVKGQKINLTQKeyelllylyeRQNIALSRELILNSVWGYE  177
              K    + L +      V   G  + LT+KE+E+LL L + +  +L++E+IL+ +WGY+
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  178  YYGDLRTVDTHIKNLREKLGDLRDYIKTVRGYGYKFE  214
            + GD  TV+THIKNLR KL +  + IKT+RG GY++E
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

127) BT9727_4272 in NC_005957


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (525),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

128) STH3290 in NC_006177


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (525),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 144/219 (66%), Gaps = 6/219 (2%)

Query  9    VLVVDDEPRMRELIRLYLA-AECTVLEAGDGLTALRAVRDAGPDLVLLDVMMPRLDGWQT  67
            +L+V+D+ ++ + +R +LA A   V    DG  A     +   +LV+LD+M+P ++G + 
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  68   LQRIREESAVPVIMLTARGGVADRVQGLRMGADDYIAKPFDGRELAARVQAVLRRSAGQV  127
            L+ +R  +  P++M+TA ++  ++++++   ADDY++KPF  + L  RV+A+LRRS++  
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  128  EANVPIRRGSLTIRPAERTALYAGRPLPLTPKEFDLLALLAAHPGQVFSREKLLDRIWGP  187
                 IR G LT+ P + T L  G  LPLT KEF++L LL  + G+ +++E +L RIWG 
Sbjct  125  KE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  188  DFQGDARTVDAHIKNLRDKLGEGAGLILTVWGVGYRFAE  226
            DF+GD+ TV++HIKNLR KL E   +I T++GVGYR+ E
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

129) BC4539 in NC_004722


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (527),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKSLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

130) BMB171_C4183 in NC_014171


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (527),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKSLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

131) YBT020_22300 in NC_017200


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (525),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 144/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDISIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATEETEKMIQIGDLTIDPINFTVEKNGKSLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                      K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLVWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + +W  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

132) Geoth_0905 in NC_015660


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (526),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 149/231 (65%), Gaps = 12/231 (5%)

Query  1    MSKKVLVVDDEQSIVTLLTYNLERAGFTVVTANDGEEAIEKVAAERPEFIILDLMLPKLD  60
            MS ++L+V+D++ I   +   L  AG+ V +  DG+EA  K   +  +++ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GVEVCKQLRQQKVMTPILMLTAKDDEFDKILGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +++R  K  TPILM+TA  D+ ++I +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TQFSNGETEAIDKIVIGDLKIFPDQYEAYFGGERLELTPKEFELLLYLAKHKGRVLTRDQ  180
            +            I +G L ++P+++    +G  L LT KEFE+LL L ++KGR LT++ 
Sbjct  120  S------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LLSAVWNYDFAGDTRIVDVHISHLREKIEQDTKKPLYIKTIRGLGYKLEEP  231
            +LS +W YDF GD   V+ HI +LR K+ ++      IKTIRG+GY+LEE+
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

133) GY4MC1_0836 in NC_014650


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  143 bits (526),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 149/231 (65%), Gaps = 12/231 (5%)

Query  1    MSKKVLVVDDEQSIVTLLTYNLERAGFTVVTANDGEEAIEKVAAERPEFIILDLMLPKLD  60
            MS ++L+V+D++ I   +   L  AG+ V +  DG+EA  K   +  +++ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GVEVCKQLRQQKVMTPILMLTAKDDEFDKILGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +++R  K  TPILM+TA  D+ ++I +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TQFSNGETEAIDKIVIGDLKIFPDQYEAYFGGERLELTPKEFELLLYLAKHKGRVLTRDQ  180
            +            I +G L ++P+++    +G  L LT KEFE+LL L ++KGR LT++ 
Sbjct  120  S------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LLSAVWNYDFAGDTRIVDVHISHLREKIEQDTKKPLYIKTIRGLGYKLEEP  231
            +LS +W YDF GD   V+ HI +LR K+ ++      IKTIRG+GY+LEE+
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

134) BCE_2041 in NC_003909


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 142/219 (65%), Gaps = 5/219 (2%)

Query  4    KILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKINEVKVDMVILDIMMPNMDGFD  63
            +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  64   VCFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  123
            +  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  124  VSQSIQVGNVLLNRKTFEVITGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYD  183
            +++ I+VG + L    F V+ +   + L  KEFE+L+ L  + GRT ++E ++  +WGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  184  FEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  222
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

135) BCK_24760 in NC_018491


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 142/219 (65%), Gaps = 5/219 (2%)

Query  4    KILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKINEVKVDMVILDIMMPNMDGFD  63
            +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  64   VCFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  123
            +  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  124  VSQSIQVGNVLLNRKTFEVITGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYD  183
            +++ I+VG + L    F V+ +   + L  KEFE+L+ L  + GRT ++E ++  +WGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  184  FEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  222
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

136) Desdi_1113 in NC_019903


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 145/223 (66%), Gaps = 10/223 (4%)

Query  5    QLLIVDDEEHICNLVSLYLSDE-FHITKVYDGHTALSVFVEKKFDLIVLDIMLPGLNGWE  63
            ++L+V+D++HICN V  +L++  +++    DG+ A + F E+ ++L++LDIMLPG+NG E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  64   LCRKIRMLSDTPVIMLTAKDDPHDKILGFDLGADDYVTKPFNPGELLARAKAVLRRFNSA  123
            L R +R  +DTP++M+TA  D +++I +FD  ADDYVTKPF+   LL R  A+LRR  + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  124  SSEELQIIKYPGFILNKESFKVEILGQLLELTAKEFSLLWFFASNPGIVLQRENIMLKVW  183
            + E    I+   + L  E F V   G  L LT KEF +L ++  N G  L +E I+ ++W
Sbjct  124  AKE----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  184  GFDYLGDTRTIDNTIKRLRRKLESVPEAPVYIQTVWGLGYKFE  226
            G+D+ GD  T++  IK LR KL   PE    I+T++G+GY++E
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKL---PEN--IIKTIRGVGYRLE  217

137) Aaci_0044 in NC_013205


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 143/222 (65%), Gaps = 13/222 (5%)

Query  4    ILVADDEPHIRELVRSTLEREGHrvveaadgreaadavarePVQLAVIDVMMPEVDGFEL  63
            IL+ +D+ HI + VR+ L   G +V   +DG EA      +  QL ++D+M+P ++G EL
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   TRWLREERDVPILLLTALGETSHKVRGLRLGADDYLVKPFAPEELVARVEALLRRYRIRA  123
             R +R   D PIL++TAL++  +++R++   ADDY+ KPF  + L+ RVEALLRR     
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-----  119

Query  124  DGALDLAV----LRLLSDTYEVEANGERMALPPKEFQLLFTLAASAGRTLSRDKLIEEVW  179
             GAL   +    L LL++ + V  +G  ++L  KEF++L+ L  + GRTL+++ ++  +W
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  180  GYDYAGDERTVDVHIKRLRVKFPEDVYPFRIRTVRGLGYRLE  221
            GYD+ GD  TV+ HIK LR K+PE++    I+T+RG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

138) BAA_4790 in NC_012659


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVDTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

139) GBAA_4777 in NC_007530


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVDTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

140) BA_4777 in NC_003997


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVDTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

141) BAMEG_4809 in NC_012581


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVDTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

142) H9401_4559 in NC_017729


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVDTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

143) BAS4433 in NC_005945


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVDTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

144) BCA_4643 in NC_012472


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVGKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

145) BC1956 in NC_004722


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALQKMDDVKVDMVILDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVTSGEQTVTLPLKEFELLFTLGAKSGRTCSREQLIEEIW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IW
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

146) BCB4264_A1962 in NC_011725


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALQKMDDVKVDMVILDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVTSGEQTVTLPLKEFELLFTLGAKSGRTCSREQLIEEIW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IW
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

147) bcf_22710 in NC_016779


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVGKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

148) BCQ_4343 in NC_011969


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

149) BALH_4122 in NC_008600


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKMIQIGDLTIDPINFTVGKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

150) BTG_10155 in NC_018500


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALQKMDDVKVDMVILDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVTSGEQTVTLPLKEFELLFTLGSKSGRTCSREQLIEEIW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IW
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

151) HD73_2121 in NC_020238


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALQKMDDVKVDMVILDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVTSGEQTVTLPLKEFELLFTLGSKSGRTCSREQLIEEIW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IW
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

152) GWCH70_2675 in NC_012793


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 152/232 (66%), Gaps = 15/232 (6%)

Query  1    MCKKVLVVDDEQSIVTLLTYNLEQAGFTVLTANDGEEAIEKVAFEQPAF--IILDLMLPK  58
            M  ++L+V+D++ I   +   L +AG+ V +  DG+EA  K  F + ++  +ILD+MLP 
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTK--FYENTYQLVILDIMLPG  58

Query  59   LDGVEVCKQLRQQKVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAIL  118
            ++G E+ +++R  K  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+L
Sbjct  59   MNGHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL  117

Query  119  RRTQLSNGEMETKEIVIGDLKILPDSYEAYFRGERLELTPKEFELLVYLAKHKGRVLTRD  178
            RR+    G + +KEI +G L +LP+ +     G  L LT KEFE+L+ L ++KGR LT++
Sbjct  118  RRS----GAL-AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  179  QLLSSVWNYDFAGDTRIVDVHISHLREKIEQDTKKPIYIKTIRGLGYKLEGP  230
             +LS +W YDF GD   V+ HI +LR K+ ++      IKTIRG+GY+LE +
Sbjct  173  IILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

153) Gura_1986 in NC_009483


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 143/222 (65%), Gaps = 6/222 (2%)

Query  1    MRILVVEDEIKTSAFLRKGLRESGFTVDVANDGEEGLDLALSREYDLIILDVMLPGVDGW  60
            +RIL+VED+      +R  L E+G+ VD   DG+E+        Y+L+ILD+MLPG++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   QIIKRIRGTKRDTPVLFLTARDAVQDRIKGLELGADDYLVKPFAFSELLARIRTILRRGP  120
            ++++ +R+ K DTP+L +TA    +++I++++  ADDY+ KPF    LL R+ ++LRR+ 
Sbjct  63   ELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  VRTLELIRIADLEIDLMGHRVMRGGKRLDLTPKEFALLSLLARRTGEVLTRTRIAERIWD  180
              + E IR++ L +   +  V+ +G  L LT KEF +L LL +  G  LT+  I  RIW+
Sbjct  122  ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  IDFESDTNVVDVHMRRLRAKVDDPFEHKLIHTVRGVGYVLEE  222
             DFE+D + V+ H++ LRAK+ +    ++I T+RGVGY LEE
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGYRLEE  218

154) Amet_3209 in NC_009633


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 92/221 (42%), Positives = 153/221 (70%), Gaps = 4/221 (1%)

Query  2    VGSRILLVEDEKNLRKLVATYLKKEMVSVIEAADGKEALVLWEEEQYDLIIVDIMLPEYD  61
            ++ RILLVED+ ++ + V ++L      V   +DG+EA     E+ Y+L+I+DIMLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  62   GWTICKRIREKSNVPILILTARSEEHDKLFGFDLGVDDYMTKPFSVKELVARVKALLKRS  121
            G  + + +R K++ PIL++TA S++++++ +FD   DDY+TKPF ++ L+ RV ALL+RS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  122  NRQLSTETLIVQGLKVDKKGHQVFLQGERLMLTPKEYDLLLIFLHNQNQALSREVILDGV  181
               L+ E + V  L +   +  V+ +G  L LT KE+++LL++++N+ ++L++E+IL  +
Sbjct  121  G-ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  182  WGYDYYGDLRTVDTHVKRLRHKLKEMGEQIKTVRGLGYRFE  222
            WGYD+ GD  TV+TH+K LR KL E  + IKT+RG+GYR+E
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

155) BMB171_C1742 in NC_014171


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (521),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 90/219 (42%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  7    KILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALQKMDDVKVDMVILDIMMPNMDGFD  66
            +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  67   VCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  126
            +  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  127  VSQSIQVGNVLLNRKTFEVTSGEQTVTLPLKEFELLFTLGAKSGRTCSREQLIEEIWGYD  186
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  187  FEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  225
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

156) BCG9842_B3366 in NC_011772


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALRKMDDVKVDMVILDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVTSGEQTVTLPLKEFELLFTLGSKSGRTCSREQLIEEIW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IW
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

157) BTF1_07175 in NC_018508


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALRKMDDVKVDMVILDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVTSGEQTVTLPLKEFELLFTLGSKSGRTCSREQLIEEIW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IW
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

158) Calow_0190 in NC_014657


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 92/217 (43%), Positives = 147/217 (68%), Gaps = 5/217 (2%)

Query  1    MKILLIEDEEKLRKIIKLYLEKEGFEVKEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L   G++V   +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRSKK  120
             +LRE+R K+DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+RS  
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  121  SSSD---EILFIDKAAREVYVKGQKLNLTQKeyelllylyeRQNIALSREQILNSVWGYE  177
             + +     L +      V   G  L LT+KE+E+LL L + +  +L++E IL+ +WGY+
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  178  YYGDLRTVDTHIKNLREKLGELRDYIKTVRGYGYKFE  214
            + GD  TV+THIKNLR KL E  + IKT+RG GY++E
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

159) SSU05_1661 in NC_009442


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 130/193 (68%), Gaps = 2/193 (1%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRDNLMMGIWGYT-  180
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ ++++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDSRVLDNHIKN  193
            E D+  ++ HIKN
Sbjct  184  EGDGSTVHTHIKN  196

160) BCZK4283 in NC_006274


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 11/228 (4%)

Query  1    MSHHILLVEDDFSIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLD  60
            MS +ILLVEDD  I + V  +L   G+QV   +DG+E+   +   +++L+ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRS  120
            G E++R +R K+  PILMM+A   D ++  +++  ADDY+ KPF M  L  RV A +RRS
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  TKYSATETTEKTIQIGDLTIDPINFTVEKNGKLLKLTLKEFEILKLFVKNQNRVFTKAQI  180
                   +  K I++G LT+ P +FTV  +G  L LT KEFEIL L+V+N+ R +T   I
Sbjct  121  G------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEII  174

Query  181  YTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLE  228
             + IW  ++ GD++ ++ H++ LR K+  +      IKT++G+GY+LE
Sbjct  175  LSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

161) Lacal_1289 in NC_015638


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 149/223 (67%), Gaps = 6/223 (2%)

Query  5    DIKILLVDDEPDILEIVGYNLSKEGYQVSTASNgvegvkkakkekPHLIILDVMMPEMDG  64
             I+ILLV+D+ +I + V   L+  GYQV + ++G E+  K   +  +L+ILD+M+P M+G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  65   IEACEQIRKVPELKNTIITFLTARGEDYSQVAGFDAGADDYITKPIKPKLLLSKVKALLR  124
             E    +R     ++T I  +TA ++D +Q+ +FDA ADDY+TKP+K ++LL +V ALLR
Sbjct  62   HEL---LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLR  118

Query  125  RLKAEEGNATIVKVGNLTINKEEYKIILDGKEILLPKKEFELLSLLASKPGKVFKRENIL  184
            R     + A  ++VG LT+  E++ ++ DG E+ L +KEFE+L LL  + G+ + +E IL
Sbjct  119  R---SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  185  ERIWGNEVVVGGRTIDVHIRKIRDKIGDKSIKTIKGVGYKFIE  227
             RIWG +   +G T++ HI+++R K+ ++ IKTI+GVGY++ E
Sbjct  176  SRIWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

162) pcoR in NC_020504


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 89/219 (41%), Positives = 139/219 (64%), Gaps = 2/219 (0%)

Query  1    MRLLIVEDEKRLALSLAKGLTAEGYAVDVVHDGREGLHRASESPYDLVILDIMLPGMNGY  60
            +R+L+VED+ ++  ++   L+  GY VD   DG E+  +  E+ Y+LVILDIMLPGMNG 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   RVCGALRAAGHDVPILMLTAKDGEYDEAEGLDTGADDYLTKPFSYVVLVARIKALLRRRG  120
             +   +RA  +D PILM+TA  ++ ++  ++D+ ADDY+TKPF   +L+ R+ ALLRR G
Sbjct  63   ELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  PGASPVLVHGDLKVDTAARRVHLGESEVALTAKEFAVLEQLVTRAGEVVSKASILEHVWD  180
            + A  + V G L +      V  + +E++LT KEF +L  LV   G  ++   IL ++W+
Sbjct  122  ALAKEIRV-GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  FAYDGDPNIVEVYISTLRRKLRPGLIRTVRGAGYRLESG  219
            + ++GD + V+  I  LR KL   +I+T+RG GYRLE +
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES  219

163) Ththe16_1739 in NC_017272


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 147/223 (66%), Gaps = 9/223 (4%)

Query  1    MRVLLVDDDPALLEVLGAYLRGAGFEVLQAEDGERALE-LYPRA-DLIILDLMLPKLDGF  58
            +R+LLV+DD  + + + A+L  AG++V    DG+ A   +Y  + +L+ILD+MLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  59   RVLAEVRRERPELPILMLTARGEEEERVKGLELGADDYVVKPFSPKEVVARVKALLRRAG  118
             +L E R  + + PILM+TA +++E+++++++  ADDYV KPF  + ++ RV ALLRR+G
Sbjct  63   ELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  119  -LKEELNYGPLRLLPKERQAYLEGKPLPLSQLEFDLLLTLAQHPGMVFTRERLLEKVWGP  177
             L  E+  G L LLP +     +G  LPL++ EF++LL L Q+ G  +T+E +L ++WG 
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  178  DFPGIDRVVDVHIAALRKKLMDDPENPRFIETVRGVGYRFREG  220
            DF G +  V+ HI  LR KL ++     +I T+RGVGYR+ E+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

164) Bcer98_3274 in NC_009674


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 97/234 (42%), Positives = 150/234 (65%), Gaps = 15/234 (6%)

Query  1    MSNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEVAFQKATTERPDLIILDLMLPKMD  60
            MS RIL+V+D++ I   +   L +AG++V +  DG+ A+ K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQEEQIPEVPDENSIMISELKILPEFYEAYFRGEKLELTPKEFELLVYLARNKGRVLT  180
            +     +I          ++ L +LPE +     G  L LT KEFE+L+ L +NKGR LT
Sbjct  120  SGALAKEIR---------VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEHNTKKPAYIKTIRGLGYKLEEP  234
            ++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

165) Calkr_0246 in NC_014721


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 90/217 (42%), Positives = 148/217 (69%), Gaps = 5/217 (2%)

Query  1    MKILLIEDEEKLRKIIKLYLEKEGFEVEEVSDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L   G++V+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRT--  118
             +LRE+R K+DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  119  -KKPNSNDILFIDKAAREVYVKGQKINLTQKeyelllylyeRQNIALSREQILNSVWGYE  177
              K    + L +      V   G  + LT+KE+E+LL L + +  +L++E IL+ +WGY+
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  178  YYGDLRTVDTHIKNLREKLGDLRDYIKTVRGYGYKFE  214
            + GD  TV+THIKNLR KL +  + IKT+RG GY++E
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

166) Calla_2103 in NC_015949


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 90/217 (42%), Positives = 148/217 (69%), Gaps = 5/217 (2%)

Query  1    MKILLIEDEEKLRKIIKLYLEKEGFEVEEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L   G++V+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRT--  118
             +LRE+R K+DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  119  -KKPNSNDILFIDKAAREVYVKGQKINLTQKeyelllylyeRQNIALSREQILNSVWGYE  177
              K    + L +      V   G  + LT+KE+E+LL L + +  +L++E IL+ +WGY+
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  178  YYGDLRTVDTHIKNLREKLGDLRDYIKTVRGYGYKFE  214
            + GD  TV+THIKNLR KL +  + IKT+RG GY++E
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

167) hssR1 in NC_018877


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (518),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALRKMDDVKVDMVILDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVTSGEQTVMLPLKEFELLFTLGSKSGRTCSREQLIEEIW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IW
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

168) czcR2 in NC_009659


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 144/222 (65%), Gaps = 5/222 (2%)

Query  1    MKILLVEDEVKSGEYLRKGLREAGFVVDWARDGAEGLQLALQESYELVILDVMLPLLDGW  60
            ++ILLVED+    + +R  L EAG+ VD   DG E+     +++Y+LVILD+MLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   QLLRELRKVRDTPVLFLTARDEVEDRVKGLELGADDYLVKPFSFMELIARVRTLLRRGPV  120
            +LLRE+R   DTP+L +TA  + E+++++++  ADDY+ KPF    L+ RV +LLRR+  
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  121  RESSLIEIADMQIDVMKRRVTRNGERLDLTAKEFSLLHLLAQRRGEVLSRSLIASQVWDM  180
                 I ++ + +      V  +G  L LT KEF +L LL Q +G  L++ +I S++W+ 
Sbjct  123  LAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  181  NFDSDTNVVDVAIRRLRAKLDDPHPRKLIQTVRGIGYVLEEG  222
            +F++D + V+  I+ LRAKL    P ++I+T+RG+GY LEE+
Sbjct  182  DFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEES  219

169) CT43_CH1910 in NC_017208


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (516),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 90/219 (42%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  13   KILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALRKMDDVKVDMVILDIMMPNMDGFD  72
            +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  73   VCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  132
            +  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  133  VSQSIQVGNVLLNRKTFEVTSGEQTVMLPLKEFELLFTLGSKSGRTCSREQLIEEIWGYD  192
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  193  FEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  231
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

170) BCAH187_A2062 in NC_011658


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 141/219 (65%), Gaps = 5/219 (2%)

Query  4    KILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKIDEVKVDMVILDIMMPNMDGFD  63
            +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  64   VCFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  123
            +  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  124  VSQSIQVGNVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKTGRTCSREQLIEDVWGYD  183
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  184  FEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  222
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

171) BCN_1873 in NC_016771


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 141/219 (65%), Gaps = 5/219 (2%)

Query  4    KILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKIDEVKVDMVILDIMMPNMDGFD  63
            +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  64   VCFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  123
            +  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  124  VSQSIQVGNVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKTGRTCSREQLIEDVWGYD  183
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  184  FEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  222
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

172) H175_ch1937 in NC_020376


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 90/219 (42%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  7    KILIVDDDPHIRELVSVFLEREGFQTYEAIDGVDALRKMDDVKVDMVILDIMMPNMDGFD  66
            +IL+V+DD HI + V  FL   G+Q     DG +A  K  +   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  67   VCFELRKYYDIPVLMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  126
            +  E+R   D P+LM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  127  VSQSIQVGNVLLNRKTFEVTSGEQTVMLPLKEFELLFTLGSKSGRTCSREQLIEEIWGYD  186
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  IWGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  187  FEGNERTLDVHINRLREKFQEEQSKFSIKTIRGLGYRLE  225
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

173) Clocl_1711 in NC_016627


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 145/218 (67%), Gaps = 7/218 (3%)

Query  5    VEDDRSIRELIIYALKSNGYEAVGFDKAEPFYKELENKLPDLVLLDIMLPGEDGIEILKK  64
            VEDD  I + +   L   GY+  +   ++  Y  + ++  +LV+LDIMLPG +G E+L+ 
Sbjct  8    VEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLRE  67

Query  65   LKASPKLRNIPVIMLTAKSAEYDKVLGLDSGADDYITKPFGIMEFLSRVKAVLRRSGNVS  124
            ++A     + P++M+TA S + +++ ++D+ ADDY+TKPF +  +L RV A+LRRSG ++
Sbjct  68   FRAKN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  125  NPSEISVGRITMYIDKHVVIADGKEVALTFKEFELLKYLMENAGIVLTRDKLLEEVWGYE  184
            +  EI VGR+T+  +   V+ DG E++LT KEFE+L  L++N G  LT++ +L  +WGY+
Sbjct  125  K--EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  YEGETRTLDVHIRTLRQKLGEAGAVIETVRGVGYKIGG  222
            +EG+  T++ HI+ LR KL E   +I T+RGVGY++  
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

174) GTNG_2656 in NC_009328


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 152/232 (66%), Gaps = 14/232 (6%)

Query  1    MGKKILVVDDEQPIVTLLSYNLEKAGFQVVAAYDGEEALEKVAFEQP-ALIILDLMLPKL  59
            M+ +IL+V+D++ I   +   L  AG+QV A  DG+EA  K  +E+   L+ILD+MLP +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKF-YENTYQLVILDIMLPGM  59

Query  60   DGVEVCKRLRQQQIMTPILMLTARDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILR  119
            +G E+ + +R ++  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LR
Sbjct  60   NGHELLREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLR  118

Query  120  RTDLAQPAAEPSERLVIGDLEIFPERYEAAVGDKPLELTPKEFELLLHLARHKGRVLTRD  179
            R+      +  +  + +G L ++PE +    ++  L LT KEFE+LL L ++KGR LT++
Sbjct  119  RS------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  180  QLLSAVWNYDFAGDTRIVDVHISHLREKIEEDTKKPVYIKTVRGLGYKLEEP  231
             +LS +W YDF GD   V+ HI +LR K+ E+      IKT+RG+GY+LEE+
Sbjct  173  IILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

175) yclJ in NC_010382


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 87/217 (41%), Positives = 144/217 (67%), Gaps = 6/217 (2%)

Query  1    MVDDDAHIRELVRVFLQNEGLEVIEATDGVDALSKLASEKVDMVIMDIMMPNMDGWALCE  60
            +V+DD HI + VR FL + G +V   TDG +A +K+  +  ++VI+DIM+P M+G  L  
Sbjct  7    LVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLR  66

Query  61   EIRSYHTDLPILMLTAKGETAQKVKGFHLGTDDYLVKPFEPAELIVRVKSILKRYRIALS  120
            E+R+   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ++L+R   AL+
Sbjct  67   EFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGALA  124

Query  121  QVVEVGNVKLNRHTHEVDLNGEIIVLRLKEFELLFTLASYVGKTFSREQLIEEIWGYDYE  180
            + + VG + L  +   V  +G  + L  KEFE+L+ L    G+T+++E ++  IWGYD+E
Sbjct  125  KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFE  184

Query  181  GDERTIDVHIKRIRERFPQEISGFVIRTLRGLGYRLE  217
            GD  T++ HIK +R ++P++I    I+T+RG+GYRLE
Sbjct  185  GDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

176) COB47_0246 in NC_014392


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (514),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 92/217 (43%), Positives = 148/217 (69%), Gaps = 5/217 (2%)

Query  1    MKILLIEDEEKLRKIMKLYLEKEGFEVEEASDGNEAIEKFQPSMYSVVILDVMLPQKDGW  60
            ++ILL+ED++ + + ++ +L   G++V+  +DGNEA  KF  + Y +VILD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   SVLREIRKKDDTPVIMLTARGEDDDKIFGFELGADDYVVKPVSPKEIVARVKAILKRT--  118
             +LRE+R K+DTP++M+TA ++D+++I +F+  ADDYV KP   + ++ RV A+L+R+  
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  119  -KKPSSNDILFIDKAAREVYVKGQKLNLTQKeyelllylyeRQNIALSREQILNSVWGYE  177
              K    + L +      V   G  L LT+KE+E+LL L + +  +L++E IL+ +WGY+
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  178  YYGDLRTVDTHIKNLREKLGELRDCIKTVRGYGYKFE  214
            + GD  TV+THIKNLR KL E  + IKT+RG GY++E
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

177) BCQ_1947 in NC_011969


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (514),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 141/219 (65%), Gaps = 5/219 (2%)

Query  13   KILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKIDEVKVDMVILDIMMPNMDGFD  72
            +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  73   VCFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  132
            +  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  133  VSQSIQVGNVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKTGRTCSREQLIEDVWGYD  192
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  193  FEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  231
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

178) Cthe_1600 in NC_009012


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (514),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 89/218 (41%), Positives = 145/218 (67%), Gaps = 7/218 (3%)

Query  5    VEDDRSIRELIIYALKSNGYEAVGFDKAEPFYKELENKLPDLVLLDIMLPGEDGIEILKK  64
            VEDD  I + +   L   GY+  +   ++  Y  + ++  +LV+LDIMLPG +G E+L+ 
Sbjct  8    VEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLRE  67

Query  65   LKASPKLRNIPVIMLTAKSAEYDKVLGLDSGADDYITKPFGIMEFLSRVKAVLRRSGNVS  124
            ++A     + P++M+TA S + +++ ++D+ ADDY+TKPF +  +L RV A+LRRSG ++
Sbjct  68   FRAKN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  125  NSSEISVGQLTMYIDKHVVIADGKEVALTFKEFELLKYLMENAGIVLTRDKLLEEVWGYE  184
            +  EI VG+LT+  +   V+ DG E++LT KEFE+L  L++N G  LT++ +L  +WGY+
Sbjct  125  K--EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  YEGETRTLDVHIRTLRQKLGEAGAIIETVRGVGYKIGG  222
            +EG+  T++ HI+ LR KL E   II T+RGVGY++  
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

179) PM3016_1778 in NC_016935


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 147/221 (67%), Gaps = 6/221 (2%)

Query  2    ITILLVDDDNHIRELMKLSLREEGYRLIEAGDGQAALHCLEEVQVHLVVLDVMMPRMDGF  61
            I ILLV+DD+HI + ++  L E GY++    DG+ A   + E   +LV+LD+M+P M+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  62   ELCRQIRRKYNDLPVLMVTAKGETGDKVEGFQLGADDYLVKPFDPRELIMRVKSLLRRYK  121
            EL R++R K ND P+LM+TA ++  +++ +F+  ADDY+ KPF  + L+ RV +LLRR  
Sbjct  63   ELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  122  LAGSDRIQLGRVELDKKGYEVIRGQEHLTLPLKEFELLHMLASHPNQILTRNQLIEGIWG  181
              + + I++GR+ L   ++ V+ +  +L L  KEFE+L +L  +  + LT++ ++  IWG
Sbjct  122  ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  182  LDYEGDDRTVDVHIKRLRERFKGEEEGFVIKTIRGLGYKLE  222
             D+EGD+ TV+ HIK LR ++  +    +IKTIRG+GY+LE
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

180) B2K_09055 in NC_017672


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 147/221 (67%), Gaps = 6/221 (2%)

Query  2    ITILLVDDDNHIRELMKLSLREEGYRLIEAGDGQAALHCLEEVQVHLVVLDVMMPRMDGF  61
            I ILLV+DD+HI + ++  L E GY++    DG+ A   + E   +LV+LD+M+P M+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  62   ELCRQIRRKYNDLPVLMVTAKGETGDKVEGFQLGADDYLVKPFDPRELIMRVKSLLRRYK  121
            EL R++R K ND P+LM+TA ++  +++ +F+  ADDY+ KPF  + L+ RV +LLRR  
Sbjct  63   ELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  122  LAGSDRIQLGRVELDKKGYEVIRGQEHLTLPLKEFELLHMLASHPNQILTRNQLIEGIWG  181
              + + I++GR+ L   ++ V+ +  +L L  KEFE+L +L  +  + LT++ ++  IWG
Sbjct  122  ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  182  LDYEGDDRTVDVHIKRLRERFKGEEEGFVIKTIRGLGYKLE  222
             D+EGD+ TV+ HIK LR ++  +    +IKTIRG+GY+LE
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

181) KNP414_01465 in NC_015690


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (513),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 147/221 (67%), Gaps = 6/221 (2%)

Query  2    ITILLVDDDNHIRELMKLSLREEGYRLIEAGDGQAALHCLEEVQVHLVVLDVMMPRMDGF  61
            I ILLV+DD+HI + ++  L E GY++    DG+ A   + E   +LV+LD+M+P M+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  62   ELCRQIRRKYNDLPVLMVTAKGETGDKVEGFQLGADDYLVKPFDPRELIMRVKSLLRRYK  121
            EL R++R K ND P+LM+TA ++  +++ +F+  ADDY+ KPF  + L+ RV +LLRR  
Sbjct  63   ELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  122  LAGSDRIQLGRVELDKKGYEVIRGQEHLTLPLKEFELLHMLASHPNQILTRNQLIEGIWG  181
              + + I++GR+ L   ++ V+ +  +L L  KEFE+L +L  +  + LT++ ++  IWG
Sbjct  122  ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  182  LDYEGDDRTVDVHIKRLRERFKGEEEGFVIKTIRGLGYKLE  222
             D+EGD+ TV+ HIK LR ++  +    +IKTIRG+GY+LE
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

182) YBT020_10175 in NC_017200


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (513),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 141/219 (65%), Gaps = 5/219 (2%)

Query  4    KILIVDDDPHIRELVSIFLEREGFQTYEAIDGLDALQKIDEVKVDMVILDIMMPNMDGFD  63
            +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  64   VCFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  123
            +  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  124  VSQSIQVGNVLLNRKTFEVTTGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYD  183
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  184  FEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  222
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

183) BT9727_1790 in NC_005957


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  140 bits (513),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 91/220 (42%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLEREGFQIYEAIDGLDALQKMNEVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q+    DG +A  K  E   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYEIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   + PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

184) Cyan7425_2927 in NC_011884


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 97/226 (43%), Positives = 145/226 (65%), Gaps = 11/226 (4%)

Query  1    MRILVVEDDLQLAEMLAEVLSDHNYIVDLAEDGEKAWD--YVNTLEYDLVILDVTLPRLD  58
            +RIL+VEDD ++ + +   L++  Y VD   DG+ A    Y NT  Y+LVILD+ LP ++
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENT--YQLVILDIMLPGMN  60

Query  59   GIGFCQRWRGKGEATPVLMLTARDTLADKVTGLDAGADDYMVKPFELPELLARVRAMLRR  118
            G  + +  R+K + TP+LM+TA     +++ ++DA ADDY+ KPF +  LL RV A+LRR
Sbjct  61   GHELLREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  119  SGASVALNLSWGRLHLNPSTYEVTFDNRPLSLTPKEYALLELLVSNGRRVLSRTGIIERI  178
            SGA +A ++  GRL L P  + V  D   L+LT KE+ +L LLV N  R L++  I+ RI
Sbjct  120  SGA-LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  179  WSLEDPPSEETVKSHIKGLRAKLREAGAPDNFIETVHGLGYRLQQA  224
            W+ +      TV +HIK LRAKL     P+N+I T++G+GYRL+++
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYRLEES  219

185) BCA_2021 in NC_012472


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKINEVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

186) BCAH820_1991 in NC_011773


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKINEVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVAIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

187) BCZK1772 in NC_006274


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKINEVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

188) bcf_09635 in NC_016779


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKINEVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

189) BALH_1732 in NC_008600


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKINEVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

190) BcerKBAB4_1824 in NC_010184


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 142/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPKILIVDDDPHIRELVSVFLEREGFQTYEAVDGLDALRKIEEVKVEMAIIDIMMPNMD  60
            M  +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++ I+DIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDLCYELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPLELVVRVKALLKRY  120
            G +L  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGNVLLNRKTFEVNVGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +W
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEELSKFSIRTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E++    I+TIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

191) BcerKBAB4_4419 in NC_010184


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 152/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRIMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVSESPDEESIKIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I+++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

192) Calhy_0173 in NC_014652


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 143/219 (66%), Gaps = 5/219 (2%)

Query  3    RILIVDDDPHIRELVAHFLTLEGFDIYEAANGKDALNILDTVKVDLVILDIMMPEIDGWQ  62
            RIL+V+DD HI + V  FL+  G+++   ++G++A   +     +LVILDIM+P ++G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCHNIRKYYGDIPILMLTVKGETNDKVKGFEVGADDYLVKPFDPIELVARVKALLRRYQI  122
            L +++R    D PILM+T  ++ ++++++F+  ADDY+ KPF    L+ RV ALLRR   
Sbjct  64   LLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SG  121

Query  123  STSQTIKIGELFLNKKTYECRVGEEEILLPPKEFELLFKLASYPGKTFTRDQLIEEIWGY  182
            + ++ I++G L L    +    +  E+ L  KEFE+L+ L    G+T+T++ ++  IWGY
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  183  DYEGDERTVDVHIKRLREKFSKYCIFVIRTIRGLGYRLE  221
            D+EGD  TV+ HIK LR K++     +I+TIRG+GYRLE
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPEN---IIKTIRGVGYRLE  217

193) MC28_1161 in NC_018693


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (510),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 141/219 (65%), Gaps = 5/219 (2%)

Query  7    KILIVDDDPHIRELVSVFLEREGFQTYEAIDGLDALQKIDEVKVDMVILDIMMPNMDGYD  66
            +IL+V+DD HI + V  FL   G+Q     DG +A  K+ E   ++VILDIM+P M+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  67   VCFELRKYYDIPILMLTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQIT  126
            +  E+R   D PILM+TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  127  VSQSIQVGNVLLNRKTFEVTLGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYD  186
            +++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYD
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  187  FEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  225
            FEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

194) CPR_1891 in NC_008262


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 147/221 (67%), Gaps = 4/221 (1%)

Query  1    MNKTVLIVEDEIRIRFLVRDYFKKEGFNVLEASDGEEALRIFSENIVDLAILDIMMPKLD  60
            M+  +L+VED+ +I   VR ++   G++V   +DG+EA   F EN  +L ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLAVCRNIREVSNTPIILLTAKSQEEDKLLGYELGADDYMTKPFSPKVLLAKSKALLRRT  120
            G  + R++R  ++TPI+++TA S++E+++ +++  ADDY+TKPF  ++LL +  ALLRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GTLNDKNILDFNGLTINKLSHEVKLNGEELLLSPKEYDLLIYLSSNEGIALSRDRILDNV  180
            G+L     +    LT+      V  +G EL L+ KE+++L+ L  N G +L+++ IL  +
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYFGDIRTVDTNIKRLREKLLDKANYIATVRGSGYKFE  221
            WGYD+ GD  TV+T+IK LR KL ++   I T+RG GY++E
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLE  217

195) MTES_1459 in NC_015125


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 146/226 (65%), Gaps = 8/226 (3%)

Query  19   PIRVLVVDDEANLSDLLRMALQNEGWDARTAANGQEALNVIREFGPDLLVLDIMMPGLDG  78
            +IR+L+V+D+ ++ + +R  L + G +  + ++G+EA   + E   +L++LDIM+PG++G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  79   MELLTRIRAAGNDAPVLFLTAKDAVEDRIAGISAGADDYVTKPFNLEEVVVRLRGMARRH  138
             ELL  +RA  ND+P+L +TA    E++I ++ A ADDYVTKPF+++ ++ R+ ++ RR 
Sbjct  62   HELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  139  VAAIADADPRLRVGDLSLDEESYEVERGGIPIKLTAKEFELLRYLMQNPRRVLSKAQILD  198
             A   +    +RVG L+L  E + V  +G  + LT KEFE+L  L+QN  R L+   IL 
Sbjct  121  GALAKE----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  199  QVWSYDFGGNGSVVEIYISYLRKKIDSLGEPLIHTVRGVGYTIKAS  244
            ++W+YDF G+GS V+  I  LR K   L E +I T+RGVGY +  S
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAK---LPENIIKTIRGVGYRLEES  219

196) phoP in NC_007168


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 151/232 (66%), Gaps = 15/232 (6%)

Query  1    MSQKVLVVDDEQSIVTLLKYNLETAGYIVEVAYDGEEALEKVNEIQPELVVLDVMLPKKD  60
            MS ++L+V+D++ I   ++  L  AGY V+   DG+EA  K  E   +LV+LD+MLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKTIRSDKNLVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R+ ++  PILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  SKFASEIEKADVDDEDILIENIRIRPEFFEVYKDDELLELTPKEFELLLYLIERQGRVIT  180
            S   + + K      +I +  + + PE F V  D+  L LT KEFE+LL L++ +GR +T
Sbjct  120  S---GALAK------EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  REHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLE  232
            +E +L+ +W Y+F GD+  V+ HI +LR KL EN     +IKT+RG+GY+LE
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

197) regX3 in NC_019425


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/217 (41%), Positives = 149/217 (69%), Gaps = 4/217 (1%)

Query  4    ILVADDDQLIKNMVHFFLTSEGFNVLTASDGDEALEIITKNQIDLAILDVMMPGKTGYQV  63
            IL+ +DD+ I N V+ FL+  G++V + +DG+EA   +  N  +L ILD+M+PG  G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   CQQIRENSSIPVILLTARGEMVDKEVGFQAGTDDYITKPFELKELLFRVNALLRRSQTPN  123
             +++R ++  P++++TA ++  ++  +F+A +DDY+TKPF ++ LL RV+ALLRRS +  
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  124  ETVIQIGQLKIDSQNYLVTLGKKELYLPLKEFEVLHKLASYPKKTFTRDQLIDSIWGFDY  183
               I++G+L + ++++ V  +  EL L  KEFE+L  L     +T+T++ ++  IWG+D+
Sbjct  125  KE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  184  EGNDRTVDVHIKRLREHLTPESGVKISTIRGLGYRLE  220
            EG++ TV+ HIK LR  L PE+ +K  TIRG+GYRLE
Sbjct  184  EGDGSTVHTHIKNLRAKL-PENIIK--TIRGVGYRLE  217

198) irr in NC_012891


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 138/215 (65%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKVVTRDQLMDDIWGYS-  180
             K+ ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

199) irr in NC_018936


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

200) SPYALAB49_001707 in NC_017596


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

201) L897_08600 in NC_021807


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

202) ir in NC_020540


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

203) SPy_2027 in NC_002737


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

204) SpyM51688 in NC_009332


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

205) irr in NC_008022


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

206) M6_Spy1725 in NC_006086


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

207) irr in NC_008024


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

208) irr in NC_017040


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

209) irr in NC_017053


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

210) irr in NC_008023


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

211) SpyM3_1733 in NC_004070


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

212) irr in NC_007297


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

213) irr in NC_007296


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

214) spyM18_2084 in NC_003485


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

215) irr in NC_008021


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

216) Spy49_1677c in NC_011375


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

217) SPs1730 in NC_004606


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 137/215 (64%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKR-QIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K  ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

218) phoP in NC_003909


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

219) BC4589 in NC_004722


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

220) phoP in NC_011725


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

221) BCK_12275 in NC_018491


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

222) phoP in NC_011772


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

223) phoP in NC_011969


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

224) phoP in NC_014171


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

225) phoP2 in NC_018877


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

226) BTG_25920 in NC_018500


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

227) BTF1_21485 in NC_018508


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

228) phoP in NC_017208


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

229) YBT020_22565 in NC_017200


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (506),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTESSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

230) H175_ch4682 in NC_020376


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

231) HD73_4884 in NC_020238


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 151/235 (65%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

232) irr in NC_019042


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 138/215 (65%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K+ ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

233) SDE12394_05215 in NC_017567


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 138/215 (65%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K+ ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

234) irr in NC_018712


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  138 bits (507),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 138/215 (65%), Gaps = 2/215 (0%)

Query  3    KILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLE  62
            +IL+VEDDD I + +  FL    Y+ D   DG+ A  K    +Y+L+ILDIMLP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKTIRKTSDIPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPD  122
            +L+ +R  +D PI+M+TAL D+  Q+ +F+    DYVTKPF   IL+KR+E +LR S + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EKH-QIGDLLVDEIEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYS-  180
             K+ ++G L +   + +V  +GT + LT+KE++I+  L +   + +T++ ++  IWGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  181  ELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGE  215
            E D   ++ HIKNLR K+    +KTI G+GY L E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

235) Cbei_1731 in NC_009617


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 147/221 (67%), Gaps = 6/221 (2%)

Query  5    RILVVDDEPLIRKLVTDFLKKQGYVTIEADDGKKAMNLFSNEENIDLIILDVMLPEYDGF  64
            RIL+V+D+  I + V  FL   GY      DG+ A   F  E+  +L+ILD+MLP  +G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKF-YENTYQLVILDIMLPGMNGH  62

Query  65   TVCREIRKKSKVPIIMLTARGEEFDEVFGLDIGADEYISKPFSPNILIARVNAVLRRANS  124
             + RE+R K+  PI+M+TA +++ +++ ++D  AD+Y++KPF  +IL+ RV+A+LRR+ +
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  125  EDKGKELKDFNGLTIDHSAHQVVIDGEVVDLSPKEYELLIYLSENYGKALSREQILDKVW  184
               +KE++    LT+      V+ DG  + L+ KE+E+L+ L +N G++L++E IL ++W
Sbjct  123  --LAKEIR-VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  185  GYDYYGDLRTVDTHINRLRIKLDRKSDYIQTVRGYGYRFEE  225
            GYD+ GD  TV+THI+ LR KL    + I+T+RG GYR+EE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLEE  218

236) phoP in NC_012659


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

237) phoP in NC_007530


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

238) phoP in NC_003997


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

239) phoP in NC_012581


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

240) H9401_4612 in NC_017729


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

241) BAS4484 in NC_005945


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

242) phoP in NC_012472


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

243) phoP in NC_011658


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

244) phoP in NC_011773


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

245) phoP2 in NC_014335


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

246) phoP in NC_006274


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

247) bcf_22985 in NC_016779


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

248) BCN_4489 in NC_016771


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

249) phoP in NC_008600


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

250) phoP in NC_005957


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (504),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVTETSDEESITIAELKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +           +    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEQNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+ +N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

251) Eab7_2024 in NC_018665


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 149/216 (69%), Gaps = 1/216 (0%)

Query  3    HILIAEDDFDIRELLTELLESSGYQVTSAVNGMEALKLHQTATFDLIILDIMMPFFDGFE  62
            +IL+ EDD +I + +  +L  +GYQV +  +G EA       T++L+ILDIM+P  +G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VAQQIRKTSQTPIIFLTALQDEENQVKGFDLGIDDYIAKPFSlrvllrrieaiirriQTN  122
            + +++R  ++TPI+ +TAL D+ENQ+++FD   DDY++KPF +++LL+R+EA++RR    
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGA  122

Query  123  VEEELSFREITLFPASYNVLISGNAIILTLKEFQILHLLLEHPGRVLEREQLIQQLWGFE  182
            +  E+    +TL+P  + VL  G  + LT KEF+IL LL+++ GR L +E ++ ++WG++
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  AFGDTRFLDTHIKNLRKKINVPYIQTVKGVGYKLEA  218
              GD   ++THIKNLR K+    I+T++GVGY+LE 
Sbjct  183  FEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEE  218

252) Amet_0288 in NC_009633


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 87/214 (41%), Positives = 143/214 (67%), Gaps = 3/214 (1%)

Query  4    ILIIEDEDPIRELIKLNLVMAGYETLEAC-DGEEGLQYLNNEKIDLVLLDVMLPQQDGYT  62
            IL++ED+D I + ++  L  AGY+ ++AC DG+E+   + ++  +LV+LD+MLP  +G  
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQ-VDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LLPKI-LKKNIPTIMLTAKDRLKDKVKGLEMGADDYVTKPFEAMELLARVKCVLRRSDKE  121
            LL  +  K++ P +M+TA     +++++++  ADDYVTKPF    LL RV  +LRRS+  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  KTKIVMDDIEICLDQWKVLKDGKEVDLTYKEFDLLRLLIENKGNVMSRDRLLELVWGYEF  181
               I ++ + +  ++  VL DG E+ LT KEF++L LL++NKG  ++++ +L  +WGY+F
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  182  EGNTRTVDMHIQRLRNKIGADKIKTIYKVGYRME  215
            EG+  TV+ HI+ LR K+  + IKTI  VGYR+E
Sbjct  184  EGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

253) H9401_1853 in NC_017729


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  8    ILIVDDDPHIRELVSVFLECEGFQTYEAIDGLDALQKINQVKVDMVILDIMMPNMDGFDV  67
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ +   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  68   CFELRKYYDIPILILTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  127
              E+R   D PIL++TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  128  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  187
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  188  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  227
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

254) MC28_3867 in NC_018693


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  136 bits (498),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 95/235 (41%), Positives = 150/235 (64%), Gaps = 16/235 (6%)

Query  1    MNNRILVVDDEEFILTLIEFNLQQAGFEVITAMDGEMALQKATTERPDLIILDLMLPKMD  60
            M+ RIL+V+D++ I   +   L +AG++V +  DG+ A  K   +  +L+ILD+MLP M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCKELRLQRVMTPILMLTAKDDEFDKVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ +E+R  +  TPILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TKLQQEEQVAEAPDEDSILIADLKILPEFYEAYFQGRKLELTPKEFELLVYLAKNKSRVL  180
            +          ++    I ++ L +LPE +    +G  L LT KEFE+L+ L +NK+R L
Sbjct  120  S----------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRDQLLSAVWNYDFAGDTRIVDVHISHLRDKIEKNTKKPTYIKTIRGLGYKLEEP  235
            T++ +LS +W YDF GD   V+ HI +LR K+  N      IKTIRG+GY+LEE+
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEES  219

255) Toce_1455 in NC_014377


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  136 bits (501),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 95/222 (43%), Positives = 150/222 (68%), Gaps = 6/222 (2%)

Query  3    EIRILVVDDEEKIVDLVKLYLEKEGFKVDEAHDGQQALDMIAKGEYNLIILDLMLPVIDG  62
             IRIL+V+D++ I + V+ +L   G++VD   DG++A   +    Y+L+ILD+MLP ++G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  63   WTVCKEVRKKSDIPIIMLTARGEEFDKVLGFELGADDYVVKPFSPrelvarvkallrrlG  122
              + +E R K+D PI+M+TA +++ +++ +F+  ADDYV KPF  + L+ RV ALLRR G
Sbjct  62   HELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  123  PKGPEQTLEFPGLVIEPESRTVRADGKEVALTPKEFDLLYFLAKNKEKVFTREKLLEEVW  182
            + + E  +    L + PE  TV  DG E++LT KEF++L +L +NK + +T+E +L  +W
Sbjct  122  ALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GYDFFGSLRTVDTHIKQLREKLGRSKAASYITTVWGVGYKFE  224
            GYDF G   TV+THIK+LR KL    + + I T++GVGY++E
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLE  217

256) BAMEG_2635 in NC_012581


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  136 bits (500),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 141/222 (64%), Gaps = 5/222 (2%)

Query  1    MIPNILIVDDDPHIRELVSVFLECEGFQTYEAIDGLDALQKINQVKVDMVILDIMMPNMD  60
            M   IL+V+DD HI + V  FL   G+Q     DG +A  K+ +   ++VILDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFDVCFELRKYYDIPILILTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRY  120
            G ++  E+R   D PIL++TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  QITVSQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVW  180
              ++++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +W
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYDFEGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLE  222
            GYDFEG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

257) BAA_2025 in NC_012659


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLECEGFQTYEAIDGLDALQKINQVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ +   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILILTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PIL++TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

258) GBAA_1955 in NC_007530


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLECEGFQTYEAIDGLDALQKINQVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ +   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILILTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PIL++TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

259) BA_1955 in NC_003997


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLECEGFQTYEAIDGLDALQKINQVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ +   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILILTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PIL++TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

260) BAS1816 in NC_005945


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  135 bits (497),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 141/220 (65%), Gaps = 5/220 (2%)

Query  34   ILIVDDDPHIRELVSVFLECEGFQTYEAIDGLDALQKINQVKVDMVILDIMMPNMDGFDV  93
            IL+V+DD HI + V  FL   G+Q     DG +A  K+ +   ++VILDIM+P M+G ++
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  94   CFELRKYYDIPILILTAKGETSQKVKGFHLGTDDYLVKPFDPIELVVRVKALLKRYQITV  153
              E+R   D PIL++TA ++  +++++F+  +DDY+ KPF    L+ RV ALL+R   ++
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  154  SQSIQVGTVLLNRKTFEVTIGEQTVTLPLKEFELLFTLGSKAGRTCSREQLIEDVWGYDF  213
            ++ I+VG + L    F V  +   + L  KEFE+L+ L  + GRT ++E ++  +WGYDF
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  214  EGNERTLDVHINRLREKFQEEKSKFSIKTIRGLGYRLEVS  253
            EG+  T++ HI+ LR K+ E+     IKTIRG+GYRLE S
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

261) Cspa_c27970 in NC_020291


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  135 bits (494),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 145/222 (66%), Gaps = 7/222 (3%)

Query  5    KILVVDDEPLIRKLVTDFLKKQGYITVEAEDGKKAMDLFWSEGNIDLIILDVMLPEYDGF  64
            +IL+V+D+  I + V  FL   GY      DG+ A   F  E   +L+ILD+MLP  +G 
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFY-ENTYQLVILDIMLPGMNGH  62

Query  65   TVCREIRKKSKVPIIMLTARGEEFDEVFGLDIGADEYISKPFSPNILIARVNAVLRRAVT  124
             + RE+R K+  PI+M+TA +++ +++ ++D  AD+Y++KPF  +IL+ RV+A+LRR+  
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS-G  121

Query  125  AAETDTDVKKYNGLIVDHNAHQVTIDGSIVDLSPKEYELLAYLSENYGKALSREQILDKV  184
            A   +  V +   L +  +   V  DG+ + L+ KE+E+L  L +N G++L++E IL ++
Sbjct  122  ALAKEIRVGR---LTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  185  WGYDYYGDLRTVDTHINRLRIKLGEKSEFIQTVRGYGYRFEE  226
            WGYD+ GD  TV+THI+ LR KL E  ++I+T+RG GYR+EE
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

262) Aaci_2264 in NC_013205


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 89/219 (41%), Positives = 140/219 (64%), Gaps = 7/219 (3%)

Query  1    MRILLVEDEVRLASALKQLLKEHQYAVDVAHDGETGCDLALTDSYDLAILDIMLPKMSGL  60
            +RILLVED+ ++ ++++ +L E  Y VD   DG+ +      ++Y+L ILDIMLP M+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   DILRAMRKAGLQTPVLLLTAKDTVEDRVTGLDAGADDYLVKPFDNKELLARVRALSRRTG  120
            ++LR  R    +TP+L++TA    E+++ ++DA ADDY+ KPF  + LL RV AL RR+G
Sbjct  63   ELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  QIAGGDAIEAGPFRLDLNTRTVTRNGEPLALTAKEFQLLELFMRNPNKVLSKEVILDRVW  180
             +A    I  G + L  +  TV  +G  L+LT KEF++L L+++N  + L+ E+IL R+W
Sbjct  122  ALA--KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GPDADVIGNAVENYVHFLRKKIDEPDLPSYITTVRGVGY  219
            G D +  G++V+  +  LR K+ E    + I T+RGVGY
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGY  214

263) ANT_22660 in NC_014960


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 146/219 (67%), Gaps = 7/219 (3%)

Query  6    ILLVDDEPSIVSLCRMYLEREGFRVQSAGDGVTALEMLKKSPPDLMILDVMLPELDGFEV  65
            ILLV+D+  I +  R +L   G++V++  DG  A   +  +  +L+ILD+MLP ++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  66   CKQLRAQNDPLPILMLTARDEDYDKILGLELGADDYMTKPFNPRELVARVKAILRRTRHQ  125
             +++RA+ND  PILM+TA  +D ++I +++  ADDY+TKPF+ + L+ RV A+LRR+   
Sbjct  65   LREFRAKNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  126  THEDQNVIRIGNIVVDPARYEVRNGDYLIPLRAQEFEVLCVLARNAGRVLSREQLLEKAW  185
            + E    IR+G + + P  + V  ++  +PL  +EFE+L +L +N GR L++E +L + W
Sbjct  124  AKE----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  186  GFDFYGQTRTVDVHIAQLRRKLADSGVTIETVTGVGYKL  224
            G+DF G+  TV+ HI +LR KL+++   I T+ GVGY+L
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRL  216

264) STH750 in NC_006177


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  134 bits (493),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 153/229 (67%), Gaps = 10/229 (4%)

Query  4    VPERILVVDDEPSILELVAYNLRRAGFEVLTADNGEDGLRIAREEEIDLVILDVMLPGID  63
            ++ RIL+V+D+  I + V   L  AG++V +  +G+++     E+  +LVILD+MLPG++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  64   GFEVLRALRRHSELPVLMLTARGEEIDRVVGFEIGADDYVTKPFSPRELTGRVKAILRRA  123
            G E+LR +R  ++ P+LM+TA +++ +++ +F+  ADDYVTKPF  + L  RV A+LRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  124  RRSAEPQDQDTLVLGPLTINFASYEVLRDGRRVDLTPTEFQILGVLARSPGRVFTRDELV  183
              +A +++   + +G LT+    + VL DG  + LT  EF+IL +L ++ GR +T++ ++
Sbjct  121  --GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  184  DRVMGPDFYGDVRTVDVHIRHLRAKLEENPSEPRLIETVRGVGYRFAGP  232
             R+ G DF GD  TV+ HI++LRAKL EN     +I T+RGVGYR+  +
Sbjct  176  SRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

265) Spico_0394 in NC_015436


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  134 bits (490),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 89/219 (41%), Positives = 148/219 (68%), Gaps = 5/219 (2%)

Query  3    KILVVDDDPHLRELVRIILQKEGFAVYEAADGLEALSKLETSKADLAIIDLMMPNMDGFE  62
            +IL+V+DD H+ + VR +L   G+ V   +DG EA +K+  +  +L I+D+M+P M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCQELRASYDIPVLMLTAKGETAQKIKGFQAGADDYLVKPFEPLELMARVKALLKRYQII  122
            L +E+RA  D P+LM+TA ++  ++I++F+A ADDY+ KPF    L+ RV ALL+R   +
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  ASQNVQIGKLMMNRKNYEVIAGNMkftlplkefellfklAGYPGRTFSRDTLIEDIWGYG  182
            A + +++G+L +   ++ V+ +   + L  KEFE+L+ L    GRT++++ ++  IWGY+
Sbjct  124  AKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  183  FEGNERTLDVHINRLRQRFPEEKTDFRITTIRGLGYRLE  221
            FEG+  T++ HI+ LR ++PE+     I TIRG+GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLE  217

266) AAur_1575 in NC_008711


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  133 bits (488),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 141/222 (64%), Gaps = 9/222 (4%)

Query  33   RILLVEDEQTIADVVRDYLLKAGFQVDMAGDGFTALELAASRQPDLVILDRMLPGLDGVE  92
            RILLVED++ I + VR +L  AG+QVD   DG  A         +LVILD MLPG++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  93   VCRRLRQTMSVPVIMVTALGTEDDRILGLEMGADDYVTKPFSPRELVLRVKSVLRRSIKE  152
            + R +R     P++M+TAL+ ++++I +++  ADDYVTKPF  + L+ RV ++LRRS   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG--  121

Query  153  FAPEPPVEAAGLELDPASRTVTHGGVPLALTVREFDLLAFMMRRPNQVFSREELIKAVWG  212
             A    +  + L L P   TV  +G  L+LT +EF++L ++++   + +++E ++  +WG
Sbjct  122  -ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  213  WDF-GDLSTVTVHVRRLREKIEANPTKPELLKTVWGVGYRFD  253
             DF GD STV  H++ LR K+  N     ++KT++GVGYR++
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

267) Thal_0320 in NC_013894


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  133 bits (489),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 90/216 (42%), Positives = 135/216 (63%), Gaps = 3/216 (1%)

Query  3    RILLVEDDLYLGQMMVEGLRHEGFTVEWVQDGFTALRRVVEENYDLVILDIMLPKFDGMK  62
            RILLVEDD  + + +   L + G+ V+   DG  A  +  E+ Y+LVILDIMLP  +G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRKIRETKDIPVIMVTARSQIEDKVEGLSAGADDYITKPFSFKELSARIQAVLRRYRKK  122
            + R +R  +D P++M+TA S+ E+++ ++ A ADDY+TKPF  + L  R++A+LRR    
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  EGVIMVGDLRIDPSAVEVTYRGQKIHLTRREFELLKLLAENANRVVSREEIYAKVWGYSH  182
               I VG L + P    V   G  + LTR+EFE+L LL +N  R +++E I +++WGY  
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  183  EEGSNIVDVYIKNLRNKLGDKPPRLIQTVRGYGYIL  218
            E +++ V+  IKNLR KL   P  +I+T+RG GY L
Sbjct  184  EGDGSTVHTHIKNLRAKL---PENIIKTIRGVGYRL  216

268) SLGD_01236 in NC_013893


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  133 bits (488),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 148/232 (64%), Gaps = 15/232 (6%)

Query  1    MSQKILVVDDEQSIVTLLKYNLETAGYIVEVAYDGEEALEKVEKVQPDLIVLDVMLPKKD  60
            MS +IL+V+D++ I   ++  L  AGY V+   DG+EA  K      +L++LD+MLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKTIRSDKNLVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R+ ++  PILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  SQFVneaandaaneedILIENIRIRPEFFEVYKDDELLELTPKEFELLLYLIERQGRVIT  180
            S          A   +I +  + + PE F V  D+  L LT KEFE+LL L++ +GR +T
Sbjct  120  SG---------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  REHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLE  232
            +E +L+ +W Y+F GD+  V+ HI +LR KL EN     +IKT+RG+GY+LE
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

269) phoP in NC_017353


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  133 bits (488),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 148/232 (64%), Gaps = 15/232 (6%)

Query  1    MSQKILVVDDEQSIVTLLKYNLETAGYIVEVAYDGEEALEKVEKVQPDLIVLDVMLPKKD  60
            MS +IL+V+D++ I   ++  L  AGY V+   DG+EA  K      +L++LD+MLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKTIRSDKNLVPILMLTAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRR  120
            G E+ + +R+ ++  PILM+TA  D+ +++ +++  ADDY+TKPF  + ++ RV A+LRR
Sbjct  61   GHELLREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  SQFVneaandaaneedILIENIRIRPEFFEVYKDDELLELTPKEFELLLYLIERQGRVIT  180
            S          A   +I +  + + PE F V  D+  L LT KEFE+LL L++ +GR +T
Sbjct  120  SG---------ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  REHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLE  232
            +E +L+ +W Y+F GD+  V+ HI +LR KL EN     +IKT+RG+GY+LE
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

270) EAT1b_0324 in NC_012673


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 92/218 (43%), Positives = 142/218 (66%), Gaps = 3/218 (1%)

Query  1    MRILIVEDDPSILRLVKETFEDAGHEVLTATDGNTGEELFTTQPIDAAIVDIMLPGLDGR  60
            +RIL+VEDD  I   V+  + +AG +V + TDGN +   F  +  +  I+DIMLPG++G+
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   ELCRRLKATLDIPVILLTALDEWEDKRQGFELGADDYVTKPFIPEELLFRLQAVSRRYQR  120
            EL R ++A  D P++++TAL + E++ ++F+  ADDYVTKPF  + LL R++A+ RR   
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SG  121

Query  121  SAASQIQAGPLRLDLREYEVTLEGQLFYLPKKEFELLFQLASFPGRVYRREELIELVWGF  180
            + A +I+ G L L   ++ V  +G  + L +KEFE+L+ L    GR   +E ++  +WG+
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  181  DFEGDERTVDVHIKRLRNRFDHPALTIRTVRGVGYALE  218
            DFEGD  TV+ HIK LR ++  P   I+T+RGVGY LE
Sbjct  182  DFEGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLE  217

271) Apre_1374 in NC_013171


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 90/219 (42%), Positives = 142/219 (65%), Gaps = 7/219 (3%)

Query  2    IYVVEDDKSIRNLVEYALREKGYEVAGYEDGSQIVSDVKDSPGELLILDIMLPEKDGITI  61
            I +VEDD  I N V   L E GY+V +  DG++  +   ++  +L+ILDIMLP  +G  +
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  62   LKEIREFSDIPIIMLTARTDEFDKVMGLDLGADDYITKPFSILELISRVKAVLRRSKKKD  121
            L+E+R  +D PI+M+TA +D+ +++ ++D  ADDY+TKPF +  L+ RV A+LRRS    
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  122  TDHISYKEVRLNMKKR--SVKVDGVKIDLTYKEFEMLLLFMSNIGNVITRDDFLLKVWGY  179
             +    +  RL +     +V  DG  + LT KEFE+LLL++ N G  +T++ +L ++WGY
Sbjct  125  KE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  180  DYEGETRTVDVHIASLRAKLKNAGKYIETVRNLGYKFGE  218
            D+EG+  TV+ HI +LRAKL  + + I T+R +GY++ E
Sbjct  182  DFEGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLEE  218

272) phoB in NC_016077


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  132 bits (483),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 143/220 (65%), Gaps = 8/220 (3%)

Query  1    MEDDENIRELVAYALESQQFETQTFADGESFYKVLEKKIPDLVLLDIMLPGESGIEILKK  60
            +EDD++I + V   L    ++ ++ +DG+  Y  +  +  +LV+LDIMLPG +G E+L+ 
Sbjct  8    VEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLRE  67

Query  61   IRHKERTADLPVIMLTARTSEYDVVKGLTIGADDYVTKPFGILELISRIRAVLRRSHRVE  120
            +R K+ T   P++M+TA + + + ++++   ADDYVTKPF +  L+ R+ A+LRRS  + 
Sbjct  68   FRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  121  KPSEMLVCGPVTLDPLKHAVSAYGEEVMLTAKEFELLHYLMMNVGIVLQREQIMESVWGF  180
            K   +   G +TL P   +V   G E+ LT KEFE+L  L+ N G  L +E I+  +WG+
Sbjct  125  KEIRV---GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  181  TYAGESRTIDMHIKSLRQKLGEGGQIIKTIRGVGYRLDEP  220
             + G++ T++ HIK+LR KL E  +IIKTIRGVGYRL+E+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEES  219

273) Clole_0645 in NC_015275


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  130 bits (478),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 88/216 (41%), Positives = 146/216 (68%), Gaps = 8/216 (3%)

Query  4    ILIVEDEVAINDLVKLNLHLVGHQCTSVFEGKSAIFAIQRESYDLIILDIMLPELDGFEV  63
            IL+VED+  I + V+  L   G Q  +  +G+ A   +  ++Y+L+ILDIMLP ++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   IKQ---VNQTPTIFLTAKNSLQSRIQGFSLGADDYITKPFEMLELLARVEAILRRTQKAS  120
            +++    N+TP + +TA +  +++I++F   ADDY+TKPF M  LL RVEA+LRR+   +
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  121  KYFEIRNVKIDF--DSHQVFYNGQLVDFTPKEYNLLEVLINNRNIALSRERLLELVWGYD  178
            K  EIR  ++ +  +   V+ +G  + +T KE+++L +L++N+  +L++E +L  +WGYD
Sbjct  125  K--EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  179  FEGDTRTVDVHIQKLRKKLSWEGVIKTVYKLGYRLE  214
            FEGD  TV+ HI++LR KL+ E +IKT+  +GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLP-ENIIKTIRGVGYRLE  217

274) Gobs_2351 in NC_013757


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  130 bits (476),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 144/221 (66%), Gaps = 7/221 (3%)

Query  11   VLIIEDDDRIRRVVSITLRREGLEVTEAGSGEEGLARLAERPYDIVLLDLVLPGRSGLEV  70
            +L++EDDD+I   V   L   G +V     G+E+ +++ E  Y++V+LD++LPG +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  71   CREIRRVSTTPVIMVTARADSSDVIAGLEAGADDYVTKPFVAEELSARIRALARRTGGSG  130
             RE+R  + TP++M+TA +D  + I +++A ADDYVTKPF  + L  R+ AL RR+G+ +
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  131  PRPRIVVGDLEIAPADGVVTRGGEVVPltrteftlllelateRGRVFSREELLERVWGYD  190
               R  VG L + P D  V  +G  +PLTR EF +LL L  ++GR +++E +L R+WGYD
Sbjct  125  KEIR--VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  191  YFGDSRLVDVHVRRLRKKVEADPAAPTVVTTVRGMGYRLPE  231
            + GD+  V+ H++ LR K+     +  ++ T+RG+GYRL E
Sbjct  183  FEGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYRLEE  218

275) Slip_0097 in NC_014220


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  130 bits (475),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 88/207 (43%), Positives = 136/207 (66%), Gaps = 8/207 (3%)

Query  19   RLYLEKEGYAVEAAWDGEEALSKFRSNNPDLVILDIMLPKKDGWTVCREIRAMSNAPIIM  78
            R +L   GY V+A  DG+EA +KF  N  +LVILDIMLP  +G  + RE+RA +++PI+M
Sbjct  19   RAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLREFRAKNDTPILM  78

Query  79   LTAKGEESDRVLGLDLGADDYVCKPFSPIELVARVKAVLRRTSLANQDGNRVLFYPGLTV  138
            +TA +++ +++ ++D  ADDYV KPF    L+ RV A+LRR++   ++  RV     LT+
Sbjct  79   MTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALAKE-IRV---GRLTL  134

Query  139  NYDSHLVEVDGRRVSLTPKEFELLWFLASHPGKVYSREQLLSYVWDYDYLGDPRTVDTHI  198
              +   V  DG  ++LT KEFE+L +L  + G+  ++E +LS +W+YD+ GD  TV+THI
Sbjct  135  LPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHI  194

Query  199  KRLREKLESGVKQRYIRTVWGRGYKFE  225
            K LR KL   +    I+T++G GY++E
Sbjct  195  KNLRAKLPENI----IKTIRGVGYRLE  217

276) SEQ_1549 in NC_012471


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 96/233 (42%), Positives = 149/233 (64%), Gaps = 15/233 (6%)

Query  1    MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLD  60
            M+ R+LLV+D++ I   +   LA  G+  +  TDG  A +    + Y++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGSKTPIMMVSAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRR  120
            G E+ + +RAK + TPI+M++A SD+ +++ A++  ADDYVTKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPLTPKEYELLLYLMKHPNMTLT  180
            +    ++ + E R     +++L L PE   V  D   LPLT KE+E+LL L+++   TLT
Sbjct  120  S----GALAKEIR-----VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKE  233
            +E +L RIWGYDF  +   V+ HI +LR K+ +N      I+TIRG GY++ E
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

277) phoB1 in NC_017582


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 96/233 (42%), Positives = 149/233 (64%), Gaps = 15/233 (6%)

Query  8    MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLD  67
            M+ R+LLV+D++ I   +   LA  G+  +  TDG  A +    + Y++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  68   GIEVCKRLRAKGSKTPIMMVSAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRR  127
            G E+ + +RAK + TPI+M++A SD+ +++ A++  ADDYVTKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  128  TEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPLTPKEYELLLYLMKHPNMTLT  187
            +    ++ + E R     +++L L PE   V  D   LPLT KE+E+LL L+++   TLT
Sbjct  120  S----GALAKEIR-----VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  188  RERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKE  240
            +E +L RIWGYDF  +   V+ HI +LR K+ +N      I+TIRG GY++ E
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

278) SZO_06010 in NC_012470


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 96/233 (42%), Positives = 149/233 (64%), Gaps = 15/233 (6%)

Query  1    MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLD  60
            M+ R+LLV+D++ I   +   LA  G+  +  TDG  A +    + Y++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGSKTPIMMVSAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRR  120
            G E+ + +RAK + TPI+M++A SD+ +++ A++  ADDYVTKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TEAEISGDGEERREPFYTMSQLRLYPERHEVYKDKELLPLTPKEYELLLYLMKHPNMTLT  180
            +    ++ + E R     +++L L PE   V  D   LPLT KE+E+LL L+++   TLT
Sbjct  120  S----GALAKEIR-----VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  181  RERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKE  233
            +E +L RIWGYDF  +   V+ HI +LR K+ +N      I+TIRG GY++ E
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

279) Dacsa_0514 in NC_019780


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 93/232 (41%), Positives = 147/232 (64%), Gaps = 16/232 (6%)

Query  1    MMPRILVIDDDPAISELVTINLEMAGYTVEPANDGIKGQALAVQLQPDLIMLDLMLPRVD  60
            M  RIL+++DD  I + V   L  AGY V++  DG  + +   +   +L++LD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLTVCQRLRRDERT-ADIPVLMLTALGQTQNKVEGFNAGADDYLTKPFEVEEMLARVRAL  119
            G    + L R+ R+  D P+LM+TAL++ +N++ +F+A ADDY+TKPF ++ +L RV AL
Sbjct  61   G----HELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEAL  116

Query  120  LRRTDRIPKAARHSEILNYGPLTLVPERFEAIWFGKTVKLTHLEFELLHCLLQRHGQTVS  179
            LRR++ ++K  R       G LTL+PE F  +  G  + LT+ EFE+L  L+Q  G+T++
Sbjct  117  LRRSGALAKEIRV------GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  PSDILKEVWGYDPDDDIETIRVHIRHLRTKLEPEPRHPMYIKTVYGAGYCLE  231
               IL  +WGYD ++D  T++ HI++LR+KL  +      IKT+ G GY LE
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLE  217

280) BN6_74520 in NC_019673


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 137/220 (63%), Gaps = 5/220 (2%)

Query  23   MTRRVLVVEDDLTIASSVAARLRAEGFDVDLAHDGPSAVAK--AGNADLVVLDVMLPGFD  80
            M+ R+L+VEDD  I ++V A L   G++VD   DG  A +K      +LV+LD+MLPG +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  81   GLEVCRRIQAERPVPVLMLTARGDETDLLVGLAVGADDYLTKPFSIRELAARVHALLRRV  140
            G E+ R ++A    P+LM+TA +D+ + + ++   ADDY+TKPF ++ L  RV+ALLRR 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  141  ERSAAPPTRISVADVEIDLAERRVLRAGEEAHLTPTEFELLVHLAERPRAVQSRERLLSA  200
              S+A +  I V+ + +   +  VL  G E  LT  EFE+L+ L +      ++E +LS 
Sbjct  120  --SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  201  VWGWPDGTGTRTVDSHIKALRRKLGTDLIRTVHGVGYALE  240
            +WG     +  TV++HIK LR KL  ++I+T++GVGY LE
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

281) phoP in NC_011134


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 95/233 (41%), Positives = 149/233 (64%), Gaps = 15/233 (6%)

Query  8    MTKRVLLVDDEEPILRLLDYHLAKEGFVTEMVTDGRTALALAEREPYDFIVLDIMLPQLD  67
            M+ R+LLV+D++ I   +   LA  G+  +  TDG  A +    + Y++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  68   GIEVCKRLRSKGSKTPIMMVSAKSDEFDKVLALELGADDYVTKPFSPRELLARVKAILRR  127
            G E+ + +R+K + TPI+M++A SD+ +++ A++  ADDYVTKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  128  TEAEISGDGEEHREPFYTMSQLRLYPERHEVYKDKELLPLTPKEYELLLYLMKHPNMTLT  187
            +    ++ + E R     +++L L PE   V  D   LPLT KE+E+LL L+++   TLT
Sbjct  120  S----GALAKEIR-----VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  188  RERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGYGYKFKE  240
            +E +L RIWGYDF  +   V+ HI +LR K+ +N      I+TIRG GY++ E
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

282) Ferpe_0988 in NC_017095


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 81/195 (42%), Positives = 137/195 (71%), Gaps = 2/195 (1%)

Query  26   HAGYKVASFDNGIDALENFKQLAPDLVILDIMLPDMDGYEIAQNLRKLSPDVLILMLTAL  85
            +AGY+V +  +G +A  +F + + +LVILDIMLP+M+G E+ +++R    D  ILM+TAL
Sbjct  24   EAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLREFRA-KNDTPILMMTAL  82

Query  86   GMKKDKLTGFESGADDYLTKPFDNEEllarikallrrkHIDVSRPYRIGRLEIYEDRRTV  145
            +   +++ +F++ ADDY+TKPF + ++L +    L R+   +++  R+GRL +  +  TV
Sbjct  83   SDDENQIRAFDAEADDYVTKPF-KMQILLKRVEALLRRSGALAKEIRVGRLTLLPEDFTV  141

Query  146  YYDGKEIDLTKTEFELLMYLVKNRNRAVSKEEILNAVWGIDYYGSDNTVEVYINYLRKKL  205
              DG E+ LT+ EFE+L+ LV+N+ R+++ E IL+ +WG D+ G ++TV+  I+ LR KL
Sbjct  142  LCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKL  201

Query  206  SPDLIKTVRGIGYRL  220
            + ++IKT+RG+GYRL
Sbjct  202  PENIIKTIRGVGYRL  216

283) BBR47_03530 in NC_012491


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 87/217 (41%), Positives = 138/217 (64%), Gaps = 5/217 (2%)

Query  3    ILAVEDEKALLQTIAGVLADEGYQVDMADRGDDGLLLAERGIYDLLVLDIMMPGMDGLSL  62
            IL VED+  + +T+ + LA+ GYQVD    G+++        Y+L++LDIM+PGM+G  L
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  63   VRTLRTKGIMTPVLFLTAKDSVESRVEGLDAGADDYLVKPFAAEELTARVRALLRRQGKQ  122
            +R +R+K   TP+L +TA    E+++ ++DA ADDY+ KPF  + L  RV ALLRR G  
Sbjct  65   LREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  NTEGELAYGPLSLKINEYDGFVDDEPMKLTTKEYELLKYFLQNREQILTRQQIFDRVWGI  182
              E  +  G L+L  +++  + D+  + LT KE+E+L  ++QN+ + LT++ I+ R+WG 
Sbjct  124  AKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  183  DSEANYGVVDLYVHYLRKKLGAYEGFIRTIRNVGYIL  219
            D E++ + V+  +  LR KL   E +I+TIR VGY L
Sbjct  182  DFEGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRL  216

284) HM1_1535 in NC_010337


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  128 bits (468),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 145/223 (66%), Gaps = 7/223 (3%)

Query  1    MRILLAEDDQRLGKLIDHMLRREGHDVDWVQRGDDAYHYAKASHYDLLVLDWMMPAMDGV  60
            +RILL EDD+++ + +   L   G +VD    G++AY     + Y+L++LD M+P+M+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   ILCRQLRQEGLQCPILMLTAKDAVEDRVQGLDAGADDYLVKPFASAELMARLRALSRRGK  120
             L R++R    + PILM+TA    E++++++DA ADDY+ KPF    L+ R+ AL RR+ 
Sbjct  63   ELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  IPLQEEIVQVADLLLNRNRHSVTRGGKEITLTSREFALLDLLVQNKGQVLPRELIMERVW  180
             +L  EI +V+ L L  +  +V  +G E+ LT +EF +L LLVQNKG+ L +E+I+ R+W
Sbjct  122  -ALAKEI-RVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GLDADVTDNTLDAYIRLLRKKIEPPGAAKLIHNIRGVGYTLEE  223
            G D +  ++T+++ I+ LR K+    + ++I  IRGVGY LEE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

285) Ocepr_1908 in NC_014761


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  127 bits (466),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 136/220 (62%), Gaps = 4/220 (1%)

Query  1    MPERVLVVDDDPNLLRLVEANLRARGYAVDTAASGEAALERLRMAGYACVLLDLMLPGVD  60
            M+ R+L+V+DD ++   V A L   GY VD+ + G+ A  ++    Y  V+LD+MLPG++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMTVIREARGFCDVPIVVMSALGEEERKVEALDLGADDYLVKPFGVAELLARVRAAIRRY  120
            G  ++RE R+  D PI++M+AL+++E ++ A+D  ADDY+ KPF +  LL RV A +RR 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GVLGPAEGLRAGVLELDPGGGYALVAGRRVRLTPMEYALLRQFVLARGRTLTHEELLDAV  180
            G L  A  +R G L L P +   L  G  + LT  E+ +L  +V  +GRTLTHE +L  +
Sbjct  121  GAL--AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGRG-AGEDHYLHVYVGRLRRKLGPSVAIESLPGVGYRLD  219
            WG +  G++  +H  +  LR KL P   I ++ GVGYRL+
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL-PENIIKTIRGVGYRLE  217

286) CKL_2350 in NC_009706


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  127 bits (464),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 147/223 (66%), Gaps = 6/223 (2%)

Query  1    MNKTVLMVDDEERMRLLIEAYLKREGLKVLLAENGEEALRKFKENHVDLVVLDIMMPLMD  60
            M+  +L+V+D++++   + A+L   G +V    +G+EA  KF EN  +LV+LDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWTVCRELRKISNVPIIMLTARGEDEDQLLGFQLGTDSYVTKPVSPKILVAKIKALLRRT  120
            G  + RE+R  ++ PI+M+TA ++DE+Q+ +F+  +D YVTKP   +IL+ ++ ALLRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  YYDEINQVKDNTYDGLFINEEGHEVKIDGENIYLSPKEFEFLCYLIKNKDIVLSREKILD  180
                    K+   + L +  E+  V  DG ++ L+ KEFE+L  L++NK+  L++E IL 
Sbjct  121  ----GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  AIWGIDYYGDLRTVDTHVKRLREKLGVKSYLITTVRGVGYKFE  223
             IWG D+ GD  TV+TH+K LR KL  +  +I T+RGVGY++E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

287) CKR_2070 in NC_011837


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  127 bits (464),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 147/223 (66%), Gaps = 6/223 (2%)

Query  1    MNKTVLMVDDEERMRLLIEAYLKREGLKVLLAENGEEALRKFKENHVDLVVLDIMMPLMD  60
            M+  +L+V+D++++   + A+L   G +V    +G+EA  KF EN  +LV+LDIM+P M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWTVCRELRKISNVPIIMLTARGEDEDQLLGFQLGTDSYVTKPVSPKILVAKIKALLRRT  120
            G  + RE+R  ++ PI+M+TA ++DE+Q+ +F+  +D YVTKP   +IL+ ++ ALLRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  YYDEINQVKDNTYDGLFINEEGHEVKIDGENIYLSPKEFEFLCYLIKNKDIVLSREKILD  180
                    K+   + L +  E+  V  DG ++ L+ KEFE+L  L++NK+  L++E IL 
Sbjct  121  ----GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  181  AIWGIDYYGDLRTVDTHVKRLREKLGVKSYLITTVRGVGYKFE  223
             IWG D+ GD  TV+TH+K LR KL  +  +I T+RGVGY++E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPEN--IIKTIRGVGYRLE  217

288) phoP1 in NC_014974


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  127 bits (464),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 90/223 (41%), Positives = 143/223 (65%), Gaps = 9/223 (4%)

Query  1    MRVLLVDDDPALLEVLGAYLRGAGFEVLEAKDGEKALELF--PRADLIILDLMLPKLDGF  58
            +R+LLV+DD  + + + A+L  AG++V    DG+ A   F     +L+ILD+MLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG-  61

Query  59   KvleevrrerpelpILMLTARGEEEERVKGLELGADDYVVKPFSPKEVVARVKALLRRAG  118
              L    R + + PILM+TA +++E+++++++  ADDYV KPF  + ++ RV ALLRR+G
Sbjct  62   HELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  119  -LKEELCYGPLRLLPKERQAYLEGKPLPLSQLEFDLLLTLAQHPGMVFTRERLLEKVWGP  177
             L  E+  G L LLP +     +G  LPL++ EF++LL L Q+ G  +T+E +L ++WG 
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGY  181

Query  178  DFPGIDRVVDVHIAALRKKLMDDPENPRFIETVRGVGYRFREG  220
            DF G +  V+ HI  LR KL ++     +I T+RGVGYR+ E+
Sbjct  182  DFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

289) CCU_10100 in NC_021018


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 94/224 (42%), Positives = 155/224 (70%), Gaps = 7/224 (3%)

Query  1    MAVHIYIVEDDKNIREIEMFALKNSGYAVEEFENAKSFFSRSAEKVPDLVLLDIMLPDMD  60
            M+++I +VEDD +I +     L ++GY V+   +++  +++  E+  +LV+LDIMLP+M+
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEIVKKLRSRPDTVRVPIILVTAKTTELDKVKGLDIGADDYLTKPFGVMELISRVKALL  120
            G E+++ +R++ DT   PI+++TA + + ++++++D  ADDY+TKPF +  L+ RV ALL
Sbjct  61   GHELLREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL  117

Query  121  RRSRALQDDKQLVLGDITLDSERREVHVGGelceltfkefellkllMVNAGIVLHRDTIM  180
            RRS AL   K++ +G +TL +E   V  +G    LT KEFE+L LL+ N G  L ++ I+
Sbjct  118  RRSGAL--AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  181  SDVWGTDYEGESRTLDMHIKTLRQKLGEAGNMIKTVRNVGYKME  224
            S +WG D+EG++ T++ HIK LR KL E  N+IKT+R VGY++E
Sbjct  176  SRIWGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

290) BBR47_03300 in NC_012491


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 144/222 (65%), Gaps = 5/222 (2%)

Query  1    MKLTILIADDDPHVRELLRFYLAKEGYNVLACVDGEEASQLLEQESVQLAIVDVMMPGKN  60
            M + IL+ +DD H+ + +R +LA  GY+V AC DG+EA   + +++ QL I+D+M+PG N
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWELCREIREFYDLPVILLTAKGEVRDKEKGFLAGTDDYLTKPFEPTELLYRIKALLRRY  120
            G EL RE+R   D P++++TA ++  ++ ++F A +DDY+TKPF    LL R+ ALLRR 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  QMVSKQIIVLNDTVIDRISHVVKVKEELIHLPLKEFELLAQLASFPDRIFTRDQLLELVW  180
              ++K+I V   T++     V+    EL  L  KEFE+L  L    +R +T++ +L  +W
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTEL-PLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GGDTESDSRTIDVHIKRLREKFTEKTNDFVISTVRGLGYKLE  222
            G D E+D+ T++ HIK LR K+ E+    +I T+RG+GY+LE
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLE  217

291) CK3_01800 in NC_021035


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 143/215 (67%), Gaps = 5/215 (2%)

Query  7    VEDDKNILEIEMFALKNSGYQVEGFECARDFYKKLEEKQPDLALLDIMLPDEDGLEIVAK  66
            VEDD +I +     L ++GYQV++   + + Y K+ E+  +L +LDIMLP+ +G E++  
Sbjct  8    VEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLRE  67

Query  67   LRRRPETKKLPIIMVTAKSTEIDKVKGLDVGADDYLTKPFGVMELIARVKAVLRRTMEED  126
            +R + +T   PI+M+TA S + ++++++D  ADDY+TKPF +  L+ RV A+LRR+    
Sbjct  68   FRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  127  KFLTLGDIFLDDEKHMVYVKDVPCSLTFKEYELLKLLLHNAGIVVTREIILERVWGIDFE  186
            K + +G + L  E   V   +   +LT KE+E+L LL++N G  +T+EIIL R+WG DFE
Sbjct  125  KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFE  184

Query  187  GESRTLDMHIRTLRQKLGEAGSMIRTVRNVGYMIE  221
            G++ T++ HI+ LR KL E  ++I+T+R VGY +E
Sbjct  185  GDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

292) phoP in NC_019042


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 149/234 (64%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+  G+  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RAK   TPI+M++A SD+ +++ A++  ADDY+TKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E          RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKEI---------RV-GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF  +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

293) SDE12394_02985 in NC_017567


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 149/234 (64%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+  G+  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RAK   TPI+M++A SD+ +++ A++  ADDY+TKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E          RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKEI---------RV-GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF  +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

294) phoP in NC_012891


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 149/234 (64%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+  G+  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RAK   TPI+M++A SD+ +++ A++  ADDY+TKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E          RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKEI---------RV-GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF  +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

295) phoP in NC_018712


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  126 bits (463),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 95/234 (41%), Positives = 149/234 (64%), Gaps = 16/234 (6%)

Query  1    MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLD  60
            M+ +ILLV+D++HI   +   L+  G+  +  TDG  A T    + +++++LDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GIEVCKRLRAKGIKTPIMMVSAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRR  120
            G E+ + +RAK   TPI+M++A SD+ +++ A++  ADDY+TKPF  + LL RV A+LRR
Sbjct  61   GHELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  121  TSKEQQEddtddfrddYRVFGALTVYPDRHEVYKADHLLSLTPKEFELLLYLMKHPNMTL  180
            ++   +E          RV G LT+ P+   V   +  L+LT KEFE+LL L+++   TL
Sbjct  120  SGALAKEI---------RV-GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTL  169

Query  181  TRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKE  234
            T+E +L RIWGYDF  +   V+ HI +LR K+ +N     +I+TIRG GY++ E
Sbjct  170  THEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

296) Mahau_0744 in NC_015520


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  125 bits (458),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 151/224 (68%), Gaps = 13/224 (5%)

Query  6    ILVVDDEAHILELIRFNLENAGYKVEVAEDGETA-LKFCRQQVPDLIILDIMLPGIDGLE  64
            IL+V+D+ HI + +R  L +AGY+V+   DG+ A  KF  ++  +L+ILDIMLPG++G E
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFY-ENTYQLVILDIMLPGMNGHE  63

Query  65   VCKTLRASVATAKVPIIMLTAKGEEIDKVVGLEIGADDYIAKPFGIRELIARVKALLRRT  124
            +   LR   A    PI+M+TA +++ +++ +++  ADDY++KPF ++ L+ RV ALLRR+
Sbjct  64   L---LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  125  ENNDMEPKIIKVGGLTIDTSKYEVYKNGNkldftlkefellkllvlNQGKVLSRDYLLDQ  184
                 E   I+VG LT+    + V  +G  L +T KEFE+L LLV N+G+ L+++ +L +
Sbjct  121  GALAKE---IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  185  VWGYEYFGETRTVDVHIRHIRQKLGDDMDEAKYIETIRGVGYKF  228
            +WGY++ G+  TV+ HI+++R KL +++     I TIRGVGY++
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRL  216

297) SSU98_1672 in NC_009443


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 70/169 (42%), Positives = 114/169 (68%), Gaps = 1/169 (0%)

Query  3    RILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLE  62
            RIL+VEDD  I + V  FL E GYQV++  DG+ A  +F E+ ++L++LDIM+P+M G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGE-  121
            +L+E+R  ++ PILM+TA++D+  Q+ +F+    DYV KPF   IL+KR+E +LR  G  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  TDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLAKRRGKIVSRA  170
            +  I +G + + P   +V  +  E+ LT+KE+E+LL L + +G+ +++ 
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

298) Dvul_1911 in NC_008751


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 146/225 (65%), Gaps = 10/225 (4%)

Query  5    RILVVEDDEDILQLLRFTLEAAGFEVVTAATGRDGLESAQRHVPGLVLLDLMLPGMSGFD  64
            RIL+VEDD++I + +R  L  AG++V + + G ++      +   LV+LD+MLPGM+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VCRELKRTPATEHVPVIMLTARGEEVDRIVGLELGADDYVIKPFSPRELVLRIRAVLKRV  124
            + RE++   A ++ P++M+TA +++ ++I +++  ADDYV KPF  + L+ R+ A+L+R 
Sbjct  64   LLREFR---AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  125  TGAQEPAPRGQWNVDGLFLDEEAHRVEVDGEEALLTATEFRLLAELVRNRGRVRTRDQLL  184
            +GA     R    V+ L L  E   V  DG E  LT  EF +L  LV+N+GR  T++ +L
Sbjct  120  SGALAKEIR----VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  185  NTVWGYEFEGYARTVDTHVRRLRQKIGRFAAMIETIRGVGYRFKE  229
            + +WGY+FEG + TV+TH++ LR K+     +I TIRGVGYR+ E
Sbjct  176  SRIWGYDFEGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRLEE  218

299) phoB in NC_002937


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 146/225 (65%), Gaps = 10/225 (4%)

Query  5    RILVVEDDEDILQLLRFTLEAAGFEVVTAATGRDGLESAQRHVPGLVLLDLMLPGMSGFD  64
            RIL+VEDD++I + +R  L  AG++V + + G ++      +   LV+LD+MLPGM+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VCRELKRTPATEHVPVIMLTARGEEVDRIVGLELGADDYVIKPFSPRELVLRIRAVLKRV  124
            + RE++   A ++ P++M+TA +++ ++I +++  ADDYV KPF  + L+ R+ A+L+R 
Sbjct  64   LLREFR---AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  125  TGAQEPAPRGQWNVDGLFLDEEAHRVEVDGEEALLTATEFRLLAELVRNRGRVRTRDQLL  184
            +GA     R    V+ L L  E   V  DG E  LT  EF +L  LV+N+GR  T++ +L
Sbjct  120  SGALAKEIR----VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  185  NTVWGYEFEGYARTVDTHVRRLRQKIGRFAAMIETIRGVGYRFKE  229
            + +WGY+FEG + TV+TH++ LR K+     +I TIRGVGYR+ E
Sbjct  176  SRIWGYDFEGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRLEE  218

300) Deval_1001 in NC_017310


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 91/225 (41%), Positives = 146/225 (65%), Gaps = 10/225 (4%)

Query  5    RILVVEDDEDILQLLRFTLEAAGFEVVTAATGRDGLESAQRHVPGLVLLDLMLPGMSGFD  64
            RIL+VEDD++I + +R  L  AG++V + + G ++      +   LV+LD+MLPGM+G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  65   VCRELKRTPATEHVPVIMLTARGEEVDRIVGLELGADDYVIKPFSPRELVLRIRAVLKRV  124
            + RE++   A ++ P++M+TA +++ ++I +++  ADDYV KPF  + L+ R+ A+L+R 
Sbjct  64   LLREFR---AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  125  TGAQEPAPRGQWNVDGLFLDEEAHRVEVDGEEALLTATEFRLLAELVRNRGRVRTRDQLL  184
            +GA     R    V+ L L  E   V  DG E  LT  EF +L  LV+N+GR  T++ +L
Sbjct  120  SGALAKEIR----VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  185  NTVWGYEFEGYARTVDTHVRRLRQKIGRFAAMIETIRGVGYRFKE  229
            + +WGY+FEG + TV+TH++ LR K+     +I TIRGVGYR+ E
Sbjct  176  SRIWGYDFEGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRLEE  218

301) Mesil_0142 in NC_014212


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 95/221 (43%), Positives = 144/221 (66%), Gaps = 9/221 (4%)

Query  3    RVLLVDDDPAIREVLSAYLRQEGYEVVEAADGLEALGKIPQAS--LVVLDLMLPRLSGWE  60
            R+LLV+DD  I + + A+L + GY+V   +DG EA  K+ + +  LV+LD+MLP ++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VARELRRDYPELPVLMLTAKGEEEERIRGLDLGADDYVTKPFSPREvvarvrallrrSG-  119
            + RE+R    + P+LM+TA +++E++IR++D  ADDYVTKPF  + ++ RV ALLRRSG 
Sbjct  64   LLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  120  LKAELAFGELVIRPREREAYLAGEPLALSKLEFDLLLTLAQHPRLVWSRERLLERVWGTD  179
            L  E+  G L + P +      G  L+L++ EF++LL L Q+     ++E +L R+WG D
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FPGVDRVVDVHIAGLRKKLGEDGDNPRYIETVRGVGYRFQE  220
            F G +  V+ HI  LR KL E+      I T+RGVGYR++E
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

302) BN6_45450 in NC_019673


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 149/224 (67%), Gaps = 7/224 (3%)

Query  1    MDYSVLLVEDDEHIRQALGLALGDEGFAVSDAVSGEDALRVLDHGSYDVVLLDLMLPGVD  60
            M   +LLVEDD+HI +++   L++ G+ V     G++A   + + +Y++V+LD+MLPG++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLEVCRTLRARGDLPIIIVTARADTADVIAGLEAGADDYVTKPLAADVlaarirallrrr  120
            G E+ R +RA+ D PI+++TA +D  + I +++A ADDYVTKP+  ++L  R+ ALLRR 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  gggrQDEVLRFGGLEVRPDVGTVHRAGVEVHLTRTEFRLLVELGSAAGRIVTREQLLQRV  180
            G+  ++  +R G L + P+  TV   G E+ LTR EF +L+ L    GR +T+E +L R+
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYFGDTRLLDVHIRRLRRKVEPDPDDPTLVLTVRGSGYRID  224
            WGYD+ GD   ++ HI+ LR K+   P++  ++ T+RG GYR++
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL---PEN--IIKTIRGVGYRLE  217

303) AXY_06550 in NC_018704


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 90/218 (42%), Positives = 143/218 (66%), Gaps = 4/218 (1%)

Query  4    ILVVDDDDHIRQLIALYLKNHHFEVVEARNGYEAIEKLEQNPIDLAIVDIMMPKMDGIEL  63
            IL+V+DDDHI + +  +L +  ++V    +G EA  K+ +N  +L I+DIM+P M+G EL
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   TKEIRQYYSIPILMVTAKGASEDKVSGFEAGTDDYLVKPFDPIELVLRVKALLKRYNINV  123
             +E+R     PILM+TA +  E+++ +F+A +DDY+ KPF    L+ RV ALL+R +  +
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-SGAL  123

Query  124  ERNNRIGTIEIDLDRLIVSDGETTVelkrkecelllelSFEPGRIFTRAQLVEKIWGFDY  183
             ++ R+G + +  + + V  + T + L RKE E+LL L  + GR +T+  ++ +IWG+D+
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  184  EGDERTVDVHIKRLREKLAPFKELKITTVRGLGYRLED  221
            EGD  TV+ HIK LR KL+   E  I T+RG+GYRLE+
Sbjct  184  EGDGSTVHTHIKNLRAKLP---ENIIKTIRGVGYRLEE  218

304) CPF_2180 in NC_008261


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 147/221 (67%), Gaps = 4/221 (1%)

Query  1    MNKTVLIVEDEIRIRFLVRDYFKKEGFNVLEASDGEEALRIFSENIVDLAILDIMMPKLD  60
            M+  +L+VED+ +I   VR ++   G++V   +DG+EA   F EN  +L ILDIM+P ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GLAVCRNIREVSNTPIILLTAKSQEEDKLLGYELGADDYMTKPFSPkvllakakallRRT  120
            G  + R++R  ++TPI+++TA S++E+++ +++  ADDY+TKPF  ++LL +  ALLRR+
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GTLNDKNILDFNGLTINKLSHEVKLNGEELLLSPKEYDLLIYLSSNEGIALSRDRILDNV  180
            G+L     +    LT+      V  +G EL L+ KE+++L+ L  N G +L+++ IL  +
Sbjct  121  GALAKE--IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDYFGDIRTVDTNIKRLREKLLDKANYIATVRGSGYKFE  221
            WGYD+ GD  TV+T+IK LR KL +  N I T+RG GY++E
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLE  217

305) UWK_01389 in NC_020304


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 151/224 (68%), Gaps = 7/224 (3%)

Query  1    MRILIVDDEENLVEQIRLALTQQKYTVDTAFDGEEALEKIYVEPYDLILLDIMLPKRDGF  60
            +RIL+V+D++++ + +R  L++  Y VD+  DG+EA  K+Y + Y+L++LDIMLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   GVLFELRDEKNSTPVLMLTAKGAIEDKIKGLDMGADDYLAKPFSmeellarmrallrrSN  120
             +L E+R  KN TP+LM+TA +  E++I+++D  ADDY++KPF M+ LL R+ ALLRRS 
Sbjct  63   ELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  ELVSPVLEVNTITLDPAKREVHKDGQLIELTLKEFSILEFLMYNINRAISRVSIAEHVWG  180
             L   +  V  +TL P    V  DG  + LT KEF IL +L+ N  R++++  I  ++WG
Sbjct  122  ALAKEI-RVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  DEFDPWTMSNSIDVHIKNLRKKIDDSKGQIIRTVRGVGYIIKDD  224
             +F+    +++++ HIKNLR K+ ++   II+T+RGVGY + + 
Sbjct  181  YDFE--GDGSTVHTHIKNLRAKLPEN---IIKTIRGVGYRLEES  219

306) Sulac_0734 in NC_016884


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 148/221 (67%), Gaps = 8/221 (3%)

Query  3    RILVVDDEPAILELVSYNLVREGFEVISEQDGEMGLTRAMNESFDLVVLDVMLPGRSGLD  62
            RIL+V+D+  I + V   L   G++V +  DG+ + T+  +++++LV+LD+MLPG +G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRAIRQTKDIPIIMLTARKDEVDRVLGLELGADDYVTKPFSPRELVARVKAILRRSAKG  122
            + R +R  +D PI+M+TA  D+ +++ +++  ADDYVTKPF  + L+ RV A+LRRS+  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG--  121

Query  123  RDTGDEIRFPGLTINLERRMVTVDGQPVNltftefelltILARHPGRAFSREELLVRVWG  182
               + EIR   LT+  E   V  DG  + LT  EFE+L +L ++ GR++++E +L R+WG
Sbjct  122  -ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  DDFYGDSRTVDVHVRHLREKLKEDPSSPRFIETVRGVGYRF  223
             DF GD+ TV+ H+++LR KL E+     +I T+RGVGYR+
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRL  216

307) vicR in NC_015757


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  124 bits (452),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 148/221 (67%), Gaps = 8/221 (3%)

Query  3    RILVVDDEPAILELVSYNLVREGFEVISEQDGEMGLTRAMNESFDLVVLDVMLPGRSGLD  62
            RIL+V+D+  I + V   L   G++V +  DG+ + T+  +++++LV+LD+MLPG +G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VCRAIRQTKDIPIIMLTARKDEVDRVLGLELGADDYVTKPFSPRELVARVKAILRRSAKG  122
            + R +R  +D PI+M+TA  D+ +++ +++  ADDYVTKPF  + L+ RV A+LRRS+  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG--  121

Query  123  RDTGDEIRFPGLTINLERRMVTVDGQPVNltftefelltILARHPGRAFSREELLVRVWG  182
               + EIR   LT+  E   V  DG  + LT  EFE+L +L ++ GR++++E +L R+WG
Sbjct  122  -ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  183  DDFYGDSRTVDVHVRHLREKLKEDPSSPRFIETVRGVGYRF  223
             DF GD+ TV+ H+++LR KL E+     +I T+RGVGYR+
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRL  216

308) Cphy_2827 in NC_010001


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 73/179 (41%), Positives = 122/179 (69%), Gaps = 8/179 (4%)

Query  52   ELILLDVMLPNEDGLSILSNVRKDSKTENIPIMMVTAKTTEMDKVKGLDLGADDYITKPF  111
            +L++LD+MLP  +G  +L + R  + T   PI+M+TA + + ++++++D  ADDY+TKPF
Sbjct  48   QLVILDIMLPGMNGHELLREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  112  GIMELVSRVKALLRRAGGNGQNVGALSFHDVSLHVEKHSVTVDGESCELTYKEFELLRYL  171
             +  L+ RV ALLRR+G+ ++++       ++L  E  +V  DG    LT KEFE+L  L
Sbjct  105  KMQILLKRVEALLRRSGALAKEIRV---GRLTLLPEDFTVLCDGTELPLTRKEFEILLLL  161

Query  172  LENQGIVLSRDRIMERVWGFDYEGESRTVDMHIKTLRHKLGAGGDIIKTVRNVGYKIGD  230
            ++N+G  L+++ I+ R+WG+D+EG++ TV+ HIK LR KL    +IIKT+R VGY++ +
Sbjct  162  VQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

309) Krad_3815 in NC_009664


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 145/221 (66%), Gaps = 6/221 (2%)

Query  1    MRGRVLVVDDDTALAEMLGIVLQGEGLETRFCADGDQAVGAFRATRPDLVLLDLMLPGTD  60
            M  R+L+V+DD  + + +   L   G +   C+DG++A   F     +LV+LD+MLPG +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCRQIRAESGVPIVMLTAKSDTVDVVLGLEAGADDYVVKPFKPKElvarvrarlrSA  120
            G E+ R++RA ++ PI+M+TA SD  + + +++A ADDYV KPFK + L+ RV A LR +
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GERPPETLRIGDLTIDVAGHSVRRDGRSLPLTPLEFELLVTLARKPWQAFTRELLLEQVW  180
            G  + E +R+G LT+   + +V  DG  LPLT  EFE+L+ L ++  +++T+E++L ++W
Sbjct  121  GALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  181  GYRHAADTRLVNVHVQRLRSKIERDPEHPEIVVTVRGVGYR  221
            GY   +D   V+ H++ LR+K+   PE+  I+ T+RGVGYR
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKL---PEN--IIKTIRGVGYR  215

310) Mesil_2802 in NC_014212


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  123 bits (451),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 133/219 (61%), Gaps = 6/219 (2%)

Query  1    MPAKVLVVEDDPGIRMLVATTLQSAGLAVLEARDGVEA-MDFIPEA-DLVVLDVGLPRQS  58
            M+ ++L+VEDD  I   V + L  AG  V    DG EA   F  ++ +LV+LD+ LP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  59   GWEVLEAIRQNFGQLPVLMLTGHSDETNRVRGLESGADDYLTKPFSVRELAARVKALLRR  118
            G E+L  +R +  + P+LM+T+ SD+ N++R++++ ADDY+TKPF ++ L  RV ALLRR
Sbjct  61   GHELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  119  SGRLGLIV-MGSLKLSPGSREAWLDNDTLHLTPLEFDLLMTLAQAPGRIFSREELLVRHW  177
            SG L+  + +G L L P       D   L LT  EF++L+ L Q  GR +++E +L R W
Sbjct  120  SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  178  GAEYEGTERVVDIYIGRLRKKLLTESDRLETVWGQGYRL  216
            G ++EG    V+  I  LR KL    + + T++G GYRL
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRL  216

311) Slip_0815 in NC_014220


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 95/232 (41%), Positives = 145/232 (63%), Gaps = 15/232 (6%)

Query  3    NARILVVDDEVHIVELVKFNLEKEGFQVRVAYDGITALTQAELVRPDLIILDIMLPQLDG  62
            + RIL+V+D+ HI + V+  L   G+QV    DG  A T+      +L+ILDIMLP ++G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  63   LEVCRRLRSMQDFSSTPIIMLTAKGEEFDTVLGLEMGADDYIKKPFSPREMvarvkarlr  122
             E+ R +R+ +D   TPI+M+TA +++ + + +++  ADDY+ KPF  + ++ RV A LR
Sbjct  62   HELLREFRAKND---TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLR  118

Query  123  akrILEAEKATGRKTLVFKDLIVIPDKHEAFVGERRLELTPKEFELLKLLASNQGKVFSR  182
                L  E   GR TL+  D+ V+ D  E       L LT KEFE+L LL  N+G+ +++
Sbjct  119  RSGALAKEIRVGRLTLLPEDFTVLCDGTE-------LPLTRKEFEILLLLVQNKGRTLTH  171

Query  183  EVLLEKVWGYEFSGDTRTVDVHIRHLRQKLGESPSSPQYIETVRGVGYRFKE  234
            E++L ++WGY+F GD  TV+ HI++LR KL E+      I T+RGVGYR+ E
Sbjct  172  EIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLEE  218

312) Desde_1577 in NC_018017


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 88/214 (42%), Positives = 142/214 (67%), Gaps = 4/214 (1%)

Query  4    ILIVEDEEAINELVKRNLQLVGHHCASVFDGITAVSEIQCQSYDLIILDIMLPGLDGFEV  63
            IL+VED++ I + V+  L   G +  +  DG  A + +  ++Y+L+ILDIMLPG++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   IKH---AKNTPTIFLTAKDSLPDRLKGLSMGADDYLTKPFEMLELLARVEAVLRRTQKAA  120
            +++    ++TP + +TA     ++++++   ADDY+TKPF M  LL RVEA+LRR+   A
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  121  SCFEAGRVRIDFDSRQVFHDGQLVECTPKEYELLEVLVNNRNIALSRERLLELVWGYDFE  180
              +  GR+ +  +   V+ DG  +  T KE+E+L +LV+N+  +L++E +L  +WGYDFE
Sbjct  125  KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFE  184

Query  181  GDTRTVDVHIQKLRKKLGWEERIKTVYKLGYRLE  214
            GD  TV+ HI++LR KL  E+ IKT+  +GYRLE
Sbjct  185  GDGSTVHTHIKNLRAKLP-ENIIKTIRGVGYRLE  217

313) Tter_1435 in NC_013525


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 92/220 (42%), Positives = 142/220 (65%), Gaps = 7/220 (3%)

Query  7    RILVIEDEHQIADLLRRGLTFKGYLVDTAASGEEGLDKARDNPPDLVILDLMLPEMSGEE  66
            RIL++ED+++I + +R  L+  GY VD+ + G+E+  K  +N  +LVILD+MLP M+G+E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  67   VCRRLREGLDPDLPIIILTAKDATEDKIAGLDAGADDYITKPFNFEEllariraslrrrQ  126
            + R +R     D PI+++TA    E++I ++DA ADDY+TKPF+ + LL R+ A LRR  
Sbjct  64   LLREFRA--KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  127  PQEKSIIRVGDLTLNLASREAMRGERKLDLTTREFDLLEFLARNEGHVVSKEAIFERVWG  186
            +  K I RVG LTL       + +   L LT +EF++L +L +N G+ ++ E I+ R+WG
Sbjct  122  ALAKEI-RVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  187  YSFDIDSDAVKVYISYLRSKLTAGGEPDMIHTIRGIGYML  226
            Y F+ D+ +V   I  LR+KL      ++I TIRG+GY L
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGYRL  216

314) Csac_2034 in NC_009437


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 153/227 (68%), Gaps = 12/227 (5%)

Query  4    ILIVDDEPHIVELIKFNLQKEGYNTFEAENGNTALDIIKNNKIDLVILDIMMSDKDGYEV  63
            IL+V+D+ HI + ++  L   GY+     +GN A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNKGTRNLPVILLSAKSEEIDRILGLELGADDYITKPFSVKELVARVKALFRRIE  123
            L+E+R +++T   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV AL+RR  
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  124  NLKPEVEEKIRFGDIEVDFTKRSVKKRNQEIslsfkefellkllIENRGRVLDRDFILQR  183
             L  E+    R+  +  DFT   V     E++L+ KEFE+L LL++N+GR L +++IL R
Sbjct  122  ALAKEIRVG-RLTLLPEDFT---VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  184  VWGYEFDGDSRTVDVHIRFLRRKLEDDEKNPKYIETVRGVGYRFREG  230
            +WGY+F+GD+ TV+ HI+ LR KL ++      I T+RGVGYR+ E+
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

315) Namu_4670 in NC_013235


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  122 bits (445),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 138/220 (63%), Gaps = 7/220 (3%)

Query  5    GVRILVVEDDDLLRAVIAESLRDAGHLVEvsadgmaaaavadsFRPDLAVLDVMLPHWSG  64
            ++RIL+VEDDD +   +   L +AG  V+  +DG  A +       +L +LD+MLP  +G
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  65   LELARALRGGTDVPVIFVTALDGVDDRLAGFDAGADDYLVKPFAVAELLARVSAVLRRSG  124
             EL R +R+  D P++ +TAL + ++++ +FDA ADDY+ KPF +  LL RV A+LRRSG
Sbjct  62   HELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  125  RLSAQLIEVGDLIVDDDAGVVQRAGQEIDLTATERRLLLYLARHRGRVLSKTQILTQVWG  184
             L+ + I VG L +  +   V   G E+ LT  E  +LL L +++GR L+   IL+++WG
Sbjct  122  ALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  185  YDAYDPN--LVEAFISGLRRKLDQHGPRLIHTVRGVGYRL  222
            YD ++ +   V++ I  LR KL ++   +I T+RGVGYRL
Sbjct  181  YD-FEGDGSTVHTHIKNLRAKLPEN---IIKTIRGVGYRL  216

316) CYB_2856 in NC_007776


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  121 bits (443),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 143/223 (65%), Gaps = 13/223 (5%)

Query  24   LLVVDDEDAIRETVALALEEQGYQVLQAADGRQALEMVHTVERLDLMILDLMLPSLNGLD  83
            +L+V+D+D I +TV   L E GYQV   +DG +A       +  +L+ILD+MLP++NG +
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYE-NTYQLVILDIMLPGMNGHE  63

Query  84   LCRLLRREGNTIPILMLTAKSSETDRVVGLELGADDYLTKPFGMRELIARCRSVLRRQQL  143
            L R +R   +T PILM+TA S + +++ +++  ADDY+TKPF M+ L+ R  ++LRR   
Sbjct  64   LLREFRAKNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--  120

Query  144  AQASDATVLRYGDLCMFTQECRVLVRGVEVSFSPKEFRLLELFMSNPRRVWTREQLLERI  203
              ++ A  +R G L ++ ++  VL  G E++++ KEF +L L++ N  R  T+E +L RI
Sbjct  121  --GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  204  WGSDFMGDSKTVDVHIRWLREKLELDPSNPEYLV-TVRGFGYR  245
            WG DF GD+ TV+ HI+ LR KL      PE ++ T+RG GYR
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL------PENIIKTIRGVGYR  215

317) ROP_pROB01-01890 in NC_012520


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 143/220 (65%), Gaps = 6/220 (2%)

Query  1    MRILLVEDEARLAETVRRGLTAEGFVVDVAREGCDGLEQAVTGDFDVVVLDIMLPGMHGY  60
            +RILLVED+ ++ +TVR  L+  G+ VD   +G ++  +     +++V+LDIMLPGM+G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   QILRELRARQVWTPVLMLSAKDGEYDQADAFDLGADDYLTKPFSFVIlvarlrallrrga  120
            ++LRE+RA++  TP+LM++A  ++ +Q  AFD  ADDY+TKPF   IL+ R+ ALLRR++
Sbjct  63   ELLREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  perpaILTAGNLALDPARRRVSRGEDVLALTPREYGVLEFLLRNKGDVVSKAEILRSVWD  180
            +    I   G L+L P    V  +   L+LT +E+ +L +L++NKG  ++   IL  +W+
Sbjct  122  ALAKEI-RVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  SNYDGDDNVVEVYIGYLRRKIDAPFGMATIETVRGVGYRL  220
             +++GD++ V+  I  LR K+        I T+RGVGYRL
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPE----NIIKTIRGVGYRL  216

318) RTO_22740 in NC_021015


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 91/218 (42%), Positives = 143/218 (66%), Gaps = 7/218 (3%)

Query  5    VEDDDNIRELVIYTLETTGLEARGFADGTAFMEALAFDTPELVLLDIMLPGEDGLEILKK  64
            VEDDD+I + V   L  +G +  + +DG      +  +T +LV+LDIMLPG +G E+L+ 
Sbjct  8    VEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHELLRE  67

Query  65   LKNSSKTKDIPVIMVTAKGSEYDKVVGLDSGADDYVTKPFGMMELISRIKAVLRRSGKQQ  124
            ++  +   D P++M+TA + + +++ ++D+ ADDYVTKPF M  L+ R+ A+LRRSG   
Sbjct  68   FRAKN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  125  DKTKLSVGGISLDTKKHEVKVDGEQVVltlkefelleklMRNQGIVLTRDQLLTEIWGYD  184
               +  VG ++L      V  DG ++ LT KEFE+L  L++N+G  LT++ +L+ IWGYD
Sbjct  125  KEIR--VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  185  FDGETRTVDVHIRTLRQKLGEQGSLVKTVRGVGYRIGG  222
            F+G+  TV+ HI+ LR KL E  +++KT+RGVGYR+  
Sbjct  183  FEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

319) BTG_24745 in NC_018500


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 150/228 (66%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KASKKPLENEDDTLSIHGIQVHFPSRTVTVDEADVSLTHTEFEILVYFMKNQGIVLTREQ  180
            +++  + E   + L++  +  +F   TV  D ++++LT+ EFEIL+ +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

320) HD73_5124 in NC_020238


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 150/228 (66%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KASKKPLENEDDTLSIHGIHVHFPSRTVTVDEADVSLTHTEFEILVYFMKNQGIVLTREQ  180
            +++  + E   + L++  +  +F   TV  D ++++LT+ EFEIL+ +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

321) BMB171_C4446 in NC_014171


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 150/228 (66%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KASKKPLENEDDTLSIHGIHVHFPSRTVTVDEADVSLTHTEFEILVYFMKNQGIVLTREQ  180
            +++  + E   + L++  +  +F   TV  D ++++LT+ EFEIL+ +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

322) Desku_2766 in NC_015573


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 133/222 (60%), Gaps = 9/222 (4%)

Query  3    RILLVDDEISIKRVVEQTLEREGFTVDYAADGLAARELFTRRQPDLVILDVMLPEIDGFE  62
            RILLV+D+  I   V   L   G+ VD  +DG  A   F     +LVILD+MLP ++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRRWREVSDVPILILSAKGDIVDKSVGFNCGADDYLTKPFSPVELALRVKALLRRSRQG  122
            L R  R  +D PIL+++A +D  ++  +F+  ADDY+TKPF    L  RV ALLRRS  G
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS--G  121

Query  123  RMDRSDRVEAAGLQIDAFQRRVWVEGREVELTPKEFDLLWFLARHPGRVFTREQIFAHVW  182
             + +  RV    L  + F   V  +G E+ LT KEF++L +L ++ GR +T+E I++++W
Sbjct  122  ALAKEIRVGRLTLLPEDFT--VLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  183  GDDVLSDLSTVTVFMRRLREKIEADPRKPRYLKTIWGVGYKF  224
            G D  +D STV   ++ LR K+  +      +KTI+GVGY++
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRL  216

323) MC28_4098 in NC_018693


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 149/228 (66%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KASKKPLENEDDTLSIHGIHVHFPSRTVTVDEVDVSLTHTEFEILVYFMKNQGIVLTREQ  180
            +++  + E   + L++  +  +F   TV  D  +++LT+ EFEIL+ +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

324) Athe_0280 in NC_012034


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 93/222 (42%), Positives = 139/222 (63%), Gaps = 6/222 (2%)

Query  1    MRILVIEDQKSLANTIARRLQEVGYSVDMALDGQEGLNFIQTASYDLIILDIMLPKIDGI  60
            +RIL++ED+  + NT+   L E GY VD   DG+E+   +   +Y+L+ILDIMLP ++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   TLLKLVRNKGVQTPVLCLTAKDSIEDRVTGLDAGADDYLVKPFSFDEllarvrallrrYS  120
             LL+  R K  +TP+L +TA    E+++ ++DA ADDY+ KPF  + LL RV ALLRR +
Sbjct  63   ELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  QIKDPIIQIKDLVIDTNSRKVTRAGKVIDLTSKEYSVLEYLARNKGRVLTRSQIAEHVWN  180
             +   I ++  L +  +   V   G  + LT KE+ +L  L +NKGR LT+  I  ++W 
Sbjct  122  ALAKEI-RVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  YDFEGTSNIVDVYIRYLRRKIDDGFPEKLIHTIRGVGYMLRD  222
            YDFEG ++ V+  I+ LR K+    PE++I TIRGVGY L +
Sbjct  181  YDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

325) Cphy_1676 in NC_010001


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  117 bits (427),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 87/216 (41%), Positives = 142/216 (66%), Gaps = 2/216 (0%)

Query  2    LNILIVEDEQAINELIYLNLSDEGYRCTRAYDGEEAANLIENYNYDLILLDIMLPKINGY  61
            + IL+VED++ I + +   L++ GY+     DG+EA   + +  Y+L++LDIMLP +NG 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  62   ELF-DYIHPLGTPVIFITAKSDINDRIRGLRLGADDYISKPFQVGELLARVEAVIRRFGK  120
            EL+ ++    +TP++ +TA SD +++IR++   ADDY++KPF++  LL RVEA++RR G 
Sbjct  63   ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  121  SERKIELYGVTIDLNSREVRKDGQLIELTVKEFELLIQLIQNKNVALRRSWLYERVWEGE  180
              + I +  +T+  +   V  DG  + LT KEFE+L+ L+QNK  +L +  +  R+W  +
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  181  FTGETRTLDTHIQRLRKKLEWEDRIKTVFRIGYRLE  216
            F G+  T++THI+ LR KL  E+ IKT+  +GYRLE
Sbjct  183  FEGDGSTVHTHIKNLRAKLP-ENIIKTIRGVGYRLE  217

326) SYO3AOP1_1480 in NC_010730


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  117 bits (427),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 148/220 (68%), Gaps = 6/220 (2%)

Query  1    MKILLVEDNLDLNNTIREVLELNGYVVDSAFDGKEALNFIENSSYDVIILDLMLPDIDGL  60
            ++ILLVED+ ++ NT+R  L   GY VD+  DG+EA   + +++Y+++ILD+MLP+++G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   EVLKTIRNKGIDTPVIILTAKNQTKDKITGLDLGADDYITKPFDVDELLARIRAIGRRVS  120
            E+L+ +R K  DTP++++TA ++  ++I ++D  ADDY+TKPF ++ LL R+ A+ RR +
Sbjct  63   ELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  AEKKDIVLIDNLEIDLKNKVVKKSGKFVELTPKLYCILEQLVRNRGKIVSYETLLSKCWE  180
            A  K+I  ++ L +   +  V   G  + LT K + IL  LV+N+G+ ++ E +LS+ W 
Sbjct  122  ALAKEIR-VGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  181  ITEVPSRETMRANIKNLR-KLIDPDKKIIKTIEGVGYRIE  219
                    T++++IKNLR KL +   +IIKTI GVGYR+E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPE---NIIKTIRGVGYRLE  217

327) AM1_4053 in NC_009925


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  117 bits (427),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 96/232 (42%), Positives = 148/232 (64%), Gaps = 16/232 (6%)

Query  1    MKTRILVIDDDPAIAELVAINLEMAGYDVAQATDGIKGQALAVQllpdliildlmlpKVD  60
            M  RIL+++DD  I + V   L  AGY+V   TDG  + +   +   +L+ILD+MLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GFTICQRLRRDQRT-ADIPILMLTALSQTQDKVEGFNAGADDYLTKPFELEEMLARVRAL  119
            G    + L R+ R+  D PILM+TALS+ ++++ +F+A ADDY+TKPF ++ +L RV AL
Sbjct  61   G----HELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEAL  116

Query  120  LRRTDRIPQAARHSEILSYGPLTLVPERFEVLWVDKVIKLTRLEFELLHCLLQRHGQTVS  179
            LRR++ +++  R       G LTL+PE F VL  +  + LTR EFE+L  L+Q  G+T++
Sbjct  117  LRRSGALAKEIRV------GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  PSEILQEVWGYDPNDDIETIRVHVRHLRTKLEPDPRHPQYIKTVYGAGYCLE  231
               IL  +WGYD ++D  T++ H+++LR+KL  +      IKT+ G GY LE
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLE  217

328) Dtur_0537 in NC_011661


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  116 bits (424),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 96/226 (43%), Positives = 151/226 (67%), Gaps = 12/226 (5%)

Query  1    MKILIIEDEKKLGTALKKGLEKEGYVVDLAFDGEEAKYIIENNF--EGYDLVILDIMLPK  58
            ++IL++ED+  +  +++  L   GY VD   DG+EA Y    +F  + Y+LVILDIMLP 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEA-Y---TKFYENTYQLVILDIMLPG  58

Query  59   IDGISLCKDLRAKNFQAPILMLTAKDKVEDKILGLESGADDYLVKPFSYEEllarirall  118
            ++G  L +++RAKN ++PILM+TA    E++I ++++ ADDY+ KPF  + LL R+ ALL
Sbjct  59   MNGHELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL  117

Query  119  rrPKNLMPTVLKVKDISLDTVSKRVFRGDIEILLTNKEFAILEYLMRNVNRIISKEQIIS  178
            RR+  L +  ++V  ++L      V+ ++ E+ LT KEF IL  L++N  R ++ E I+S
Sbjct  118  RRSGAL-AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  179  HVWGYESDTLSNVVEAHIKNLRKKLERKRDENIIETIRGMGYRIKE  224
            ++WGY+ +  ++ V++HIKNLR KL     ENII TIRG+GYR+ E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLP----ENIIKTIRGVGYRLEE  218

329) BCE_4969 in NC_003909


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 146/228 (65%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYIVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVMVDKTDINLTHTEFEILAYFMKNQGIVLTREQ  180
            +      E   + L++  +  +F   TV+ D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

330) YBT020_23760 in NC_017200


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

331) BCK_11070 in NC_018491


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 94/228 (42%), Positives = 144/228 (64%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQFLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYFMRNQGIVLTREQ  180
            +     L +E     +  +  +F   TV  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGA--LAKEIRVGRLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGS  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E S
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

332) BCAH187_A4952 in NC_011658


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeevvdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KITKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

333) BCN_4728 in NC_016771


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeevvdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KITKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

334) BCQ_4626 in NC_011969


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  115 bits (421),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeevvdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KITKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYLMKNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  L++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

335) BT9727_4546 in NC_005957


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  115 bits (418),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 144/228 (64%), Gaps = 9/228 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQLLENEDDILSIHGIHVHFPSRTVTVDKTDINLTHTEFEILAYFMKNPGIVLTREQ  180
            +     L +E  +  +  +  +F   TV  D T++ LT+ EFEIL  +++N G  LT+E 
Sbjct  119  RSGA--LAKEIRVGRLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

336) COB47_0270 in NC_014392


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 142/224 (64%), Gaps = 10/224 (4%)

Query  1    MRILIVEDQESLAHTIARRLQEVGYSTDITFDGQEGLHFAT--STSYDLIILDIMLPKID  58
            +RIL+VED++ + +T+   L E GY  D   DG+E+  ++     +Y+L+ILDIMLP ++
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEA--YTKFYENTYQLVILDIMLPGMN  60

Query  59   GINLLKLIRLKGIQTPVLCLTAKDSIEDRVIGLDAGADDYLVKPFSFDEllarirallrr  118
            G +LL+ +R K  +TP+L +TA    E+++ ++DA ADDY+ KPF  + LL R+ ALLRR
Sbjct  61   GHELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  119  YAQTREPIIKVKDLVIDTNSHKVTRAGKLIELTSKEYSILEYLARNKGRVLTRSQIAEHV  178
             + +    I+V  L +  +   V   G  + LT KE+ IL  L +NKGR LT+  I  ++
Sbjct  120  -SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  179  WNYDFEGTSNIVDVYIRYLRRKIDDGFPEKLIYTIRGVGYMLRD  222
            W YDFEG ++ V+  I+ LR K+    PE++I TIRGVGY L +
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

337) BC4810 in NC_004722


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMKNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

338) BCB4264_A4937 in NC_011725


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMKNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

339) BCZK4564 in NC_006274


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 144/228 (64%), Gaps = 9/228 (3%)

Query  1    MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            MS  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKRLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMRNQGIVLTREQ  180
            +     L +E     +  +  +F   TV  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGA--LAKEIRVGRLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

340) CYA_1033 in NC_007775


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 87/212 (42%), Positives = 134/212 (64%), Gaps = 13/212 (6%)

Query  37   ETVAVALEEQGYQVLQAADGRQALELVHTAERLDLMILDLMLPGLNGLDLCRLLRREGNT  96
            +TV   L E GYQV   +DG +A       +  +L+ILD+MLPG+NG +L R +R   +T
Sbjct  16   NTVRAFLAEAGYQVDACTDGNEAYTKFY-ENTYQLVILDIMLPGMNGHELLREFRAKNDT  74

Query  97   IPILMLTAKSSETDRVVGLELGADDYLTKPFGMRELIARCRSVLRRRQQSHASEATVLRY  156
             PILM+TA S + +++ +++  ADDY+TKPF M+ L+ R  ++LRR     ++ A  +R 
Sbjct  75   -PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS----GALAKEIRV  129

Query  157  GDICMFTQECRVLVRGVEVSFSPKEFRLLELFMSNPRRVWTREQLLERIWGSDFMGDSKT  216
            G + ++ ++  VL  G E++++ KEF +L L++ N  R  T+E +L RIWG DF GD+ T
Sbjct  130  GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFEGDGST  189

Query  217  VDVHIRWLREKLELDPSNPEYLV-TVRGFGYR  247
            V+ HI+ LR KL      PE ++ T+RG GYR
Sbjct  190  VHTHIKNLRAKL------PENIIKTIRGVGYR  215

341) BCA_4953 in NC_012472


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMRNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

342) BALH_4385 in NC_008600


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 145/228 (64%), Gaps = 9/228 (3%)

Query  1    MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEAlvvfeeeevdlvildiMLPELD  60
            M+  IL+VED+D + + ++ ++    Y V    DG+EA   F E+  +LVILDIMLP ++
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR  120
            G  + R +R  ++ PI+M+TA  D+++ + +F+  ADDYVTKP+   ILL R   LL  R
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALL--R  118

Query  121  KVTKQLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMRNQGIVLTREQ  180
            +      E   + L++  +  +F   TV  D T++ LT+ EFEIL  +++N+G  LT+E 
Sbjct  119  RSGALAKEIRVGRLTL--LPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  181  LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGN  228
            ++SRIWGY+F GD+ TV++HI+NLR KL E+   I T+   GY++E +
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI--IKTIRGVGYRLEES  219

343) Cyagr_1052 in NC_019675


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  113 bits (411),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 95/231 (42%), Positives = 152/231 (66%), Gaps = 15/231 (6%)

Query  17   MHPPLLVVEDDDTIRETIRDVLVLEGFSVTACGNGTEALRTLQECPPGEEFSlvvldlml  76
            M   +L+VEDDD I +T+R  L   G+ V AC +G EA   + E    + + LV+LD+ML
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYE----NTYQLVILDIML  56

Query  77   pglggldlCRQLRSAGNQTPILVVSARDSETDRVLGLEVGADDYLIKPFGLRELVARCRA  136
            PG+ G +L R++R A N+TPIL+++A   + +++ +++  ADDY+ KPF ++ L+ R  A
Sbjct  57   PGMNGHELLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEA  115

Query  137  LMRRSRSVEVAAKVLQHANLSLYPEECRVTRDGLEVNLSPKEYRLLELFMQNPRRVWSRD  196
            L+RRS ++   AK ++ + L+L PE+  V  DG E+ L+ KE+ +L L++QN  R  +++
Sbjct  116  LLRRSGAL---AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHE  172

Query  197  KLLERVWGYDYFGDSKTVDVHIRWLREKLEANPSAPEHLI-TVRGFGYRFG  246
             +L R+WGYD+ GD+ TV+ HI+ LR KL      PE++I T+RG GYR+ 
Sbjct  173  IILSRIWGYDFEGDGSTVHTHIKNLRAKL------PENIIKTIRGVGYRLE  217

344) ELI_1637 in NC_014624


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  113 bits (411),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 149/226 (66%), Gaps = 10/226 (4%)

Query  3    KILIIEDELNIFELIKFNLEAQGFEVAGVHEGTGAVEKIVDIRPDLIILDLMLPGKDGLT  62
            +IL++ED+ +I + ++  L   G++V +  +G  A  K+ +   +L+ILD+MLPG +G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   ICREVRADKNLSYIPVIMLTAKSEEFDKVLGLEMGADDYMTKPFSVKELYARVKAVLRRT  122
            + RE RA ++    P++M+TA S++ +++ +++  ADDY+TKPF ++ L  RV A+LRR+
Sbjct  64   LLREFRAKND---TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  123  EMIKSSDTEEIAVGSLRILPGSFEVYKNGkklsltlkeyelllylannknkvlTRDQLLD  182
              +    + EI VG L +LP  F V  +G  L+LT KE+E+LL L +NK + LT++ +L 
Sbjct  121  GAL----AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  EIWGYEYYGETRTVDVHIRYLRKKIEDDQEKYIETVRGVGYRLVEN  228
             IWGY++ G+  TV+ HI+ LR K+    E+ I T+RGVGYRL E+
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKL---PENIIKTIRGVGYRLEES  219

345) K649_14865 in NC_021081


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  112 bits (409),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 141/223 (64%), Gaps = 11/223 (4%)

Query  3    KLLLVEDEPSVRLGLRLSLSKAGHQVLEAATAAEAWEKM--PAADLVILDWMlpdepglr  60
            ++LLVED+  +   +R  L+ AG QV   + + EA  K    + +LVILD MLP+  G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   llerlrrdgrYEQLPVLMLTARAGEEDRVEGLTRGADDYLTKPFSTPELIARVQALLRRV  120
            LL  +R     ++ P+LM+TA +++E+++ ++   ADDY+TKPF    L+ RV+ALLRR 
Sbjct  64   LLREFRAK---NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GKSGRLER-GALSLDLERHQAFLDGHSLELTRREFELLAFLARHPGRVYTREELLERVWG  179
            G  ++  R G L+L  E    + DG  L LTR+EFE+L +L ++ GR  T+E +L R+WG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  180  QEFLGTARTVDQHIAQLRDKLSEDPKAPRFLETLRGVGYRFRE  222
             +F G + TV+ HI +LR KL+E+     ++ T+RGVGYR+ E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

346) Mrub_1539 in NC_013946


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  112 bits (409),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 141/223 (64%), Gaps = 11/223 (4%)

Query  3    KLLLVEDEPSVRLGLRLSLSKAGHQVLEAATAAEAWEKM--PAADLVILDWMlpdepglr  60
            ++LLVED+  +   +R  L+ AG QV   + + EA  K    + +LVILD MLP+  G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   llerlrrdgrYEQLPVLMLTARAGEEDRVEGLTRGADDYLTKPFSTPELIARVQALLRRV  120
            LL  +R     ++ P+LM+TA +++E+++ ++   ADDY+TKPF    L+ RV+ALLRR 
Sbjct  64   LLREFRAK---NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  GKSGRLER-GALSLDLERHQAFLDGHSLELTRREFELLAFLARHPGRVYTREELLERVWG  179
            G  ++  R G L+L  E    + DG  L LTR+EFE+L +L ++ GR  T+E +L R+WG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  180  QEFLGTARTVDQHIAQLRDKLSEDPKAPRFLETLRGVGYRFRE  222
             +F G + TV+ HI +LR KL+E+     ++ T+RGVGYR+ E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

347) K649_01130 in NC_021081


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  111 bits (403),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 138/218 (64%), Gaps = 9/218 (4%)

Query  3    RVLLVDDDPAIREVLGVYLRQEGCEVLEATNGLEALQLLPQA--DVVILDLMLPQLTGWQ  60
            R+LLV+DD  I + +  +L + G +V   T+G EA   + +   ++VILD+MLP + G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VAQELRRDYPDLPLLMLTARGEEAERIQGLELGADDYVTKPFSPREvvarvrallrrSG-  119
            + +E+R    D P+LM+TA +++ ++I++++  ADDYVTKPF  + ++ RV ALLRRSG 
Sbjct  64   LLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  120  FKQELVFGDLILRPRQREALFKGQALNLSKLEFDLLLTLAQHPGLVWSRERLLERVWGSD  179
            + +E+  G L L P +   L  G  L L++ EF++LL L Q+ G   ++E +L R+WG D
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FPGVDRVVDVHVAGLRKKLGEDAENPLYIETVRGVGYR  217
            F G +  V+ H+  LR KL E+      I T+RGVGYR
Sbjct  183  FEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYR  215

348) Mrub_0302 in NC_013946


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  111 bits (403),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 88/218 (41%), Positives = 138/218 (64%), Gaps = 9/218 (4%)

Query  3    RVLLVDDDPAIREVLGVYLRQEGCEVLEATNGLEALQLLPQA--DVVILDLMLPQLTGWQ  60
            R+LLV+DD  I + +  +L + G +V   T+G EA   + +   ++VILD+MLP + G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VAQELRRDYPDLPLLMLTARGEEAERIQGLELGADDYVTKPFSPREvvarvrallrrSG-  119
            + +E+R    D P+LM+TA +++ ++I++++  ADDYVTKPF  + ++ RV ALLRRSG 
Sbjct  64   LLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  120  FKQELVFGDLILRPRQREALFKGQALNLSKLEFDLLLTLAQHPGLVWSRERLLERVWGSD  179
            + +E+  G L L P +   L  G  L L++ EF++LL L Q+ G   ++E +L R+WG D
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FPGVDRVVDVHVAGLRKKLGEDAENPLYIETVRGVGYR  217
            F G +  V+ H+  LR KL E+      I T+RGVGYR
Sbjct  183  FEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYR  215

349) Gura_2556 in NC_009483


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  110 bits (401),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 65/160 (41%), Positives = 103/160 (65%), Gaps = 5/160 (3%)

Query  66   LLKKNEKTAAIPIIMLTAKGEEIDRVVGFEVGADDYMVKPFSTRELLLRVKAVLRRTMPE  125
            LL+        PI+M+TA +++ +++ +F+  ADDY+ KPF  + LL RV A+LRR+   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS---  120

Query  126  KTAEKRITIGLVTIDTERHLVNVAGEEIILTTTEFKLLLNLAERLGRVQSRDILLQNVWG  185
             +  K I +G +T+  E   V   G E+ LT  EF +LL L +  GR  +++I+L  +WG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  186  YNYVGDSRTVDTHVTRLRTKLGEAGEMIKTVRGFGYKMEE  225
            Y++ GD+ TV+TH+  LR+KL E  ++IKT+RG GY++EE
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

350) Cha6605_0660 in NC_019697


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  110 bits (399),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 149/229 (66%), Gaps = 16/229 (6%)

Query  3    RILVIDDDAAIAEIVCINLEMAGYEVNQSPDgiqgqamaiqiqPDLIVLDLMLPKVDGYT  62
            RIL+++DD  I + V   L  AGY+V+   DG ++ +   +   +L++LD+MLP ++G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG--  61

Query  63   VCQRLRRDERT-SDIPILMLTALSQTQNKVEGFNAGADDYLTKPFEIEEllarvrallrr  121
              + L R+ R+ +D PILM+TALS+ +N++ +F+A ADDY+TKPF ++ LL RV ALLRR
Sbjct  62   --HELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  122  TDRIPQAAKHSEILNYGELTLVPERFEAIWRGATIKLTHLEFELLHCLLQRHGQTVSPSD  181
            ++ +++  +       G LTL+PE F  +  G+ + LT+ EFE+L  L+Q  G+T++   
Sbjct  120  SGALAKEIRV------GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEI  173

Query  182  ILREVWGYDPDDDIETIRVHIRHLRTKMEPDPRRPKYIKTIYGAGYCLE  230
            IL  +WGYD ++D  T++ HI++LR+K+  +      IKTI G GY LE
Sbjct  174  ILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYRLE  217

351) Mrub_2805 in NC_013946


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  110 bits (399),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  3    RILLIEDDPEIAHLLQLELGEAGYTVDWASGGMSGLVRLREATPdlvildlglpdldggE  62
            RILL+EDD +I + ++  L+EAGY VD  ++G  +  ++ E T +LVILD+ LP+++G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   VARRIRAGYEVPIIVLTAADAVERKVSLLSDGADDYIVKPFHPAELLARIQVQLRHREG-  121
            + R +RA  + PI+++TA    E ++  +   ADDY+ KPF    LL R++  LR+  + 
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  122  GEQISVGGLEVHLAKRQVLFEGQELRLSPKEFELLSLLVSRAGKVFSRQEIEEHLWGRQL  181
            + +I VG L +      VL +G EL L+ KEFE+L LLV   G+ ++++ I  ++WG ++
Sbjct  124  AKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  182  ERDSNVVDVHIANLRAKLREAGAYGYLRTVRGVGYALRQ  220
            E D++ V+ HI NLRAKL E      ++T+RGVGY L +
Sbjct  184  EGDGSTVHTHIKNLRAKLPENI----IKTIRGVGYRLEE  218

352) CCALI_01167 in NC_021487


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  109 bits (398),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 143/222 (65%), Gaps = 7/222 (3%)

Query  1    MNILIVEDDKSVARFLQQALTEAGYTTQVVEDGETALHLAVSIAFDLILLDVMLPRKDGF  60
            + IL+VEDD  +   ++  L+EAGY  +   DG+ A       +++L++LD+MLP  +G 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGH  62

Query  61   ALCKELRAASVTTPILIITARDTLEDKIEGLDSGADDYIVKPCQIGEllarvrallrrGT  120
             L +E+RA +  TPIL++TA    E++I ++D+ ADDY+ KP ++  LL RV ALLRR+ 
Sbjct  63   ELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  121  SSPPVLRVADLTLDPATRKV-CRQGKTIHLSMTEFALLEYLMRNAGRVVTRLMILEHVWQ  179
            + +  +RV+ LTL P    V C +G  + L+  EF +L  L++N GR +T+ +IL ++W 
Sbjct  122  ALAKEIRVGRLTLLPEDFTVLC-DGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  180  YDFEGNDNVLDVYISYLRSKIDRGFARPLIHTVRGVGYRLEG  221
            YDFEG+++ ++  I  LR+K+    +  +I T+RGVGYRLE 
Sbjct  181  YDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

353) EUR_30210 in NC_021010


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 72/179 (41%), Positives = 124/179 (70%), Gaps = 6/179 (3%)

Query  43   HRYDLILLDIMMPGIDGFELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPF  102
            + Y+L++LDIM+PG++G EL + +RA  D PIL +TA +++++ + ++   ADDY++KPF
Sbjct  45   NTYQLVILDIMLPGMNGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  103  GVMELRARINAHLRREHR-EHSVRMVLGRVCIQISQKKLLVDDKELPLTKAEYEICEFLA  161
             +  L  R++A LRR       +R+  GR+ +   +  +L D+ ELPLT+ E+EI  +L 
Sbjct  105  KMQILLKRVEALLRRSGALAKEIRV--GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLV  162

Query  162  KNRGQVFSKEQILEAVFGFDNESNDSTIITHIKNIRAKFADYDYTPIKTVWGIGYKWEE  220
            +N+G+ ++ E IL  + G+D E+++ST+ THIKN+RAK+++     IKT++G+GY+ EE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPE---NIIKTIRGVGYRLEE  218

354) ERE_02700 in NC_021044


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 72/179 (41%), Positives = 124/179 (70%), Gaps = 6/179 (3%)

Query  43   HRYDLILLDIMMPGIDGFELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPF  102
            + Y+L++LDIM+PG++G EL + +RA  D PIL +TA +++++ + ++   ADDY++KPF
Sbjct  45   NTYQLVILDIMLPGMNGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  103  GVMELRARINAHLRREHR-EHSVRMVLGRVCIQISQKKLLVDDKELPLTKAEYEICEFLA  161
             +  L  R++A LRR       +R+  GR+ +   +  +L D+ ELPLT+ E+EI  +L 
Sbjct  105  KMQILLKRVEALLRRSGALAKEIRV--GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLV  162

Query  162  KNRGQVFSKEQILEAVFGFDNESNDSTIITHIKNIRAKFADYDYTPIKTVWGIGYKWEE  220
            +N+G+ ++ E IL  + G+D E+++ST+ THIKN+RAK+++     IKT++G+GY+ EE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPE---NIIKTIRGVGYRLEE  218

355) ROI_06060 in NC_021040


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 72/179 (41%), Positives = 124/179 (70%), Gaps = 6/179 (3%)

Query  43   HRYDLILLDIMMPGIDGFELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPF  102
            + Y+L++LDIM+PG++G EL + +RA  D PIL +TA +++++ + ++   ADDY++KPF
Sbjct  45   NTYQLVILDIMLPGMNGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  103  GVMELRARINAHLRREHR-EHSVRMVLGRVCIQISQKKLLVDDKELPLTKAEYEICEFLA  161
             +  L  R++A LRR       +R+  GR+ +   +  +L D+ ELPLT+ E+EI  +L 
Sbjct  105  KMQILLKRVEALLRRSGALAKEIRV--GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLV  162

Query  162  KNRGQVFSKEQILEEVFGFDSESNDSTIITHIKNIRAKFADYDYTPIKTVWGIGYKWEE  220
            +N+G+ ++ E IL  + G+D E+++ST+ THIKN+RAK+++     IKT++G+GY+ EE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPE---NIIKTIRGVGYRLEE  218

356) Gura_1572 in NC_009483


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 65/160 (41%), Positives = 103/160 (65%), Gaps = 5/160 (3%)

Query  66   LLKKNEKTAAIPIIMLTAKGEEIDRVVGFEVGADDYMVKPFSTRELLLRVKAVLRRTMPE  125
            LL+        PI+M+TA +++ +++ +F+  ADDY+ KPF  + LL RV A+LRR+   
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS---  120

Query  126  KAQGKCITIGLVTIDTERHMVSVAGEEIVLTTTEFKLLLNLAERLGRVQSRDLLLQNVWG  185
             A +K I +G +T+  E   V   G E+ LT  EF +LL L +  GR  +++++L  +WG
Sbjct  121  GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  186  YNYVGDTRTVDTHVTRLRTKLGEAGEMIKTVRGFGYKMEE  225
            Y++ GD  TV+TH+  LR+KL E  ++IKT+RG GY++EE
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

357) Deipr_2674 in NC_015163


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 137/223 (62%), Gaps = 15/223 (6%)

Query  4    ILIVDDDPAILEILRAYLKAEGHTVLEAC----DGYSAREQLPRADLAILDWMLPGVSGV  59
            IL+V+DD  I + +RA+L   G  V +AC    ++Y+   +    +L ILD MLPG++G 
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQV-DACTDGNEAYTKFYE-NTYQLVILDIMLPGMNGH  62

Query  60   DLAREARASGLTLPILMLTARGEEEDKLRGLDFGVDDYVVKPFSPREvvarvrallrrvG  119
            +L RE RA   T PILM+TA +++E+++R++D   DDYV KPF  + ++ RV ALLRR G
Sbjct  63   ELLREFRAKNDT-PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  120  -VQEEIAVGDLRIDLRGHSASLS-GERLELSKLEFDLLSALAQHPGMAWPRERLLERVWG  177
             +  EI VG L + L  + + L  G  L L++ EF++L  L Q+ G +  +E +L R+WG
Sbjct  122  ALAKEIRVGRLTL-LPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG  180

Query  178  SDFPGTERVVDVHITGLRKKLGDTSDTPRFIETVRGVGYRFRE  220
             DF G    V+ HI  LR KL +      +I T+RGVGYR+ E
Sbjct  181  YDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

358) Marky_0243 in NC_015387


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 94/222 (43%), Positives = 145/222 (66%), Gaps = 9/222 (4%)

Query  3    RVLVVDDDPAIREVLAAYLARERFEVLEAEDGLQALEQ--APGADLVILDLMLPGMDGWR  60
            R+L+V+DD  I + + A+LA   ++V    DG +A  +      +LVILD+MLPGM+G  
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VAQELRRDWPDLPILMLTArgeeeervrgfelgADDYVTKPFSPREvvarvrallrrvG-  119
            + +E+R    D PILM+TA +++E+++R+F+  ADDYVTKPF  + ++ RV ALLRR G 
Sbjct  64   LLREFR-AKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  120  LKDELVYGPLVIRPRAREVLLEGQPVALSRLEFDLLLTLARHPGMVFTRERLLERVWGPG  179
            L  E+  G L + P    VL +G  ++L+R EF++LL L ++ G  +T+E +L R+WG +
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FEGVDRVVDVHVALLRKKLGDDAEHPRFIETVRGVGYRFRES  221
            FEG +  V+ H+  LR KL ++     +I T+RGVGYR+ ES
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219

359) EUBELI_01659 in NC_012778


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  106 bits (385),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 72/179 (41%), Positives = 124/179 (70%), Gaps = 6/179 (3%)

Query  43   HRYDLILLDIMMPGMDGFELCKRIRALVDCPILFLTAKTEENSLVNGLSLGADDYISKPF  102
            + Y+L++LDIM+PGM+G EL + +RA  D PIL +TA +++++ + ++   ADDY++KPF
Sbjct  45   NTYQLVILDIMLPGMNGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPF  104

Query  103  GVMELRARINAHLRREHR-EHSVRMVLGRVCIQMSQKKLLMDDKELPFTKAEYEICEFLA  161
             +  L  R++A LRR       +R+  GR+ +   +  +L D+ ELP+T+ E+EI  +L 
Sbjct  105  KMQILLKRVEALLRRSGALAKEIRV--GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLV  162

Query  162  KNRGQVFSKEQILEAVFGFDNESNDSTIITHIKNIRAKFADYDYMPIKTVWGIGYKWEE  220
            +N+G+ ++ E IL  + G+D E+++ST+ THIKN+RAK+++     IKT++G+GY+ EE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPE---NIIKTIRGVGYRLEE  218

360) Desaf_0871 in NC_016629


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 90/222 (41%), Positives = 149/222 (68%), Gaps = 8/222 (3%)

Query  6    ILIVEDDEDILQLIKFNVESAGYDAITASDGLEALNKARRHmpdlilldlmlpgmdgFEV  65
            IL+VEDD++I + ++  +  AGY+  + +DG EA  K   +  +L++LD+MLPGM+G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  66   CKELKRGSETGRIPILMLTARGEEVDRIVGLELGADDYVVKPFSPREIILRVRAVLRRNK  125
             +E++  ++T   PILM+TA +++ ++I +++  ADDYV KPF  + ++ RV A+LRR+ 
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS-  120

Query  126  GEEDVRQSWRRERLSVDMEAHRAEIDDQELLLTATEFKLLSELIRNPGRVLTREQLLNTV  185
                + +  R  RL++  E      D+ EL LT  EF +L  L++N GR LT+E +L+ +
Sbjct  121  --GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  186  WGYEFEGYARTVDTHVRRLRQKLGDYAKFVETVRGVGYRFKE  227
            WGY+FEG + TV+TH++ LR KL +  +++ T+RGVGYR+ E
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPE--NIIKTIRGVGYRLEE  218

361) Moth_1478 in NC_007644


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  105 bits (383),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 92/225 (41%), Positives = 143/225 (64%), Gaps = 8/225 (3%)

Query  14   DMRILVVEDETTLANTLARCLREEGYATDIAYDGEEG-VAFAETVVYDLIILDLMLPRLD  72
             +RIL+VED+  + NT+   L E GY  D   DG+E+   F E   Y+L+ILD+MLP ++
Sbjct  2    SIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENT-YQLVILDIMLPGMN  60

Query  73   GMEVIRRLRNERIETPVLMLTARDTVADKVRGLDAGADDYLTKPFalaellarvrallrr  132
            G E++R +R  + +TP+LM+TA     +++R++DA ADDY+TKPF +  LL RV ALLRR
Sbjct  61   GHELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  133  eSDNKSTVLQVGDLVMDTVSRQVRRGDREINLTNKEYALLEYLMRNPNRVLTRTQIAEHV  192
             S+  +  ++VG L +      V  ++ E+ LT KE+ +L  L++N  R LT+  I  ++
Sbjct  120  -SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  193  WDYDFSGMSNIVDVYIRYLRRKIDDNFEPKLLYTIRGSGYCLREP  237
            W+YDF G ++ V+  I+ LR K+ +N    ++ TIRG GY L E+
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

362) Calkro_1223 in NC_014720


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 155/227 (69%), Gaps = 14/227 (6%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGILALEILKHNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L   GY+      G  A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNKDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R ++DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  124  SLKPEVEDKV-KFGDVEVDFSKRTVKKNNQDVPLSfkefellkllIENRGRVLDRDFILQ  182
            +L  E+  +V ++  +  DF   TV  +  ++PL+ KEFE+L LL++N+GR L +++IL 
Sbjct  122  ALAKEI--RVGRLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  RVWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            R+WGY+F+GD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

363) Theam_1237 in NC_014926


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 91/221 (42%), Positives = 154/221 (70%), Gaps = 17/221 (7%)

Query  1    MKIALVEDDLSILNLLKRVLLSEGFSVREFSTA-EAFMNAVFEYGEEFDLVILDVMLPGT  59
            ++I LVEDD  I N ++  L   G+ V   + + EA+ +  F Y + ++LVILD+MLPG 
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTK--F-YENTYQLVILDIMLPGM  59

Query  60   DGVTACSFLRE-RG-FSAPILMLTALSEEEEKVKGLDSGADDYLTKPFGIKEllariral  117
            +G     +LRE R+   +PILM+TALS++E++++++D+ ADDY+TKPF ++ LL R+ AL
Sbjct  60   NGH---ELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEAL  116

Query  118  lrrSERGFTRE---GEFRFTDEG--VVVEGREVKLTRKEKEILKVLVENRGKAVSKEEIV  172
            LRRS  ++++E   G + +  E+  V+ +G E+ LTRKE EIL +LV+N+G++++ E I+
Sbjct  117  LRRSG-ALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIIL  175

Query  173  AKVWKGE-QVNKRVVDVHVKHLRDKLGDR-IKTVWGVGYKV  211
            +++W  + + +   V+ H+K+LR KL +  IKT++GVGY++
Sbjct  176  SRIWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRL  216

364) Desku_2044 in NC_015573


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 142/224 (64%), Gaps = 8/224 (3%)

Query  1    MRILVVEDETTLANTLARCLREEGYATDIAYDGEEGIA-FAETVDYDLIILDLMLPRLDG  59
            +RIL+VED+  + NT+   L E GY  D   DG+E+ + F E   Y+L+ILD+MLP ++G
Sbjct  3    IRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENT-YQLVILDIMLPGMNG  61

Query  60   MEVIRRLRNERIDTPVLMLTARDTVADKVRGLDAGADDYLTKPFalaellarvrallrre  119
             E++R +R  + DTP+LM+TA     +++R++DA ADDY+TKPF +  LL RV ALLRR 
Sbjct  62   HELLREFRA-KNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  120  SANKSTVLQVGDLVMDTVSRRVRRGDREINLTNKEHALLEYLMRNPNRVLTRTQIAEHVW  179
            +A    + +VG L +      V  ++ E+ LT KE  +L  L++N  R LT+  I  ++W
Sbjct  121  GALAKEI-RVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW  179

Query  180  DYDFSGMSNIVDVYIRYLRRKIDDNFEPKLLYTVRGSGYCLREP  223
            +YDF G ++ V+  I+ LR K+ +N    ++ T+RG GY L E+
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPEN----IIKTIRGVGYRLEES  219

365) LMKG_02720 in NC_017546


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 76/182 (42%), Positives = 112/182 (62%), Gaps = 13/182 (7%)

Query  11   LVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMVKPFNPL  70
            LVILDIM+P MNG E+ R  R +   TPILM++A ++D+++I ++ + ADDY+ KPF+  
Sbjct  49   LVILDIMLPGMNGHELLREFRAKND-TPILMMTALSDDENQIRAFDAEADDYVTKPFKMQ  107

Query  71   ELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVGGKELHLTTSEFDILFL  130
             L  RV A+LRR   +++        + +G + +      V  +G EL LT  EF+IL+L
Sbjct  108  ILLKRVEALLRRSGALAKE-------IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLL  160

Query  131  LASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENVIKTIWGVGYK  190
            L  + GR ++ E I+ +IW     G + TV  HI NLR KL      EN+IKTI+GVGY+
Sbjct  161  LVQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKL-----PENIIKTIRGVGYR  215

Query  191  IE  192
            +E
Sbjct  216  LE  217

366) SFUL_3754 in NC_021177


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  103 bits (373),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 71/175 (41%), Positives = 108/175 (62%), Gaps = 10/175 (5%)

Query  68   VVLDVMLPDMDGLAVLGRIRREYSDVPVLFLTARDAVEDRIAGLTAGGDDYVTKPFSLEE  127
            V+LD+MLP+M+G  +L  +R   +D P+L +TA    E++I ++ A +DDYVTKPF ++ 
Sbjct  50   VILDIMLPGMNGHELLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQI  108

Query  128  VVARLRGLIRRSGTALAAERSQSTLTVGDLVLDEDSHEVSRGGNAIHLTATEFELLRFLM  187
            ++ R+ +L+RRSG ALA E     + VG L L  +   V  +G  + LT  EFE+L +L+
Sbjct  109  LLKRVEALLRRSG-ALAKE-----IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLV  162

Query  188  RNPRRVLSKAQILDRVWNYDFGGQANVVELYISYLRKKIDAGRTPMIHTRRGAGY  242
            +N  R L+   IL R+W YDF G+++ V+  I  LR K+      +I T RG GY
Sbjct  163  QNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPEN---IIKTIRGVGY  214

367) Ethha_1035 in NC_014828


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  102 bits (370),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 90/221 (41%), Positives = 142/221 (65%), Gaps = 11/221 (4%)

Query  3    RLLVVEDDPALVTGLRYSMEKDGFQVRTAGSVREGWQAFSQDRPDLVVLDVGLPDGTGFD  62
            R+L+VEDD  +   +R  +   G+QV +     E+   F ++  +LV+LD+ LP+  G +
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  63   LCRQIRVENGTPILFLTACDEETQVVMGLDMGGDDYITKPFrlrellsrvrallrrSADK  122
            L R++R  N+TPIL +TA  ++ + + ++D  +DDY+TKPF+++ LL RV ALLRRS+  
Sbjct  64   LLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGAL  123

Query  123  PVKTLVSGAVTLDTEE-AHVCRNGEEISLTPAEYRLLRLLMQNEGRTLTREQLLDTLWDS  181
            + K +  G +TL  E+ + +C +G E++LT  E+ +L LL+QN GRTLT+E +L  +W  
Sbjct  124  A-KEIRVGRLTLLPEDFTVLC-DGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIW--  179

Query  182  GGDF-VDENTLSVYIRRLRAKIEDNPSSPVHIHTVRGVGYR  221
            G DF  D +T+   I+ LRAK+ +N      I T+RGVGYR
Sbjct  180  GYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGYR  215

368) COB47_1067 in NC_014392


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  102 bits (368),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 155/227 (69%), Gaps = 14/227 (6%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGVQALEILKNNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L   GY+      G +A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNRDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R + DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  124  SLKPEVEDKV-KFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQ  182
            +L  E+  +V ++  +  DF   TV  +  +++L+ KEFE+L LL++NKGR L +++IL 
Sbjct  122  ALAKEI--RVGRLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  RVWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            R+WGY+F+GD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

369) Calow_1266 in NC_014657


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  101 bits (366),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 155/227 (69%), Gaps = 14/227 (6%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGVQALEILKNSKVDLVILDIMMSDKDGYEI  63
            IL+V+D++HI + ++  L   GY+      G +A   + ++  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNRDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R + DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  124  SLKPEVEDKV-KFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQ  182
            +L  E+  +V ++  +  DF   TV  +  +++L+ KEFE+L LL++NKGR L +++IL 
Sbjct  122  ALAKEI--RVGRLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  RVWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            R+WGY+F+GD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

370) Calhy_1249 in NC_014652


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 92/227 (41%), Positives = 156/227 (69%), Gaps = 14/227 (6%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGLQALEILKHNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L   GY+      G +A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNKDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R ++DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  124  SLKPEVEDKV-KFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQ  182
            +L  E+  +V ++  +  DF   TV  +  +++L+ KEFE+L LL++NKGR L +++IL 
Sbjct  122  ALAKEI--RVGRLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILS  176

Query  183  RVWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            R+WGY+F+GD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  177  RIWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

371) Amir_1933 in NC_013093


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score =  100 bits (361),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 140/219 (64%), Gaps = 6/219 (2%)

Query  20   VLLVEDDEHIRQALGLALGDEGFGVTDAVSGEEAlrlldrrvfdvvlldlslPGVDGLEV  79
            +LLVEDD+HI +++   L++ G+ V     G+EA   +    +++V+LD+ LPG++G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  80   CRVLRARGDLPIIIVTARADTADVIAGLEAGADDYVTKPLVagelaarirallrrrgggg  139
             R +RA+ D PI+++TA +D  + I +++A ADDYVTKP+    L  R+ ALLRR G+ +
Sbjct  65   LREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGALA  124

Query  140  eealrFGDLEVRAGEGVVLRAGDEVHLTRTEFRLLVELASAAGRVVTREQLLQRVWGYDY  199
             E    G L + + +  VL  G E+ LTR EF +L+ L    GR +T+E +L R+WGYD+
Sbjct  125  KEIRV-GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDF  183

Query  200  FGDTRLLDVHIRRLRRKVEQNPDDPALVLTVRGAGYRLD  238
             GD   ++ HI+ LR K+ +N     ++ T+RG GYRL+
Sbjct  184  EGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLE  217

372) Fphi_1209 in NC_010336


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 99.1 bits (357),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 80/198 (41%), Positives = 127/198 (65%), Gaps = 9/198 (4%)

Query  23   EGLIVNLVSDGEAAQT-FIESGLYDIVVLDIGMPIKTGLEVLRNVRNKGIKVPIILLTAR  81
             G  V+  +DG+ A T F E+  Y++V+LDI +P   G E+LR+ R K    PI+++TA 
Sbjct  25   AGYQVDACTDGNEAYTKFYENT-YQLVILDIMLPGMNGHELLREFRAKN-DTPILMMTAL  82

Query  82   DGLEDRIKGLDLGADDYLTKPFELKELVARIKAISRRIDTRSGKSTKEEIKFGDYSFNPS  141
             + E++I+++D  ADDY+TKPF ++ L+ R+ A+ RR    SG  +KE I+ G  ++ P 
Sbjct  83   SDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR----SGALAKE-IRVGRLTLLPE  137

Query  142  SETVTKDGVIIPVSKKELALLAILVQNAGRVVPKTQLLEEVYSTDKEMDTNTLEVHMHNL  201
              TV  DG  +P+++KE+ +L +LVQN GR +    +L  + + D E D +T++ H+ NL
Sbjct  138  DFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNL  197

Query  202  RKKINIPNFIQTIRGVGY  219
            R K+   N+I+TIRGVGY
Sbjct  198  RAKLP-ENIIKTIRGVGY  214

373) Calkr_1472 in NC_014721


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 152/226 (68%), Gaps = 12/226 (5%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGVLALEILKHNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L   GY+      G  A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNRDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R + DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  124  SLKPEVEDKVKFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQR  183
            +L  E+    ++  +  DF   TV  +  +++L+ KEFE+L LL++NKGR L +++IL R
Sbjct  122  ALAKEIRVG-RLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  184  VWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            +WGY+F+GD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

374) Calla_0857 in NC_015949


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 91/226 (41%), Positives = 152/226 (68%), Gaps = 12/226 (5%)

Query  4    ILIVDDEQHILELLKFNLRKEGYNTFEADSGVLALEILKHNKVDLVILDIMMSDKDGYEV  63
            IL+V+D++HI + ++  L   GY+      G  A   + +N  +LVILDIM+++ +G E+
Sbjct  5    ILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHEL  64

Query  64   LKEIRFNRDTKNLPVILLSAKSEEIDKILGLELGADDYITKPFSvkelvvrvkallrrve  123
            L+E+R + DT   P+++++A S++ ++I +++  ADDY+TKPF ++ L+ RV ALLRR  
Sbjct  65   LREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSG  121

Query  124  SLKPEVEDKVKFGDVEVDFSKRTVKKNNQDVslsfkefellkllIENKGRVLDRDFILQR  183
            +L  E+    ++  +  DF   TV  +  +++L+ KEFE+L LL++NKGR L +++IL R
Sbjct  122  ALAKEIRVG-RLTLLPEDF---TVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSR  177

Query  184  VWGYEFDGDTRTVDVHIRFLRRKLEDDEKNPRYIETVRGVGYRFNE  229
            +WGY+F+GD  TV+ HI+ LR KL ++      I T+RGVGYR++E
Sbjct  178  IWGYDFEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEE  218

375) F7308_0805 in NC_015696


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 80/198 (41%), Positives = 127/198 (65%), Gaps = 9/198 (4%)

Query  23   EGLIVNLVSDGEAAQT-FVESGLYDIVVLDIGMPIKTGLEVLRNVRNKGIKVPIILLTAR  81
             G  V+  +DG+ A T F E+  Y++V+LDI +P   G E+LR+ R K    PI+++TA 
Sbjct  25   AGYQVDACTDGNEAYTKFYENT-YQLVILDIMLPGMNGHELLREFRAKN-DTPILMMTAL  82

Query  82   DGLEDRIKGLDLGADDYLTKPFELKELVARIKAISRRIDTRSGKSTKEEIKFGDYSFNPS  141
             + E++I+++D  ADDY+TKPF ++ L+ R+ A+ RR    SG  +KE I+ G  ++ P 
Sbjct  83   SDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR----SGALAKE-IRVGRLTLLPE  137

Query  142  SETVTKDGVIIPVSKKELALLAILVQNAGRVVPKTQLLEEVYSTDKEMDTNTLEVHMHNL  201
              TV  DG  +P+++KE+ +L +LVQN GR +    +L  + + D E D +T++ H+ NL
Sbjct  138  DFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNL  197

Query  202  RKKINIPNFIQTIRGVGY  219
            R K+   N+I+TIRGVGY
Sbjct  198  RAKLP-ENIIKTIRGVGY  214

376) EAT1b_1752 in NC_012673


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 98.6 bits (355),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 92/228 (41%), Positives = 140/228 (62%), Gaps = 14/228 (6%)

Query  1    MDRTILVVDDEQPIADILKFKLEKEGYQVHVAYDGEEALVKVEEIQpdlilldimlplKD  60
            M   IL+V+D++ I + ++  L   GYQV+   DG+EA  K  E   +L++LDIMLP  +
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN  60

Query  61   GMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSSRELLARVKANMRRH  120
            G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A +RR 
Sbjct  61   GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR-  119

Query  121  ATAPAPEAKGANANDIVIGDLTIHPDSYMVTKRDEKIELTHREFELIHYLAQNIGQVMTR  180
                     GA A++I +G LT+ P+ + V   +  + LT++EFE++  L QN G+ +T+
Sbjct  120  --------SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTH  171

Query  181  EHLLQTVWGYDYFGdvrtvdvtvrrlrEKVEDNPSTPTYIITRRGVGY  228
            E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  172  EIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

377) PM3016_6981 in NC_016935


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 144/224 (65%), Gaps = 8/224 (3%)

Query  1    MNILLAEDDDRLGELVAHMLKKKAGYRVDWVMTGEdaydyakaahydIVILDWMMPGGDG  60
            + ILL EDDD++ + V   L   AGY+VD    G++AY       Y++VILD M+PG +G
Sbjct  3    IRILLVEDDDHICNTVRAFLAE-AGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  61   VEACRRLRRSGYTGAVLMLTAKDALQDRIEGLDAGADDYLVKPFEIDEllarlralsrrN  120
             E  R +R      ++LM+TA    +++I ++DA ADDY+ KPF ++ LL R+ AL RR+
Sbjct  62   HELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  YAPLKEETVTIGGILLNRTGCTVQLGEETIQLTPREFQLLDLLACNKGQVLSREVLLDRI  180
             ++L  E + +G + L   + TV  +   + LT +EF++L LL  NKG+ L++E++L RI
Sbjct  121  -GALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDAEVSAKTVDATVKLLRKKLEPLGGQELVQSVRGVGYKLED  224
            WGYD E  + TV++ +K LR KL     +++++++RGVGY+LE+
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

378) B2K_35215 in NC_017672


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 144/224 (65%), Gaps = 8/224 (3%)

Query  1    MNILLAEDDDRLGELVAHMLKKKAGYRVDWVMTGEdaydyakaahydIVILDWMMPGGDG  60
            + ILL EDDD++ + V   L   AGY+VD    G++AY       Y++VILD M+PG +G
Sbjct  3    IRILLVEDDDHICNTVRAFLAE-AGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  61   VEACRRLRRSGYTGAVLMLTAKDALQDRIEGLDAGADDYLVKPFEIDEllarlralsrrN  120
             E  R +R      ++LM+TA    +++I ++DA ADDY+ KPF ++ LL R+ AL RR+
Sbjct  62   HELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  YAPLKEETVTIGGILLNRTGCTVQLGEETIQLTPREFQLLDLLACNKGQVLSREVLLDRI  180
             ++L  E + +G + L   + TV  +   + LT +EF++L LL  NKG+ L++E++L RI
Sbjct  121  -GALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDAEVSAKTVDATVKLLRKKLEPLGGQELVQSVRGVGYKLED  224
            WGYD E  + TV++ +K LR KL     +++++++RGVGY+LE+
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

379) KNP414_07428 in NC_015690


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 144/224 (65%), Gaps = 8/224 (3%)

Query  1    MNILLAEDDDRLGELVAHMLKKKAGYRVDWVMTGEdaydyakaahydIVILDWMMPGGDG  60
            + ILL EDDD++ + V   L   AGY+VD    G++AY       Y++VILD M+PG +G
Sbjct  3    IRILLVEDDDHICNTVRAFLAE-AGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNG  61

Query  61   VEACRRLRRSGYTGAVLMLTAKDALQDRIEGLDAGADDYLVKPFEIDEllarlralsrrN  120
             E  R +R      ++LM+TA    +++I ++DA ADDY+ KPF ++ LL R+ AL RR+
Sbjct  62   HELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS  120

Query  121  YAPLKEETVTIGGILLNRTGCTVQLGEETIQLTPREFQLLDLLACNKGQVLSREVLLDRI  180
             ++L  E + +G + L   + TV  +   + LT +EF++L LL  NKG+ L++E++L RI
Sbjct  121  -GALAKE-IRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRI  178

Query  181  WGYDAEVSAKTVDATVKLLRKKLEPLGGQELVQSVRGVGYKLED  224
            WGYD E  + TV++ +K LR KL     +++++++RGVGY+LE+
Sbjct  179  WGYDFEGDGSTVHTHIKNLRAKL----PENIIKTIRGVGYRLEE  218

380) Ent638_3617 in NC_009436


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 71/175 (41%), Positives = 111/175 (64%), Gaps = 2/175 (1%)

Query  43   GEYSLVILDLGLPDKDGATLLSQWRRRGVDNPVLILTARDAIEDRIHGLDSGADDYLVKP  102
              Y LVILD+ LP+ +G  LL + R +  D P+L++TA    E++I+++D+ ADDY+ KP
Sbjct  45   NTYQLVILDIMLPGMNGHELLREFRAKN-DTPILMMTALSDDENQIRAFDAEADDYVTKP  103

Query  103  FalaelqararalirrYQGHSDNQVVDGDLTLNLQTQQVLCDSHPVEVTPKEFALLTRLI  162
            F +  L  R  AL+RR  G   +++  G LTL  +   VLCD+  + +T KEF +L  L+
Sbjct  104  FKMQILLKRVEALLRR-SGALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLV  162

Query  163  MRSGQTVHRETLQQDIYSWQDDPGSNTLEVHIHNLRRKLGKDRIKTVRGVGYRLE  217
               G+T+ +E +   I + + + +++T++ HI NLR KL  + IKT+RGVGYRLE
Sbjct  163  QNKGRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLE  217

381) FMG_0591 in NC_010376


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 93.9 bits (337),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 74/169 (44%), Positives = 114/169 (68%), Gaps = 7/169 (4%)

Query  70   PGKSGLEILKEIRNNEKTKNIPVMMLTAKTTEYDKIVGLDSGADDYMIKPFSIMEllarv  129
            PG +G E+L+E+R ++ T   P++M+TA + + ++I ++D+ ADDY+ KPF +  LL RV
Sbjct  57   PGMNGHELLREFRAKNDT---PILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRV  113

Query  130  rallrrsslsKTKSKIIYKNIELDYDKRTVSVDGENVELTYKEFELLYYLLSNVGKVLTR  189
             ALLRRS+      ++    + L  +  TV  DG ++ LT KEFE+L  L+ N G+ LT+
Sbjct  114  EALLRRSGALAKEIRV--GRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTH  171

Query  190  ENIMTKIWGFDFEGESRTVDVHIATLRQKLKNASSIIKTIRNLGYKAGE  238
            E I+++IWG+DFEG++ TV+ HI  LR KL  + +IIKTIR +GY+  E
Sbjct  172  EIILSRIWGYDFEGDGSTVHTHIKNLRAKL--PENIIKTIRGVGYRLEE  218

382) GC56T3_3456 in NC_014206


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 139/229 (61%), Gaps = 16/229 (6%)

Query  1    MEKRILVVDDEKPIADILQFNLQKEGYEV-ICAYDGEEALQKVEETmpdlilldimlplK  59
            M  RIL+V+D+  I + ++  L   GY+V  C+ DG+EA  K  E   +L++LDIMLP  
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACT-DGNEAYTKFYENTYQLVILDIMLPGM  59

Query  60   DGMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRR  119
            +G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A LRR
Sbjct  60   NGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  120  HAQTANQEEGENETNEIVIGPLVIRPDAYVVQKRGETIELTHREFELLHYLAKHIGQVMT  179
             +  A         +EI +G L + P+ + V   G  + LT++EFE+L  L ++ G+ +T
Sbjct  120  SGALA---------KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  REHLLQTVWgydyygdvrtvdvtvrrLREKIEDNPSHPNWIVTRRGVGY  228
            +E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

383) walR in NC_020210


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 139/229 (61%), Gaps = 16/229 (6%)

Query  1    MEKRILVVDDEKPIADILQFNLQKEGYEV-ICAYDGEEALQKVEETmpdlilldimlplK  59
            M  RIL+V+D+  I + ++  L   GY+V  C+ DG+EA  K  E   +L++LDIMLP  
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACT-DGNEAYTKFYENTYQLVILDIMLPGM  59

Query  60   DGMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRR  119
            +G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A LRR
Sbjct  60   NGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  120  HAQTANQEEGENETNEIVIGPLVIRPDAYVVQKRGETIELTHREFELLHYLAKHIGQVMT  179
             +  A         +EI +G L + P+ + V   G  + LT++EFE+L  L ++ G+ +T
Sbjct  120  SGALA---------KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  REHLLQTVWgydyygdvrtvdvtvrrLREKIEDNPSHPNWIVTRRGVGY  228
            +E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

384) GK3474 in NC_006510


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 139/229 (61%), Gaps = 16/229 (6%)

Query  1    MEKRILVVDDEKPIADILQFNLQKEGYEV-ICAYDGEEALQKVEETmpdlilldimlplK  59
            M  RIL+V+D+  I + ++  L   GY+V  C+ DG+EA  K  E   +L++LDIMLP  
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACT-DGNEAYTKFYENTYQLVILDIMLPGM  59

Query  60   DGMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRR  119
            +G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A LRR
Sbjct  60   NGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  120  HAQTANQEEGENETNEIVIGPLVIRPDAYVVQKRGETIELTHREFELLHYLAKHIGQVMT  179
             +  A         +EI +G L + P+ + V   G  + LT++EFE+L  L ++ G+ +T
Sbjct  120  SGALA---------KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  REHLLQTVWgydyygdvrtvdvtvrrLREKIEDNPSHPNWIVTRRGVGY  228
            +E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

385) GTCCBUS3UF5_38910 in NC_016593


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 91.5 bits (328),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 139/229 (61%), Gaps = 16/229 (6%)

Query  4    MEKRILVVDDEKPIADILQFNLQKEGYEV-ICAYDGEEALQKVEETmpdlilldimlplK  62
            M  RIL+V+D+  I + ++  L   GY+V  C+ DG+EA  K  E   +L++LDIMLP  
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACT-DGNEAYTKFYENTYQLVILDIMLPGM  59

Query  63   DGMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRR  122
            +G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A LRR
Sbjct  60   NGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  123  HAQTANQEEGENETNEIVIGPLVIRPDAYVVQKRGETIELTHREFELLHYLAKHIGQVMT  182
             +  A         +EI +G L + P+ + V   G  + LT++EFE+L  L ++ G+ +T
Sbjct  120  SGALA---------KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  183  REHLLQTVWgydyygdvrtvdvtvrrLREKIEDNPSHPNWIVTRRGVGY  231
            +E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

386) GYMC52_3572 in NC_014915


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 91.2 bits (327),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 139/229 (61%), Gaps = 16/229 (6%)

Query  1    MEKRILVVDDEKPIADILQFNLQKEGYEV-ICAYDGEEALQKVEETmpdlilldimlplK  59
            M  RIL+V+D+  I + ++  L   GY+V  C+ DG+EA  K  E   +L++LDIMLP  
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACT-DGNEAYTKFYENTYQLVILDIMLPGM  59

Query  60   DGMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRR  119
            +G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A LRR
Sbjct  60   NGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  120  HAQTANQEEGENETNEIVIGPLVIRPDAYIVQKRGETIELTHREFELLHYLAKHIGQVMT  179
             +  A         +EI +G L + P+ + V   G  + LT++EFE+L  L ++ G+ +T
Sbjct  120  SGALA---------KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  REHLLQTVWgydyygdvrtvdvtvrrLREKIEDNPSHPNWIVTRRGVGY  228
            +E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

387) GYMC61_3538 in NC_013411


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 91.2 bits (327),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 139/229 (61%), Gaps = 16/229 (6%)

Query  1    MEKRILVVDDEKPIADILQFNLQKEGYEV-ICAYDGEEALQKVEETmpdlilldimlplK  59
            M  RIL+V+D+  I + ++  L   GY+V  C+ DG+EA  K  E   +L++LDIMLP  
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACT-DGNEAYTKFYENTYQLVILDIMLPGM  59

Query  60   DGMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRR  119
            +G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A LRR
Sbjct  60   NGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  120  HAQTANQEEGENETNEIVIGPLVIRPDAYIVQKRGETIELTHREFELLHYLAKHIGQVMT  179
             +  A         +EI +G L + P+ + V   G  + LT++EFE+L  L ++ G+ +T
Sbjct  120  SGALA---------KEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  REHLLQTVWgydyygdvrtvdvtvrrLREKIEDNPSHPNWIVTRRGVGY  228
            +E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

388) phoB in NC_020555


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 87.8 bits (314),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 115/176 (66%), Gaps = 7/176 (3%)

Query  47   VVLDVMLPQEDGLSVLHKMRQNHKSKNIPVIMLTALGSEFDKIKGLDSGADDYLTKPFSA  106
            V+LD+MLP  +G  +L+  R ++   + P++M+TAL+ + ++I+++D+ ADDY+TKPF  
Sbjct  50   VILDIMLPGMNGHELLREFRAKN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKM  106

Query  107  LELIARIKALLRRSHTQNDCEMSYGDLKYSKTIHSVSIGGESlhltlkefellgllMSST  166
              L+ R+ ALLRRS +    E+  G L       +V  +G  L LT KEFE+L LL+ + 
Sbjct  107  QILLKRVEALLRRSGALAK-EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNK  165

Query  167  NRVFSREELLEIIWGYNISG-TRTIDIHINTLRSKLGKYGKHIKTIRGVGYQFNTN  221
             R +++E +L  IWGY++ G   T++ HI+ LR+KL    + IKTIRGVGY+++ +
Sbjct  166  GRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRLEES  219

389) HCN_0446 in NC_017761


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 87.8 bits (314),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 115/176 (66%), Gaps = 7/176 (3%)

Query  47   VVLDVMLPQEDGLSVLHKMRQNHKSKNIPVIMLTALGSEFDKIKGLDGGADDYLTKPFSA  106
            V+LD+MLP  +G  +L+  R ++   + P++M+TAL+ + ++I+++D+ ADDY+TKPF  
Sbjct  50   VILDIMLPGMNGHELLREFRAKN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKM  106

Query  107  LELIARIKALLRRSHTQNDCEMSYGDLKYSKTIHSVSIGGESlhltlkefellgllMSST  166
              L+ R+ ALLRRS +    E+  G L       +V  +G  L LT KEFE+L LL+ + 
Sbjct  107  QILLKRVEALLRRSGALAK-EIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNK  165

Query  167  NRVFSREELLEIIWGYNISG-TRTIDIHINTLRSKLGKYGKHIKTIRGVGYQFNTN  221
             R +++E +L  IWGY++ G   T++ HI+ LR+KL    + IKTIRGVGY+++ +
Sbjct  166  GRTLTHEIILSRIWGYDFEGDGSTVHTHIKNLRAKLP--ENIIKTIRGVGYRLEES  219

390) yycF in NC_009328


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 86.5 bits (309),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 139/229 (61%), Gaps = 16/229 (6%)

Query  1    MEKRILVVDDEKPIADILQFNLQKEGYEV-ICAYDGEEALQKVEETmpdlilldimlplK  59
            M  RIL+V+D+  I + ++  L   GY+V  C+ DG+EA  K  E   +L++LDIMLP  
Sbjct  1    MSIRILLVEDDDHICNTVRAFLAEAGYQVDACT-DGNEAYTKFYENTYQLVILDIMLPGM  59

Query  60   DGMEVCREVRKKYDMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRR  119
            +G E+ RE R K D PI+M+TA   + +++ +++  ADDYVTKPF  + LL RV A LRR
Sbjct  60   NGHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRR  119

Query  120  HaqtatqeeeesetneIVVGPLVIRPDAYVVQKRGETIELTHREFELLHYLAKHIGQVMT  179
                       + ++EI VG L + P+ + V   G  + LT++EFE+L  L ++ G+ +T
Sbjct  120  S---------GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLT  170

Query  180  REHLLQTVWgydyygdvrtvdvtvrrLREKIEDNPSHPSWIVTRRGVGY  228
            +E +L  +WGYD+ GD  TV+  ++ LR K+ +N      I T RGVGY
Sbjct  171  HEIILSRIWGYDFEGDGSTVHTHIKNLRAKLPENI-----IKTIRGVGY  214

391) Ocepr_0547 in NC_014761


> NC_021994_R1|48|G48|529233442|YP_008394254.1|Enterococcus_faecium_Aus0085|+|46055..46714|vanRB|EFAU085_00730|DNA-binding 
response regulator VanRB
Length=219

 Score = 85.2 bits (304),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 89/222 (41%), Positives = 146/222 (66%), Gaps = 9/222 (4%)

Query  3    KILIVDDDPAIREILRAYLSHEGYELSEaadgvsalal--apaadlvvldlmlPEMDGLE  60
            +IL+V+DD  I + +RA+L++ GY++   +DG  A +     + +LV+LD+MLP M+G E
Sbjct  4    RILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMNGHE  63

Query  61   VARHLRRDFPELPILMLTArgeeeervrgfeegADDYVTKPFSPRElvarvrallrrSGI  120
            + R++R    + PILM+TA +++E+++R+F+  ADDYVTKPF  + L+ RV ALLRRSG 
Sbjct  64   LLREFRAK-NDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRSGA  122

Query  121  HDRLV-YGDLEIVPGSREVYLAGRPVELSKLEFDLLLTLAQHPGMVFSRERLLERVWGSD  179
              + +  G L ++P    V   G  + L++ EF++LL L Q+ G  +++E +L R+WG D
Sbjct  123  LAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWGYD  182

Query  180  FFGVERVVDVHVASLRKRLGDEPDRPRFIETVRGVGYRFKET  221
            F G    V+ H+ +LR +L ++     +I T+RGVGYR+ E+
Sbjct  183  FEGDGSTVHTHIKNLRAKLPEN-----IIKTIRGVGYRLEES  219